BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00040286
         (256 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containi...   137   1e-30
emb|CBI31119.3| unnamed protein product [Vitis vinifera]              137   1e-30
ref|XP_007014547.1| Pentatricopeptide repeat protein isoform 2 [...   136   3e-30
ref|XP_007014546.1| Pentatricopeptide repeat protein isoform 1 [...   136   3e-30
gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsu...   135   6e-30
ref|XP_007221475.1| hypothetical protein PRUPE_ppa004164mg [Prun...   130   1e-28
gb|EXB87349.1| Serine/threonine-protein phosphatase PP2A-4 catal...   129   5e-28
ref|XP_006372460.1| hypothetical protein POPTR_0017s01850g [Popu...   128   7e-28
ref|XP_006481967.1| PREDICTED: pentatricopeptide repeat-containi...   124   2e-26
ref|XP_006430418.1| hypothetical protein CICLE_v10011492mg [Citr...   124   2e-26
ref|XP_004295922.1| PREDICTED: pentatricopeptide repeat-containi...   122   7e-26
ref|XP_002526196.1| pentatricopeptide repeat-containing protein,...   121   1e-25
gb|AFW74147.1| hypothetical protein ZEAMMB73_269656 [Zea mays]        115   8e-24
ref|XP_002453091.1| hypothetical protein SORBIDRAFT_04g038305 [S...   111   1e-22
ref|XP_004954507.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22
ref|XP_003573157.1| PREDICTED: pentatricopeptide repeat-containi...   110   3e-22
gb|EMT03787.1| hypothetical protein F775_12207 [Aegilops tauschii]    107   2e-21
ref|XP_006649201.1| PREDICTED: pentatricopeptide repeat-containi...   106   4e-21
gb|EXB70668.1| hypothetical protein L484_023854 [Morus notabilis]     105   5e-21
ref|NP_001048611.1| Os02g0830000 [Oryza sativa Japonica Group] g...   102   5e-20

>ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 537

 Score =  137 bits (346), Expect = 1e-30
 Identities = 65/83 (78%), Positives = 74/83 (89%)
 Frame = -3

Query: 254 GRAGALEEAMKVVREMPMEPDSYVLGALLNACKMHGDVEFGEEAAERLVEQGLDHGGVHV 75
           GRAG LE+A +VVREMP+EPDSYVLGALLNAC++HGDVE G+E  E L E+ LDHGGVHV
Sbjct: 393 GRAGMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDVELGKETVECLAERSLDHGGVHV 452

Query: 74  LLSNIYASANRWEDVAKVRKEME 6
           LLSN+YASAN+WEDVAKVRK ME
Sbjct: 453 LLSNMYASANQWEDVAKVRKGME 475


>emb|CBI31119.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score =  137 bits (346), Expect = 1e-30
 Identities = 65/83 (78%), Positives = 74/83 (89%)
 Frame = -3

Query: 254 GRAGALEEAMKVVREMPMEPDSYVLGALLNACKMHGDVEFGEEAAERLVEQGLDHGGVHV 75
           GRAG LE+A +VVREMP+EPDSYVLGALLNAC++HGDVE G+E  E L E+ LDHGGVHV
Sbjct: 368 GRAGMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDVELGKETVECLAERSLDHGGVHV 427

Query: 74  LLSNIYASANRWEDVAKVRKEME 6
           LLSN+YASAN+WEDVAKVRK ME
Sbjct: 428 LLSNMYASANQWEDVAKVRKGME 450


>ref|XP_007014547.1| Pentatricopeptide repeat protein isoform 2 [Theobroma cacao]
           gi|508784910|gb|EOY32166.1| Pentatricopeptide repeat
           protein isoform 2 [Theobroma cacao]
          Length = 511

 Score =  136 bits (342), Expect = 3e-30
 Identities = 64/82 (78%), Positives = 73/82 (89%)
 Frame = -3

Query: 254 GRAGALEEAMKVVREMPMEPDSYVLGALLNACKMHGDVEFGEEAAERLVEQGLDHGGVHV 75
           GRAG  EEA K+VREMPMEPDSYVLGALLN+C+MHGDVE G+E  E LVE+GLDHGGVHV
Sbjct: 366 GRAGLFEEANKLVREMPMEPDSYVLGALLNSCRMHGDVELGKETVESLVERGLDHGGVHV 425

