BLASTX nr result
ID: Cocculus23_contig00040148
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00040148
(331 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004491299.1| PREDICTED: genome polyprotein-like [Cicer ar... 52 1e-11
ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer ar... 52 2e-11
ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer ar... 49 2e-11
ref|YP_008992013.1| polyprotein [Citrus endogenous pararetroviru... 52 3e-11
gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus] 52 3e-11
gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus] 52 3e-11
ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer ar... 50 5e-11
ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, part... 49 3e-08
ref|XP_006405940.1| hypothetical protein EUTSA_v10028344mg [Eutr... 51 1e-07
ref|XP_006398030.1| hypothetical protein EUTSA_v10001272mg [Eutr... 50 1e-07
ref|XP_002317407.1| hypothetical protein POPTR_0011s07150g [Popu... 42 5e-07
ref|XP_006409622.1| hypothetical protein EUTSA_v10023188mg, part... 47 6e-07
ref|XP_006376643.1| hypothetical protein POPTR_0012s01890g [Popu... 42 2e-06
ref|XP_006403079.1| hypothetical protein EUTSA_v10003477mg, part... 51 2e-06
ref|XP_006408743.1| hypothetical protein EUTSA_v10002230mg [Eutr... 44 8e-06
>ref|XP_004491299.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 894
Score = 52.4 bits (124), Expect(2) = 1e-11
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +2
Query: 149 IALGEIFQLALQALTKLCNDHQAMTNLQKASGSLSPACAKAHLEIGCK-KDCHCSSQK 319
++LG+I Q+AL+AL KLC HQ + + + AC K +LEI CK K C C+++K
Sbjct: 134 LSLGQIHQIALEALEKLCRLHQHFSEVMQQKSKFIKACKKPYLEIKCKDKICSCTTRK 191
Score = 42.4 bits (98), Expect(2) = 1e-11
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = +1
Query: 1 HYQRMLFRYHHLDGVATPELRYTFIASLPQLIQPELNRL 117
HYQRM RY+ L+G L+ +I+SLPQ +QPE++R+
Sbjct: 85 HYQRMTQRYYVLNGFNDHTLKNIYISSLPQELQPEIHRM 123
>ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 1951
Score = 52.0 bits (123), Expect(2) = 2e-11
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +2
Query: 149 IALGEIFQLALQALTKLCNDHQAMTNLQKASGSLSPACAKAHLEIGCK-KDCHCSSQK 319
++LG+I Q+AL+AL KLC HQ + + + AC K +LEI CK K C C+++K
Sbjct: 971 LSLGQIHQIALEALEKLCTLHQHFSEIVQQKSKFIKACKKPYLEIKCKDKICSCTTRK 1028
Score = 42.4 bits (98), Expect(2) = 2e-11
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = +1
Query: 1 HYQRMLFRYHHLDGVATPELRYTFIASLPQLIQPELNRL 117
HYQRM RY+ L+G L+ +I+SLPQ +QPE++R+
Sbjct: 922 HYQRMTQRYYVLNGFNDHTLKNIYISSLPQELQPEIHRM 960
>ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 1170
Score = 48.9 bits (115), Expect(2) = 2e-11
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +2
Query: 149 IALGEIFQLALQALTKLCNDHQAMTNLQKASGSLSPACAKAHLEIGCKKD-CHCSSQK 319
++LG+I Q+ L+AL KLC HQ + + + AC K +LEI CK + C C ++K
Sbjct: 411 LSLGQIHQITLEALEKLCRLHQHFSEIVQQKSKFIKACKKPYLEIKCKNNKCSCLTRK 468
Score = 45.1 bits (105), Expect(2) = 2e-11
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = +1
