BLASTX nr result
ID: Cocculus23_contig00039244
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00039244
(283 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003601650.1| Small subunit processome component-like prot... 91 2e-16
ref|XP_002263943.2| PREDICTED: uncharacterized protein LOC100255... 87 3e-15
emb|CBI17281.3| unnamed protein product [Vitis vinifera] 87 3e-15
emb|CAN75046.1| hypothetical protein VITISV_023142 [Vitis vinifera] 87 3e-15
ref|XP_006601933.1| PREDICTED: small subunit processome componen... 86 7e-15
ref|XP_004492742.1| PREDICTED: small subunit processome componen... 85 9e-15
ref|XP_002518041.1| conserved hypothetical protein [Ricinus comm... 84 3e-14
ref|XP_007034248.1| ARM repeat superfamily protein, putative [Th... 83 5e-14
gb|EXC21920.1| hypothetical protein L484_011085 [Morus notabilis] 80 3e-13
ref|XP_007163660.1| hypothetical protein PHAVU_001G253000g, part... 80 4e-13
ref|XP_007216149.1| hypothetical protein PRUPE_ppa015122mg [Prun... 78 1e-12
ref|XP_006489856.1| PREDICTED: small subunit processome componen... 77 3e-12
ref|XP_006489855.1| PREDICTED: small subunit processome componen... 77 3e-12
ref|XP_006489854.1| PREDICTED: small subunit processome componen... 77 3e-12
ref|XP_006421008.1| hypothetical protein CICLE_v10004117mg [Citr... 77 3e-12
ref|XP_006369815.1| hypothetical protein POPTR_0001s32620g [Popu... 77 3e-12
ref|XP_004305310.1| PREDICTED: small subunit processome componen... 76 4e-12
ref|XP_007214892.1| hypothetical protein PRUPE_ppa000015mg [Prun... 76 4e-12
ref|XP_006360968.1| PREDICTED: small subunit processome componen... 74 2e-11
ref|XP_004247966.1| PREDICTED: small subunit processome componen... 73 5e-11
>ref|XP_003601650.1| Small subunit processome component-like protein [Medicago truncatula]
gi|355490698|gb|AES71901.1| Small subunit processome
component-like protein [Medicago truncatula]
Length = 2733
Score = 90.5 bits (223), Expect = 2e-16
Identities = 43/91 (47%), Positives = 60/91 (65%), Gaps = 2/91 (2%)
Frame = -3
Query: 269 LRPISYGNKVSN--NCFELIYEGLEEEYQASNFAGYFMVDTIEDISWKKRCGFLHVTEDI 96
++P+ K N F + G E+QAS+ YF +D I +SWKK+ GFLHV EDI
Sbjct: 1054 IKPLQIVEKTDGPANLFWTLPIGCTSEFQASSLLEYFTLDNIATLSWKKKYGFLHVIEDI 1113
Query: 95 LNSFDELHLRPFLSSLMGIVIRMLESCTMTI 3
+ FDELH+RPFL L+G V+R+LESCT+++
Sbjct: 1114 VGVFDELHIRPFLDLLVGCVVRLLESCTLSL 1144
>ref|XP_002263943.2| PREDICTED: uncharacterized protein LOC100255444 [Vitis vinifera]
Length = 3196
Score = 86.7 bits (213), Expect = 3e-15