Query: 74  LLSNIYASANRWEDVAKVRKEM 9
           LLSN+YAS+N+W+ V KVRKEM
Sbjct: 426 LLSNMYASSNQWDWVVKVRKEM 447


>ref|XP_007014546.1| Pentatricopeptide repeat protein isoform 1 [Theobroma cacao]
           gi|508784909|gb|EOY32165.1| Pentatricopeptide repeat
           protein isoform 1 [Theobroma cacao]
          Length = 537

 Score =  136 bits (342), Expect = 3e-30
 Identities = 64/82 (78%), Positives = 73/82 (89%)
 Frame = -3

Query: 254 GRAGALEEAMKVVREMPMEPDSYVLGALLNACKMHGDVEFGEEAAERLVEQGLDHGGVHV 75
           GRAG  EEA K+VREMPMEPDSYVLGALLN+C+MHGDVE G+E  E LVE+GLDHGGVHV
Sbjct: 392 GRAGLFEEANKLVREMPMEPDSYVLGALLNSCRMHGDVELGKETVESLVERGLDHGGVHV 451

Query: 74  LLSNIYASANRWEDVAKVRKEM 9
           LLSN+YAS+N+W+ V KVRKEM
Sbjct: 452 LLSNMYASSNQWDWVVKVRKEM 473


>gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
           gi|227462998|gb|ACP39951.1| pentatricopeptide repeat
           protein [Gossypium hirsutum]
          Length = 532

 Score =  135 bits (340), Expect = 6e-30
 Identities = 63/82 (76%), Positives = 74/82 (90%)
 Frame = -3

Query: 254 GRAGALEEAMKVVREMPMEPDSYVLGALLNACKMHGDVEFGEEAAERLVEQGLDHGGVHV 75
           GRAG LEEA ++VREMPMEPDSYVLGALLN+C++HGDVE G+E  E LVE+GLDHGGVHV
Sbjct: 388 GRAGLLEEAKRLVREMPMEPDSYVLGALLNSCRVHGDVELGKETVESLVERGLDHGGVHV 447

Query: 74  LLSNIYASANRWEDVAKVRKEM 9
           LLSN+YAS+N+W+ V KVRKEM
Sbjct: 448 LLSNMYASSNQWDWVVKVRKEM 469


>ref|XP_007221475.1| hypothetical protein PRUPE_ppa004164mg [Prunus persica]
           gi|462418225|gb|EMJ22674.1| hypothetical protein
           PRUPE_ppa004164mg [Prunus persica]
          Length = 526

 Score =  130 bits (328), Expect = 1e-28
 Identities = 63/83 (75%), Positives = 71/83 (85%)
 Frame = -3

Query: 254 GRAGALEEAMKVVREMPMEPDSYVLGALLNACKMHGDVEFGEEAAERLVEQGLDHGGVHV 75
           GRAG LEEA KVVREMPMEPDSYVLGALLNAC++HGDVE G+E  +RL  + LDH GVHV
Sbjct: 384 GRAGMLEEANKVVREMPMEPDSYVLGALLNACRVHGDVELGKEMVKRLSGKSLDHSGVHV 443

Query: 74  LLSNIYASANRWEDVAKVRKEME 6
           LLSNIYASAN+W+DV  +RK ME
Sbjct: 444 LLSNIYASANQWDDVTVLRKGME 466


>gb|EXB87349.1| Serine/threonine-protein phosphatase PP2A-4 catalytic subunit
           [Morus notabilis]
          Length = 783

 Score =  129 bits (323), Expect = 5e-28
 Identities = 61/83 (73%), Positives = 71/83 (85%)
 Frame = -3

Query: 254 GRAGALEEAMKVVREMPMEPDSYVLGALLNACKMHGDVEFGEEAAERLVEQGLDHGGVHV 75
           GR G +EEA KVVREMP+EPDSYVLGALLNAC++HGDVE G+E    L EQGLDH GVHV
Sbjct: 384 GRVGMIEEAKKVVREMPIEPDSYVLGALLNACRVHGDVELGQEMVLCLAEQGLDHSGVHV 443

