BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00038467
         (291 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16436.3| unnamed protein product [Vitis vinifera]              108   1e-21
ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containi...   108   1e-21
ref|XP_004514991.1| PREDICTED: pentatricopeptide repeat-containi...   100   3e-19
emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]    97   2e-18
ref|XP_007152410.1| hypothetical protein PHAVU_004G127800g [Phas...    93   3e-17
ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containi...    88   1e-15
ref|XP_003619639.1| Pentatricopeptide repeat-containing protein ...    87   2e-15
ref|XP_003619637.1| Pentatricopeptide repeat protein [Medicago t...    84   3e-14
ref|XP_007025291.1| Pentatricopeptide repeat (PPR-like) superfam...    64   3e-08
emb|CBI29241.3| unnamed protein product [Vitis vinifera]               63   5e-08
ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containi...    63   5e-08
emb|CAN68467.1| hypothetical protein VITISV_029899 [Vitis vinifera]    63   5e-08
ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containi...    62   1e-07
emb|CBI30729.3| unnamed protein product [Vitis vinifera]               62   1e-07
ref|XP_006438696.1| hypothetical protein CICLE_v10031011mg [Citr...    61   1e-07
ref|XP_006469734.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07
ref|XP_006447459.1| hypothetical protein CICLE_v10014715mg [Citr...    60   2e-07
emb|CBI38215.3| unnamed protein product [Vitis vinifera]               60   4e-07
ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containi...    60   4e-07
ref|XP_006283500.1| hypothetical protein CARUB_v10004552mg [Caps...    59   5e-07

>emb|CBI16436.3| unnamed protein product [Vitis vinifera]
          Length = 545

 Score =  108 bits (269), Expect = 1e-21
 Identities = 57/96 (59%), Positives = 73/96 (76%)
 Frame = +2

Query: 2   LFIYNTMIKAYSSTTTHSSSPCNSLVIFRSMLRDPGVVRNQYTLVFVVKACCCGGGLGVS 181
           +FIYNTMIKA++   T S    NS+ IF SM+R  G + N+YT VFV KAC  G GLGV 
Sbjct: 53  VFIYNTMIKAHAVIPTSSH---NSMRIFLSMVRVSGFLPNRYTFVFVFKAC--GNGLGVL 107

Query: 182 EGEQVRV*AIKLGLKCNVFVTNVLIKMYADWGLLDD 289
           EGEQ+RV AIK+GL+ N+FVTN +I+MYA+WGL+D+
Sbjct: 108 EGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDE 143


>ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 624

 Score =  108 bits (269), Expect = 1e-21
 Identities = 57/96 (59%), Positives = 73/96 (76%)
 Frame = +2

Query: 2   LFIYNTMIKAYSSTTTHSSSPCNSLVIFRSMLRDPGVVRNQYTLVFVVKACCCGGGLGVS 181
           +FIYNTMIKA++   T S    NS+ IF SM+R  G + N+YT VFV KAC  G GLGV 
Sbjct: 80  VFIYNTMIKAHAVIPTSSH---NSMRIFLSMVRVSGFLPNRYTFVFVFKAC--GNGLGVL 134

Query: 182 EGEQVRV*AIKLGLKCNVFVTNVLIKMYADWGLLDD 289
           EGEQ+RV AIK+GL+ N+FVTN +I+MYA+WGL+D+
Sbjct: 135 EGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDE 170


>ref|XP_004514991.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cicer arietinum]
          Length = 690

 Score =  100 bits (248), Expect = 3e-19
 Identities = 53/96 (55%), Positives = 67/96 (69%)
 Frame = +2

Query: 2   LFIYNTMIKAYSSTTTHSSSPCNSLVIFRSMLRDPGVVRNQYTLVFVVKACCCGGGLGVS 181
           LFIYNTMIKAYS +    +S C+S+ +FRS++RD G+  N+Y+ VF    C  G GL V 
Sbjct: 146 LFIYNTMIKAYSLSP---NSSCDSVGVFRSLIRDSGLSPNRYSFVFTFGVC--GNGLCVK 200

