BLASTX nr result
ID: Cocculus23_contig00039410
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00039410
(314 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006828625.1| hypothetical protein AMTR_s00129p00082230 [A... 110 2e-22
ref|XP_004144057.1| PREDICTED: DNA repair protein RAD51 homolog ... 110 2e-22
ref|NP_001233788.1| DNA repair protein RAD51 homolog [Solanum ly... 108 8e-22
ref|XP_006474560.1| PREDICTED: DNA repair protein RAD51 homolog ... 107 2e-21
ref|XP_003551035.1| PREDICTED: DNA repair protein RAD51 homolog ... 107 2e-21
gb|EXC13609.1| DNA repair protein RAD51-like protein [Morus nota... 106 3e-21
ref|XP_002273803.1| PREDICTED: DNA repair protein RAD51 homolog ... 105 6e-21
ref|XP_004508049.1| PREDICTED: DNA repair protein RAD51 homolog ... 105 8e-21
ref|XP_003542386.1| PREDICTED: DNA repair protein RAD51 homolog ... 105 8e-21
ref|XP_002516197.1| DNA repair protein rad51, putative [Ricinus ... 104 1e-20
ref|XP_006344556.1| PREDICTED: DNA repair protein RAD51 homolog ... 104 1e-20
ref|XP_007154535.1| hypothetical protein PHAVU_003G126800g [Phas... 103 2e-20
ref|XP_007202345.1| hypothetical protein PRUPE_ppa008236mg [Prun... 103 2e-20
gb|EYU28293.1| hypothetical protein MIMGU_mgv1a020539mg [Mimulus... 102 7e-20
ref|XP_002443207.1| hypothetical protein SORBIDRAFT_08g015360 [S... 102 7e-20
ref|XP_006381549.1| hypothetical protein POPTR_0006s13750g [Popu... 102 7e-20
dbj|BAF02935.1| RAD51 homolog [Populus nigra] 102 7e-20
ref|XP_004287679.1| PREDICTED: DNA repair protein RAD51 homolog ... 100 2e-19
gb|AFK39468.1| unknown [Medicago truncatula] 100 4e-19
ref|XP_003609937.1| DNA repair protein RAD51-like protein [Medic... 100 4e-19
>ref|XP_006828625.1| hypothetical protein AMTR_s00129p00082230 [Amborella trichopoda]
gi|548833415|gb|ERM96041.1| hypothetical protein
AMTR_s00129p00082230 [Amborella trichopoda]
Length = 343
Score = 110 bits (276), Expect = 2e-22
Identities = 54/69 (78%), Positives = 61/69 (88%), Gaps = 1/69 (1%)
Frame = +2
Query: 110 MEQQQQRHRKMIEQP-EEADDMQHGPFPVEQLQASGIAAIDVKKLKDAGLCTVESVAYSP 286
MEQ Q+ +K EQ +E +DMQHGPFP+EQLQASGIA++DVKKLKDAGLCTVESVAYSP
Sbjct: 1 MEQMHQKQQKFAEQQADETEDMQHGPFPIEQLQASGIASLDVKKLKDAGLCTVESVAYSP 60
Query: 287 RKDLLQIKG 313
RKDLLQIKG
Sbjct: 61 RKDLLQIKG 69
>ref|XP_004144057.1| PREDICTED: DNA repair protein RAD51 homolog [Cucumis sativus]