Query: 74  LLSNIYASANRWEDVAKVRKEME 6
           LLSN+YASA++W+ V KVRK+ME
Sbjct: 444 LLSNMYASADQWDFVTKVRKKME 466


>ref|XP_006372460.1| hypothetical protein POPTR_0017s01850g [Populus trichocarpa]
           gi|550319085|gb|ERP50257.1| hypothetical protein
           POPTR_0017s01850g [Populus trichocarpa]
          Length = 446

 Score =  128 bits (322), Expect = 7e-28
 Identities = 57/83 (68%), Positives = 74/83 (89%)
 Frame = -3

Query: 254 GRAGALEEAMKVVREMPMEPDSYVLGALLNACKMHGDVEFGEEAAERLVEQGLDHGGVHV 75
           GRAG +EEA +VVREMP++PDSY LGALL+AC++HGDV+ GEE  + LV++ LDHGGVHV
Sbjct: 310 GRAGKIEEAKQVVREMPLQPDSYTLGALLDACRVHGDVQLGEEMVDSLVQRCLDHGGVHV 369

Query: 74  LLSNIYASANRWEDVAKVRKEME 6
           LLSN+YASA++WED +K+RK+ME
Sbjct: 370 LLSNMYASADKWEDASKIRKKME 392


>ref|XP_006481967.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Citrus sinensis]
          Length = 546

 Score =  124 bits (310), Expect = 2e-26
 Identities = 59/83 (71%), Positives = 68/83 (81%)
 Frame = -3

Query: 254 GRAGALEEAMKVVREMPMEPDSYVLGALLNACKMHGDVEFGEEAAERLVEQGLDHGGVHV 75
           GRAG LE A KVVREMP+EPD+YVLGALLNAC++HGDV+ G+E  E LVE+ LDH GVHV
Sbjct: 392 GRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHGDVDLGKETVESLVERSLDHEGVHV 451

Query: 74  LLSNIYASANRWEDVAKVRKEME 6
           LLSNIYAS  +W  V KVR+ ME
Sbjct: 452 LLSNIYASTEQWNGVEKVRRGME 474


>ref|XP_006430418.1| hypothetical protein CICLE_v10011492mg [Citrus clementina]
           gi|557532475|gb|ESR43658.1| hypothetical protein
           CICLE_v10011492mg [Citrus clementina]
          Length = 519

 Score =  124 bits (310), Expect = 2e-26
 Identities = 59/83 (71%), Positives = 68/83 (81%)
 Frame = -3

Query: 254 GRAGALEEAMKVVREMPMEPDSYVLGALLNACKMHGDVEFGEEAAERLVEQGLDHGGVHV 75
           GRAG LE A KVVREMP+EPD+YVLGALLNAC++HGDV+ G+E  E LVE+ LDH GVHV
Sbjct: 368 GRAGMLEAAKKVVREMPIEPDNYVLGALLNACRVHGDVDLGKETVESLVERSLDHEGVHV 427

Query: 74  LLSNIYASANRWEDVAKVRKEME 6
           LLSNIYAS  +W  V KVR+ ME
Sbjct: 428 LLSNIYASTEQWNGVEKVRRGME 450


>ref|XP_004295922.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Fragaria vesca subsp. vesca]
          Length = 524

 Score =  122 bits (305), Expect = 7e-26
 Identities = 58/83 (69%), Positives = 67/83 (80%)
 Frame = -3

Query: 254 GRAGALEEAMKVVREMPMEPDSYVLGALLNACKMHGDVEFGEEAAERLVEQGLDHGGVHV 75
           GRAG LEEA KVV +MPM PDSYVLGALLNAC++HGD++ G+E  ER   Q LDH GVHV
Sbjct: 386 GRAGMLEEAKKVVTKMPMGPDSYVLGALLNACRVHGDLDLGKEMVERFTGQRLDHSGVHV 445

Query: 74  LLSNIYASANRWEDVAKVRKEME 6
           LLSNIYAS N+W+DV  +RK ME
Sbjct: 446 LLSNIYASENQWDDVTLLRKGME 468


>ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534500|gb|EEF36200.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 491

 Score =  121 bits (303), Expect = 1e-25
 Identities = 56/82 (68%), Positives = 70/82 (85%)
 Frame = -3

