BLASTX nr result
ID: Cocculus23_contig00039332
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00039332
(452 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containi... 128 7e-28
ref|XP_006491677.1| PREDICTED: pentatricopeptide repeat-containi... 118 7e-25
ref|XP_006428441.1| hypothetical protein CICLE_v10011174mg [Citr... 118 7e-25
ref|XP_007027438.1| Tetratricopeptide repeat-like superfamily pr... 106 4e-21
ref|XP_006842814.1| hypothetical protein AMTR_s00081p00056740 [A... 87 2e-15
ref|XP_007206426.1| hypothetical protein PRUPE_ppa001946mg [Prun... 86 7e-15
ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containi... 84 2e-14
ref|XP_003541414.2| PREDICTED: pentatricopeptide repeat-containi... 83 3e-14
ref|XP_006847830.1| hypothetical protein AMTR_s00029p00051540 [A... 83 3e-14
emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera] 83 4e-14
ref|XP_006847904.1| hypothetical protein AMTR_s00029p00110030 [A... 80 2e-13
gb|EXB96697.1| hypothetical protein L484_011738 [Morus notabilis] 80 3e-13
ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containi... 80 3e-13
emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera] 80 3e-13
emb|CBI35029.3| unnamed protein product [Vitis vinifera] 79 5e-13
ref|XP_002276684.1| PREDICTED: putative pentatricopeptide repeat... 79 5e-13
emb|CBI15973.3| unnamed protein product [Vitis vinifera] 79 6e-13
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi... 79 6e-13
emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera] 79 6e-13
ref|XP_006425654.1| hypothetical protein CICLE_v10025166mg [Citr... 79 8e-13
>ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 128 bits (322), Expect = 7e-28
Identities = 60/97 (61%), Positives = 82/97 (84%)
Frame = +1
Query: 133 LLEHTSPDFLLDSCTTIKQALQIHAQIILHGLHHRVSSLSKLISFFALFGSQDSLDYARL 312
LLE+ S LL+SC + KQ LQIHAQ I++GLHH++ S+S+LISFF+L GS+D LD++RL
Sbjct: 6 LLENPSSLCLLESCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRL 65
Query: 313 IYSQIVQPNVFIWNTMIRGYSRSDSPHESMVLFKSMM 423
++SQI PN+F+WNTMIRGYSRSD+P E++VL+ SM+
Sbjct: 66 LFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMI 102
>ref|XP_006491677.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like isoform X1 [Citrus sinensis]
gi|568877302|ref|XP_006491678.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like isoform X2 [Citrus sinensis]
gi|568877304|ref|XP_006491679.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like isoform X3 [Citrus sinensis]
gi|568877306|ref|XP_006491680.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like isoform X4 [Citrus sinensis]
Length = 719
Score = 118 bits (296), Expect = 7e-25
Identities = 58/98 (59%), Positives = 80/98 (81%)
