BLASTX nr result

ID: Cocculus23_contig00038364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00038364
         (305 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531110.1| conserved hypothetical protein [Ricinus comm...    91   2e-16
ref|XP_007016534.1| RING/U-box superfamily protein, putative [Th...    87   2e-15
ref|XP_006363394.1| PREDICTED: RING-H2 finger protein ATL1-like ...    85   9e-15
ref|XP_006591570.1| PREDICTED: RING-H2 finger protein ATL16-like...    79   5e-13
gb|EXC35066.1| RING-H2 finger protein ATL16 [Morus notabilis]          78   1e-12
emb|CAN80353.1| hypothetical protein VITISV_003141 [Vitis vinifera]    77   2e-12
ref|XP_006595461.1| PREDICTED: RING-H2 finger protein ATL54-like...    76   4e-12
ref|XP_006592212.1| PREDICTED: RING-H2 finger protein ATL2-like ...    76   4e-12
ref|XP_004295948.1| PREDICTED: RING-H2 finger protein ATL52-like...    76   6e-12
ref|XP_003597323.1| RING finger family protein [Medicago truncat...    76   6e-12
ref|XP_006369507.1| hypothetical protein POPTR_0001s24180g, part...    71   2e-10
ref|XP_007207783.1| hypothetical protein PRUPE_ppa026068mg, part...    66   4e-09
ref|XP_006284126.1| hypothetical protein CARUB_v10005258mg [Caps...    66   6e-09
ref|XP_004493867.1| PREDICTED: RING-H2 finger protein ATL16-like...    64   2e-08
ref|XP_004490389.1| PREDICTED: RING-H2 finger protein ATL54-like...    64   2e-08
ref|XP_004237955.1| PREDICTED: RING-H2 finger protein ATL54-like...    64   2e-08
gb|ABK24933.1| unknown [Picea sitchensis]                              64   2e-08
ref|XP_002513984.1| ring finger protein, putative [Ricinus commu...    64   3e-08
gb|EYU25976.1| hypothetical protein MIMGU_mgv1a024693mg [Mimulus...    63   4e-08
ref|XP_002310500.2| hypothetical protein POPTR_0007s03610g, part...    63   4e-08

>ref|XP_002531110.1| conserved hypothetical protein [Ricinus communis]
           gi|223529306|gb|EEF31275.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 199

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 43/89 (48%), Positives = 56/89 (62%)
 Frame = +1

Query: 1   WLRSLPNCRHYFHISCIDTWFQTHSNCPLCRSSVTHNIMVQDGYSVYRSISLETLRREDV 180
           WL+ LPNC H FH++CIDTWFQTHSNCPLCRS   H   +   YS+  +I LET RRED 
Sbjct: 104 WLKHLPNCAHVFHVACIDTWFQTHSNCPLCRS---HVYDLSHEYSMSINILLETPRREDF 160

Query: 181 IQQRTGGYQVLFESLQIQQLRRNQEMPIE 267
             + +  YQ+L   +    + R +E+  E
Sbjct: 161 FHESSEDYQILRAEILCNSMFRPEEIGAE 189


>ref|XP_007016534.1| RING/U-box superfamily protein, putative [Theobroma cacao]
           gi|508786897|gb|EOY34153.1| RING/U-box superfamily
           protein, putative [Theobroma cacao]
          Length = 210

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 43/71 (60%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
 Frame = +1

Query: 4   LRSLPNCRHYFHISCIDTWFQTHSNCPLCRSSVTH-NIMVQDGYSVYRSISLETLRREDV 180
           LR LPNC H FHISCIDTWFQ+HS+CPLCRSSV+   I  +   S+     LETLRRED 
Sbjct: 122 LRHLPNCTHAFHISCIDTWFQSHSSCPLCRSSVSELPIRPECSVSISMFTMLETLRREDF 181

Query: 181 IQQRTGGYQVL 213
            Q R   YQ+L
Sbjct: 182 SQDRAAHYQML 192


>ref|XP_006363394.1| PREDICTED: RING-H2 finger protein ATL1-like [Solanum tuberosum]
          Length = 197