Query: 254 GRAGALEEAMKVVREMPMEPDSYVLGALLNACKMHGDVEFGEEAAERLVEQGLDHGGVHV 75
           GRAG LEEA K+V+EMPM+PDSYVLGALLNA +++GDVE GEE  E L +  LDH GVHV
Sbjct: 391 GRAGKLEEAKKLVKEMPMKPDSYVLGALLNASRVYGDVELGEETVESLAQLSLDHSGVHV 450

Query: 74  LLSNIYASANRWEDVAKVRKEM 9
           +LSN+YASAN+W++VA+VR+ M
Sbjct: 451 VLSNMYASANKWDEVARVRRGM 472


>gb|AFW74147.1| hypothetical protein ZEAMMB73_269656 [Zea mays]
          Length = 524

 Score =  115 bits (287), Expect = 8e-24
 Identities = 54/83 (65%), Positives = 63/83 (75%)
 Frame = -3

Query: 254 GRAGALEEAMKVVREMPMEPDSYVLGALLNACKMHGDVEFGEEAAERLVEQGLDHGGVHV 75
           GRAG L +A++ VR MPM PDSYVLGALLNAC  HGDVE GE+    L E GLDH GVHV
Sbjct: 377 GRAGQLADALEAVRSMPMRPDSYVLGALLNACAAHGDVEAGEQVVRWLAELGLDHSGVHV 436

Query: 74  LLSNIYASANRWEDVAKVRKEME 6
            LSN+YA   +WE+V KVR++ME
Sbjct: 437 QLSNMYAGWGKWEEVLKVRRDME 459


>ref|XP_002453091.1| hypothetical protein SORBIDRAFT_04g038305 [Sorghum bicolor]
           gi|241932922|gb|EES06067.1| hypothetical protein
           SORBIDRAFT_04g038305 [Sorghum bicolor]
          Length = 514

 Score =  111 bits (277), Expect = 1e-22
 Identities = 53/83 (63%), Positives = 62/83 (74%)
 Frame = -3

Query: 254 GRAGALEEAMKVVREMPMEPDSYVLGALLNACKMHGDVEFGEEAAERLVEQGLDHGGVHV 75
           GRAG L EAM+ VR M M PD+YVLGALLNAC  HGDVE GE+    L E GLDH GVHV
Sbjct: 379 GRAGLLAEAMETVRSMTMRPDAYVLGALLNACAAHGDVEAGEQVVRWLAELGLDHSGVHV 438

Query: 74  LLSNIYASANRWEDVAKVRKEME 6
            LSN+YA  ++WE+V KVR+ M+
Sbjct: 439 QLSNMYAGWSKWEEVLKVRRTMD 461


>ref|XP_004954507.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Setaria italica]
          Length = 499

 Score =  110 bits (275), Expect = 2e-22
 Identities = 53/83 (63%), Positives = 63/83 (75%)
 Frame = -3

Query: 254 GRAGALEEAMKVVREMPMEPDSYVLGALLNACKMHGDVEFGEEAAERLVEQGLDHGGVHV 75
           GRAG L EA+ VVR MPM PDSYVLGALLNAC   GDV+ G++    L EQGLDH GVHV
Sbjct: 365 GRAGRLTEALAVVRSMPMRPDSYVLGALLNACAARGDVDAGKQVVAWLAEQGLDHTGVHV 424

Query: 74  LLSNIYASANRWEDVAKVRKEME 6
            LSN+YAS ++WE VA +R+ M+
Sbjct: 425 QLSNMYASWSKWEQVASLRRTMD 447


>ref|XP_003573157.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g62890-like [Brachypodium distachyon]
          Length = 503

 Score =  110 bits (274), Expect = 3e-22
 Identities = 56/86 (65%), Positives = 64/86 (74%), Gaps = 3/86 (3%)
 Frame = -3

Query: 254 GRAGALEEAMKVVREMPMEPDSYVLGALLNACKMHG---DVEFGEEAAERLVEQGLDHGG 84
           GRAG L EA+ VVR MPM PDSYVLGALLNAC +HG    VE G++  E L E GLDH G
Sbjct: 361 GRAGLLSEAVDVVRGMPMRPDSYVLGALLNACWVHGGVDGVEVGKQVVEWLAELGLDHSG 420

