BLASTX nr result
ID: Cocculus23_contig00038391
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00038391
(531 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004232855.1| PREDICTED: general transcription factor IIH ... 63 4e-08
ref|XP_006347058.1| PREDICTED: general transcription factor IIH ... 63 5e-08
ref|XP_007025660.1| Transcription factor-related isoform 4 [Theo... 62 1e-07
ref|XP_007025659.1| Transcription factor-related isoform 3 [Theo... 62 1e-07
ref|XP_007025658.1| Transcription factor-related isoform 2 [Theo... 62 1e-07
ref|XP_007025657.1| Transcription factor-related isoform 1 [Theo... 62 1e-07
gb|EYU31406.1| hypothetical protein MIMGU_mgv1a006192mg [Mimulus... 61 2e-07
ref|XP_007159317.1| hypothetical protein PHAVU_002G227900g [Phas... 59 5e-07
ref|XP_006827784.1| hypothetical protein AMTR_s00009p00265760 [A... 59 5e-07
ref|XP_003635508.1| PREDICTED: general transcription factor IIH ... 59 5e-07
ref|XP_003542754.1| PREDICTED: general transcription factor IIH ... 59 5e-07
emb|CBI25914.3| unnamed protein product [Vitis vinifera] 59 5e-07
emb|CAN81292.1| hypothetical protein VITISV_005315 [Vitis vinifera] 59 5e-07
ref|XP_004505045.1| PREDICTED: general transcription factor IIH ... 59 9e-07
ref|XP_003637396.1| General transcription factor IIH subunit [Me... 59 9e-07
ref|XP_003601071.1| General transcription factor IIH subunit [Me... 59 9e-07
ref|XP_004294031.1| PREDICTED: LOW QUALITY PROTEIN: general tran... 58 2e-06
ref|XP_004167674.1| PREDICTED: RNA polymerase II transcription f... 57 4e-06
ref|XP_004134713.1| PREDICTED: general transcription factor IIH ... 57 4e-06
ref|XP_006653885.1| PREDICTED: general transcription factor IIH ... 56 6e-06
>ref|XP_004232855.1| PREDICTED: general transcription factor IIH subunit 4-like [Solanum
lycopersicum]
Length = 453
Score = 63.2 bits (152), Expect = 4e-08
Identities = 28/31 (90%), Positives = 31/31 (100%)
Frame = +1
Query: 439 GVLPREPMPSNITVRLPTLEELDAYALEQWE 531
GVLPREPMPSNITVRLP+LEEL+AYA+EQWE
Sbjct: 118 GVLPREPMPSNITVRLPSLEELEAYAVEQWE 148
>ref|XP_006347058.1| PREDICTED: general transcription factor IIH subunit 4-like [Solanum
tuberosum]
Length = 453
Score = 62.8 bits (151), Expect = 5e-08
Identities = 27/31 (87%), Positives = 31/31 (100%)
Frame = +1
Query: 439 GVLPREPMPSNITVRLPTLEELDAYALEQWE 531
G+LPREPMPSNITVRLP+LEEL+AYA+EQWE
Sbjct: 118 GILPREPMPSNITVRLPSLEELEAYAVEQWE 148
>ref|XP_007025660.1| Transcription factor-related isoform 4 [Theobroma cacao]
gi|508781026|gb|EOY28282.1| Transcription factor-related
isoform 4 [Theobroma cacao]
Length = 445
Score = 61.6 bits (148), Expect = 1e-07
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = +1
Query: 439 GVLPREPMPSNITVRLPTLEELDAYALEQWE 531
G+LPREPMPSN+TVRLPT EELDAYA EQWE
Sbjct: 117 GILPREPMPSNVTVRLPTSEELDAYAHEQWE 147
>ref|XP_007025659.1| Transcription factor-related isoform 3 [Theobroma cacao]
gi|508781025|gb|EOY28281.1| Transcription factor-related
isoform 3 [Theobroma cacao]
Length = 406
Score = 61.6 bits (148), Expect = 1e-07