Query: 1 HYQRMLFRYHHLDGVATPELRYTFIASLPQLIQPELNRL 117
HYQRM RY+ L+G L+ T+I+SLPQ +QPE++R+
Sbjct: 362 HYQRMTQRYYVLNGFNDHSLKNTYISSLPQELQPEIHRM 400
>ref|YP_008992013.1| polyprotein [Citrus endogenous pararetrovirus]
gi|565672276|gb|AHC13194.1| polyprotein [Citrus
endogenous pararetrovirus]
Length = 1812
Score = 52.0 bits (123), Expect(2) = 3e-11
Identities = 28/59 (47%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +2
Query: 149 IALGEIFQLALQALTKLCNDHQAMTNLQKASGSLSPACAKAHLEIGC--KKDCHCSSQK 319
I+LG+IFQLA L KLC Q +L K AC K +L+I C KKDC CS +K
Sbjct: 971 ISLGKIFQLAKTCLDKLCEQKQFFKDLLKDKEPFRSACKKPYLQIKCKQKKDCDCSPKK 1029
Score = 41.6 bits (96), Expect(2) = 3e-11
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +1
Query: 1 HYQRMLFRYHHLDGVATPELRYTFIASLPQLIQPELNR 114
HY+RM ++ L+G P L++ F+ASLP+ +QP++ R
Sbjct: 922 HYKRMSLLFYKLNGFNEPTLKHVFLASLPEELQPDIQR 959
>gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]
Length = 1799
Score = 52.0 bits (123), Expect(2) = 3e-11
Identities = 28/59 (47%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +2
Query: 149 IALGEIFQLALQALTKLCNDHQAMTNLQKASGSLSPACAKAHLEIGC--KKDCHCSSQK 319
I+LG+IFQLA L KLC Q +L K AC K +L+I C KKDC CS +K
Sbjct: 958 ISLGKIFQLAKTCLDKLCEQKQFFKDLLKDKEPFRSACKKPYLQIKCKQKKDCDCSPKK 1016
Score = 41.6 bits (96), Expect(2) = 3e-11
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +1
Query: 1 HYQRMLFRYHHLDGVATPELRYTFIASLPQLIQPELNR 114
HY+RM ++ L+G P L++ F+ASLP+ +QP++ R
Sbjct: 909 HYKRMSLLFYKLNGFNEPTLKHVFLASLPEELQPDIQR 946
>gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]
Length = 1701
Score = 52.0 bits (123), Expect(2) = 3e-11
Identities = 28/59 (47%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +2
Query: 149 IALGEIFQLALQALTKLCNDHQAMTNLQKASGSLSPACAKAHLEIGC--KKDCHCSSQK 319
I+LG+IFQLA L KLC Q +L K AC K +L+I C KKDC CS +K
Sbjct: 860 ISLGKIFQLAKTCLDKLCEQKQFFKDLLKDKEPFRSACKKPYLQIKCKQKKDCDCSPKK 918
Score = 41.6 bits (96), Expect(2) = 3e-11
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +1
Query: 1 HYQRMLFRYHHLDGVATPELRYTFIASLPQLIQPELNR 114
HY+RM ++ L+G P L++ F+ASLP+ +QP++ R
Sbjct: 811 HYKRMSLLFYKLNGFNEPTLKHVFLASLPEELQPDIQR 848
>ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 1645
Score = 49.7 bits (117), Expect(2) = 5e-11
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +2
Query: 149 IALGEIFQLALQALTKLCNDHQAMTNLQKASGSLSPACAKAHLEIGCK-KDCHCSSQK 319
++LG+I Q+AL+AL LC HQ + + + + AC K +LEI CK K C C++ K
Sbjct: 951 LSLGQIHQIALEALENLCRLHQHFSEIVQQKSKFTKACKKPYLEIKCKDKICSCTTIK 1008
Score = 43.1 bits (100), Expect(2) = 5e-11
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = +1
Query: 1 HYQRMLFRYHHLDGVATPELRYTFIASLPQLIQPELNRL 117
HYQRM RY+ L+G L+ T I+SLPQ +QPE++R+
Sbjct: 902 HYQRMTQRYYVLNGFNDHTLKNTHISSLPQELQPEIHRM 940
>ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, partial [Eutrema salsugineum]
gi|557090298|gb|ESQ31006.1| hypothetical protein
EUTSA_v10012231mg, partial [Eutrema salsugineum]
Length = 1904