Query: 182 EGEQVRV*AIKLGLKCNVFVTNVLIKMYADWGLLDD 289
           EGEQVR  A+K+GL+ NVFV N LI MY  WG L+D
Sbjct: 201 EGEQVRSHAVKVGLENNVFVVNALIGMYGKWGFLED 236


>emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
          Length = 539

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 52/90 (57%), Positives = 67/90 (74%)
 Frame = +2

Query: 20  MIKAYSSTTTHSSSPCNSLVIFRSMLRDPGVVRNQYTLVFVVKACCCGGGLGVSEGEQVR 199
           MIKA++   T S    NS+ IF SM+R  G + N+YT VFV KAC  G GLGV EGEQ+R
Sbjct: 1   MIKAHAVIPTSSH---NSMRIFLSMVRVSGFLPNRYTFVFVFKAC--GNGLGVLEGEQIR 55

Query: 200 V*AIKLGLKCNVFVTNVLIKMYADWGLLDD 289
           V AIK+GL+ N+FVTN +I+MYA+WGL+D+
Sbjct: 56  VHAIKIGLESNLFVTNAMIRMYANWGLVDE 85


>ref|XP_007152410.1| hypothetical protein PHAVU_004G127800g [Phaseolus vulgaris]
           gi|561025719|gb|ESW24404.1| hypothetical protein
           PHAVU_004G127800g [Phaseolus vulgaris]
          Length = 623

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 51/96 (53%), Positives = 65/96 (67%)
 Frame = +2

Query: 2   LFIYNTMIKAYSSTTTHSSSPCNSLVIFRSMLRDPGVVRNQYTLVFVVKACCCGGGLGVS 181
           LFIYNTMIKA+S    HS    NS  +FRS+ RD  +  N+Y+ VF   AC  G GL + 
Sbjct: 79  LFIYNTMIKAHS-LLPHSCH--NSFGVFRSLTRDSDLFPNRYSFVFAFSAC--GNGLSMQ 133

Query: 182 EGEQVRV*AIKLGLKCNVFVTNVLIKMYADWGLLDD 289
           EG+QVRV A+K+GL+ NVFV N LI MY  WGL+++
Sbjct: 134 EGQQVRVHAVKVGLENNVFVLNALISMYGKWGLVEE 169


>ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
           gi|449516005|ref|XP_004165038.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 609

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 49/96 (51%), Positives = 65/96 (67%)
 Frame = +2

Query: 2   LFIYNTMIKAYSSTTTHSSSPCNSLVIFRSMLRDPGVVRNQYTLVFVVKACCCGGGLGVS 181
           LF+YNT+IK  + +TT S+   +S   FRS++R+  +V NQY+  F  K C  G G+GV 
Sbjct: 65  LFLYNTIIKVLAFSTTSSA---DSFTKFRSLIREERLVPNQYSFAFAFKGC--GSGVGVL 119

Query: 182 EGEQVRV*AIKLGLKCNVFVTNVLIKMYADWGLLDD 289
           EGEQVRV AIKLGL+ N+FVTN LI MY +   + D
Sbjct: 120 EGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVD 155


>ref|XP_003619639.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355494654|gb|AES75857.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1182

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 47/96 (48%), Positives = 63/96 (65%)
 Frame = +2

Query: 2   LFIYNTMIKAYSSTTTHSSSPCNSLVIFRSMLRDPGVVRNQYTLVFVVKACCCGGGLGVS 181
           LFIYNTMIK++S +     S  +S+ +FRS++RD G   N+Y+ VF   AC  G G+ V 
Sbjct: 241 LFIYNTMIKSHSMSP---HSYLDSIAVFRSLIRDSGYFPNRYSFVFAFGAC--GNGMCVR 295

Query: 182 EGEQVRV*AIKLGLKCNVFVTNVLIKMYADWGLLDD 289
           EGEQV   A+K+GL  NVFV N LI M+  WG ++D
Sbjct: 296 EGEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRVED 331


>ref|XP_003619637.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355494652|gb|AES75855.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 188

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 48/95 (50%), Positives = 61/95 (64%)
 Frame = +2

