BLASTX nr result
ID: Cocculus23_contig00039359
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00039359
(200 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containi... 110 2e-22
ref|XP_007201718.1| hypothetical protein PRUPE_ppa003482mg [Prun... 103 2e-20
ref|XP_004500791.1| PREDICTED: pentatricopeptide repeat-containi... 95 1e-17
ref|XP_003543566.1| PREDICTED: pentatricopeptide repeat-containi... 95 1e-17
ref|XP_003523513.1| PREDICTED: pentatricopeptide repeat-containi... 93 3e-17
gb|EXB60469.1| hypothetical protein L484_014923 [Morus notabilis] 88 1e-15
ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
ref|XP_007224154.1| hypothetical protein PRUPE_ppa016354mg [Prun... 86 4e-15
ref|XP_003603974.1| Pentatricopeptide repeat-containing protein ... 86 5e-15
ref|XP_002309579.2| hypothetical protein POPTR_0006s26170g [Popu... 86 7e-15
ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containi... 86 7e-15
ref|XP_004301150.1| PREDICTED: pentatricopeptide repeat-containi... 85 9e-15
emb|CBI33742.3| unnamed protein product [Vitis vinifera] 84 2e-14
ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containi... 84 2e-14
emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera] 84 2e-14
ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containi... 84 3e-14
ref|XP_004296063.1| PREDICTED: pentatricopeptide repeat-containi... 83 3e-14
gb|AAS79604.1| putative pentatricopeptide repeat-containing prot... 83 3e-14
ref|XP_006344853.1| PREDICTED: pentatricopeptide repeat-containi... 83 5e-14
>ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera] gi|297744424|emb|CBI37686.3| unnamed
protein product [Vitis vinifera]
Length = 571
Score = 110 bits (276), Expect = 2e-22
Identities = 49/66 (74%), Positives = 56/66 (84%)
Frame = +1
Query: 1 TVTAVLSACRNAGWVKEAYSYFNQMAKRYGIKPRIQHYGCMVDLLARVGHLSNAEQFIKR 180
T+TAVLSACRNAGW E ++YFN M +YGIKP IQHYGCMVDLLAR GHL AE+FI++
Sbjct: 300 TMTAVLSACRNAGWFSEGFAYFNSMWCKYGIKPTIQHYGCMVDLLARTGHLDEAEEFIRK 359
Query: 181 MPIEPD 198
MPIEPD
Sbjct: 360 MPIEPD 365
>ref|XP_007201718.1| hypothetical protein PRUPE_ppa003482mg [Prunus persica]
gi|462397118|gb|EMJ02917.1| hypothetical protein
PRUPE_ppa003482mg [Prunus persica]
Length = 571
Score = 103 bits (258), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = +1
Query: 1 TVTAVLSACRNAGWVKEAYSYFNQMAKRYGIKPRIQHYGCMVDLLARVGHLSNAEQFIKR 180
T+TAVLSACRNAG V E Y+Y M YG++P IQHYGCMVDLLAR GHL AE+FI++
Sbjct: 300 TMTAVLSACRNAGQVAEGYAYLRSMQNEYGVRPTIQHYGCMVDLLARAGHLKEAEEFIRK 359
Query: 181 MPIEPD 198
MPIEPD
Sbjct: 360 MPIEPD 365
>ref|XP_004500791.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cicer arietinum]
Length = 576
Score = 94.7 bits (234), Expect = 1e-17
