BLASTX nr result
ID: Cocculus23_contig00040149
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00040149
(245 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN71183.1| hypothetical protein VITISV_033416 [Vitis vinifera] 138 7e-31
dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Gl... 136 3e-30
emb|CAN81603.1| hypothetical protein VITISV_031789 [Vitis vinifera] 130 2e-28
emb|CAN61323.1| hypothetical protein VITISV_012107 [Vitis vinifera] 128 7e-28
emb|CAN74164.1| hypothetical protein VITISV_026444 [Vitis vinifera] 127 1e-27
emb|CAN69553.1| hypothetical protein VITISV_009018 [Vitis vinifera] 127 2e-27
emb|CAN79193.1| hypothetical protein VITISV_000235 [Vitis vinifera] 124 1e-26
emb|CAN61166.1| hypothetical protein VITISV_008378 [Vitis vinifera] 124 2e-26
emb|CAN75796.1| hypothetical protein VITISV_024891 [Vitis vinifera] 123 3e-26
gb|AAD12997.1| gag-pol polyprotein [Zea mays] 119 4e-25
gb|AAD12998.1| pol polyprotein [Zea mays] 119 4e-25
gb|EMT12132.1| Eukaryotic translation initiation factor 3 subuni... 119 6e-25
emb|CAN74609.1| hypothetical protein VITISV_029328 [Vitis vinifera] 117 1e-24
emb|CAN63819.1| hypothetical protein VITISV_028102 [Vitis vinifera] 117 1e-24
emb|CAN78206.1| hypothetical protein VITISV_023427 [Vitis vinifera] 117 2e-24
gb|AHL77759.1| polyprotein [Prunus persica] 115 5e-24
emb|CBI20118.3| unnamed protein product [Vitis vinifera] 115 5e-24
gb|ABA95205.1| retrotransposon protein, putative, Ty1-copia subc... 115 6e-24
emb|CAN68020.1| hypothetical protein VITISV_003621 [Vitis vinifera] 115 6e-24
emb|CAE02960.2| OSJNBb0050N09.11 [Oryza sativa Japonica Group] 114 1e-23
>emb|CAN71183.1| hypothetical protein VITISV_033416 [Vitis vinifera]
Length = 1255
Score = 138 bits (348), Expect = 7e-31
Identities = 66/80 (82%), Positives = 73/80 (91%)
Frame = +3
Query: 3 IMRTDRGGEYYGRYIEDGQAPGPFANFLQEQGIVA*YILPSSPNQNGVAERRNRTLLNMV 182
I+R+DRGGEYYGRY+EDGQ PGPFA FLQE GIVA Y +P SP+QNGVAERRNRTLL+MV
Sbjct: 627 IVRSDRGGEYYGRYLEDGQPPGPFAKFLQEHGIVAQYTMPGSPDQNGVAERRNRTLLDMV 686
Query: 183 RSMLSSSKLPRSLWTEALKT 242
RSMLSSSKLP+ LWTEALKT
Sbjct: 687 RSMLSSSKLPKFLWTEALKT 706
>dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
Length = 1321
Score = 136 bits (343), Expect = 3e-30