Query: 2   LFIYNTMIKAYSSTTTHSSSPCNSLVIFRSMLRDPGVVRNQYTLVFVVKACCCGGGLGVS 181
           LFIYNTMIKA+S +  HS    +S+ +FRS++RD     N+Y+ VF   AC  G GL V 
Sbjct: 72  LFIYNTMIKAHSMSN-HSYR--DSIAVFRSLIRDSSYFPNRYSFVFAFGAC--GNGLCVR 126

Query: 182 EGEQVRV*AIKLGLKCNVFVTNVLIKMYADWGLLD 286
           EGE V   A+K+GL  NVFV N LI M+  WG +D
Sbjct: 127 EGEHVFTHAVKVGLDGNVFVVNALIGMFGKWGHVD 161


>ref|XP_007025291.1| Pentatricopeptide repeat (PPR-like) superfamily protein, putative
           isoform 1 [Theobroma cacao]
           gi|590623325|ref|XP_007025292.1| Pentatricopeptide
           repeat (PPR-like) superfamily protein, putative isoform
           1 [Theobroma cacao] gi|590623329|ref|XP_007025293.1|
           Pentatricopeptide repeat (PPR-like) superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|590623333|ref|XP_007025294.1| Pentatricopeptide
           repeat (PPR-like) superfamily protein, putative isoform
           1 [Theobroma cacao] gi|590623336|ref|XP_007025295.1|
           Pentatricopeptide repeat (PPR-like) superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|508780657|gb|EOY27913.1| Pentatricopeptide repeat
           (PPR-like) superfamily protein, putative isoform 1
           [Theobroma cacao] gi|508780658|gb|EOY27914.1|
           Pentatricopeptide repeat (PPR-like) superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|508780659|gb|EOY27915.1| Pentatricopeptide repeat
           (PPR-like) superfamily protein, putative isoform 1
           [Theobroma cacao] gi|508780660|gb|EOY27916.1|
           Pentatricopeptide repeat (PPR-like) superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|508780661|gb|EOY27917.1| Pentatricopeptide repeat
           (PPR-like) superfamily protein, putative isoform 1
           [Theobroma cacao]
          Length = 535

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 36/91 (39%), Positives = 57/91 (62%)
 Frame = +2

Query: 5   FIYNTMIKAYSSTTTHSSSPCNSLVIFRSMLRDPGVVRNQYTLVFVVKACCCGGGLGVSE 184
           + YN++I+AY+++ T    P N+L +FR ML+ P V  ++Y+  FV+KAC   GG  V E
Sbjct: 75  YSYNSLIRAYANSHT----PQNALSLFRQMLQGP-VFPDKYSFTFVLKACAGFGG--VQE 127

Query: 185 GEQVRV*AIKLGLKCNVFVTNVLIKMYADWG 277
           G Q+    +++G+  +VFV N LI +Y   G
Sbjct: 128 GRQIHGLVLRMGIGFDVFVANTLIHVYGKGG 158


>emb|CBI29241.3| unnamed protein product [Vitis vinifera]
          Length = 514

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 36/95 (37%), Positives = 55/95 (57%)
 Frame = +2

Query: 5   FIYNTMIKAYSSTTTHSSSPCNSLVIFRSMLRDPGVVRNQYTLVFVVKACCCGGGLGVSE 184
           F YNT+I+A S     S+ PC++L++F  M+ D  V  N +T   V KAC  G    + E
Sbjct: 77  FSYNTLIRALSE----SNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKAC--GRAERLRE 130

Query: 185 GEQVRV*AIKLGLKCNVFVTNVLIKMYADWGLLDD 289
           G QV   A+K GL  + FV + +++MY   G+++D
Sbjct: 131 GRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMED 165


>ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Vitis vinifera]
          Length = 631

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 36/95 (37%), Positives = 55/95 (57%)
 Frame = +2

Query: 5   FIYNTMIKAYSSTTTHSSSPCNSLVIFRSMLRDPGVVRNQYTLVFVVKACCCGGGLGVSE 184
           F YNT+I+A S     S+ PC++L++F  M+ D  V  N +T   V KAC  G    + E
Sbjct: 77  FSYNTLIRALSE----SNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKAC--GRAERLRE 130