Identities = 42/66 (63%), Positives = 52/66 (78%)
Frame = +1
Query: 1 TVTAVLSACRNAGWVKEAYSYFNQMAKRYGIKPRIQHYGCMVDLLARVGHLSNAEQFIKR 180
T+TA+LSACRNAG V+E Y +F + KRYG+KP IQH+GC+VDLLAR G L AE FI
Sbjct: 305 TITAILSACRNAGLVREGYMFFGDVQKRYGMKPTIQHFGCLVDLLARGGCLEEAEDFINA 364
Query: 181 MPIEPD 198
MP++PD
Sbjct: 365 MPMKPD 370
>ref|XP_003543566.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 572
Score = 94.7 bits (234), Expect = 1e-17
Identities = 41/66 (62%), Positives = 52/66 (78%)
Frame = +1
Query: 1 TVTAVLSACRNAGWVKEAYSYFNQMAKRYGIKPRIQHYGCMVDLLARVGHLSNAEQFIKR 180
TVTAVL+ACRNAG ++E + F+ + +RYG+KP IQH+GC+VDLLAR G L AE F+
Sbjct: 301 TVTAVLTACRNAGLIREGFMLFSDVQRRYGMKPSIQHFGCLVDLLARAGRLKEAEDFVNA 360
Query: 181 MPIEPD 198
MPIEPD
Sbjct: 361 MPIEPD 366
>ref|XP_003523513.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 542
Score = 93.2 bits (230), Expect = 3e-17
Identities = 40/66 (60%), Positives = 51/66 (77%)
Frame = +1
Query: 1 TVTAVLSACRNAGWVKEAYSYFNQMAKRYGIKPRIQHYGCMVDLLARVGHLSNAEQFIKR 180
TVT VL+ACRNAG ++E + F+ + +RYG+KP IQH+GC+VDLLAR G L AE F+
Sbjct: 271 TVTTVLTACRNAGLIREGFMLFSDVQRRYGMKPSIQHFGCLVDLLARAGRLKEAEDFVNA 330
Query: 181 MPIEPD 198
MPIEPD
Sbjct: 331 MPIEPD 336
>gb|EXB60469.1| hypothetical protein L484_014923 [Morus notabilis]
Length = 851
Score = 88.2 bits (217), Expect = 1e-15
Identities = 41/66 (62%), Positives = 49/66 (74%)
Frame = +1
Query: 1 TVTAVLSACRNAGWVKEAYSYFNQMAKRYGIKPRIQHYGCMVDLLARVGHLSNAEQFIKR 180
T TA+LSAC + G V E +SYFN+M+ Y I P IQHYGCMVDLL RVG L A +FI+
Sbjct: 598 TFTALLSACSHGGLVSEGFSYFNKMSSVYNITPNIQHYGCMVDLLGRVGQLDEALKFIEL 657
Query: 181 MPIEPD 198
MPI+PD
Sbjct: 658 MPIKPD 663
>ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 87.0 bits (214), Expect = 2e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 13 VLSACRNAGWVKEAYSYFNQMAKRYGIKPRIQHYGCMVDLLARVGHLSNAEQFIKRMPIE 192
+LSAC +AG V+E S+F+ M K G++PRI+HYGCMVDLL R GHL AE+ I+ MPIE
Sbjct: 377 ILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIE 436
Query: 193 PD 198
PD
Sbjct: 437 PD 438
>ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 87.0 bits (214), Expect = 2e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 13 VLSACRNAGWVKEAYSYFNQMAKRYGIKPRIQHYGCMVDLLARVGHLSNAEQFIKRMPIE 192
+LSAC +AG V+E S+F+ M K G++PRI+HYGCMVDLL R GHL AE+ I+ MPIE
Sbjct: 377 ILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIE 436
Query: 193 PD 198
PD
Sbjct: 437 PD 438
>ref|XP_007224154.1| hypothetical protein PRUPE_ppa016354mg [Prunus persica]
gi|462421090|gb|EMJ25353.1| hypothetical protein
PRUPE_ppa016354mg [Prunus persica]
Length = 733
Score = 86.3 bits (212), Expect = 4e-15
Identities = 39/66 (59%), Positives = 48/66 (72%)
Frame = +1