Frame = +1
Query: 130 LLLEHTSPDFLLDSCTTIKQALQIHAQIILHGLHHRVSSLSKLISFFALFGSQDSLDYAR 309
L+LEH+S LL+SC ++KQALQIH QI+ GL+H +SS S+LISFFAL G ++ L +R
Sbjct: 4 LVLEHSSLLALLESCKSLKQALQIHGQIVHSGLNHHISS-SQLISFFALSGCKNGLFRSR 62
Query: 310 LIYSQIVQPNVFIWNTMIRGYSRSDSPHESMVLFKSMM 423
+++SQI PN+FIWNT++RGYSRSDSP E++VL+ SM+
Sbjct: 63 ILFSQIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSML 100
>ref|XP_006428441.1| hypothetical protein CICLE_v10011174mg [Citrus clementina]
gi|567871705|ref|XP_006428442.1| hypothetical protein
CICLE_v10011174mg [Citrus clementina]
gi|557530498|gb|ESR41681.1| hypothetical protein
CICLE_v10011174mg [Citrus clementina]
gi|557530499|gb|ESR41682.1| hypothetical protein
CICLE_v10011174mg [Citrus clementina]
Length = 719
Score = 118 bits (296), Expect = 7e-25
Identities = 58/98 (59%), Positives = 80/98 (81%)
Frame = +1
Query: 130 LLLEHTSPDFLLDSCTTIKQALQIHAQIILHGLHHRVSSLSKLISFFALFGSQDSLDYAR 309
L+LEH+S LL+SC ++KQALQIH QI+ GL+H +SS S+LISFFAL G ++ L +R
Sbjct: 4 LVLEHSSLLALLESCKSLKQALQIHGQIVHSGLNHHISS-SQLISFFALSGCKNGLFRSR 62
Query: 310 LIYSQIVQPNVFIWNTMIRGYSRSDSPHESMVLFKSMM 423
+++SQI PN+FIWNT++RGYSRSDSP E++VL+ SM+
Sbjct: 63 ILFSQIDNPNIFIWNTLMRGYSRSDSPQEALVLYTSML 100
>ref|XP_007027438.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao] gi|508716043|gb|EOY07940.1|
Tetratricopeptide repeat-like superfamily protein,
putative [Theobroma cacao]
Length = 756
Score = 106 bits (264), Expect = 4e-21
Identities = 46/89 (51%), Positives = 69/89 (77%)
Frame = +1
Query: 157 FLLDSCTTIKQALQIHAQIILHGLHHRVSSLSKLISFFALFGSQDSLDYARLIYSQIVQP 336
F +SC +IKQA Q+HAQIIL+G HH+ +S+LISFFAL GS+ LDY+++++ QI P
Sbjct: 49 FFRESCKSIKQAFQVHAQIILNGYHHQFFPISRLISFFALLGSRAGLDYSQILFCQIEHP 108
Query: 337 NVFIWNTMIRGYSRSDSPHESMVLFKSMM 423
N F++NTMIRG+S S+ P ++++ + SM+
Sbjct: 109 NQFMYNTMIRGFSHSEFPEKALIFYSSML 137
>ref|XP_006842814.1| hypothetical protein AMTR_s00081p00056740 [Amborella trichopoda]
gi|548844970|gb|ERN04489.1| hypothetical protein
AMTR_s00081p00056740 [Amborella trichopoda]
Length = 406
Score = 87.4 bits (215), Expect = 2e-15
Identities = 44/93 (47%), Positives = 64/93 (68%)
Frame = +1
Query: 157 FLLDSCTTIKQALQIHAQIILHGLHHRVSSLSKLISFFALFGSQDSLDYARLIYSQIVQP 336
FLL SCT++KQ QIHAQ GLH+ +LSK+I F ++ D LD+A L++ I +P
Sbjct: 38 FLLQSCTSMKQLKQIHAQFFKTGLHNDQFALSKIIEFCSISPFGD-LDFAHLLFGTISEP 96
Query: 337 NVFIWNTMIRGYSRSDSPHESMVLFKSMMICAT 435
N FIWNT+IRG+S S +P +S+ L+ +M++ T
Sbjct: 97 NQFIWNTLIRGHSLSSTPMDSLSLYIAMLLSLT 129
>ref|XP_007206426.1| hypothetical protein PRUPE_ppa001946mg [Prunus persica]
gi|462402068|gb|EMJ07625.1| hypothetical protein
PRUPE_ppa001946mg [Prunus persica]
Length = 738