gi|449518135|ref|XP_004166099.1| PREDICTED: DNA repair
protein RAD51 homolog [Cucumis sativus]
Length = 340
Score = 110 bits (276), Expect = 2e-22
Identities = 53/65 (81%), Positives = 62/65 (95%)
Frame = +2
Query: 119 QQQRHRKMIEQPEEADDMQHGPFPVEQLQASGIAAIDVKKLKDAGLCTVESVAYSPRKDL 298
++QR++K E+ EEAD++QHGPFPVEQLQASGIAA+DVKKLKDAGLCTVESVAYSPRK+L
Sbjct: 2 ERQRNQKPSEEQEEADEIQHGPFPVEQLQASGIAAMDVKKLKDAGLCTVESVAYSPRKEL 61
Query: 299 LQIKG 313
LQIKG
Sbjct: 62 LQIKG 66
>ref|NP_001233788.1| DNA repair protein RAD51 homolog [Solanum lycopersicum]
gi|2500107|sp|Q40134.1|RAD51_SOLLC RecName: Full=DNA
repair protein RAD51 homolog gi|1143810|gb|AAC23700.1|
LeRAD51 [Solanum lycopersicum]
Length = 342
Score = 108 bits (270), Expect = 8e-22
Identities = 51/68 (75%), Positives = 60/68 (88%)
Frame = +2
Query: 110 MEQQQQRHRKMIEQPEEADDMQHGPFPVEQLQASGIAAIDVKKLKDAGLCTVESVAYSPR 289
MEQQ + + M +Q +E +D+QHGPFPVEQLQASGIAA+DVKKLKDAGLCTVESV Y+PR
Sbjct: 1 MEQQHRNQKSMQDQNDEIEDVQHGPFPVEQLQASGIAALDVKKLKDAGLCTVESVVYAPR 60
Query: 290 KDLLQIKG 313
K+LLQIKG
Sbjct: 61 KELLQIKG 68
>ref|XP_006474560.1| PREDICTED: DNA repair protein RAD51 homolog [Citrus sinensis]
Length = 342
Score = 107 bits (267), Expect = 2e-21
Identities = 52/68 (76%), Positives = 60/68 (88%)
Frame = +2
Query: 110 MEQQQQRHRKMIEQPEEADDMQHGPFPVEQLQASGIAAIDVKKLKDAGLCTVESVAYSPR 289
MEQQ+ + +Q EE +++QHGPFPVEQLQASGIAA+DVKKLKDAGLCTVESVAYSPR
Sbjct: 1 MEQQRNQKTVQQQQQEELEEIQHGPFPVEQLQASGIAALDVKKLKDAGLCTVESVAYSPR 60
Query: 290 KDLLQIKG 313
K+LLQIKG
Sbjct: 61 KELLQIKG 68
>ref|XP_003551035.1| PREDICTED: DNA repair protein RAD51 homolog [Glycine max]
Length = 343
Score = 107 bits (266), Expect = 2e-21
Identities = 54/70 (77%), Positives = 61/70 (87%)
Frame = +2
Query: 104 AAMEQQQQRHRKMIEQPEEADDMQHGPFPVEQLQASGIAAIDVKKLKDAGLCTVESVAYS 283
A MEQQQQR +Q +EA+++QHGP PVEQLQASGIAA DVKKLKDAG+CTVESVAY+
Sbjct: 4 ATMEQQQQRP----QQQDEAEEIQHGPLPVEQLQASGIAATDVKKLKDAGICTVESVAYT 59
Query: 284 PRKDLLQIKG 313
PRKDLLQIKG
Sbjct: 60 PRKDLLQIKG 69
>gb|EXC13609.1| DNA repair protein RAD51-like protein [Morus notabilis]
Length = 364
Score = 106 bits (265), Expect = 3e-21
Identities = 51/68 (75%), Positives = 60/68 (88%)
Frame = +2
Query: 110 MEQQQQRHRKMIEQPEEADDMQHGPFPVEQLQASGIAAIDVKKLKDAGLCTVESVAYSPR 289
M +QQR++K +++ EE ++ QHGP PVEQLQASGIA+IDVKKLKDAGLCTVESVAYSPR
Sbjct: 1 MAMEQQRNQKEVQEHEELEEAQHGPSPVEQLQASGIASIDVKKLKDAGLCTVESVAYSPR 60