Query: 185 GEQVRV*AIKLGLKCNVFVTNVLIKMYADWGLLDD 289
           G QV   A+K GL  + FV + +++MY   G+++D
Sbjct: 131 GRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMED 165


>emb|CAN68467.1| hypothetical protein VITISV_029899 [Vitis vinifera]
          Length = 613

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 36/95 (37%), Positives = 55/95 (57%)
 Frame = +2

Query: 5   FIYNTMIKAYSSTTTHSSSPCNSLVIFRSMLRDPGVVRNQYTLVFVVKACCCGGGLGVSE 184
           F YNT+I+A S     S+ PC++L++F  M+ D  V  N +T   V KAC  G    + E
Sbjct: 54  FSYNTLIRALSE----SNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKAC--GRAERLRE 107

Query: 185 GEQVRV*AIKLGLKCNVFVTNVLIKMYADWGLLDD 289
           G QV   A+K GL  + FV + +++MY   G+++D
Sbjct: 108 GRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMED 142


>ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g18840-like [Vitis vinifera]
          Length = 536

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/95 (36%), Positives = 57/95 (60%)
 Frame = +2

Query: 5   FIYNTMIKAYSSTTTHSSSPCNSLVIFRSMLRDPGVVRNQYTLVFVVKACCCGGGLGVSE 184
           +++NT+I+AY+++ T    P  +L IF  ML    V+ ++YT  F +K+C  G   GV E
Sbjct: 74  YMWNTIIRAYANSPT----PEAALTIFHQMLH-ASVLPDKYTFTFALKSC--GSFSGVEE 126

Query: 185 GEQVRV*AIKLGLKCNVFVTNVLIKMYADWGLLDD 289
           G Q+    +K GL  ++F+ N LI +YA  G ++D
Sbjct: 127 GRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIED 161


>emb|CBI30729.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/95 (36%), Positives = 57/95 (60%)
 Frame = +2

Query: 5   FIYNTMIKAYSSTTTHSSSPCNSLVIFRSMLRDPGVVRNQYTLVFVVKACCCGGGLGVSE 184
           +++NT+I+AY+++ T    P  +L IF  ML    V+ ++YT  F +K+C  G   GV E
Sbjct: 74  YMWNTIIRAYANSPT----PEAALTIFHQMLH-ASVLPDKYTFTFALKSC--GSFSGVEE 126

Query: 185 GEQVRV*AIKLGLKCNVFVTNVLIKMYADWGLLDD 289
           G Q+    +K GL  ++F+ N LI +YA  G ++D
Sbjct: 127 GRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIED 161


>ref|XP_006438696.1| hypothetical protein CICLE_v10031011mg [Citrus clementina]
           gi|568859243|ref|XP_006483151.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g02980-like [Citrus sinensis]
           gi|557540892|gb|ESR51936.1| hypothetical protein
           CICLE_v10031011mg [Citrus clementina]
          Length = 598

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 31/90 (34%), Positives = 53/90 (58%)
 Frame = +2

Query: 2   LFIYNTMIKAYSSTTTHSSSPCNSLVIFRSMLRDPGVVRNQYTLVFVVKACCCGGGLGVS 181
           + ++NTM + YS     S +P  ++ +F  +L   G++ + Y+   ++KAC C G   + 
Sbjct: 87  IVLFNTMARGYS----RSKTPIRAIFLFVELLNS-GLLPDDYSFPSLLKACACVGAEALE 141

Query: 182 EGEQVRV*AIKLGLKCNVFVTNVLIKMYAD 271
           EG+Q+   AIKLGL  N++V   LI +YA+
Sbjct: 142 EGKQLHCFAIKLGLNSNLYVCTTLINLYAE 171


>ref|XP_006469734.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Citrus sinensis]
          Length = 586

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 36/91 (39%), Positives = 56/91 (61%)
 Frame = +2

Query: 5   FIYNTMIKAYSSTTTHSSSPCNSLVIFRSMLRDPGVVRNQYTLVFVVKACCCGGGLGVSE 184
           +++NTMI+ Y    T SS+P  +L  + +M R  G++ + YT  FV+KAC  G  +G+ E
Sbjct: 78  YMHNTMIRGY----TQSSNPQKALSFYVNMKRK-GLLVDNYTYPFVLKAC--GVLMGLVE 130