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = +1
Query: 439 GVLPREPMPSNITVRLPTLEELDAYALEQWE 531
G+LPREPMPSN+TVRLPT EELDAYA EQWE
Sbjct: 78 GILPREPMPSNVTVRLPTSEELDAYAHEQWE 108
>ref|XP_007025658.1| Transcription factor-related isoform 2 [Theobroma cacao]
gi|508781024|gb|EOY28280.1| Transcription factor-related
isoform 2 [Theobroma cacao]
Length = 412
Score = 61.6 bits (148), Expect = 1e-07
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = +1
Query: 439 GVLPREPMPSNITVRLPTLEELDAYALEQWE 531
G+LPREPMPSN+TVRLPT EELDAYA EQWE
Sbjct: 78 GILPREPMPSNVTVRLPTSEELDAYAHEQWE 108
>ref|XP_007025657.1| Transcription factor-related isoform 1 [Theobroma cacao]
gi|508781023|gb|EOY28279.1| Transcription factor-related
isoform 1 [Theobroma cacao]
Length = 451
Score = 61.6 bits (148), Expect = 1e-07
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = +1
Query: 439 GVLPREPMPSNITVRLPTLEELDAYALEQWE 531
G+LPREPMPSN+TVRLPT EELDAYA EQWE
Sbjct: 117 GILPREPMPSNVTVRLPTSEELDAYAHEQWE 147
>gb|EYU31406.1| hypothetical protein MIMGU_mgv1a006192mg [Mimulus guttatus]
Length = 453
Score = 60.8 bits (146), Expect = 2e-07
Identities = 27/31 (87%), Positives = 30/31 (96%)
Frame = +1
Query: 439 GVLPREPMPSNITVRLPTLEELDAYALEQWE 531
GVLPREPM SNITVRLPTLE+LDAYA++QWE
Sbjct: 118 GVLPREPMASNITVRLPTLEDLDAYAVQQWE 148
>ref|XP_007159317.1| hypothetical protein PHAVU_002G227900g [Phaseolus vulgaris]
gi|561032732|gb|ESW31311.1| hypothetical protein
PHAVU_002G227900g [Phaseolus vulgaris]
Length = 451
Score = 59.3 bits (142), Expect = 5e-07
Identities = 27/31 (87%), Positives = 28/31 (90%)
Frame = +1
Query: 439 GVLPREPMPSNITVRLPTLEELDAYALEQWE 531
G LPRE MPSNITVRLPTLE L+AYALEQWE
Sbjct: 118 GTLPRESMPSNITVRLPTLENLEAYALEQWE 148
>ref|XP_006827784.1| hypothetical protein AMTR_s00009p00265760 [Amborella trichopoda]
gi|548832404|gb|ERM95200.1| hypothetical protein
AMTR_s00009p00265760 [Amborella trichopoda]
Length = 469
Score = 59.3 bits (142), Expect = 5e-07
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = +1
Query: 439 GVLPREPMPSNITVRLPTLEELDAYALEQWE 531
G L REPMPS++TVRLPTLEELDAYAL+QWE
Sbjct: 118 GTLSREPMPSSVTVRLPTLEELDAYALQQWE 148
>ref|XP_003635508.1| PREDICTED: general transcription factor IIH subunit 4-like, partial
[Vitis vinifera]
Length = 209
Score = 59.3 bits (142), Expect = 5e-07
Identities = 26/31 (83%), Positives = 30/31 (96%)
Frame = +1
Query: 439 GVLPREPMPSNITVRLPTLEELDAYALEQWE 531
GVLPREPMPSNITVRLP+L++L+AYAL QWE
Sbjct: 87 GVLPREPMPSNITVRLPSLDDLEAYALGQWE 117
>ref|XP_003542754.1| PREDICTED: general transcription factor IIH subunit 4-like isoform
X1 [Glycine max]
Length = 451
Score = 59.3 bits (142), Expect = 5e-07
Identities = 27/31 (87%), Positives = 28/31 (90%)
Frame = +1
Query: 439 GVLPREPMPSNITVRLPTLEELDAYALEQWE 531
G LPRE MPSNITVRLPTLE L+AYALEQWE
Sbjct: 118 GTLPRESMPSNITVRLPTLENLEAYALEQWE 148
>emb|CBI25914.3| unnamed protein product [Vitis vinifera]
Length = 225
Score = 59.3 bits (142), Expect = 5e-07
Identities = 26/31 (83%), Positives = 30/31 (96%)