Score = 49.3 bits (116), Expect(2) = 3e-08
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +2
Query: 143 TQIALGEIFQLALQALTKLCNDHQAMTNLQKASGSLSPACAKAHLEIGCK-KDCHCSSQK 319
+Q +LGEI++++L AL KLCN + LQ+ L AC + L I CK K C CS+
Sbjct: 850 SQASLGEIYKISLAALEKLCNHQKFFKQLQEQGKLLGRACDRPELSIKCKTKRCGCSTSY 909
Query: 320 STSK 331
K
Sbjct: 910 KQEK 913
Score = 34.3 bits (77), Expect(2) = 3e-08
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = +1
Query: 1 HYQRMLFRYHHLDGVATPELRYTFIASLPQLIQPELNRL 117
HY+RM R++ L+G+ L+ T++ SLP+ + E +R+
Sbjct: 803 HYERMSKRFYALNGIDDVNLKQTYLKSLPEPLGNETSRI 841
>ref|XP_006405940.1| hypothetical protein EUTSA_v10028344mg [Eutrema salsugineum]
gi|557107078|gb|ESQ47393.1| hypothetical protein
EUTSA_v10028344mg [Eutrema salsugineum]
Length = 1508
Score = 51.2 bits (121), Expect(2) = 1e-07
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +2
Query: 143 TQIALGEIFQLALQALTKLCNDHQAMTNLQKASGSLSPACAKAHLEIGCK-KDCHCSSQK 319
+Q +LGEI+Q++L AL KLCN + LQ+ L AC + L I CK K C CS+
Sbjct: 455 SQASLGEIYQISLAALEKLCNHQKFFKQLQEKGKLLGRACDRPELSIKCKTKRCKCSTSY 514
Query: 320 STSK 331
K
Sbjct: 515 KQEK 518
Score = 30.0 bits (66), Expect(2) = 1e-07
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 1 HYQRMLFRYHHLDGVATPELRYTFIASLPQLIQPELNRL 117
HY+RM R++ L+G+ L+ ++ SLP+ + E +++
Sbjct: 408 HYERMSKRFYVLNGIDDVNLKQAYLNSLPEPLGNETSQI 446
>ref|XP_006398030.1| hypothetical protein EUTSA_v10001272mg [Eutrema salsugineum]
gi|557099112|gb|ESQ39483.1| hypothetical protein
EUTSA_v10001272mg [Eutrema salsugineum]
Length = 828
Score = 50.1 bits (118), Expect(2) = 1e-07
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +2
Query: 143 TQIALGEIFQLALQALTKLCNDHQAMTNLQKASGSLSPACAKAHLEIGCK-KDCHCSSQK 319
+Q +LGEI+Q++L AL KLCN + LQ+ L AC + L I CK K C CS+
Sbjct: 486 SQASLGEIYQISLAALEKLCNYQKFFKELQEQGKLLGRACDRPELSIKCKTKRCGCSTSY 545
Query: 320 STSK 331
K
Sbjct: 546 KQEK 549
Score = 31.2 bits (69), Expect(2) = 1e-07
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 1 HYQRMLFRYHHLDGVATPELRYTFIASLPQLIQPELNRL 117
HY+RM R++ L+G+ ++ ++ SLP+ + E +R+
Sbjct: 439 HYERMSKRFYALNGIDDVNMKQAYLNSLPEPLGNETSRI 477
>ref|XP_002317407.1| hypothetical protein POPTR_0011s07150g [Populus trichocarpa]
gi|222860472|gb|EEE98019.1| hypothetical protein
POPTR_0011s07150g [Populus trichocarpa]
Length = 950
Score = 41.6 bits (96), Expect(2) = 5e-07
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +2
Query: 152 ALGEIFQLALQALTKLCNDHQAMTNLQKASGSLSPACAKAHLEIGCKK--DCHCSSQK 319
+LG IF L+AL K+C+ H+ T + + ++ AC + L I C DC+C +K
Sbjct: 835 SLGTIFHQVLEALNKMCDQHKYFTKILQPDKTMLRACKRPDLLIKCSDNVDCNCPLKK 892
Score = 37.7 bits (86), Expect(2) = 5e-07
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +1
Query: 1 HYQRMLFRYHHLDGVATPELRYTFIASLPQLIQPELNRLHPDR 129
H+++M RYH L G P L++ F+AS+P+ + E RL R
Sbjct: 785 HFKKMCRRYHILSGPDDPSLKHAFLASIPRDLADETFRLFKTR 827
>ref|XP_006409622.1| hypothetical protein EUTSA_v10023188mg, partial [Eutrema
salsugineum] gi|557110784|gb|ESQ51075.1| hypothetical