Score = 85.5 bits (210), Expect = 7e-15
Identities = 44/88 (50%), Positives = 60/88 (68%)
Frame = +1
Query: 160 LLDSCTTIKQALQIHAQIILHGLHHRVSSLSKLISFFALFGSQDSLDYARLIYSQIVQPN 339
L+D CT+IKQ Q+HAQ++ G+ S SKLI+ AL S SLDYAR ++ QI QPN
Sbjct: 36 LIDQCTSIKQLKQVHAQMLRTGVLFDPYSASKLITASAL-SSFSSLDYARQVFDQIPQPN 94
Query: 340 VFIWNTMIRGYSRSDSPHESMVLFKSMM 423
V+ WNT+IR Y+ S P ES+++F M+
Sbjct: 95 VYTWNTLIRAYASSSDPAESILVFLDML 122
>ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 84.3 bits (207), Expect = 2e-14
Identities = 43/94 (45%), Positives = 64/94 (68%)
Frame = +1
Query: 142 HTSPDFLLDSCTTIKQALQIHAQIILHGLHHRVSSLSKLISFFALFGSQDSLDYARLIYS 321
H + LLD C+++K+ +HAQIILHGL +V +L KL+S L + L YA L++
Sbjct: 39 HQTLHHLLDQCSSMKRLKLVHAQIILHGLAAQVVTLGKLLS---LCVQEGDLRYAHLLFD 95
Query: 322 QIVQPNVFIWNTMIRGYSRSDSPHESMVLFKSMM 423
QI QPN F++N +IRGYS S+ P +S++LF+ M+
Sbjct: 96 QIPQPNKFMYNHLIRGYSNSNDPMKSLLLFRQMV 129
>ref|XP_003541414.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 636
Score = 83.2 bits (204), Expect = 3e-14
Identities = 40/88 (45%), Positives = 63/88 (71%)
Frame = +1
Query: 160 LLDSCTTIKQALQIHAQIILHGLHHRVSSLSKLISFFALFGSQDSLDYARLIYSQIVQPN 339
LL SC TI QALQIHAQ+++ G HH ++ LISFFA S ++L ++ L+++QI P+
Sbjct: 7 LLSSCRTIHQALQIHAQMVVTGRHHDPFLMTPLISFFAAANS-NALHHSHLLFTQIPNPD 65
Query: 340 VFIWNTMIRGYSRSDSPHESMVLFKSMM 423
+F++N +IR +S S +PH ++ L+K M+
Sbjct: 66 LFLFNLIIRAFSLSQTPHNALSLYKKML 93
>ref|XP_006847830.1| hypothetical protein AMTR_s00029p00051540 [Amborella trichopoda]
gi|548851135|gb|ERN09411.1| hypothetical protein
AMTR_s00029p00051540 [Amborella trichopoda]
Length = 181
Score = 83.2 bits (204), Expect = 3e-14
Identities = 44/93 (47%), Positives = 64/93 (68%)
Frame = +1
Query: 160 LLDSCTTIKQALQIHAQIILHGLHHRVSSLSKLISFFALFGSQDSLDYARLIYSQIVQPN 339
LLDSCT + Q QIHA II+ GL + S+LI+F A+ S+D+A+LI++QI +P+
Sbjct: 17 LLDSCTHMNQLKQIHAHIIIQGLSRSNFTGSRLIAFCAV-SPYASIDHAKLIFAQIQEPS 75
Query: 340 VFIWNTMIRGYSRSDSPHESMVLFKSMMICATT 438
+F WN+MIRG S S +P E++V F S ++C T
Sbjct: 76 IFTWNSMIRGLSMSSNPKEAIV-FYSQLLCKNT 107
>emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]
Length = 688
Score = 82.8 bits (203), Expect = 4e-14
Identities = 44/97 (45%), Positives = 67/97 (69%)
Frame = +1
Query: 151 PDFLLDSCTTIKQALQIHAQIILHGLHHRVSSLSKLISFFALFGSQDSLDYARLIYSQIV 330
P L + C++++ +HAQIILHGL + +L KLISF A+ + D L YA+ ++ QI
Sbjct: 117 PARLCEKCSSMRGLKLLHAQIILHGLTNETLTLGKLISFCAVDDAGD-LQYAQRMFDQIP 175
Query: 331 QPNVFIWNTMIRGYSRSDSPHESMVLFKSMMICATTS 441
QPN F++N++IRGYS SD P ++++LF+ MIC+ S
Sbjct: 176 QPNKFMYNSLIRGYSNSDDPIDAVLLFR-RMICSGLS 211
>ref|XP_006847904.1| hypothetical protein AMTR_s00029p00110030 [Amborella trichopoda]
gi|548851209|gb|ERN09485.1| hypothetical protein