Identities = 65/80 (81%), Positives = 72/80 (90%)
Frame = +3
Query: 3 IMRTDRGGEYYGRYIEDGQAPGPFANFLQEQGIVA*YILPSSPNQNGVAERRNRTLLNMV 182
I+R+DRGGEYYGRY E+GQAPGPFA FLQE GIVA Y +P SPNQNGVAERRNRTLL+MV
Sbjct: 512 IVRSDRGGEYYGRYTENGQAPGPFAKFLQEHGIVAQYTMPGSPNQNGVAERRNRTLLDMV 571
Query: 183 RSMLSSSKLPRSLWTEALKT 242
RSMLS+S LP+SLW EALKT
Sbjct: 572 RSMLSNSNLPKSLWAEALKT 591
>emb|CAN81603.1| hypothetical protein VITISV_031789 [Vitis vinifera]
Length = 595
Score = 130 bits (326), Expect = 2e-28
Identities = 61/80 (76%), Positives = 72/80 (90%)
Frame = +3
Query: 3 IMRTDRGGEYYGRYIEDGQAPGPFANFLQEQGIVA*YILPSSPNQNGVAERRNRTLLNMV 182
I+R++RGGEYYGRY+EDGQAPGPFA FLQE IVA Y +P SP+QNGV E+RNRTLL+MV
Sbjct: 360 IVRSNRGGEYYGRYLEDGQAPGPFAKFLQEYRIVAQYTMPGSPDQNGVVEKRNRTLLDMV 419
Query: 183 RSMLSSSKLPRSLWTEALKT 242
+SMLSSSKLP+ LWTEA+KT
Sbjct: 420 KSMLSSSKLPKFLWTEAVKT 439
>emb|CAN61323.1| hypothetical protein VITISV_012107 [Vitis vinifera]
Length = 1077
Score = 128 bits (322), Expect = 7e-28
Identities = 61/79 (77%), Positives = 69/79 (87%)
Frame = +3
Query: 3 IMRTDRGGEYYGRYIEDGQAPGPFANFLQEQGIVA*YILPSSPNQNGVAERRNRTLLNMV 182
I+R+DRGGEYYGRY+EDGQ+PGPF FLQE GIVA Y + SPNQNGV ERRNRTLL+MV
Sbjct: 232 IVRSDRGGEYYGRYLEDGQSPGPFMKFLQEHGIVAQYTMLGSPNQNGVVERRNRTLLDMV 291
Query: 183 RSMLSSSKLPRSLWTEALK 239
RSML++SKLPR LW EALK
Sbjct: 292 RSMLNNSKLPRFLWIEALK 310
>emb|CAN74164.1| hypothetical protein VITISV_026444 [Vitis vinifera]
Length = 689
Score = 127 bits (320), Expect = 1e-27
Identities = 62/80 (77%), Positives = 72/80 (90%)
Frame = +3
Query: 3 IMRTDRGGEYYGRYIEDGQAPGPFANFLQEQGIVA*YILPSSPNQNGVAERRNRTLLNMV 182
I+R+DRGGEYYGRY+E+GQ+PGPFA FLQE GIVA Y +PSS + NGVAERRN+TLL+MV
Sbjct: 467 IVRSDRGGEYYGRYLENGQSPGPFAKFLQEHGIVAQYTMPSSLDHNGVAERRNQTLLDMV 526
Query: 183 RSMLSSSKLPRSLWTEALKT 242
RSMLSSSKL + LWTEALKT
Sbjct: 527 RSMLSSSKLLKFLWTEALKT 546
>emb|CAN69553.1| hypothetical protein VITISV_009018 [Vitis vinifera]
Length = 635
Score = 127 bits (318), Expect = 2e-27
Identities = 60/80 (75%), Positives = 71/80 (88%)
Frame = +3
Query: 3 IMRTDRGGEYYGRYIEDGQAPGPFANFLQEQGIVA*YILPSSPNQNGVAERRNRTLLNMV 182
I+R++R GEYYGRY+EDGQ+PGP A FLQE GIVA Y +P SP+QN VA+RRNRTLL+MV
Sbjct: 321 IVRSNRSGEYYGRYLEDGQSPGPLAKFLQEHGIVAQYTMPGSPDQNSVAKRRNRTLLDMV 380
Query: 183 RSMLSSSKLPRSLWTEALKT 242