Identities = 43/93 (46%), Positives = 58/93 (62%)
Frame = -3
Query: 281 LIMHLRPISYGNKVSNNCFELIYEGLEEEYQASNFAGYFMVDTIEDISWKKRCGFLHVTE 102
L+ L IS G+ + + F +E ++QA N +F VD I +SWKKR GFLHV E
Sbjct: 620 LLKPLLSISKGSDTTADWFWSSHENYMNDFQAFNVLKFFTVDNINSLSWKKRYGFLHVIE 679
Query: 101 DILNSFDELHLRPFLSSLMGIVIRMLESCTMTI 3
D+L FDE H+ PFL LMG V+R+L SCT ++
Sbjct: 680 DVLEVFDEFHVIPFLDLLMGCVVRVLGSCTSSL 712
>emb|CBI17281.3| unnamed protein product [Vitis vinifera]
Length = 2629
Score = 86.7 bits (213), Expect = 3e-15
Identities = 43/93 (46%), Positives = 58/93 (62%)
Frame = -3
Query: 281 LIMHLRPISYGNKVSNNCFELIYEGLEEEYQASNFAGYFMVDTIEDISWKKRCGFLHVTE 102
L+ L IS G+ + + F +E ++QA N +F VD I +SWKKR GFLHV E
Sbjct: 1016 LLKPLLSISKGSDTTADWFWSSHENYMNDFQAFNVLKFFTVDNINSLSWKKRYGFLHVIE 1075
Query: 101 DILNSFDELHLRPFLSSLMGIVIRMLESCTMTI 3
D+L FDE H+ PFL LMG V+R+L SCT ++
Sbjct: 1076 DVLEVFDEFHVIPFLDLLMGCVVRVLGSCTSSL 1108
>emb|CAN75046.1| hypothetical protein VITISV_023142 [Vitis vinifera]
Length = 2461
Score = 86.7 bits (213), Expect = 3e-15
Identities = 43/93 (46%), Positives = 58/93 (62%)
Frame = -3
Query: 281 LIMHLRPISYGNKVSNNCFELIYEGLEEEYQASNFAGYFMVDTIEDISWKKRCGFLHVTE 102
L+ L IS G+ + + F +E ++QA N +F VD I +SWKKR GFLHV E
Sbjct: 740 LLKPLLSISKGSDTTADWFWSSHENYMNDFQAFNVLKFFTVDNINSLSWKKRYGFLHVIE 799
Query: 101 DILNSFDELHLRPFLSSLMGIVIRMLESCTMTI 3
D+L FDE H+ PFL LMG V+R+L SCT ++
Sbjct: 800 DVLEVFDEFHVIPFLDLLMGCVVRVLGSCTSSL 832
>ref|XP_006601933.1| PREDICTED: small subunit processome component 20 homolog [Glycine
max]
Length = 2696
Score = 85.5 bits (210), Expect = 7e-15
Identities = 37/66 (56%), Positives = 50/66 (75%)
Frame = -3
Query: 200 EEYQASNFAGYFMVDTIEDISWKKRCGFLHVTEDILNSFDELHLRPFLSSLMGIVIRMLE 21
+E+QA YF +D I ++SWKK+ GFLHV EDI+ FDELH+RPFL L+G V+R+LE
Sbjct: 1073 DEFQADALLEYFTLDNIANLSWKKKYGFLHVIEDIIGVFDELHIRPFLDLLVGCVVRLLE 1132
Query: 20 SCTMTI 3
SCT ++
Sbjct: 1133 SCTSSL 1138
>ref|XP_004492742.1| PREDICTED: small subunit processome component 20 homolog [Cicer
arietinum]
Length = 2700
Score = 85.1 bits (209), Expect = 9e-15
Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Frame = -3
Query: 269 LRPISYGNKVSN--NCFELIYEGLEEEYQASNFAGYFMVDTIEDISWKKRCGFLHVTEDI 96
++P+ K N F + G E+QAS+ YF D I +SWKK+ GFLHV +DI
Sbjct: 1042 IKPLQIVKKTDEPANLFWTLPIGCTSEFQASSLLEYFTSDNIATLSWKKKYGFLHVIDDI 1101
Query: 95 LNSFDELHLRPFLSSLMGIVIRMLESCT 12
+ FDELH+RPF+ L+G V+R+LESCT
Sbjct: 1102 VGVFDELHIRPFIDLLVGCVVRVLESCT 1129
>ref|XP_002518041.1| conserved hypothetical protein [Ricinus communis]