AMTR_s00029p00110030 [Amborella trichopoda]
Length = 305
Score = 80.5 bits (197), Expect = 2e-13
Identities = 39/89 (43%), Positives = 60/89 (67%)
Frame = +1
Query: 157 FLLDSCTTIKQALQIHAQIILHGLHHRVSSLSKLISFFALFGSQDSLDYARLIYSQIVQP 336
FL+ CTTIKQ QIH+ +I GL H ++SK+I F A+ +L+YA +++Q+ P
Sbjct: 11 FLIKRCTTIKQVHQIHSLMITTGLSHCNFAMSKIIHFCAV-SDPKNLEYALSLFNQVTNP 69
Query: 337 NVFIWNTMIRGYSRSDSPHESMVLFKSMM 423
FIWNTMIRG+S S +P +++++F M+
Sbjct: 70 TNFIWNTMIRGFSISQNPQKAILIFTKML 98
>gb|EXB96697.1| hypothetical protein L484_011738 [Morus notabilis]
Length = 610
Score = 80.1 bits (196), Expect = 3e-13
Identities = 38/80 (47%), Positives = 58/80 (72%)
Frame = +1
Query: 181 IKQALQIHAQIILHGLHHRVSSLSKLISFFALFGSQDSLDYARLIYSQIVQPNVFIWNTM 360
+++ QIHAQII+HGL + +L K ISF A+ + D L YARL++ +I +PN F++N++
Sbjct: 1 MRELKQIHAQIIIHGLSKEILTLGKFISFCAVSDTGD-LRYARLVFDRIQEPNKFMYNSL 59
Query: 361 IRGYSRSDSPHESMVLFKSM 420
IRGYS SD P S++L++ M
Sbjct: 60 IRGYSNSDDPETSLLLYRRM 79
>ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 80.1 bits (196), Expect = 3e-13
Identities = 48/104 (46%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Frame = +1
Query: 124 FLLLLEHTSPDFLLDSCTTIKQALQIHAQIILHGLHHRVSSLSKLISFFAL--FGSQDSL 297
+ LL H S LL +C + + QIH+QII GLH+ +LSKLI F A+ FG+ L
Sbjct: 27 YKLLQNHPSLT-LLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGN---L 82
Query: 298 DYARLIYSQIVQPNVFIWNTMIRGYSRSDSPHESMVLFKSMMIC 429
YA L++ I QPN FIWNTMIRG S S SP ++ + M++C
Sbjct: 83 SYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLC 126
>emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 80.1 bits (196), Expect = 3e-13
Identities = 48/104 (46%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Frame = +1
Query: 124 FLLLLEHTSPDFLLDSCTTIKQALQIHAQIILHGLHHRVSSLSKLISFFAL--FGSQDSL 297
+ LL H S LL +C + + QIH+QII GLH+ +LSKLI F A+ FG+ L
Sbjct: 27 YKLLQNHPSLT-LLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGN---L 82
Query: 298 DYARLIYSQIVQPNVFIWNTMIRGYSRSDSPHESMVLFKSMMIC 429
YA L++ I QPN FIWNTMIRG S S SP ++ + M++C
Sbjct: 83 SYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLC 126
>emb|CBI35029.3| unnamed protein product [Vitis vinifera]
Length = 1596
Score = 79.3 bits (194), Expect = 5e-13
Identities = 43/88 (48%), Positives = 59/88 (67%)
Frame = +1
Query: 160 LLDSCTTIKQALQIHAQIILHGLHHRVSSLSKLISFFALFGSQDSLDYARLIYSQIVQPN 339
L SC+ ++Q IHA I++GLH ++SKLISF AL S SL YA LI+SQI PN
Sbjct: 10 LAQSCSNMRQFKAIHALFIVNGLHLNNYAISKLISFCALSNS-GSLSYASLIFSQIQNPN 68
Query: 340 VFIWNTMIRGYSRSDSPHESMVLFKSMM 423
+F +NT+IR YSRS +P ++ F+ M+
Sbjct: 69 LFAYNTLIRAYSRSSTPQLALHYFQLML 96
>ref|XP_002276684.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g28640-like [Vitis vinifera]