Frame = +1
Query: 439 GVLPREPMPSNITVRLPTLEELDAYALEQWE 531
GVLPREPMPSNITVRLP+L++L+AYAL QWE
Sbjct: 87 GVLPREPMPSNITVRLPSLDDLEAYALGQWE 117
>emb|CAN81292.1| hypothetical protein VITISV_005315 [Vitis vinifera]
Length = 451
Score = 59.3 bits (142), Expect = 5e-07
Identities = 26/31 (83%), Positives = 30/31 (96%)
Frame = +1
Query: 439 GVLPREPMPSNITVRLPTLEELDAYALEQWE 531
GVLPREPMPSNITVRLP+L++L+AYAL QWE
Sbjct: 118 GVLPREPMPSNITVRLPSLDDLEAYALGQWE 148
>ref|XP_004505045.1| PREDICTED: general transcription factor IIH subunit 4-like [Cicer
arietinum]
Length = 451
Score = 58.5 bits (140), Expect = 9e-07
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = +1
Query: 439 GVLPREPMPSNITVRLPTLEELDAYALEQWE 531
G LPRE MPSNITVRLPTLE+L+ YALEQWE
Sbjct: 118 GTLPRESMPSNITVRLPTLEDLETYALEQWE 148
>ref|XP_003637396.1| General transcription factor IIH subunit [Medicago truncatula]
gi|355503331|gb|AES84534.1| General transcription factor
IIH subunit [Medicago truncatula]
Length = 451
Score = 58.5 bits (140), Expect = 9e-07
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = +1
Query: 439 GVLPREPMPSNITVRLPTLEELDAYALEQWE 531
G LPRE MPSNITVRLPTLE+L+ YALEQWE
Sbjct: 118 GTLPRESMPSNITVRLPTLEDLETYALEQWE 148
>ref|XP_003601071.1| General transcription factor IIH subunit [Medicago truncatula]
gi|355490119|gb|AES71322.1| General transcription factor
IIH subunit [Medicago truncatula]
Length = 452
Score = 58.5 bits (140), Expect = 9e-07
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = +1
Query: 439 GVLPREPMPSNITVRLPTLEELDAYALEQWE 531
G LPRE MPSNITVRLPTLE+L+ YALEQWE
Sbjct: 119 GTLPRESMPSNITVRLPTLEDLETYALEQWE 149
>ref|XP_004294031.1| PREDICTED: LOW QUALITY PROTEIN: general transcription factor IIH
subunit 4-like [Fragaria vesca subsp. vesca]
Length = 453
Score = 57.8 bits (138), Expect = 2e-06
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = +1
Query: 442 VLPREPMPSNITVRLPTLEELDAYALEQWE 531
VLPREPMPSN+TVRLP+ EEL+A+ALEQWE
Sbjct: 118 VLPREPMPSNVTVRLPSSEELEAFALEQWE 147
>ref|XP_004167674.1| PREDICTED: RNA polymerase II transcription factor B subunit 2-like,
partial [Cucumis sativus]
Length = 296
Score = 56.6 bits (135), Expect = 4e-06
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = +1
Query: 442 VLPREPMPSNITVRLPTLEELDAYALEQWE 531
VL REPMPSNITVRLP+LE+L+AYAL+QWE
Sbjct: 119 VLAREPMPSNITVRLPSLEDLEAYALDQWE 148
>ref|XP_004134713.1| PREDICTED: general transcription factor IIH subunit 4-like [Cucumis
sativus]
Length = 451
Score = 56.6 bits (135), Expect = 4e-06
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = +1
Query: 442 VLPREPMPSNITVRLPTLEELDAYALEQWE 531
VL REPMPSNITVRLP+LE+L+AYAL+QWE
Sbjct: 119 VLAREPMPSNITVRLPSLEDLEAYALDQWE 148
>ref|XP_006653885.1| PREDICTED: general transcription factor IIH subunit 4-like [Oryza
brachyantha]
Length = 451
Score = 55.8 bits (133), Expect = 6e-06
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = +1
Query: 439 GVLPREPMPSNITVRLPTLEELDAYALEQWE 531
G LPREP+PS++T RLPTL EL+AYALEQWE
Sbjct: 118 GSLPREPIPSSVTARLPTLAELEAYALEQWE 148