Query: 83  VHVLLSNIYASANRWEDVAKVRKEME 6
           VHV LSN+YA +++WEDV KVR  ME
Sbjct: 421 VHVQLSNMYACSSKWEDVVKVRTAME 446


>gb|EMT03787.1| hypothetical protein F775_12207 [Aegilops tauschii]
          Length = 588

 Score =  107 bits (267), Expect = 2e-21
 Identities = 52/85 (61%), Positives = 63/85 (74%), Gaps = 2/85 (2%)
 Frame = -3

Query: 254 GRAGALEEAMKVVREMPMEPDSYVLGALLNACKMHG--DVEFGEEAAERLVEQGLDHGGV 81
           GRAG L EA  V R MPM PDSYVLGALLNAC++HG   V+ G++  E L E GLDH GV
Sbjct: 367 GRAGMLAEAAAVARAMPMRPDSYVLGALLNACRVHGGDGVKLGKQVVEWLAELGLDHSGV 426

Query: 80  HVLLSNIYASANRWEDVAKVRKEME 6
           HV LSN+YA +++WEDV ++R  ME
Sbjct: 427 HVQLSNMYACSSKWEDVVRIRSVME 451


>ref|XP_006649201.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g62890-like [Oryza brachyantha]
          Length = 504

 Score =  106 bits (264), Expect = 4e-21
 Identities = 49/83 (59%), Positives = 63/83 (75%)
 Frame = -3

Query: 254 GRAGALEEAMKVVREMPMEPDSYVLGALLNACKMHGDVEFGEEAAERLVEQGLDHGGVHV 75
           GRAG +EEA++VVR MPM PD+YV+GALLNAC   GDVE G++ AE + E GL+H G+ V
Sbjct: 370 GRAGMVEEALEVVRGMPMRPDAYVVGALLNACVARGDVEAGKKVAEMIAELGLEHSGLQV 429

Query: 74  LLSNIYASANRWEDVAKVRKEME 6
            LSN+YA   +WE+V  VR+ ME
Sbjct: 430 QLSNLYAGRGKWEEVVSVRRGME 452


>gb|EXB70668.1| hypothetical protein L484_023854 [Morus notabilis]
          Length = 628

 Score =  105 bits (263), Expect = 5e-21
 Identities = 46/83 (55%), Positives = 65/83 (78%)
 Frame = -3

Query: 254 GRAGALEEAMKVVREMPMEPDSYVLGALLNACKMHGDVEFGEEAAERLVEQGLDHGGVHV 75
           GRAG +EEA +++  MPMEPD+Y+ GALL AC++HG+VE GE+  E+L+E   +  G +V
Sbjct: 489 GRAGLIEEAEELISSMPMEPDAYIWGALLGACRIHGEVELGEDVMEKLLEVEPEKDGAYV 548

Query: 74  LLSNIYASANRWEDVAKVRKEME 6
           L+SNIY+SAN+W D  K+RKEM+
Sbjct: 549 LMSNIYSSANKWRDAVKLRKEMK 571


>ref|NP_001048611.1| Os02g0830000 [Oryza sativa Japonica Group]
           gi|48716334|dbj|BAD22946.1| pentatricopeptide
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|113538142|dbj|BAF10525.1| Os02g0830000 [Oryza
           sativa Japonica Group] gi|125584254|gb|EAZ25185.1|
           hypothetical protein OsJ_08985 [Oryza sativa Japonica
           Group]
          Length = 500

 Score =  102 bits (254), Expect = 5e-20
 Identities = 52/84 (61%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
 Frame = -3

Query: 254 GRAGALEEAMKVVREMPMEPDSYVLGALLNACKMHGDVEFGEEAAERLVEQGL-DHGGVH 78
           GRAG +EEA++VVR MPM PDSYVLGALLNAC   GD E GEE A  + E GL D  GV 
Sbjct: 370 GRAGMVEEALEVVRRMPMRPDSYVLGALLNACVARGDTEGGEEVAAMMAELGLDDRSGVQ 429

Query: 77  VLLSNIYASANRWEDVAKVRKEME 6
           V LSN+YA   +WE+V  VR+ ME
Sbjct: 430 VQLSNLYAGRGKWEEVVGVRRGME 453