gi|223542637|gb|EEF44174.1| conserved hypothetical
protein [Ricinus communis]
Length = 2535
Score = 83.6 bits (205), Expect = 3e-14
Identities = 45/93 (48%), Positives = 56/93 (60%)
Frame = -3
Query: 281 LIMHLRPISYGNKVSNNCFELIYEGLEEEYQASNFAGYFMVDTIEDISWKKRCGFLHVTE 102
LI L IS G + F + + E Q N YF ++ I +SWKK+ GFLHV E
Sbjct: 1010 LIKPLHIISNGANSTMGMFWSLPKNSTVELQPLNILKYFTLENIMALSWKKKYGFLHVIE 1069
Query: 101 DILNSFDELHLRPFLSSLMGIVIRMLESCTMTI 3
DIL FDE H+RPFL LMG VIRML+SCT ++
Sbjct: 1070 DILGVFDESHIRPFLDLLMGCVIRMLKSCTSSL 1102
>ref|XP_007034248.1| ARM repeat superfamily protein, putative [Theobroma cacao]
gi|508713277|gb|EOY05174.1| ARM repeat superfamily
protein, putative [Theobroma cacao]
Length = 2725
Score = 82.8 bits (203), Expect = 5e-14
Identities = 40/93 (43%), Positives = 60/93 (64%)
Frame = -3
Query: 281 LIMHLRPISYGNKVSNNCFELIYEGLEEEYQASNFAGYFMVDTIEDISWKKRCGFLHVTE 102
L+ L+ IS + ++N + + +E+ A N+ YF V+ I +SWKKR GFL+V E
Sbjct: 1045 LLKPLQIISNEDDCASNLYWNLPNSSIDEFHAPNYLKYFTVENITALSWKKRYGFLYVIE 1104
Query: 101 DILNSFDELHLRPFLSSLMGIVIRMLESCTMTI 3
D++ FDE H+RPFL LMG V+R+L SC+ +I
Sbjct: 1105 DVIGVFDEFHVRPFLDLLMGCVVRVLASCSSSI 1137
>gb|EXC21920.1| hypothetical protein L484_011085 [Morus notabilis]
Length = 2341
Score = 80.1 bits (196), Expect = 3e-13
Identities = 41/93 (44%), Positives = 58/93 (62%)
Frame = -3
Query: 281 LIMHLRPISYGNKVSNNCFELIYEGLEEEYQASNFAGYFMVDTIEDISWKKRCGFLHVTE 102
LI L+ + G +++ F + +QAS YF VD I +SWKKR GFLHV E
Sbjct: 675 LIKPLQIVPVGGDGTSDWFWTSSISSIDRFQASELLKYFSVDNITALSWKKRYGFLHVIE 734
Query: 101 DILNSFDELHLRPFLSSLMGIVIRMLESCTMTI 3
D+L FDEL +RPFL+ L+G V+R+L SC+ ++
Sbjct: 735 DVLGVFDELRIRPFLNFLVGSVVRILGSCSYSL 767
>ref|XP_007163660.1| hypothetical protein PHAVU_001G253000g, partial [Phaseolus vulgaris]
gi|561037124|gb|ESW35654.1| hypothetical protein
PHAVU_001G253000g, partial [Phaseolus vulgaris]
Length = 2722
Score = 79.7 bits (195), Expect = 4e-13
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Frame = -3
Query: 269 LRPISYGNKVSN--NCFELIYEGLEEEYQASNFAGYFMVDTIEDISWKKRCGFLHVTEDI 96
++P+ K + N F + G +E Q YF V+ I ++SWK++ GFLHV EDI
Sbjct: 1078 IKPLQIVKKTNGPANLFWTLPTGSIDEVQDGALLEYFTVENIANLSWKRKYGFLHVIEDI 1137
Query: 95 LNSFDELHLRPFLSSLMGIVIRMLESCTMTI 3
FDELH+ PFL+ L+G V+R+LESCT ++
Sbjct: 1138 FAVFDELHITPFLNLLVGCVVRLLESCTSSL 1168
>ref|XP_007216149.1| hypothetical protein PRUPE_ppa015122mg [Prunus persica]
gi|462412299|gb|EMJ17348.1| hypothetical protein
PRUPE_ppa015122mg [Prunus persica]