RSMLSSSKLP+ LWTEAL+T
Sbjct: 381 RSMLSSSKLPQFLWTEALQT 400
>emb|CAN79193.1| hypothetical protein VITISV_000235 [Vitis vinifera]
Length = 552
Score = 124 bits (312), Expect = 1e-26
Identities = 60/80 (75%), Positives = 69/80 (86%)
Frame = +3
Query: 3 IMRTDRGGEYYGRYIEDGQAPGPFANFLQEQGIVA*YILPSSPNQNGVAERRNRTLLNMV 182
IMRTD+GGEYYGRYIEDGQ PG FA FLQE GIVA Y +P S ++N V ERRNRTL++MV
Sbjct: 330 IMRTDKGGEYYGRYIEDGQPPGLFAKFLQEHGIVARYTMPGSLDRNSVVERRNRTLMDMV 389
Query: 183 RSMLSSSKLPRSLWTEALKT 242
RSM S+SKLP+SLWT+ALKT
Sbjct: 390 RSMRSNSKLPKSLWTKALKT 409
>emb|CAN61166.1| hypothetical protein VITISV_008378 [Vitis vinifera]
Length = 366
Score = 124 bits (310), Expect = 2e-26
Identities = 59/78 (75%), Positives = 68/78 (87%)
Frame = +3
Query: 9 RTDRGGEYYGRYIEDGQAPGPFANFLQEQGIVA*YILPSSPNQNGVAERRNRTLLNMVRS 188
+ ++ GEYYGRY+E+GQA GPFA FLQE GIV Y +P SP+QNGVAERRNRTLL+MVRS
Sbjct: 75 KANKDGEYYGRYMENGQASGPFAKFLQEHGIVTQYTMPGSPDQNGVAERRNRTLLDMVRS 134
Query: 189 MLSSSKLPRSLWTEALKT 242
MLSSSKLPR LWT+ALKT
Sbjct: 135 MLSSSKLPRFLWTKALKT 152
>emb|CAN75796.1| hypothetical protein VITISV_024891 [Vitis vinifera]
Length = 492
Score = 123 bits (308), Expect = 3e-26
Identities = 59/80 (73%), Positives = 67/80 (83%)
Frame = +3
Query: 3 IMRTDRGGEYYGRYIEDGQAPGPFANFLQEQGIVA*YILPSSPNQNGVAERRNRTLLNMV 182
I+R++RG EYYGRY+EDGQ PGPFA FLQE GIVA Y + P+QNGV ERRNRTLL+MV
Sbjct: 380 IVRSBRGREYYGRYLEDGQXPGPFAKFLQEHGIVAQYTMSGFPDQNGVVERRNRTLLDMV 439
Query: 183 RSMLSSSKLPRSLWTEALKT 242
RS LSSSKLP+ LWT ALKT
Sbjct: 440 RSXLSSSKLPKFLWTXALKT 459
>gb|AAD12997.1| gag-pol polyprotein [Zea mays]
Length = 1406
Score = 119 bits (298), Expect = 4e-25
Identities = 58/80 (72%), Positives = 64/80 (80%)
Frame = +3
Query: 3 IMRTDRGGEYYGRYIEDGQAPGPFANFLQEQGIVA*YILPSSPNQNGVAERRNRTLLNMV 182
I+R+DRGGEYYGR+ E GQ PGPFA FL+E GIVA Y P P QNGVAERRNRTL++MV
Sbjct: 568 IVRSDRGGEYYGRHTEYGQVPGPFARFLRENGIVAQYSTPGEPQQNGVAERRNRTLMDMV 627
Query: 183 RSMLSSSKLPRSLWTEALKT 242
RSMLS S LP LW EALKT
Sbjct: 628 RSMLSYSNLPLGLWMEALKT 647
>gb|AAD12998.1| pol polyprotein [Zea mays]
Length = 998
Score = 119 bits (298), Expect = 4e-25
Identities = 58/80 (72%), Positives = 64/80 (80%)
Frame = +3
Query: 3 IMRTDRGGEYYGRYIEDGQAPGPFANFLQEQGIVA*YILPSSPNQNGVAERRNRTLLNMV 182
I+R+DRGGEYYGR+ E GQ PGPFA FL+E GIVA Y P P QNGVAERRNRTL++MV