Query: 1 TVTAVLSACRNAGWVKEAYSYFNQMAKRYGIKPRIQHYGCMVDLLARVGHLSNAEQFIKR 180
T A+LSAC + G V E Y+YFN+M+ Y I P+IQHYGCMVDLL R G L A +FI+
Sbjct: 480 TFVALLSACSHGGLVNEGYTYFNKMSSVYSIVPKIQHYGCMVDLLGRAGRLDQAVRFIES 539
Query: 181 MPIEPD 198
MPI+PD
Sbjct: 540 MPIKPD 545
>ref|XP_003603974.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493022|gb|AES74225.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 566
Score = 85.9 bits (211), Expect = 5e-15
Identities = 39/66 (59%), Positives = 49/66 (74%)
Frame = +1
Query: 1 TVTAVLSACRNAGWVKEAYSYFNQMAKRYGIKPRIQHYGCMVDLLARVGHLSNAEQFIKR 180
T+ VLSA RNAG V+E Y +FN + KRY +KP I+H+GCMVDLLA+ G L AE FI
Sbjct: 295 TIMVVLSAYRNAGLVREGYMFFNDVQKRYSMKPNIKHFGCMVDLLAKGGCLEEAEDFINA 354
Query: 181 MPIEPD 198
MP++PD
Sbjct: 355 MPMKPD 360
>ref|XP_002309579.2| hypothetical protein POPTR_0006s26170g [Populus trichocarpa]
gi|550337114|gb|EEE93102.2| hypothetical protein
POPTR_0006s26170g [Populus trichocarpa]
Length = 854
Score = 85.5 bits (210), Expect = 7e-15
Identities = 39/66 (59%), Positives = 46/66 (69%)
Frame = +1
Query: 1 TVTAVLSACRNAGWVKEAYSYFNQMAKRYGIKPRIQHYGCMVDLLARVGHLSNAEQFIKR 180
T A+L+AC + G V E Y YFN++ Y I P I HYGCMVDLL RVGHL +FI+R
Sbjct: 603 TFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIER 662
Query: 181 MPIEPD 198
MPIEPD
Sbjct: 663 MPIEPD 668
>ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
chloroplastic [Vitis vinifera]
gi|297733984|emb|CBI15231.3| unnamed protein product
[Vitis vinifera]
Length = 893
Score = 85.5 bits (210), Expect = 7e-15
Identities = 40/66 (60%), Positives = 45/66 (68%)
Frame = +1
Query: 1 TVTAVLSACRNAGWVKEAYSYFNQMAKRYGIKPRIQHYGCMVDLLARVGHLSNAEQFIKR 180
T VLSAC + G V+E YS+ N MAK YGI+P HY CMVDLL R G L AE+FI
Sbjct: 753 TFVGVLSACSHNGMVEEGYSHLNSMAKEYGIEPGYYHYACMVDLLGRSGRLKEAERFINN 812
Query: 181 MPIEPD 198
MPIEPD
Sbjct: 813 MPIEPD 818
>ref|XP_004301150.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 892
Score = 85.1 bits (209), Expect = 9e-15
Identities = 41/66 (62%), Positives = 46/66 (69%)
Frame = +1
Query: 1 TVTAVLSACRNAGWVKEAYSYFNQMAKRYGIKPRIQHYGCMVDLLARVGHLSNAEQFIKR 180
T AVLSAC + G V+EAY YFN MA YGIKP HY CMVD+L R G L AE+FI
Sbjct: 752 TFVAVLSACSHNGLVEEAYFYFNSMASDYGIKPGYHHYACMVDVLGRSGRLKEAERFIIN 811
Query: 181 MPIEPD 198
MPIEP+
Sbjct: 812 MPIEPN 817
>emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 84.3 bits (207), Expect = 2e-14
Identities = 35/66 (53%), Positives = 47/66 (71%)
Frame = +1
Query: 1 TVTAVLSACRNAGWVKEAYSYFNQMAKRYGIKPRIQHYGCMVDLLARVGHLSNAEQFIKR 180
T +LSAC ++GWV E + FN+M YGI+P+I+HYGCMV+LL R GH+ A + +K
Sbjct: 293 TFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKN 352
Query: 181 MPIEPD 198
M IEPD
Sbjct: 353 MNIEPD 358
>ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 84.3 bits (207), Expect = 2e-14
Identities = 35/66 (53%), Positives = 47/66 (71%)
Frame = +1
Query: 1 TVTAVLSACRNAGWVKEAYSYFNQMAKRYGIKPRIQHYGCMVDLLARVGHLSNAEQFIKR 180
T +LSAC ++GWV E + FN+M YGI+P+I+HYGCMV+LL R GH+ A + +K
Sbjct: 359 TFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKN 418
Query: 181 MPIEPD 198
M IEPD
Sbjct: 419 MNIEPD 424
>emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 84.3 bits (207), Expect = 2e-14
Identities = 35/66 (53%), Positives = 47/66 (71%)
Frame = +1
Query: 1 TVTAVLSACRNAGWVKEAYSYFNQMAKRYGIKPRIQHYGCMVDLLARVGHLSNAEQFIKR 180
T +LSAC ++GWV E + FN+M YGI+P+I+HYGCMV+LL R GH+ A + +K
Sbjct: 306 TFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKN 365
Query: 181 MPIEPD 198
M IEPD
Sbjct: 366 MNIEPD 371
>ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 83.6 bits (205), Expect = 3e-14
Identities = 37/66 (56%), Positives = 47/66 (71%)
Frame = +1
Query: 1 TVTAVLSACRNAGWVKEAYSYFNQMAKRYGIKPRIQHYGCMVDLLARVGHLSNAEQFIKR 180
T A+LSAC +AG V E S+FN M G+KP+I+HYGCMVDLL R G+L AE+ I
Sbjct: 369 TYIAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILN 428
Query: 181 MPIEPD 198
MP++PD
Sbjct: 429 MPMKPD 434
>ref|XP_004296063.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Fragaria vesca subsp. vesca]
Length = 867
Score = 83.2 bits (204), Expect = 3e-14
Identities = 36/66 (54%), Positives = 46/66 (69%)
Frame = +1
Query: 1 TVTAVLSACRNAGWVKEAYSYFNQMAKRYGIKPRIQHYGCMVDLLARVGHLSNAEQFIKR 180
T ++L+AC ++G V + YF+ M K YGIKP + HYGCMVDLL R GHL A FIK
Sbjct: 598 TFVSLLAACSHSGLVNKGELYFHMMQKEYGIKPGLNHYGCMVDLLGRAGHLDKAYSFIKT 657
Query: 181 MPIEPD 198
MP++PD
Sbjct: 658 MPVQPD 663
>gb|AAS79604.1| putative pentatricopeptide repeat-containing protein [Ipomoea
trifida] gi|118562903|dbj|BAF37793.1| hypothetical
protein [Ipomoea trifida]
Length = 575
Score = 83.2 bits (204), Expect = 3e-14
Identities = 39/65 (60%), Positives = 51/65 (78%)
Frame = +1
Query: 4 VTAVLSACRNAGWVKEAYSYFNQMAKRYGIKPRIQHYGCMVDLLARVGHLSNAEQFIKRM 183
+TAVLSA RNAG V E +F ++ K++ IKP IQHYGC+VD+L R G L +AE+FI++M
Sbjct: 306 ITAVLSAYRNAGLVSEGLLFFRRL-KKHKIKPTIQHYGCVVDMLTRAGRLKDAEEFIRKM 364
Query: 184 PIEPD 198
PIEPD
Sbjct: 365 PIEPD 369
>ref|XP_006344853.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Solanum tuberosum]
Length = 745
Score = 82.8 bits (203), Expect = 5e-14
Identities = 39/66 (59%), Positives = 44/66 (66%)
Frame = +1
Query: 1 TVTAVLSACRNAGWVKEAYSYFNQMAKRYGIKPRIQHYGCMVDLLARVGHLSNAEQFIKR 180
T AVL ACR+ G V E SYFN M + Y ++P I+HYGCMVDLLAR G L AE I
Sbjct: 476 TFVAVLGACRHMGLVDEGRSYFNAMTRHYNVEPNIKHYGCMVDLLARAGLLKEAETLIDS 535
Query: 181 MPIEPD 198
MPI PD
Sbjct: 536 MPIAPD 541