BLASTX nr result
ID: Cocculus23_contig00039067
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00039067
(349 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002311376.2| hypothetical protein POPTR_0008s10210g [Popu... 74 2e-11
ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifer... 72 8e-11
emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera] 72 1e-10
ref|XP_007035861.1| Poly(A) polymerase 3, putative isoform 2 [Th... 70 2e-10
ref|XP_007035860.1| Poly(A) polymerase, putative isoform 1 [Theo... 70 2e-10
ref|XP_006488811.1| PREDICTED: poly(A) polymerase-like [Citrus s... 67 2e-09
ref|XP_006419338.1| hypothetical protein CICLE_v10004938mg [Citr... 67 2e-09
ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus commun... 65 1e-08
ref|XP_002882480.1| polynucleotide adenylyltransferase [Arabidop... 59 5e-07
>ref|XP_002311376.2| hypothetical protein POPTR_0008s10210g [Populus trichocarpa]
gi|550332775|gb|EEE88743.2| hypothetical protein
POPTR_0008s10210g [Populus trichocarpa]
Length = 495
Score = 73.9 bits (180), Expect = 2e-11
Identities = 33/71 (46%), Positives = 45/71 (63%)
Frame = -2
Query: 339 GYQGPLGKLELSTVESSQFPKNANIDSRSIESSKGYWRIYDYSQPRKAVYSHHVPNYLVG 160
GY G GK+ELS V++S+ PKNA DS + + K W++ DY+Q R YS H+P+Y VG
Sbjct: 421 GYYGIRGKMELSIVQASELPKNARFDSGNGKKMKACWKMLDYNQRRTPAYSQHLPSYFVG 480
Query: 159 YTSTNAAM*YP 127
Y +N YP
Sbjct: 481 YVESNGDTEYP 491
>ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifera]
gi|296083219|emb|CBI22855.3| unnamed protein product
[Vitis vinifera]
Length = 563
Score = 72.0 bits (175), Expect = 8e-11
Identities = 31/65 (47%), Positives = 44/65 (67%)
Frame = -2
Query: 339 GYQGPLGKLELSTVESSQFPKNANIDSRSIESSKGYWRIYDYSQPRKAVYSHHVPNYLVG 160
GYQGP GK+ LS + +SQ P A +D+ S +K WR+++Y QPR V+S H+P Y VG
Sbjct: 489 GYQGPPGKMNLSVIPTSQLPGYAQLDTGSRNRTKACWRMFNYHQPRVPVFSQHLPLYFVG 548
Query: 159 YTSTN 145
Y +T+
Sbjct: 549 YAATD 553
>emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera]
Length = 604
Score = 71.6 bits (174), Expect = 1e-10
Identities = 31/65 (47%), Positives = 44/65 (67%)
Frame = -2
Query: 339 GYQGPLGKLELSTVESSQFPKNANIDSRSIESSKGYWRIYDYSQPRKAVYSHHVPNYLVG 160
GYQGP GK+ LS + +SQ P A +D+ S +K WR+++Y QPR V+S H+P Y VG
Sbjct: 530 GYQGPPGKMNLSVIPTSQLPGYAXLDTGSRNRTKACWRMFNYHQPRVPVFSQHLPLYFVG 589
Query: 159 YTSTN 145
Y +T+
Sbjct: 590 YAATD 594
>ref|XP_007035861.1| Poly(A) polymerase 3, putative isoform 2 [Theobroma cacao]
gi|508714890|gb|EOY06787.1| Poly(A) polymerase 3,
putative isoform 2 [Theobroma cacao]
Length = 416
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/67 (47%), Positives = 47/67 (70%)
Frame = -2
Query: 345 TNGYQGPLGKLELSTVESSQFPKNANIDSRSIESSKGYWRIYDYSQPRKAVYSHHVPNYL 166
+NGYQG L ++ELS V++SQ K A D+ S + +K W++ D +Q R +YS H+P+Y+
