BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00039056
         (614 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]          90   6e-16
ref|YP_008992013.1| polyprotein [Citrus endogenous pararetroviru...    88   2e-15
gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]          84   2e-14
ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer ar...    67   3e-09
ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer ar...    67   3e-09
ref|XP_006470136.1| PREDICTED: uncharacterized protein LOC102610...    67   4e-09

>gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1701

 Score = 89.7 bits (221), Expect = 6e-16
 Identities = 64/232 (27%), Positives = 87/232 (37%), Gaps = 35/232 (15%)
 Frame = -2

Query: 610 DLHKLMPLEWFTDYQKFQQAPQPITTTACPLLQSQADGTVKITYDXXXXXXXXXXXXXXS 431
           +L KLMPLEW ++Y++F     PI T+   + + + DGTV++T+               +
Sbjct: 265 ELIKLMPLEWISNYEQFHNNTAPIQTSES-MFERRQDGTVRMTFKPPPSAPQEPPRLSFT 323

Query: 430 YHHRLMTIQPAGGQLLHDGQPPIHSFTSTGSNVYHARVNGHFIWDVPGSGLCDSNCGCCX 251
           Y   +  +Q A   L      PI  F S G  VY A+ NGHF+WD PGSG+CD  C C  
Sbjct: 324 YSSMITAVQTAQEDL------PITGFNSEGYPVYPAKHNGHFLWDAPGSGMCDPTCPC-- 375

Query: 250 XXXXXXXXXDGNYYSCSYRXXXXXXXXXXXXXXXXXXXSQPPAHPIP------------- 110
                    + +Y     R                     PP+ P P             
Sbjct: 376 ---WDDWEEEDDYVPRRKRKPKRKKPPVSCHHYDPKPPQDPPSPPAPLPYYQKELQWIAK 432

Query: 109 ----------------------CYTISSYDKEFPPLARTTDHSTKVVTSPFV 20
                                   T S Y   FPPL R TD    VV+ PF+
Sbjct: 433 HCRSETPSPIPLPTPPLTCMMFSSTSSDYSSSFPPLERHTDSHRNVVSKPFI 484


>ref|YP_008992013.1| polyprotein [Citrus endogenous pararetrovirus]
           gi|565672276|gb|AHC13194.1| polyprotein [Citrus
           endogenous pararetrovirus]
          Length = 1812

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 45/118 (38%), Positives = 64/118 (54%)
 Frame = -2

Query: 610 DLHKLMPLEWFTDYQKFQQAPQPITTTACPLLQSQADGTVKITYDXXXXXXXXXXXXXXS 431
           +L KLMPLEW ++Y++F     P+ T+   + + + DGTV++T+               +
Sbjct: 265 ELLKLMPLEWISNYEQFHNNTAPVQTSES-MFERRPDGTVRMTFKPPPSAPQEPPRLSFT 323

Query: 430 YHHRLMTIQPAGGQLLHDGQPPIHSFTSTGSNVYHARVNGHFIWDVPGSGLCDSNCGC 257
           Y   +  +Q A   L      PI  FTS G  VY A+ NGHF+WDVPGSG CD +C C
Sbjct: 324 YSSMITAVQTAQENL------PITGFTSNGFPVYPAKQNGHFLWDVPGSGHCDPDCPC 375


>gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1799

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 60/230 (26%), Positives = 85/230 (36%), Gaps = 33/230 (14%)
 Frame = -2

Query: 610 DLHKLMPLEWFTDYQKFQQAPQPITTTACPLLQSQADGTVKITYDXXXXXXXXXXXXXXS 431
           +L +LMPLEW ++Y++F     P+ T+   + + + DGTV++T+               +
Sbjct: 265 ELLQLMPLEWISNYEQFHNNTAPVQTSES-MFERRPDGTVRMTFKPPPSAPQEPPQLSFT 323