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 36/65 (55%), Positives = 50/65 (76%)
 Frame = +1

Query: 1   WLRSLPNCRHYFHISCIDTWFQTHSNCPLCRSSVTHNIMVQDGYSVYRSISLETLRREDV 180
           WL+ LP C H FH++CIDTWFQ HS+CPLCRS+V  ++ +Q G+S+  +  LETLRRED 
Sbjct: 118 WLKHLPYCSHVFHVACIDTWFQIHSSCPLCRSNV-FSVKMQQGHSITMNTLLETLRREDF 176

Query: 181 IQQRT 195
            ++R+
Sbjct: 177 NRERS 181


>ref|XP_006591570.1| PREDICTED: RING-H2 finger protein ATL16-like [Glycine max]
          Length = 179

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 36/59 (61%), Positives = 43/59 (72%)
 Frame = +1

Query: 1   WLRSLPNCRHYFHISCIDTWFQTHSNCPLCRSSVTHNIMVQDGYSVYRSISLETLRRED 177
           WL+ LP+C H FH+SCIDTWFQ+HSNCPLCRS V H+I+     SV     L+ LRRED
Sbjct: 115 WLKHLPHCSHSFHVSCIDTWFQSHSNCPLCRSVVHHHIL---QCSVASHTLLQPLRRED 170


>gb|EXC35066.1| RING-H2 finger protein ATL16 [Morus notabilis]
          Length = 196

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   WLRSLPNCRHYFHISCIDTWFQTHSNCPLCRSSVTHNIMVQDGYS-VYRSISLETLRRED 177
           WLR LP+C H FHISCIDTWF  H+NCPLCR+ V  ++ ++D  S V      +TLRRED
Sbjct: 108 WLRHLPSCSHSFHISCIDTWFLNHANCPLCRTEV-QSLKLEDLESPVSHHSPPQTLRRED 166

Query: 178 VIQQRTGGYQVL 213
             ++R   Y++L
Sbjct: 167 FFRERAAHYELL 178


>emb|CAN80353.1| hypothetical protein VITISV_003141 [Vitis vinifera]
          Length = 209

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 35/63 (55%), Positives = 45/63 (71%)
 Frame = +1

Query: 1   WLRSLPNCRHYFHISCIDTWFQTHSNCPLCRSSVTHNIMVQDGYSVYRSISLETLRREDV 180
           +L+ LPNC H FHI CIDTWF++HSNCPLCRS V ++  + + +S      LETLRRED 
Sbjct: 72  FLKHLPNCSHVFHIPCIDTWFESHSNCPLCRSHV-YDFTMDNEFSGSMYTLLETLRREDF 130

Query: 181 IQQ 189
            Q+
Sbjct: 131 FQE 133


>ref|XP_006595461.1| PREDICTED: RING-H2 finger protein ATL54-like [Glycine max]
          Length = 164

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 35/69 (50%), Positives = 45/69 (65%)
 Frame = +1

Query: 1   WLRSLPNCRHYFHISCIDTWFQTHSNCPLCRSSVTHNIMVQDGYSVYRSISLETLRREDV 180
           WL+ LPNC H FH SCIDTWF++HSNCPLCR+ V+H    +   S+Y    LET R +D 
Sbjct: 84  WLKLLPNCTHGFHASCIDTWFRSHSNCPLCRAYVSHADTQECSVSLY--TLLETSRSQDF 141

Query: 181 IQQRTGGYQ 207
             + T  +Q
Sbjct: 142 STETTAYFQ 150


>ref|XP_006592212.1| PREDICTED: RING-H2 finger protein ATL2-like [Glycine max]
          Length = 118

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 34/59 (57%), Positives = 42/59 (71%)
 Frame = +1

Query: 1   WLRSLPNCRHYFHISCIDTWFQTHSNCPLCRSSVTHNIMVQDGYSVYRSISLETLRRED 177
           WL+ LP+C H FH+SCI TWFQ+HSNCPLCRS V H+I+     S+     L+ LRRED
Sbjct: 57  WLKRLPHCSHSFHVSCIGTWFQSHSNCPLCRSFVHHHIL---QCSIASHTLLQPLRRED 112


