BLASTX nr result

ID: Cocculus23_contig00040327 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00040327
         (280 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006392898.1| hypothetical protein EUTSA_v10011490mg [Eutr...    58   1e-06
ref|XP_002894391.1| hypothetical protein ARALYDRAFT_474388 [Arab...    58   2e-06
ref|XP_006307371.1| hypothetical protein CARUB_v10008996mg, part...    57   3e-06

>ref|XP_006392898.1| hypothetical protein EUTSA_v10011490mg [Eutrema salsugineum]
           gi|557089476|gb|ESQ30184.1| hypothetical protein
           EUTSA_v10011490mg [Eutrema salsugineum]
          Length = 438

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/44 (59%), Positives = 32/44 (72%)
 Frame = -1

Query: 277 LLSPSIPFPRSFVALGSSRGSDIWSVQRIVGWKPCKWWIEARPT 146
           LLSPS  F +  V  GSS GSDIWSV+RI+ W+PCKWW++   T
Sbjct: 24  LLSPSPHFLQIQVPSGSSVGSDIWSVKRIMEWRPCKWWLQGHLT 67


>ref|XP_002894391.1| hypothetical protein ARALYDRAFT_474388 [Arabidopsis lyrata subsp.
           lyrata] gi|297340233|gb|EFH70650.1| hypothetical protein
           ARALYDRAFT_474388 [Arabidopsis lyrata subsp. lyrata]
          Length = 438

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 29/49 (59%), Positives = 33/49 (67%), Gaps = 5/49 (10%)
 Frame = -1

Query: 277 LLSPS-----IPFPRSFVALGSSRGSDIWSVQRIVGWKPCKWWIEARPT 146
           LLSPS     IPFP      GSS GSDIWSV+RIV W+PCKWW++   T
Sbjct: 24  LLSPSPHILQIPFPS-----GSSVGSDIWSVKRIVEWRPCKWWLQGHLT 67


>ref|XP_006307371.1| hypothetical protein CARUB_v10008996mg, partial [Capsella rubella]
           gi|482576082|gb|EOA40269.1| hypothetical protein
           CARUB_v10008996mg, partial [Capsella rubella]
          Length = 482

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/49 (57%), Positives = 33/49 (67%), Gaps = 5/49 (10%)
 Frame = -1

Query: 277 LLSPS-----IPFPRSFVALGSSRGSDIWSVQRIVGWKPCKWWIEARPT 146
           LLSPS     IPFP      GSS GSDIWSV+RI+ W+PCKWW++   T
Sbjct: 68  LLSPSPHILQIPFPS-----GSSVGSDIWSVKRIMEWRPCKWWLQGHLT 111


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