BLASTX nr result

ID: Cocculus23_contig00039455 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00039455
         (1072 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001761054.1| predicted protein [Physcomitrella patens] gi...    64   1e-07
ref|XP_001775930.1| predicted protein [Physcomitrella patens] gi...    62   3e-07

>ref|XP_001761054.1| predicted protein [Physcomitrella patens]
           gi|162687740|gb|EDQ74121.1| predicted protein
           [Physcomitrella patens]
          Length = 229

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 48/139 (34%), Positives = 68/139 (48%), Gaps = 11/139 (7%)
 Frame = +1

Query: 121 SLRLTVLSARDLKVPKFLGETKCFALAWIDPRLKRXXXXXXXXXXXXXXXHLVWNDSLSF 300
           +L + VL+A  LK    L +   +A+AW+ P  KR                  WND+LSF
Sbjct: 5   TLEVIVLAAEGLKNVNILRKMSVYAVAWVAPDYKRTTSVHSKAGRNPF-----WNDALSF 59

Query: 301 PLSLDALRNPNACLTIQLLSASPMKMIHHERLIGSAILSLSDVRFHHLD---------FA 453
           P++ D L +P + LTIQ+ SA  +      RL+GS  L+L D+                A
Sbjct: 60  PVTDDILLHPCSALTIQVYSAGTVS----PRLVGSTHLALRDIARMKATKTNSEEGDIVA 115

Query: 454 LQVWRPSGRAQGL--LCVS 504
           L + RPSGR QG+  LCV+
Sbjct: 116 LPLQRPSGRTQGIVSLCVN 134


>ref|XP_001775930.1| predicted protein [Physcomitrella patens]
           gi|162672762|gb|EDQ59295.1| predicted protein
           [Physcomitrella patens]
          Length = 330

 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 15/170 (8%)
 Frame = +1

Query: 124 LRLTVLSARDLKVPKFLGETKCFALAWIDPRLKRXXXXXXXXXXXXXXXHLVWNDSLSFP 303
           L + +L+A DLK    LG+   + +AWI+  LKR               + VWND L  P
Sbjct: 23  LEVVILAAEDLKNVNVLGKMSVYVMAWIESALKRSTSVRHKTGK-----NAVWNDCLFLP 77

Query: 304 LSLDALRNPNACLTIQLLSASPMKMIHHERLIGSAILSLSDVRFHHLD---------FAL 456
           +S D L NP++ LT+Q+ S   +       ++G++ L+L+D+                 L
Sbjct: 78  VSDDMLLNPHSSLTVQVYSTGTVS----PSVVGTSYLALADIARMKASKTNSDEGDIVTL 133

Query: 457 QVWRPSGRAQGLLCVSAWI------DCDLRISPASDGCVTGIPVDLSSVP 588
            + R SGR QG + +S  +           +    DG    +P   SSVP
Sbjct: 134 PLHRRSGRTQGSIKISVNLTGATIQQIMYALDNGDDGWAIEMPTTSSSVP 183


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