Query: 185 GEQVRV*AIKLGLKCNVFVTNVLIKMYADWG 277
           G ++    +K+G  C+VFV N LI MY+  G
Sbjct: 131 GTEIHGEVVKMGFLCDVFVVNGLIGMYSKCG 161


>ref|XP_006447459.1| hypothetical protein CICLE_v10014715mg [Citrus clementina]
           gi|557550070|gb|ESR60699.1| hypothetical protein
           CICLE_v10014715mg [Citrus clementina]
          Length = 586

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 36/91 (39%), Positives = 56/91 (61%)
 Frame = +2

Query: 5   FIYNTMIKAYSSTTTHSSSPCNSLVIFRSMLRDPGVVRNQYTLVFVVKACCCGGGLGVSE 184
           +++NTMI+ Y    T SS+P  +L  + +M R  G++ + YT  FV+KAC  G  +G+ E
Sbjct: 78  YMHNTMIRGY----TQSSNPQKALSFYVNMKRK-GLLVDNYTYPFVLKAC--GVLMGLVE 130

Query: 185 GEQVRV*AIKLGLKCNVFVTNVLIKMYADWG 277
           G ++    +K+G  C+VFV N LI MY+  G
Sbjct: 131 GTEIHGEVVKMGFLCDVFVVNGLIGMYSKCG 161


>emb|CBI38215.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 34/87 (39%), Positives = 54/87 (62%)
 Frame = +2

Query: 8   IYNTMIKAYSSTTTHSSSPCNSLVIFRSMLRDPGVVRNQYTLVFVVKACCCGGGLGVSEG 187
           +YN +I+  +++   S      LV+++ ML   G+V + YT+ FV+KAC       V EG
Sbjct: 106 LYNAIIRGLATSNNDS---IEGLVVYKQML-SKGIVPDNYTIPFVLKACA--ESRAVREG 159

Query: 188 EQVRV*AIKLGLKCNVFVTNVLIKMYA 268
           E+V   AIK+GL  +V+V+N L++MYA
Sbjct: 160 EEVHGQAIKMGLASDVYVSNTLMRMYA 186


>ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 617

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 34/87 (39%), Positives = 54/87 (62%)
 Frame = +2

Query: 8   IYNTMIKAYSSTTTHSSSPCNSLVIFRSMLRDPGVVRNQYTLVFVVKACCCGGGLGVSEG 187
           +YN +I+  +++   S      LV+++ ML   G+V + YT+ FV+KAC       V EG
Sbjct: 91  LYNAIIRGLATSNNDS---IEGLVVYKQML-SKGIVPDNYTIPFVLKACA--ESRAVREG 144

Query: 188 EQVRV*AIKLGLKCNVFVTNVLIKMYA 268
           E+V   AIK+GL  +V+V+N L++MYA
Sbjct: 145 EEVHGQAIKMGLASDVYVSNTLMRMYA 171


>ref|XP_006283500.1| hypothetical protein CARUB_v10004552mg [Capsella rubella]
           gi|482552205|gb|EOA16398.1| hypothetical protein
           CARUB_v10004552mg [Capsella rubella]
          Length = 537

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 36/94 (38%), Positives = 55/94 (58%)
 Frame = +2

Query: 5   FIYNTMIKAYSSTTTHSSSPCNSLVIFRSMLRDPGVVRNQYTLVFVVKACCCGGGLGVSE 184
           F +N++I+AY++    SS+P  +LV+FR ML  P V  ++Y+  FV+KAC    G    E
Sbjct: 78  FTHNSVIRAYAN----SSTPEMALVVFRDMLLGP-VFPDKYSFTFVLKACAAFSGF--EE 130

Query: 185 GEQVRV*AIKLGLKCNVFVTNVLIKMYADWGLLD 286
           G Q+    +K GL  +VFV N L+ +Y   G  +
Sbjct: 131 GRQIHGLFMKSGLMTDVFVENTLVNVYGRSGYFE 164