BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00038182
         (294 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    96   7e-18
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                87   2e-15
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...    87   2e-15
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    86   4e-15
emb|CAB72467.1| putative protein [Arabidopsis thaliana]                86   7e-15
emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678...    86   7e-15
gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thali...    85   1e-14
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ...    83   4e-14
dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis ...    81   2e-13
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]              80   4e-13
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]              80   4e-13
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]              80   4e-13
dbj|BAB08692.1| non-LTR retroelement reverse transcriptase-like ...    79   5e-13
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...    79   5e-13
dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]            78   1e-12
ref|XP_004169944.1| PREDICTED: putative ribonuclease H protein A...    77   2e-12
gb|AAD24652.1| putative non-LTR retroelement reverse transcripta...    77   2e-12
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...    77   2e-12
gb|AAC62779.1| F11O4.2 [Arabidopsis thaliana]                          75   1e-11
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    72   8e-11

>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 43/97 (44%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
 Frame = -2

Query: 293 EAICKPKKEDGLGIRLTKESNLAGNIKLSWWIASKKDSLWCKWIHEKYLKSESLWTL-PH 117
           + ICKPKKE GLG++  +E+N   ++KL W + S +DSLW KW     LK ES W++  H
Sbjct: 584 DEICKPKKEGGLGLQSLREANKVSSLKLIWRLLSCQDSLWVKWTRMNLLKKESFWSIGTH 643

Query: 116 ITDCSWVWRKILKHWHLIECHILHQVGNGVQTRLWLD 6
            T  SW+WR++LKH  + +     +V NGV T  W D
Sbjct: 644 STLGSWIWRRLLKHREVAKSFCKIEVNNGVNTSFWFD 680


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 41/97 (42%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
 Frame = -2

Query: 293 EAICKPKKEDGLGIRLTKESNLAGNIKLSWWIASKKDSLWCKWIHEKYLKSESLWTLPHI 114
           + +CKPK E GLG+R  KE+N    +KL W I S  +SLW KW+ E  ++ +S+W+L   
Sbjct: 510 DIVCKPKAEGGLGLRNLKEANDVSCLKLVWRIISNSNSLWTKWVAEYLIRKKSIWSLKQS 569

Query: 113 TDC-SWVWRKILKHWHLIECHILHQVGNGVQTRLWLD 6
           T   SW+WRKILK   + +     +VGNG     W D
Sbjct: 570 TSMGSWIWRKILKIRDVAKSFSRVEVGNGESASFWYD 606


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 41/95 (43%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
 Frame = -2

Query: 287 ICKPKKEDGLGIRLTKESNLAGNIKLSWWIASKKDSLWCKWIHEKYLKSESLWTL-PHIT 111
           ICKPK+E GLG+R   E+N+   +KL W + S  DSLW KW     LK ES W+L P+ +
Sbjct: 270 ICKPKQEGGLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKWSKMNLLKQESFWSLTPNSS 329

Query: 110 DCSWVWRKILKHWHLIECHILHQVGNGVQTRLWLD 6
             SW+W+K+LK+    +     +V NG +T  W D
Sbjct: 330 LGSWMWKKMLKYRETAKPFSRVEVNNGARTSFWFD 364


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 39/95 (41%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
 Frame = -2

Query: 287  ICKPKKEDGLGIRLTKESNLAGNIKLSWWIASKKDSLWCKWIHEKYLKSESLWTLPH-IT 111
            +CKPK E GLG+R  KE+N    +KL W I S  +SLW KW+ +  L++ S W +   ++
Sbjct: 865  VCKPKDEGGLGLRSLKEANDVCCLKLVWKIVSHSNSLWVKWVDQHLLRNASFWEVKQTVS 924

Query: 110  DCSWVWRKILKHWHLIECHILHQVGNGVQTRLWLD 6
              SW+W+K+LK+  + +     +VGNG QT  W D
Sbjct: 925  QGSWIWKKLLKYREVAKTLSKVEVGNGKQTSFWYD 959


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 41/95 (43%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
 Frame = -2