Length = 2641
Score = 77.8 bits (190), Expect = 1e-12
Identities = 40/93 (43%), Positives = 57/93 (61%)
Frame = -3
Query: 281 LIMHLRPISYGNKVSNNCFELIYEGLEEEYQASNFAGYFMVDTIEDISWKKRCGFLHVTE 102
LI L+ +S G+ + + F + E+QA +F YF + I +SWKKR GFLHV E
Sbjct: 1000 LIKPLQIVSMGSDSAASWFWTLPNSSLAEFQALDFLKYFTLSNISALSWKKRSGFLHVIE 1059
Query: 101 DILNSFDELHLRPFLSSLMGIVIRMLESCTMTI 3
DIL FD + PFL LMG V+R+L SC++++
Sbjct: 1060 DILGVFDASRVGPFLDFLMGCVVRILGSCSLSL 1092
>ref|XP_006489856.1| PREDICTED: small subunit processome component 20 homolog isoform X3
[Citrus sinensis]
Length = 2306
Score = 76.6 bits (187), Expect = 3e-12
Identities = 32/66 (48%), Positives = 48/66 (72%)
Frame = -3
Query: 200 EEYQASNFAGYFMVDTIEDISWKKRCGFLHVTEDILNSFDELHLRPFLSSLMGIVIRMLE 21
EE+Q +F +F ++ + +SWKK GFLHV ED++ FDELH+ PFL+ L+G V+R+L
Sbjct: 677 EEFQEYSFLKFFTIENLASLSWKKSHGFLHVIEDVIRVFDELHVGPFLNLLIGCVVRVLA 736
Query: 20 SCTMTI 3
SCT ++
Sbjct: 737 SCTSSL 742
>ref|XP_006489855.1| PREDICTED: small subunit processome component 20 homolog isoform X2
[Citrus sinensis]
Length = 2702
Score = 76.6 bits (187), Expect = 3e-12
Identities = 32/66 (48%), Positives = 48/66 (72%)
Frame = -3
Query: 200 EEYQASNFAGYFMVDTIEDISWKKRCGFLHVTEDILNSFDELHLRPFLSSLMGIVIRMLE 21
EE+Q +F +F ++ + +SWKK GFLHV ED++ FDELH+ PFL+ L+G V+R+L
Sbjct: 1073 EEFQEYSFLKFFTIENLASLSWKKSHGFLHVIEDVIRVFDELHVGPFLNLLIGCVVRVLA 1132
Query: 20 SCTMTI 3
SCT ++
Sbjct: 1133 SCTSSL 1138
>ref|XP_006489854.1| PREDICTED: small subunit processome component 20 homolog isoform X1
[Citrus sinensis]
Length = 2703
Score = 76.6 bits (187), Expect = 3e-12
Identities = 32/66 (48%), Positives = 48/66 (72%)
Frame = -3
Query: 200 EEYQASNFAGYFMVDTIEDISWKKRCGFLHVTEDILNSFDELHLRPFLSSLMGIVIRMLE 21
EE+Q +F +F ++ + +SWKK GFLHV ED++ FDELH+ PFL+ L+G V+R+L
Sbjct: 1074 EEFQEYSFLKFFTIENLASLSWKKSHGFLHVIEDVIRVFDELHVGPFLNLLIGCVVRVLA 1133
Query: 20 SCTMTI 3
SCT ++
Sbjct: 1134 SCTSSL 1139
>ref|XP_006421008.1| hypothetical protein CICLE_v10004117mg [Citrus clementina]
gi|557522881|gb|ESR34248.1| hypothetical protein
CICLE_v10004117mg [Citrus clementina]
Length = 2651
Score = 76.6 bits (187), Expect = 3e-12
Identities = 32/66 (48%), Positives = 48/66 (72%)
Frame = -3
Query: 200 EEYQASNFAGYFMVDTIEDISWKKRCGFLHVTEDILNSFDELHLRPFLSSLMGIVIRMLE 21
EE+Q +F +F ++ + +SWKK GFLHV ED++ FDELH+ PFL+ L+G V+R+L
Sbjct: 1046 EEFQEYSFLKFFTIENLASLSWKKSHGFLHVIEDVIRVFDELHVGPFLNLLIGCVVRVLA 1105
Query: 20 SCTMTI 3
SCT ++
Sbjct: 1106 SCTSSL 1111
>ref|XP_006369815.1| hypothetical protein POPTR_0001s32620g [Populus trichocarpa]