protein EUTSA_v10023188mg, partial [Eutrema salsugineum]
Length = 1101
Score = 47.0 bits (110), Expect(2) = 6e-07
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +2
Query: 143 TQIALGEIFQLALQALTKLCNDHQAMTNLQKASGSLSPACAKAHLEIGCK-KDCHCSSQK 319
+Q +LGEI+Q++L AL KLCN + LQ+ L AC + L I CK K CS+
Sbjct: 479 SQASLGEIYQISLSALEKLCNHQKFFKQLQEQGKLLGRACDRPELSIKCKAKRFGCSTSY 538
Query: 320 STSK 331
K
Sbjct: 539 KQEK 542
Score = 32.0 bits (71), Expect(2) = 6e-07
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +1
Query: 1 HYQRMLFRYHHLDGVATPELRYTFIASLPQLIQPELNRL 117
HY+RM R++ L+G+ L+ ++ SLP+ + E +R+
Sbjct: 432 HYERMSKRFYALNGIDDVNLKQAYLNSLPEPLGNETSRI 470
>ref|XP_006376643.1| hypothetical protein POPTR_0012s01890g [Populus trichocarpa]
gi|550326181|gb|ERP54440.1| hypothetical protein
POPTR_0012s01890g [Populus trichocarpa]
Length = 1153
Score = 42.0 bits (97), Expect(2) = 2e-06
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +2
Query: 152 ALGEIFQLALQALTKLCNDHQAMTNLQKASGSLSPACAKAHLEIGCK--KDCHCSSQKS 322
+LG IF L+AL K+C+ H+ T + + ++ AC + L I C DC+C +K+
Sbjct: 526 SLGTIFHQVLEALNKICDQHKYFTKILQPDKTMLHACKRPDLLIKCSDHADCNCPLKKT 584
Score = 35.4 bits (80), Expect(2) = 2e-06
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +1
Query: 1 HYQRMLFRYHHLDGVATPELRYTFIASLPQLIQPELNRLHPDR 129
H++ M RYH L G P L++ F+AS+P+ + E RL R
Sbjct: 476 HFKEMCQRYHILFGPDDPSLKHAFLASIPRDLANETFRLFKTR 518
>ref|XP_006403079.1| hypothetical protein EUTSA_v10003477mg, partial [Eutrema
salsugineum] gi|557104186|gb|ESQ44532.1| hypothetical
protein EUTSA_v10003477mg, partial [Eutrema salsugineum]
Length = 751
Score = 51.2 bits (121), Expect(2) = 2e-06
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +2
Query: 143 TQIALGEIFQLALQALTKLCNDHQAMTNLQKASGSLSPACAKAHLEIGCKKD-CHCSSQK 319
+Q +LGEI+Q++L AL KLCN + LQ+ L AC + L I CKK C CS+
Sbjct: 624 SQASLGEIYQISLAALEKLCNHQKFFKQLQEQGTLLGRACDRPELSIKCKKKRCGCSTSY 683
Query: 320 STSK 331
K
Sbjct: 684 KQEK 687
Score = 26.2 bits (56), Expect(2) = 2e-06
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1
Query: 1 HYQRMLFRYHHLDGVATPELRYTFIASLPQLIQPELNRL 117
HY+RM R + L+G+ + ++ LP+ + E +R+
Sbjct: 577 HYERMSKRLYALNGIDDVNHKQAYLNQLPEPLGNETSRI 615
>ref|XP_006408743.1| hypothetical protein EUTSA_v10002230mg [Eutrema salsugineum]
gi|557109899|gb|ESQ50196.1| hypothetical protein
EUTSA_v10002230mg [Eutrema salsugineum]
Length = 469
Score = 44.3 bits (103), Expect(2) = 8e-06
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +2
Query: 146 QIALGEIFQLALQALTKLCNDHQAMTNLQKASGSLSPACAKAHLEIGCK-KDCHCSSQKS 322
Q +LGEI+Q++L AL KLCN + LQ+ L A + L I CK K C C +
Sbjct: 133 QASLGEIYQISLAALEKLCNHQKFFKQLQEQGKLLGRAYDRPDLSIKCKAKRCGCFTSNK 192
Query: 323 TSK 331
K
Sbjct: 193 QEK 195
Score = 30.8 bits (68), Expect(2) = 8e-06
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 1 HYQRMLFRYHHLDGVATPELRYTFIASLPQLIQPELNRL 117
HY+RM R++ L+G+ L+ ++ SLP+ + + +R+
Sbjct: 85 HYERMSKRFYALNGIDNVNLKQAYLNSLPEPLGNKTSRI 123