>ref|XP_004295948.1| PREDICTED: RING-H2 finger protein ATL52-like [Fragaria vesca subsp.
           vesca]
          Length = 201

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 39/73 (53%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
 Frame = +1

Query: 1   WLRSLPNCRHYFHISCIDTWFQTHSNCPLCRSSV--THNIMVQDGYSVYRSISLETLRRE 174
           WLR LP C H FHISCIDTWF  HSNCPLCRS V   H       Y++  S+      RE
Sbjct: 116 WLRHLPKCNHAFHISCIDTWFVAHSNCPLCRSEVYDFHQDCPIPMYTLLESV------RE 169

Query: 175 DVIQQRTGGYQVL 213
            VIQ+R   YQ+L
Sbjct: 170 SVIQERALHYQML 182


>ref|XP_003597323.1| RING finger family protein [Medicago truncatula]
           gi|355486371|gb|AES67574.1| RING finger family protein
           [Medicago truncatula]
          Length = 219

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 33/68 (48%), Positives = 44/68 (64%)
 Frame = +1

Query: 4   LRSLPNCRHYFHISCIDTWFQTHSNCPLCRSSVTHNIMVQDGYSVYRSISLETLRREDVI 183
           L+ LPNC H FH+SCID WFQ HS+CPLCRS V   ++  + YSV  +  LE L  +D+ 
Sbjct: 148 LKLLPNCNHGFHVSCIDKWFQLHSSCPLCRSRVYRVLVANNEYSVSLNTWLEILGMDDIT 207

Query: 184 QQRTGGYQ 207
            +R   +Q
Sbjct: 208 PERNAHFQ 215


>ref|XP_006369507.1| hypothetical protein POPTR_0001s24180g, partial [Populus
           trichocarpa] gi|550348067|gb|ERP66076.1| hypothetical
           protein POPTR_0001s24180g, partial [Populus trichocarpa]
          Length = 111

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 33/71 (46%), Positives = 41/71 (57%)
 Frame = +1

Query: 1   WLRSLPNCRHYFHISCIDTWFQTHSNCPLCRSSVTHNIMVQDGYSVYRSISLETLRREDV 180
           WL+ LPNC H FH +CIDTWFQ+H+NCPLCRS V                +L    RE++
Sbjct: 44  WLKHLPNCCHVFHTACIDTWFQSHTNCPLCRSHV---------------FNLNIPTREEL 88

Query: 181 IQQRTGGYQVL 213
            Q+R   Y VL
Sbjct: 89  SQEREANYLVL 99


>ref|XP_007207783.1| hypothetical protein PRUPE_ppa026068mg, partial [Prunus persica]
           gi|462403425|gb|EMJ08982.1| hypothetical protein
           PRUPE_ppa026068mg, partial [Prunus persica]
          Length = 118

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 25/32 (78%), Positives = 27/32 (84%)
 Frame = +1

Query: 1   WLRSLPNCRHYFHISCIDTWFQTHSNCPLCRS 96
           WL+ LP C H FHISCIDTWF +HSNCPLCRS
Sbjct: 86  WLKKLPKCSHEFHISCIDTWFVSHSNCPLCRS 117


>ref|XP_006284126.1| hypothetical protein CARUB_v10005258mg [Capsella rubella]
           gi|482552831|gb|EOA17024.1| hypothetical protein
           CARUB_v10005258mg [Capsella rubella]
          Length = 321

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 27/46 (58%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
 Frame = +1

Query: 4   LRSLPNCRHYFHISCIDTWFQTHSNCPLCRSS--VTHNIMVQDGYS 135
           LR LP CRH FH+SCIDTW ++H+NCPLCR+   V + +M+ DG S
Sbjct: 175 LRLLPKCRHAFHLSCIDTWLRSHTNCPLCRAPIVVANTMMIDDGSS 220


>ref|XP_004493867.1| PREDICTED: RING-H2 finger protein ATL16-like [Cicer arietinum]
          Length = 317

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 24/39 (61%), Positives = 31/39 (79%)
 Frame = +1