Length = 511
Score = 79.3 bits (194), Expect = 5e-13
Identities = 43/88 (48%), Positives = 59/88 (67%)
Frame = +1
Query: 160 LLDSCTTIKQALQIHAQIILHGLHHRVSSLSKLISFFALFGSQDSLDYARLIYSQIVQPN 339
L SC+ ++Q IHA I++GLH ++SKLISF AL S SL YA LI+SQI PN
Sbjct: 10 LAQSCSNMRQFKAIHALFIVNGLHLNNYAISKLISFCALSNS-GSLSYASLIFSQIQNPN 68
Query: 340 VFIWNTMIRGYSRSDSPHESMVLFKSMM 423
+F +NT+IR YSRS +P ++ F+ M+
Sbjct: 69 LFAYNTLIRAYSRSSTPQLALHYFQLML 96
>emb|CBI15973.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 79.0 bits (193), Expect = 6e-13
Identities = 39/88 (44%), Positives = 58/88 (65%)
Frame = +1
Query: 160 LLDSCTTIKQALQIHAQIILHGLHHRVSSLSKLISFFALFGSQDSLDYARLIYSQIVQPN 339
L+D C+ KQ QIHAQ++ GL S S+LI+ AL SLDYA+ ++ QI PN
Sbjct: 41 LIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAAL-SPFPSLDYAQQVFDQIPHPN 99
Query: 340 VFIWNTMIRGYSRSDSPHESMVLFKSMM 423
++ WNT+IR Y+ S +PH+S+++F M+
Sbjct: 100 LYTWNTLIRAYASSSNPHQSLLIFLRML 127
>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 79.0 bits (193), Expect = 6e-13
Identities = 39/88 (44%), Positives = 58/88 (65%)
Frame = +1
Query: 160 LLDSCTTIKQALQIHAQIILHGLHHRVSSLSKLISFFALFGSQDSLDYARLIYSQIVQPN 339
L+D C+ KQ QIHAQ++ GL S S+LI+ AL SLDYA+ ++ QI PN
Sbjct: 41 LIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAAL-SPFPSLDYAQQVFDQIPHPN 99
Query: 340 VFIWNTMIRGYSRSDSPHESMVLFKSMM 423
++ WNT+IR Y+ S +PH+S+++F M+
Sbjct: 100 LYTWNTLIRAYASSSNPHQSLLIFLRML 127
>emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 79.0 bits (193), Expect = 6e-13
Identities = 39/88 (44%), Positives = 58/88 (65%)
Frame = +1
Query: 160 LLDSCTTIKQALQIHAQIILHGLHHRVSSLSKLISFFALFGSQDSLDYARLIYSQIVQPN 339
L+D C+ KQ QIHAQ++ GL S S+LI+ AL SLDYA+ ++ QI PN
Sbjct: 41 LIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAAL-SPFPSLDYAQQVFDQIPHPN 99
Query: 340 VFIWNTMIRGYSRSDSPHESMVLFKSMM 423
++ WNT+IR Y+ S +PH+S+++F M+
Sbjct: 100 LYTWNTLIRAYASSSNPHQSLLIFLRML 127
>ref|XP_006425654.1| hypothetical protein CICLE_v10025166mg [Citrus clementina]
gi|568824869|ref|XP_006466814.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g66520-like [Citrus sinensis]
gi|557527644|gb|ESR38894.1| hypothetical protein
CICLE_v10025166mg [Citrus clementina]
Length = 622
Score = 78.6 bits (192), Expect = 8e-13
Identities = 38/105 (36%), Positives = 68/105 (64%)
Frame = +1
Query: 109 PLNTRFLLLLEHTSPDFLLDSCTTIKQALQIHAQIILHGLHHRVSSLSKLISFFALFGSQ 288
P+N +F L T LL+ C+ +++ QIHAQ+ GL +S+L++F F +
Sbjct: 8 PMN-QFSLESNTTHTLSLLNRCSYMEELKQIHAQMFKKGLTVNTILVSRLLAF-CTFSNS 65
Query: 289 DSLDYARLIYSQIVQPNVFIWNTMIRGYSRSDSPHESMVLFKSMM 423
SL YA++++ +I++PN F+WNTM+RGY+ S P ++++L++ M+
Sbjct: 66 GSLAYAQMVFDRIIKPNTFMWNTMVRGYADSSEPEQALLLYRQML 110