Query: 290 KDLLQIKG 313
KDLL IKG
Sbjct: 61 KDLLHIKG 68
>ref|XP_002273803.1| PREDICTED: DNA repair protein RAD51 homolog [Vitis vinifera]
gi|297738498|emb|CBI27743.3| unnamed protein product
[Vitis vinifera]
Length = 337
Score = 105 bits (262), Expect = 6e-21
Identities = 53/68 (77%), Positives = 58/68 (85%)
Frame = +2
Query: 110 MEQQQQRHRKMIEQPEEADDMQHGPFPVEQLQASGIAAIDVKKLKDAGLCTVESVAYSPR 289
MEQQ KM + EE +DMQHGPFPVE LQASGIA++D+KKLKDAGLCTVESVAYSPR
Sbjct: 1 MEQQ-----KMAQAHEEVEDMQHGPFPVEHLQASGIASLDIKKLKDAGLCTVESVAYSPR 55
Query: 290 KDLLQIKG 313
KDLLQIKG
Sbjct: 56 KDLLQIKG 63
>ref|XP_004508049.1| PREDICTED: DNA repair protein RAD51 homolog 1-like [Cicer
arietinum]
Length = 340
Score = 105 bits (261), Expect = 8e-21
Identities = 49/65 (75%), Positives = 58/65 (89%)
Frame = +2
Query: 119 QQQRHRKMIEQPEEADDMQHGPFPVEQLQASGIAAIDVKKLKDAGLCTVESVAYSPRKDL 298
+QQR K +Q +E +++QHGP P+EQLQASGIAAIDVKKLKDAG+CTVESVAY+PRKDL
Sbjct: 2 EQQRLEKTAQQQDETEEIQHGPLPIEQLQASGIAAIDVKKLKDAGICTVESVAYTPRKDL 61
Query: 299 LQIKG 313
LQIKG
Sbjct: 62 LQIKG 66
>ref|XP_003542386.1| PREDICTED: DNA repair protein RAD51 homolog 1-like [Glycine max]
Length = 344
Score = 105 bits (261), Expect = 8e-21
Identities = 50/65 (76%), Positives = 59/65 (90%)
Frame = +2
Query: 119 QQQRHRKMIEQPEEADDMQHGPFPVEQLQASGIAAIDVKKLKDAGLCTVESVAYSPRKDL 298
+QQRH+K +Q +EA+++Q GP PVEQLQASGIAA DVKKLKDAG+CTVESVAY+PRKDL
Sbjct: 6 EQQRHQKAPQQQDEAEEIQPGPLPVEQLQASGIAATDVKKLKDAGICTVESVAYTPRKDL 65
Query: 299 LQIKG 313
LQIKG
Sbjct: 66 LQIKG 70
>ref|XP_002516197.1| DNA repair protein rad51, putative [Ricinus communis]
gi|223544683|gb|EEF46199.1| DNA repair protein rad51,
putative [Ricinus communis]
Length = 294
Score = 104 bits (260), Expect = 1e-20
Identities = 54/69 (78%), Positives = 61/69 (88%), Gaps = 1/69 (1%)
Frame = +2
Query: 110 MEQQQQRHRKMIEQPE-EADDMQHGPFPVEQLQASGIAAIDVKKLKDAGLCTVESVAYSP 286
M QQQR ++ +QP+ E D+MQHGPFPVEQLQ SGIAA+DVKKLKDAGLCTVESVAYSP
Sbjct: 1 MAHQQQRQQQ--KQPQAELDEMQHGPFPVEQLQESGIAALDVKKLKDAGLCTVESVAYSP 58
Query: 287 RKDLLQIKG 313
RK+LLQIKG
Sbjct: 59 RKELLQIKG 67
>ref|XP_006344556.1| PREDICTED: DNA repair protein RAD51 homolog [Solanum tuberosum]
Length = 343
Score = 104 bits (259), Expect = 1e-20
Identities = 52/69 (75%), Positives = 61/69 (88%), Gaps = 1/69 (1%)
Frame = +2
Query: 110 MEQQQQRHRK-MIEQPEEADDMQHGPFPVEQLQASGIAAIDVKKLKDAGLCTVESVAYSP 286