Query: 430 YHHRLMTIQPAGGQLLHDGQPPIHSFTSTGSNVYHARVNGHFIWDVPGSGLCDSNCGCCX 251
           Y   +  +Q A   L      PI  F S G  VY A+ NGHF+WDVPGSG CD +C C  
Sbjct: 324 YSSMITAVQTAQEDL------PITGFNSDGFLVYPAKQNGHFLWDVPGSGHCDPDCPCWD 377

Query: 250 XXXXXXXXXDGNYYSCSYRXXXXXXXXXXXXXXXXXXXSQPPAHPIPCY----------- 104
                             +                     PP+ P+P Y           
Sbjct: 378 DWEEDDDYVTKK----KKKPKKKSHASCHHSTPSTPQDPPPPSAPLPLYKKELQWLAKRC 433

Query: 103 ----------------------TISSYDKEFPPLARTTDHSTKVVTSPFV 20
                                   S Y   FPPL   TD    VV+ PF+
Sbjct: 434 TPKTSLPVPDPSPPLSCMMFSSASSGYSSSFPPLDTHTDSQRNVVSKPFI 483


>ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1645

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 39/118 (33%), Positives = 60/118 (50%)
 Frame = -2

Query: 610 DLHKLMPLEWFTDYQKFQQAPQPITTTACPLLQSQADGTVKITYDXXXXXXXXXXXXXXS 431
           +L +L+PLEW T+Y+K QQ  +PI +      +S  D TVK  +                
Sbjct: 263 ELTQLIPLEWITNYEKMQQDRRPIQSQEATFRRSSVDKTVKTIFKNPDEGSSSSSQI--- 319

Query: 430 YHHRLMTIQPAGGQLLHDGQPPIHSFTSTGSNVYHARVNGHFIWDVPGSGLCDSNCGC 257
              + + IQP    +L +   PI++ T+ G  VY  +++GHFIWDV  +  CD +C C
Sbjct: 320 --FQTLMIQP----VLEEDWCPIYAVTTDGKPVYTDKIDGHFIWDVDPT-KCDPDCDC 370


>ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1951

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 39/118 (33%), Positives = 60/118 (50%)
 Frame = -2

Query: 610 DLHKLMPLEWFTDYQKFQQAPQPITTTACPLLQSQADGTVKITYDXXXXXXXXXXXXXXS 431
           +L +L+PLEW T+Y+K QQ  +PI +      +S  D TVK  +                
Sbjct: 263 ELTQLIPLEWITNYEKRQQDRRPIQSQEATFRRSSVDKTVKTIFKNPDEGSSSSSQI--- 319

Query: 430 YHHRLMTIQPAGGQLLHDGQPPIHSFTSTGSNVYHARVNGHFIWDVPGSGLCDSNCGC 257
              + + I+P    +L +   PIH+ T+ G  VY  +++GHFIWDV  +  CD +C C
Sbjct: 320 --FQTLMIEP----VLEEDWCPIHAVTTDGKPVYTDKIDGHFIWDVDPT-KCDPDCDC 370


>ref|XP_006470136.1| PREDICTED: uncharacterized protein LOC102610034 [Citrus sinensis]
          Length = 477

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 38/118 (32%), Positives = 59/118 (50%)
 Frame = -2

Query: 610 DLHKLMPLEWFTDYQKFQQAPQPITTTACPLLQSQADGTVKITYDXXXXXXXXXXXXXXS 431
           +L KLMPLEW ++Y++F Q  +PI T+     Q  +DGT+ +T+                
Sbjct: 345 ELIKLMPLEWLSNYEQFHQNSEPIQTSESHF-QKNSDGTIHLTFKPPPSS---------- 393

Query: 430 YHHRLMTIQPAGGQLLHDGQPPIHSFTSTGSNVYHARVNGHFIWDVPGSGLCDSNCGC 257
                 + +P   + L     PI +F   G  +Y  +++GHF+WDVP SG CD+   C
Sbjct: 394 ------SSEPPRTKNL-----PIQAFNDQGFPIYLVKLHGHFLWDVPASGNCDACYPC 440