Sbjct: 340 SNGYQGLLRRMELSIVQASQLAKYAQFDTLSRKGTKASWKMSDCNQQRIPIYSQHLPHYV 399
Query: 165 VGYTSTN 145
VGY STN
Sbjct: 400 VGYLSTN 406
>ref|XP_007035860.1| Poly(A) polymerase, putative isoform 1 [Theobroma cacao]
gi|508714889|gb|EOY06786.1| Poly(A) polymerase, putative
isoform 1 [Theobroma cacao]
Length = 555
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/67 (47%), Positives = 47/67 (70%)
Frame = -2
Query: 345 TNGYQGPLGKLELSTVESSQFPKNANIDSRSIESSKGYWRIYDYSQPRKAVYSHHVPNYL 166
+NGYQG L ++ELS V++SQ K A D+ S + +K W++ D +Q R +YS H+P+Y+
Sbjct: 415 SNGYQGLLRRMELSIVQASQLAKYAQFDTLSRKGTKASWKMSDCNQQRIPIYSQHLPHYV 474
Query: 165 VGYTSTN 145
VGY STN
Sbjct: 475 VGYLSTN 481
>ref|XP_006488811.1| PREDICTED: poly(A) polymerase-like [Citrus sinensis]
Length = 570
Score = 67.4 bits (163), Expect = 2e-09
Identities = 30/72 (41%), Positives = 44/72 (61%)
Frame = -2
Query: 342 NGYQGPLGKLELSTVESSQFPKNANIDSRSIESSKGYWRIYDYSQPRKAVYSHHVPNYLV 163
NG+QG G++ L V++SQ K++ +D S +K W+ DY+ PR VYS H+PNY++
Sbjct: 495 NGFQGSPGRMGLLVVQASQLSKSSQLDFGSGRRTKACWKNLDYNLPRIPVYSQHLPNYII 554
Query: 162 GYTSTNAAM*YP 127
GY A YP
Sbjct: 555 GYVDAKADSKYP 566
>ref|XP_006419338.1| hypothetical protein CICLE_v10004938mg [Citrus clementina]
gi|557521211|gb|ESR32578.1| hypothetical protein
CICLE_v10004938mg [Citrus clementina]
Length = 458
Score = 67.4 bits (163), Expect = 2e-09
Identities = 30/72 (41%), Positives = 44/72 (61%)
Frame = -2
Query: 342 NGYQGPLGKLELSTVESSQFPKNANIDSRSIESSKGYWRIYDYSQPRKAVYSHHVPNYLV 163
NG+QG G++ L V++SQ K++ +D S +K W+ DY+ PR VYS H+PNY++
Sbjct: 383 NGFQGSPGRMGLLVVQASQLSKSSQLDFGSGRRTKACWKNLDYNLPRIPVYSQHLPNYII 442
Query: 162 GYTSTNAAM*YP 127
GY A YP
Sbjct: 443 GYVDAKADSKYP 454
>ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus communis]
gi|223541574|gb|EEF43123.1| poly(A) polymerase, putative
[Ricinus communis]
Length = 492
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/66 (45%), Positives = 42/66 (63%)
Frame = -2
Query: 342 NGYQGPLGKLELSTVESSQFPKNANIDSRSIESSKGYWRIYDYSQPRKAVYSHHVPNYLV 163
+GY G KLELS V++++ PKNA +S + + K YW++ D Q R YS H+P Y V
Sbjct: 418 SGYHGTRRKLELSIVKAAELPKNAQFNSGNGKKMKAYWKVVDKEQ-RTPAYSQHLPGYFV 476
Query: 162 GYTSTN 145
GY +TN
Sbjct: 477 GYLATN 482
>ref|XP_002882480.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp.
lyrata] gi|297328320|gb|EFH58739.1| polynucleotide
adenylyltransferase [Arabidopsis lyrata subsp. lyrata]
Length = 507
Score = 59.3 bits (142), Expect = 5e-07
Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Frame = -2
Query: 345 TNGYQGPLGKLELSTVESSQFPKNANI--DSRSIESSKGYWRIYDYSQPRKA-VYSHHVP 175
+ +QGP+G+++LS V+ SQ PKN ++RS + +K WRI + Q VYSHH+P
Sbjct: 429 SGSFQGPVGRIQLSVVKESQLPKNGECASNNRSKKVTKTCWRIRENKQCNNVPVYSHHLP 488
Query: 174 NYLVGY 157
Y+VGY
Sbjct: 489 GYVVGY 494