MEQQQ R++K M +Q +E +D+QHGP PVEQLQASGIAA+DVKKLKDAGLCTVESV Y+P
Sbjct: 1 MEQQQHRNQKSMQDQNDEIEDVQHGPSPVEQLQASGIAALDVKKLKDAGLCTVESVVYAP 60
Query: 287 RKDLLQIKG 313
RK+LL IKG
Sbjct: 61 RKELLHIKG 69
>ref|XP_007154535.1| hypothetical protein PHAVU_003G126800g [Phaseolus vulgaris]
gi|561027889|gb|ESW26529.1| hypothetical protein
PHAVU_003G126800g [Phaseolus vulgaris]
Length = 344
Score = 103 bits (257), Expect = 2e-20
Identities = 49/65 (75%), Positives = 59/65 (90%)
Frame = +2
Query: 119 QQQRHRKMIEQPEEADDMQHGPFPVEQLQASGIAAIDVKKLKDAGLCTVESVAYSPRKDL 298
+QQR ++ +Q +EA+++QHGP PVEQLQASGIAA DVKKLKDAG+CTVESVAY+PRKDL
Sbjct: 6 EQQRLQRTPQQQDEAEEIQHGPLPVEQLQASGIAATDVKKLKDAGICTVESVAYTPRKDL 65
Query: 299 LQIKG 313
LQIKG
Sbjct: 66 LQIKG 70
>ref|XP_007202345.1| hypothetical protein PRUPE_ppa008236mg [Prunus persica]
gi|462397876|gb|EMJ03544.1| hypothetical protein
PRUPE_ppa008236mg [Prunus persica]
Length = 340
Score = 103 bits (257), Expect = 2e-20
Identities = 49/65 (75%), Positives = 58/65 (89%)
Frame = +2
Query: 119 QQQRHRKMIEQPEEADDMQHGPFPVEQLQASGIAAIDVKKLKDAGLCTVESVAYSPRKDL 298
+QQ ++K +Q +E ++MQHGP PVEQLQ SGIA+IDVKKLKDAGLCTVE+VAYSPRKDL
Sbjct: 2 EQQSNQKTAQQQDEHEEMQHGPVPVEQLQTSGIASIDVKKLKDAGLCTVEAVAYSPRKDL 61
Query: 299 LQIKG 313
LQIKG
Sbjct: 62 LQIKG 66
>gb|EYU28293.1| hypothetical protein MIMGU_mgv1a020539mg [Mimulus guttatus]
Length = 341
Score = 102 bits (253), Expect = 7e-20
Identities = 48/66 (72%), Positives = 57/66 (86%)
Frame = +2
Query: 116 QQQQRHRKMIEQPEEADDMQHGPFPVEQLQASGIAAIDVKKLKDAGLCTVESVAYSPRKD 295
+QQ+R + EQ EE +++ HGP PVEQLQASGIAA+D+KKLKDAGLCTVESVAYSPRK+
Sbjct: 2 EQQKRQKLQQEQQEEVEEVHHGPIPVEQLQASGIAAVDIKKLKDAGLCTVESVAYSPRKE 61
Query: 296 LLQIKG 313
LL IKG
Sbjct: 62 LLLIKG 67
>ref|XP_002443207.1| hypothetical protein SORBIDRAFT_08g015360 [Sorghum bicolor]
gi|241943900|gb|EES17045.1| hypothetical protein
SORBIDRAFT_08g015360 [Sorghum bicolor]
Length = 342
Score = 102 bits (253), Expect = 7e-20
Identities = 49/68 (72%), Positives = 55/68 (80%)
Frame = +2
Query: 110 MEQQQQRHRKMIEQPEEADDMQHGPFPVEQLQASGIAAIDVKKLKDAGLCTVESVAYSPR 289
M H+K+ P E + +HGPFP+EQLQASGIAA+DVKKLKDAGLCTVESVAYSPR
Sbjct: 1 MSSTAAAHQKVAAPPTEEEAPEHGPFPIEQLQASGIAALDVKKLKDAGLCTVESVAYSPR 60
Query: 290 KDLLQIKG 313
KDLLQIKG
Sbjct: 61 KDLLQIKG 68
>ref|XP_006381549.1| hypothetical protein POPTR_0006s13750g [Populus trichocarpa]
gi|550336254|gb|ERP59346.1| hypothetical protein