Sbjct: 160 IVRSDRGGEYYGRHTEYGQVPGPFARFLRENGIVAQYSTPGEPQQNGVAERRNRTLMDMV 219
Query: 183 RSMLSSSKLPRSLWTEALKT 242
RSMLS S LP LW EALKT
Sbjct: 220 RSMLSYSNLPLGLWMEALKT 239
>gb|EMT12132.1| Eukaryotic translation initiation factor 3 subunit A [Aegilops
tauschii]
Length = 2007
Score = 119 bits (297), Expect = 6e-25
Identities = 57/80 (71%), Positives = 64/80 (80%)
Frame = +3
Query: 3 IMRTDRGGEYYGRYIEDGQAPGPFANFLQEQGIVA*YILPSSPNQNGVAERRNRTLLNMV 182
I+R+DRGGEYYGR+ GQ PGPFA FLQE GIVA Y +P P QNGVAERRNRTL++MV
Sbjct: 670 ILRSDRGGEYYGRHTPYGQVPGPFAKFLQETGIVAQYSMPGEPQQNGVAERRNRTLMDMV 729
Query: 183 RSMLSSSKLPRSLWTEALKT 242
RSM+S S LP LW EALKT
Sbjct: 730 RSMMSYSNLPLGLWMEALKT 749
>emb|CAN74609.1| hypothetical protein VITISV_029328 [Vitis vinifera]
Length = 969
Score = 117 bits (294), Expect = 1e-24
Identities = 57/78 (73%), Positives = 63/78 (80%)
Frame = +3
Query: 9 RTDRGGEYYGRYIEDGQAPGPFANFLQEQGIVA*YILPSSPNQNGVAERRNRTLLNMVRS 188
R D+GGEYYGRY E+GQAPGPFA FLQE GIVA Y +P S QNGV ERR RTL++MVRS
Sbjct: 419 RKDKGGEYYGRYTENGQAPGPFAKFLQEHGIVAQYTMPGSSYQNGVTERRKRTLMDMVRS 478
Query: 189 MLSSSKLPRSLWTEALKT 242
M S+SKLP SLW E LKT
Sbjct: 479 MHSNSKLPESLWIEDLKT 496
>emb|CAN63819.1| hypothetical protein VITISV_028102 [Vitis vinifera]
Length = 1085
Score = 117 bits (294), Expect = 1e-24
Identities = 59/76 (77%), Positives = 61/76 (80%)
Frame = +3
Query: 15 DRGGEYYGRYIEDGQAPGPFANFLQEQGIVA*YILPSSPNQNGVAERRNRTLLNMVRSML 194
DRGGEYY RY EDGQA GPFA FLQE IVA Y +P SP QNGV E RNRTL+NMVRSM
Sbjct: 2 DRGGEYYXRYTEDGQALGPFAKFLQEYEIVAQYTMPGSPYQNGVVEIRNRTLMNMVRSMR 61
Query: 195 SSSKLPRSLWTEALKT 242
S SKLP SLWTEALKT
Sbjct: 62 SHSKLPESLWTEALKT 77
>emb|CAN78206.1| hypothetical protein VITISV_023427 [Vitis vinifera]
Length = 339
Score = 117 bits (293), Expect = 2e-24
Identities = 57/80 (71%), Positives = 65/80 (81%)
Frame = +3
Query: 3 IMRTDRGGEYYGRYIEDGQAPGPFANFLQEQGIVA*YILPSSPNQNGVAERRNRTLLNMV 182
IMR DRGGEYYGRY E+GQ PGPFA FLQ+ GIVA Y +P P QNGVAERRNRTL ++V
Sbjct: 33 IMRMDRGGEYYGRYTENGQVPGPFAKFLQKHGIVALYTMPGFPPQNGVAERRNRTLKDIV 92
Query: 183 RSMLSSSKLPRSLWTEALKT 242
RSM +SKLP S +TE+LKT
Sbjct: 93 RSMRRNSKLPESFFTESLKT 112
>gb|AHL77759.1| polyprotein [Prunus persica]
Length = 1363
Score = 115 bits (289), Expect = 5e-24
Identities = 53/80 (66%), Positives = 66/80 (82%)