Query: 287 ICKPKKEDGLGIRLTKESNLAGNIKLSWWIASKKDSLWCKWIHEKYLKSESLWTLPHITD 108
           +CKPK E GLG+R  KE+N    +KL W I S  DSLW KW+    LK E  W +    +
Sbjct: 418 VCKPKSEGGLGLRSLKEANDVCCLKLVWRIISHGDSLWVKWVEHNLLKREIFWIVKENAN 477

Query: 107 C-SWVWRKILKHWHLIECHILHQVGNGVQTRLWLD 6
             SW+W+KILK+  + +     +VGNG  T  W D
Sbjct: 478 LGSWIWKKILKYRGVAKRFCKAEVGNGESTSFWFD 512


>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
           putative protein [Arabidopsis thaliana]
          Length = 473

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 42/95 (44%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
 Frame = -2

Query: 287 ICKPKKEDGLGIRLTKESNLAGNIKLSWWIASKKDSLWCKWIHEKYLKSESLWTLPHITD 108
           +CKPK+E GLG+R  KE+N    +KL W I S  DSLW KWI    LK  S W +   T 
Sbjct: 114 VCKPKEEGGLGLRSLKEANDVCCLKLIWRIISHADSLWVKWIQSSLLKKVSFWAVRENTS 173

Query: 107 C-SWVWRKILKHWHLIECHILHQVGNGVQTRLWLD 6
             SW+WRKILK   +       ++ NG +T  W D
Sbjct: 174 LGSWMWRKILKFRDIARTLCKVEINNGARTSFWYD 208


>gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thaliana]
          Length = 504

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 42/95 (44%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
 Frame = -2

Query: 287 ICKPKKEDGLGIRLTKESNLAGNIKLSWWIASKKDSLWCKWIHEKYLKSESLWTLPHITD 108
           +CKPK+E GLG+R  KE+N    +KL W I S  DSLW KWI    LK    W +   T 
Sbjct: 195 VCKPKEEGGLGLRSLKEANDVCCLKLIWRIISHADSLWVKWIQSSLLKKVFFWAVRENTS 254

Query: 107 C-SWVWRKILKHWHLIECHILHQVGNGVQTRLWLD 6
             SW+WRKILK   +       ++ NG QT  W D
Sbjct: 255 LGSWMWRKILKFRDIARTLCKVEINNGAQTSFWYD 289


>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 489

 Score = 83.2 bits (204), Expect = 4e-14
 Identities = 42/95 (44%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
 Frame = -2

Query: 287 ICKPKKEDGLGIRLTKESNLAGNIKLSWWIASKKDSLWCKWIHEKYLKSESLWTLPHITD 108
           +CKPK E GLG+R  KE+N    +KL W I S  DSLW KWIH   LK  S W +   T 
Sbjct: 247 VCKPKDEGGLGLRSLKEANDVSCLKLIWRIISHADSLWVKWIHATLLKQVSFWAVRENTS 306

Query: 107 C-SWVWRKILKHWHLIECHILHQVGNGVQTRLWLD 6
             SW+W+K+LK           +V NG  T  W D
Sbjct: 307 LGSWMWKKVLKFRDAAIQLCKAEVNNGAHTFFWYD 341


>dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1115

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 40/95 (42%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
 Frame = -2

Query: 287  ICKPKKEDGLGIRLTKESNLAGNIKLSWWIASKKDSLWCKWIHEKYLKSESLWTL-PHIT 111
            ICKPK + GLG+R   E+N+   +KL W + S  DSLW KW     LK ES W+L P+ +
Sbjct: 782  ICKPK-QGGLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKWSKMNLLKQESFWSLKPNSS 840

Query: 110  DCSWVWRKILKHWHLIECHILHQVGNGVQTRLWLD 6
              SW+W+K+LK+    +     +V NG +T  W D
Sbjct: 841  LGSWMWKKMLKYRETAKPFSRVEVNNGARTSFWFD 875


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 38/94 (40%), Positives = 54/94 (57%)
 Frame = -2

Query: 287  ICKPKKEDGLGIRLTKESNLAGNIKLSWWIASKKDSLWCKWIHEKYLKSESLWTLPHITD 108
            ICKP+ E GLG+R+ ++ N A   K++W I S  D LW K + EKY+K+     L   ++
Sbjct: 1380 ICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYVKNADFLHLQSQSN 1439

Query: 107  CSWVWRKILKHWHLIECHILHQVGNGVQTRLWLD 6
            CSW WR I+K   ++   I   VGNG +   W D
Sbjct: 1440 CSWGWRSIMKGKDVLAGAIKWNVGNGRKINFWND 1473


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 38/94 (40%), Positives = 54/94 (57%)
 Frame = -2

Query: 287  ICKPKKEDGLGIRLTKESNLAGNIKLSWWIASKKDSLWCKWIHEKYLKSESLWTLPHITD 108
            ICKP+ E GLG+R+ ++ N A   K++W I S  D LW K + EKY+K+     L   ++
Sbjct: 848  ICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYVKNADFLHLQSQSN 907

Query: 107  CSWVWRKILKHWHLIECHILHQVGNGVQTRLWLD 6
            CSW WR I+K   ++   I   VGNG +   W D
Sbjct: 908  CSWGWRSIMKGKDVLAGAIKWNVGNGRKINFWND 941


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 38/94 (40%), Positives = 54/94 (57%)
 Frame = -2

Query: 287  ICKPKKEDGLGIRLTKESNLAGNIKLSWWIASKKDSLWCKWIHEKYLKSESLWTLPHITD 108
            ICKP+ E GLG+R+ ++ N A   K++W I S  D LW K + EKY+K+     L   ++
Sbjct: 848  ICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYVKNADFLHLQSQSN 907

Query: 107  CSWVWRKILKHWHLIECHILHQVGNGVQTRLWLD 6
            CSW WR I+K   ++   I   VGNG +   W D
Sbjct: 908  CSWGWRSIMKGKDVLAGAIKWNVGNGRKINFWND 941


>dbj|BAB08692.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana] gi|93007380|gb|ABE97193.1|
           hypothetical protein At5g13655 [Arabidopsis thaliana]
          Length = 385

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 37/95 (38%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
 Frame = -2

Query: 287 ICKPKKEDGLGIRLTKESNLAGNIKLSWWIASKKDSLWCKWIHEKYLKSESLWTLPHITD 108
           +C PK E GLG+R  +E+N    +KL W I S K SLW  W+ +  L+  SLW +   + 
Sbjct: 24  VCTPKSEGGLGLRAVEETNKVCMLKLIWRILSAKGSLWVDWVKKHLLRGGSLWAVKETSS 83

Query: 107 -CSWVWRKILKHWHLIECHILHQVGNGVQTRLWLD 6
             SW+W+K+LK+    +C     V NG  T  W D
Sbjct: 84  RGSWIWKKLLKYRDKAKCFHKVDVRNGESTSFWYD 118


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|7267919|emb|CAB78261.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 662

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 35/96 (36%), Positives = 53/96 (55%)
 Frame = -2

Query: 293 EAICKPKKEDGLGIRLTKESNLAGNIKLSWWIASKKDSLWCKWIHEKYLKSESLWTLPHI 114
           E +C+PK+E GLG++  KE+N    +KL W I S+ DSLW +WI    LK  + W+    
Sbjct: 381 ETVCRPKREGGLGLQSIKEANDVCCLKLIWRIVSQGDSLWVQWIRTYLLKRNTFWSFRSA 440

Query: 113 TDCSWVWRKILKHWHLIECHILHQVGNGVQTRLWLD 6
           +  SW+W+K+LK+    +      + NG     W D
Sbjct: 441 SQGSWMWKKLLKYRDTAKAFSKVDIRNGETASFWYD 476


>dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]
          Length = 478

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 39/95 (41%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
 Frame = -2

Query: 287 ICKPKKEDGLGIRLTKESNLAGNIKLSWWIASKKDSLWCKWIHEKYLKSESLWTLPHITD 108
           +C PK E GLGIR  KE+N    +KL W + S   SLW +W+    L+  S W++   T 
Sbjct: 121 VCTPKDEGGLGIRSLKEANKVSLLKLIWRMLSST-SLWVQWLRLYLLRKGSFWSISGNTT 179

Query: 107 C-SWVWRKILKHWHLIECHILHQVGNGVQTRLWLD 6
             SW+W+KILKH  L    + H + NG  T  W D
Sbjct: 180 LGSWMWKKILKHRALASGFVKHDIHNGSNTSFWFD 214