POPTR_0006s13750g [Populus trichocarpa]
Length = 348
Score = 102 bits (253), Expect = 7e-20
Identities = 49/67 (73%), Positives = 62/67 (92%), Gaps = 2/67 (2%)
Frame = +2
Query: 119 QQQRHRKMI--EQPEEADDMQHGPFPVEQLQASGIAAIDVKKLKDAGLCTVESVAYSPRK 292
+QQR++K + +Q E+ +++QHGPFPVEQLQASGIA++DVKKLKDAGLCTVESVA+SPRK
Sbjct: 2 EQQRNQKAVNQQQHEDHEEVQHGPFPVEQLQASGIASLDVKKLKDAGLCTVESVAFSPRK 61
Query: 293 DLLQIKG 313
+LLQIKG
Sbjct: 62 ELLQIKG 68
>dbj|BAF02935.1| RAD51 homolog [Populus nigra]
Length = 342
Score = 102 bits (253), Expect = 7e-20
Identities = 49/67 (73%), Positives = 62/67 (92%), Gaps = 2/67 (2%)
Frame = +2
Query: 119 QQQRHRKMI--EQPEEADDMQHGPFPVEQLQASGIAAIDVKKLKDAGLCTVESVAYSPRK 292
+QQR++K + +Q E+ +++QHGPFPVEQLQASGIA++DVKKLKDAGLCTVESVA+SPRK
Sbjct: 2 EQQRNQKAVNQQQHEDHEEVQHGPFPVEQLQASGIASLDVKKLKDAGLCTVESVAFSPRK 61
Query: 293 DLLQIKG 313
+LLQIKG
Sbjct: 62 ELLQIKG 68
>ref|XP_004287679.1| PREDICTED: DNA repair protein RAD51 homolog 1-like [Fragaria vesca
subsp. vesca]
Length = 337
Score = 100 bits (250), Expect = 2e-19
Identities = 51/68 (75%), Positives = 58/68 (85%)
Frame = +2
Query: 110 MEQQQQRHRKMIEQPEEADDMQHGPFPVEQLQASGIAAIDVKKLKDAGLCTVESVAYSPR 289
MEQQ K +Q +E ++MQHGP PVEQLQASGIA+IDVKKL+DAGLCTVE+VAYSPR
Sbjct: 1 MEQQ-----KTAQQQDELEEMQHGPVPVEQLQASGIASIDVKKLRDAGLCTVEAVAYSPR 55
Query: 290 KDLLQIKG 313
KDLLQIKG
Sbjct: 56 KDLLQIKG 63
>gb|AFK39468.1| unknown [Medicago truncatula]
Length = 161
Score = 99.8 bits (247), Expect = 4e-19
Identities = 48/66 (72%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Frame = +2
Query: 119 QQQRHRKMIEQ-PEEADDMQHGPFPVEQLQASGIAAIDVKKLKDAGLCTVESVAYSPRKD 295
+QQR K +Q +E +++QHGP PVEQLQASGIAA+D+KKLKDAG+CTVESVAY+PRKD
Sbjct: 2 EQQRLEKTAQQHDQETEEIQHGPLPVEQLQASGIAALDIKKLKDAGICTVESVAYTPRKD 61
Query: 296 LLQIKG 313
LLQIKG
Sbjct: 62 LLQIKG 67
>ref|XP_003609937.1| DNA repair protein RAD51-like protein [Medicago truncatula]
gi|355510992|gb|AES92134.1| DNA repair protein
RAD51-like protein [Medicago truncatula]
Length = 341
Score = 99.8 bits (247), Expect = 4e-19
Identities = 48/66 (72%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Frame = +2
Query: 119 QQQRHRKMIEQ-PEEADDMQHGPFPVEQLQASGIAAIDVKKLKDAGLCTVESVAYSPRKD 295
+QQR K +Q +E +++QHGP PVEQLQASGIAA+D+KKLKDAG+CTVESVAY+PRKD
Sbjct: 2 EQQRLEKTAQQHDQETEEIQHGPLPVEQLQASGIAALDIKKLKDAGICTVESVAYTPRKD 61
Query: 296 LLQIKG 313
LLQIKG
Sbjct: 62 LLQIKG 67