Query: 4   LRSLPNCRHYFHISCIDTWFQTHSNCPLCRSSVTHNIMV 120
           L+ LPNC HYFH+ CI+ W QT+SNCPLCR+S++ N  V
Sbjct: 117 LKVLPNCSHYFHLDCINIWLQTNSNCPLCRTSISGNTQV 155


>ref|XP_004490389.1| PREDICTED: RING-H2 finger protein ATL54-like [Cicer arietinum]
          Length = 368

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 27/58 (46%), Positives = 38/58 (65%)
 Frame = +1

Query: 4   LRSLPNCRHYFHISCIDTWFQTHSNCPLCRSSVTHNIMVQDGYSVYRSISLETLRRED 177
           LR LP C H FHISCIDTW ++H+NCPLCR+S+  N       +V   +++  L +E+
Sbjct: 162 LRLLPKCSHAFHISCIDTWLRSHTNCPLCRASIVSN-------NVTSEVTMSNLEQEN 212


>ref|XP_004237955.1| PREDICTED: RING-H2 finger protein ATL54-like [Solanum lycopersicum]
          Length = 333

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = +1

Query: 4   LRSLPNCRHYFHISCIDTWFQTHSNCPLCRSSVTHN 111
           LR LPNC+H FHI CIDTW ++H+NCPLCRS +  N
Sbjct: 168 LRLLPNCKHAFHIYCIDTWLRSHTNCPLCRSGILSN 203


>gb|ABK24933.1| unknown [Picea sitchensis]
          Length = 412

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 26/47 (55%), Positives = 31/47 (65%)
 Frame = +1

Query: 4   LRSLPNCRHYFHISCIDTWFQTHSNCPLCRSSVTHNIMVQDGYSVYR 144
           LR LP CRH FH+ C+DTW ++HS CPLCR    H +  QD   VYR
Sbjct: 145 LRLLPKCRHAFHVDCVDTWLESHSTCPLCR----HRVEAQDVLMVYR 187


>ref|XP_002513984.1| ring finger protein, putative [Ricinus communis]
           gi|223547070|gb|EEF48567.1| ring finger protein,
           putative [Ricinus communis]
          Length = 393

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 23/36 (63%), Positives = 29/36 (80%)
 Frame = +1

Query: 4   LRSLPNCRHYFHISCIDTWFQTHSNCPLCRSSVTHN 111
           LR LP C H FHISCIDTW ++H+NCPLCR+ + H+
Sbjct: 164 LRLLPKCNHAFHISCIDTWLRSHTNCPLCRAHIVHD 199


>gb|EYU25976.1| hypothetical protein MIMGU_mgv1a024693mg [Mimulus guttatus]
          Length = 354

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 23/36 (63%), Positives = 29/36 (80%)
 Frame = +1

Query: 4   LRSLPNCRHYFHISCIDTWFQTHSNCPLCRSSVTHN 111
           LR +PNCRH FHI CID W Q ++NCPLCR+S++ N
Sbjct: 146 LRIIPNCRHLFHIDCIDVWLQNNANCPLCRTSISSN 181


>ref|XP_002310500.2| hypothetical protein POPTR_0007s03610g, partial [Populus
           trichocarpa] gi|550334061|gb|EEE90950.2| hypothetical
           protein POPTR_0007s03610g, partial [Populus trichocarpa]
          Length = 311

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 14/102 (13%)
 Frame = +1

Query: 4   LRSLPNCRHYFHISCIDTWFQTHSNCPLCRSSVTHNIMV-----------QDGYSVYRSI 150
           LR LP C H FHI CIDTW ++H+NCPLCR+ +  +  +             G      +
Sbjct: 122 LRLLPKCSHAFHIPCIDTWLRSHTNCPLCRAPIVTSTAIATSSQANLDDTSSGEETRIEV 181

Query: 151 SLETLRREDVIQQRTGGYQVLFE---SLQIQQLRRNQEMPIE 267
           S E       ++ R GG +V+ E    LQ + L   +E  +E
Sbjct: 182 SEEDQESSREMEGRDGGVRVVTEEESELQSENLNEEEEEEVE 223


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