Frame = +3
Query: 3 IMRTDRGGEYYGRYIEDGQAPGPFANFLQEQGIVA*YILPSSPNQNGVAERRNRTLLNMV 182
++R+DRGGE+YGR+ E G+ PGPFA FLQE+GIVA Y P +P QNGVAERRNRTL+ M+
Sbjct: 555 VVRSDRGGEFYGRFDEKGRNPGPFAKFLQEEGIVAQYTNPGTPQQNGVAERRNRTLIEMI 614
Query: 183 RSMLSSSKLPRSLWTEALKT 242
RS++ SKLP+ LW EALKT
Sbjct: 615 RSLMCCSKLPKFLWGEALKT 634
>emb|CBI20118.3| unnamed protein product [Vitis vinifera]
Length = 1354
Score = 115 bits (289), Expect = 5e-24
Identities = 55/80 (68%), Positives = 65/80 (81%)
Frame = +3
Query: 3 IMRTDRGGEYYGRYIEDGQAPGPFANFLQEQGIVA*YILPSSPNQNGVAERRNRTLLNMV 182
I+R+D+GGEYYGRY E GQ PGPFA FL++ GI A Y +P +P QNGVAERRNRTL+ MV
Sbjct: 927 IVRSDQGGEYYGRYDESGQNPGPFAKFLEKHGIRAQYTMPGTPQQNGVAERRNRTLMEMV 986
Query: 183 RSMLSSSKLPRSLWTEALKT 242
RSM+S S +P SLW EALKT
Sbjct: 987 RSMMSYSSVPISLWGEALKT 1006
>gb|ABA95205.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1407
Score = 115 bits (288), Expect = 6e-24
Identities = 57/80 (71%), Positives = 62/80 (77%)
Frame = +3
Query: 3 IMRTDRGGEYYGRYIEDGQAPGPFANFLQEQGIVA*YILPSSPNQNGVAERRNRTLLNMV 182
I+R+DRGGEYYGR+ GQ PGPFA FLQE GI A Y P P QNGVAERRNRTL++MV
Sbjct: 588 IVRSDRGGEYYGRHTTYGQIPGPFARFLQESGIKAQYSAPGEPQQNGVAERRNRTLMDMV 647
Query: 183 RSMLSSSKLPRSLWTEALKT 242
RSMLS S LP LW EALKT
Sbjct: 648 RSMLSHSTLPVKLWMEALKT 667
>emb|CAN68020.1| hypothetical protein VITISV_003621 [Vitis vinifera]
Length = 1180
Score = 115 bits (288), Expect = 6e-24
Identities = 55/80 (68%), Positives = 64/80 (80%)
Frame = +3
Query: 3 IMRTDRGGEYYGRYIEDGQAPGPFANFLQEQGIVA*YILPSSPNQNGVAERRNRTLLNMV 182
I+R+DRGGEYYGRY E GQ PGPFA FL++ GI A Y +P +P QNGVAERRNRTL+ MV
Sbjct: 529 IVRSDRGGEYYGRYDESGQNPGPFAKFLEKHGIRAQYTMPGTPQQNGVAERRNRTLMEMV 588
Query: 183 RSMLSSSKLPRSLWTEALKT 242
RSM+S S +P SLW E LKT
Sbjct: 589 RSMMSYSSVPISLWGEXLKT 608
>emb|CAE02960.2| OSJNBb0050N09.11 [Oryza sativa Japonica Group]
Length = 1405
Score = 114 bits (285), Expect = 1e-23
Identities = 55/80 (68%), Positives = 62/80 (77%)
Frame = +3
Query: 3 IMRTDRGGEYYGRYIEDGQAPGPFANFLQEQGIVA*YILPSSPNQNGVAERRNRTLLNMV 182
++R+DRGGEYYGR+ GQ PGPFA FL E GIVA Y P P QNGVAERRNRTL++MV
Sbjct: 579 VVRSDRGGEYYGRHTPYGQVPGPFARFLLENGIVAQYSTPGEPQQNGVAERRNRTLMDMV 638
Query: 183 RSMLSSSKLPRSLWTEALKT 242
RSM+S S LP LW EALKT
Sbjct: 639 RSMMSYSTLPLGLWMEALKT 658