gi|550348719|gb|ERP66384.1| hypothetical protein
POPTR_0001s32620g [Populus trichocarpa]
Length = 2597
Score = 76.6 bits (187), Expect = 3e-12
Identities = 35/66 (53%), Positives = 46/66 (69%)
Frame = -3
Query: 200 EEYQASNFAGYFMVDTIEDISWKKRCGFLHVTEDILNSFDELHLRPFLSSLMGIVIRMLE 21
+E+Q SN +F ++ I +SWK+R GFLHV EDIL FDE RPFL LMG V+R+L
Sbjct: 964 DEFQTSNILKHFTMEKIMALSWKQRTGFLHVVEDILGVFDESRTRPFLDLLMGCVVRLLG 1023
Query: 20 SCTMTI 3
SCT ++
Sbjct: 1024 SCTASL 1029
>ref|XP_004305310.1| PREDICTED: small subunit processome component 20 homolog [Fragaria
vesca subsp. vesca]
Length = 2681
Score = 76.3 bits (186), Expect = 4e-12
Identities = 42/91 (46%), Positives = 53/91 (58%)
Frame = -3
Query: 281 LIMHLRPISYGNKVSNNCFELIYEGLEEEYQASNFAGYFMVDTIEDISWKKRCGFLHVTE 102
LI L IS G++ + N F G EE++ NF YF I +SWKKR FLHV E
Sbjct: 1046 LIKPLHIISIGSEGAANWFWSSSNGSVEEFRRLNFLKYFTFCNITALSWKKRSAFLHVIE 1105
Query: 101 DILNSFDELHLRPFLSSLMGIVIRMLESCTM 9
D+L FD H+ PFL LMG V+R+L S T+
Sbjct: 1106 DVLGVFDASHVGPFLDFLMGCVVRILGSSTI 1136
>ref|XP_007214892.1| hypothetical protein PRUPE_ppa000015mg [Prunus persica]
gi|462411042|gb|EMJ16091.1| hypothetical protein
PRUPE_ppa000015mg [Prunus persica]
Length = 2663
Score = 76.3 bits (186), Expect = 4e-12
Identities = 40/91 (43%), Positives = 55/91 (60%)
Frame = -3
Query: 281 LIMHLRPISYGNKVSNNCFELIYEGLEEEYQASNFAGYFMVDTIEDISWKKRCGFLHVTE 102
LI L+ +S G+ + + F + E+QA +F YF + I +SWKKR GFLHV E
Sbjct: 1008 LIKPLQIVSMGSDGAASWFWTLPNSSLAEFQALDFLKYFTLSNISALSWKKRSGFLHVIE 1067
Query: 101 DILNSFDELHLRPFLSSLMGIVIRMLESCTM 9
DIL FD + PFL LMG V+R+L SC++
Sbjct: 1068 DILGVFDASRVGPFLDFLMGCVVRILGSCSL 1098
>ref|XP_006360968.1| PREDICTED: small subunit processome component 20 homolog [Solanum
tuberosum]
Length = 1461
Score = 73.9 bits (180), Expect = 2e-11
Identities = 33/56 (58%), Positives = 42/56 (75%)
Frame = -3
Query: 170 YFMVDTIEDISWKKRCGFLHVTEDILNSFDELHLRPFLSSLMGIVIRMLESCTMTI 3
+F D I ISWKKR GFLHV EDI+ FDE+H+ PFL LMG ++R+L+SCT T+
Sbjct: 1079 HFSRDCINVISWKKRYGFLHVIEDIVAVFDEVHISPFLDLLMGCIVRLLDSCTSTL 1134
>ref|XP_004247966.1| PREDICTED: small subunit processome component 20 homolog [Solanum
lycopersicum]
Length = 2660
Score = 72.8 bits (177), Expect = 5e-11
Identities = 32/56 (57%), Positives = 41/56 (73%)
Frame = -3
Query: 170 YFMVDTIEDISWKKRCGFLHVTEDILNSFDELHLRPFLSSLMGIVIRMLESCTMTI 3
+F D I ISWKKR GFLHV EDI+ FDE+H+ PFL MG ++R+L+SCT T+
Sbjct: 1066 HFSRDCINAISWKKRYGFLHVIEDIVAVFDEVHISPFLDLFMGCIVRLLDSCTSTL 1121