BLASTX nr result

ID: Cocculus23_contig00039020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00039020
         (973 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62056.1| hypothetical protein VITISV_027967 [Vitis vinifera]   126   1e-26
ref|XP_002273553.2| PREDICTED: uncharacterized protein LOC100256...    96   2e-17
emb|CBI35396.3| unnamed protein product [Vitis vinifera]               61   8e-07

>emb|CAN62056.1| hypothetical protein VITISV_027967 [Vitis vinifera]
          Length = 346

 Score =  126 bits (317), Expect = 1e-26
 Identities = 74/176 (42%), Positives = 95/176 (53%), Gaps = 11/176 (6%)
 Frame = -3

Query: 497 LPSLISVSAETAEVPSMDFARSFMFGGNRGEIVKCELAERVNQGLAPLPGLPSQPGFVRF 318
           +PSLIS +A TAE P + F  SF  G N                   +P L S+PGFV  
Sbjct: 21  VPSLISATAATAEAPKLSFFPSFEVGEN-----------------VAVPVLQSRPGFVPL 63

Query: 317 G-------TELTPTFPGLNDLWSPHAVGNPYQYQVFPYNSVCVSARAAPNLKRKVEMFG- 162
                   +EL P F G+N LW    VG+PYQ     Y ++CV      NLKRK E  G 
Sbjct: 64  PASSRHRESELIPVFSGVNTLWGSQVVGSPYQVHGLQYGNMCVPVAPWSNLKRKAESTGD 123

Query: 161 --NPPQVESLFGCIPGGFYQDSVLRTGFVPVQAMYQNPFFPPPLRT-PLNYPLSSP 3
             N P +++ FG IPGGF +DSV   GF+P+QA++QNPF P  +R  PL+Y LS+P
Sbjct: 124 LYNRPPMDAFFGHIPGGFGRDSVFHAGFMPIQAVFQNPFMPTAVRAPPLSYNLSAP 179


>ref|XP_002273553.2| PREDICTED: uncharacterized protein LOC100256682 [Vitis vinifera]
          Length = 301

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 63/169 (37%), Positives = 81/169 (47%), Gaps = 4/169 (2%)
 Frame = -3

Query: 497 LPSLISVSAETAEVPSMDFARSFMFGGNRGEIVKCELAERVNQGLAPLPGLPSQPGFVRF 318
           +PSLIS +A TAE P + F  SF  G N                   +P L S+PGFV  
Sbjct: 21  VPSLISATAATAEAPKLSFFPSFEVGEN-----------------VAVPVLQSRPGFVPL 63

Query: 317 GTELTPTFPGLNDLWSPHAVGNPYQYQVFPYNSVCVSARAAPNLKRKVEMFG---NPPQV 147
                          S H            Y ++CV      NLKRK E  G   N P +
Sbjct: 64  PAS------------SRHRESELIPVHGLQYGNMCVPVAPWSNLKRKAESTGDLYNRPPM 111

Query: 146 ESLFGCIPGGFYQDSVLRTGFVPVQAMYQNPFFPPPLRT-PLNYPLSSP 3
           ++ FG IPGGF +DSV   GF+P+QA++QNPF P  +R  PL+Y LS+P
Sbjct: 112 DAFFGHIPGGFGRDSVFHAGFMPIQAVFQNPFMPTAVRAPPLSYNLSAP 160


>emb|CBI35396.3| unnamed protein product [Vitis vinifera]
          Length = 305

 Score = 60.8 bits (146), Expect = 8e-07
 Identities = 27/50 (54%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
 Frame = -3

Query: 149 VESLFGCIPGGFYQDSVLRTGFVPVQAMYQNPFFPPPLRT-PLNYPLSSP 3
           +++ FG IPGGF +DSV   GF+P+QA++QNPF P  +R  PL+Y LS+P
Sbjct: 1   MDAFFGHIPGGFGRDSVFHAGFMPIQAVFQNPFMPTAVRAPPLSYNLSAP 50


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