BLASTX nr result
ID: Cocculus23_contig00039455
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cocculus23_contig00039455 (1072 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_001761054.1| predicted protein [Physcomitrella patens] gi... 64 1e-07 ref|XP_001775930.1| predicted protein [Physcomitrella patens] gi... 62 3e-07 >ref|XP_001761054.1| predicted protein [Physcomitrella patens] gi|162687740|gb|EDQ74121.1| predicted protein [Physcomitrella patens] Length = 229 Score = 63.9 bits (154), Expect = 1e-07 Identities = 48/139 (34%), Positives = 68/139 (48%), Gaps = 11/139 (7%) Frame = +1 Query: 121 SLRLTVLSARDLKVPKFLGETKCFALAWIDPRLKRXXXXXXXXXXXXXXXHLVWNDSLSF 300 +L + VL+A LK L + +A+AW+ P KR WND+LSF Sbjct: 5 TLEVIVLAAEGLKNVNILRKMSVYAVAWVAPDYKRTTSVHSKAGRNPF-----WNDALSF 59 Query: 301 PLSLDALRNPNACLTIQLLSASPMKMIHHERLIGSAILSLSDVRFHHLD---------FA 453 P++ D L +P + LTIQ+ SA + RL+GS L+L D+ A Sbjct: 60 PVTDDILLHPCSALTIQVYSAGTVS----PRLVGSTHLALRDIARMKATKTNSEEGDIVA 115 Query: 454 LQVWRPSGRAQGL--LCVS 504 L + RPSGR QG+ LCV+ Sbjct: 116 LPLQRPSGRTQGIVSLCVN 134 >ref|XP_001775930.1| predicted protein [Physcomitrella patens] gi|162672762|gb|EDQ59295.1| predicted protein [Physcomitrella patens] Length = 330 Score = 62.4 bits (150), Expect = 3e-07 Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 15/170 (8%) Frame = +1 Query: 124 LRLTVLSARDLKVPKFLGETKCFALAWIDPRLKRXXXXXXXXXXXXXXXHLVWNDSLSFP 303 L + +L+A DLK LG+ + +AWI+ LKR + VWND L P Sbjct: 23 LEVVILAAEDLKNVNVLGKMSVYVMAWIESALKRSTSVRHKTGK-----NAVWNDCLFLP 77 Query: 304 LSLDALRNPNACLTIQLLSASPMKMIHHERLIGSAILSLSDVRFHHLD---------FAL 456 +S D L NP++ LT+Q+ S + ++G++ L+L+D+ L Sbjct: 78 VSDDMLLNPHSSLTVQVYSTGTVS----PSVVGTSYLALADIARMKASKTNSDEGDIVTL 133 Query: 457 QVWRPSGRAQGLLCVSAWI------DCDLRISPASDGCVTGIPVDLSSVP 588 + R SGR QG + +S + + DG +P SSVP Sbjct: 134 PLHRRSGRTQGSIKISVNLTGATIQQIMYALDNGDDGWAIEMPTTSSSVP 183