>ref|XP_004169944.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
           sativus]
          Length = 265

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 36/96 (37%), Positives = 52/96 (54%)
 Frame = -2

Query: 293 EAICKPKKEDGLGIRLTKESNLAGNIKLSWWIASKKDSLWCKWIHEKYLKSESLWTLPHI 114
           + +C P  E GL IR     N+A  +K+ W +  K  SLW  W+    LK  SLW +   
Sbjct: 133 DEVCLPFDEGGLVIRDRSSWNIASTLKILWLLLVKSGSLWVAWVEAYILKGRSLWEIDVG 192

Query: 113 TDCSWVWRKILKHWHLIECHILHQVGNGVQTRLWLD 6
              SW +R IL+   ++E H+  +VGNG + R+WLD
Sbjct: 193 VGRSWCFRAILRKREILEAHVNIEVGNGKKCRVWLD 228


>gb|AAD24652.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 977

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
 Frame = -2

Query: 287  ICKPKKEDGLGIRLTKESNLAGNIKLSWWIASKKDSLWCKWIHEKYLKSESLWTLPHITD 108
            +CKPKKE GLG+R  KE+N    +K+ W I S  +SLW KWI +  LK+E+ W +   T 
Sbjct: 822  VCKPKKEGGLGLRSLKEANDVCCLKVVWKIVSHGNSLWVKWIEKFLLKNETFWFVKENTT 881

Query: 107  C-SWVWRKILKHWHLIECHILHQVGNGVQTRLWLD 6
              SW+WRK++K     +     +V  G  T  W D
Sbjct: 882  LGSWMWRKLIKFREKAKNFCKVEVNKGNCTSFWYD 916


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
 Frame = -2

Query: 287  ICKPKKEDGLGIRLTKESNLAGNIKLSWWIASKKDSLWCKWIHEKYLKSESLWTLPHITD 108
            +CK K+E GLG++  KE+N    +KL W I S +DSLW KW+++  ++ E+ W++   T 
Sbjct: 1012 VCKLKEEGGLGLKPLKEANEVSLLKLIWRILSARDSLWVKWVNKHLIRKETFWSVKENTG 1071

Query: 107  C-SWVWRKILKHWHLIECHILHQVGNGVQTRLWLD 6
              SW+WRKILK           +V +G  T  W D
Sbjct: 1072 LGSWLWRKILKQRDKARLFHRMEVRSGTFTSFWHD 1106


>gb|AAC62779.1| F11O4.2 [Arabidopsis thaliana]
          Length = 382

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 35/95 (36%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
 Frame = -2

Query: 287 ICKPKKEDGLGIRLTKESNLAGNIKLSWWIASKKDSLWCKWIHEKYLKSESLWTLPHITD 108
           +CKPK+E GLG+R  KE N    +KL W + S  +SLW +WI +  LK+++ W++   T+
Sbjct: 282 VCKPKQEGGLGLRPLKEINDVCCLKLIWRLVSHANSLWVQWIEKYLLKADTFWSVKATTN 341

Query: 107 -CSWVWRKILKHWHLIECHILHQVGNGVQTRLWLD 6
             SW+W K++K+  + +     +V NG +T  W +
Sbjct: 342 RGSWMWSKLIKYRDVAKEFCKVEVRNGHRTSFWYE 376


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
 Frame = -2

Query: 290  AICKPKKEDGLGIRLTKESNLAGNIKLSWWIASKKDSLWCKWIHEKYLKSESLWTLPHIT 111
            +IC+PKKE GLGI+   E+N    +KL W + S + SLW  WI    ++  + W+    +
Sbjct: 1161 SICQPKKEGGLGIKSLAEANKVSCLKLIWRLLSTQPSLWVTWIWTFIIRKGTFWSANERS 1220

Query: 110  DC-SWVWRKILKHWHLIECHILHQVGNGVQTRLWLD 6
               SW+W+K+LK+  L +     +V NG  T  W D
Sbjct: 1221 SLGSWMWKKLLKYRELAKSMHKVEVRNGSSTSFWYD 1256