BLASTX nr result
ID: Cocculus23_contig00038099
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00038099
(377 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI35273.3| unnamed protein product [Vitis vinifera] 170 2e-40
ref|XP_002269228.2| PREDICTED: pentatricopeptide repeat-containi... 165 5e-39
ref|XP_003572730.1| PREDICTED: pentatricopeptide repeat-containi... 147 1e-33
dbj|BAJ98495.1| predicted protein [Hordeum vulgare subsp. vulgare] 147 2e-33
gb|EMT22934.1| hypothetical protein F775_14642 [Aegilops tauschii] 145 7e-33
ref|NP_001047477.2| Os02g0625100 [Oryza sativa Japonica Group] g... 144 1e-32
gb|EAY86757.1| hypothetical protein OsI_08137 [Oryza sativa Indi... 144 1e-32
ref|XP_006648851.1| PREDICTED: pentatricopeptide repeat-containi... 144 2e-32
ref|XP_004953150.1| PREDICTED: pentatricopeptide repeat-containi... 139 5e-31
ref|NP_001168246.1| uncharacterized protein LOC100382009 [Zea ma... 134 1e-29
emb|CBI24015.3| unnamed protein product [Vitis vinifera] 128 7e-28
ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containi... 128 7e-28
ref|XP_007028899.1| Pentatricopeptide repeat superfamily protein... 124 1e-26
gb|ADE77588.1| unknown [Picea sitchensis] 124 1e-26
ref|XP_004494285.1| PREDICTED: pentatricopeptide repeat-containi... 124 2e-26
ref|XP_004306162.1| PREDICTED: putative pentatricopeptide repeat... 123 2e-26
emb|CBI39605.3| unnamed protein product [Vitis vinifera] 123 2e-26
ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containi... 123 2e-26
emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera] 123 2e-26
ref|XP_006857535.1| hypothetical protein AMTR_s00061p00035580 [A... 123 3e-26
>emb|CBI35273.3| unnamed protein product [Vitis vinifera]
Length = 405
Score = 170 bits (430), Expect = 2e-40
Identities = 81/100 (81%), Positives = 89/100 (89%)
Frame = +3
Query: 3 DLLGRAGLVKEALDFVEKMPVKPHPGLWGALVNACRIHGNVKLGEELGKHLVELEPHHSG 182
DLLGRAGLVKEALDFVEKMP+KPH LWGALV ACRIHG V+LGEELGK L++LEPHH G
Sbjct: 305 DLLGRAGLVKEALDFVEKMPMKPHSELWGALVGACRIHGQVELGEELGKRLIDLEPHHGG 364
Query: 183 RYSLLSNIFAAAKRWDDVTTVRNLVKDRKVLKNPGNSIVK 302
RY+LL NIFAAA+RWDDV VR+L K RKVLKNPGNSIV+
Sbjct: 365 RYALLCNIFAAAQRWDDVAMVRDLEKGRKVLKNPGNSIVE 404
>ref|XP_002269228.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 550
Score = 165 bits (418), Expect = 5e-39
Identities = 78/97 (80%), Positives = 86/97 (88%)
Frame = +3
Query: 3 DLLGRAGLVKEALDFVEKMPVKPHPGLWGALVNACRIHGNVKLGEELGKHLVELEPHHSG 182
DLLGRAGLVKEALDFVEKMP+KPH LWGALV ACRIHG V+LGEELGK L++LEPHH G
Sbjct: 419 DLLGRAGLVKEALDFVEKMPMKPHSELWGALVGACRIHGQVELGEELGKRLIDLEPHHGG 478
Query: 183 RYSLLSNIFAAAKRWDDVTTVRNLVKDRKVLKNPGNS 293
RY+LL NIFAAA+RWDDV VR+L K RKVLKNPGN+
Sbjct: 479 RYALLCNIFAAAQRWDDVAMVRDLEKGRKVLKNPGNN 515
>ref|XP_003572730.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Brachypodium distachyon]
Length = 497
Score = 147 bits (372), Expect = 1e-33
Identities = 66/99 (66%), Positives = 80/99 (80%)
Frame = +3
Query: 3 DLLGRAGLVKEALDFVEKMPVKPHPGLWGALVNACRIHGNVKLGEELGKHLVELEPHHSG 182
DLLGRAGLVKEA+DFV+ MPV+PHPGLWGAL AC IHG V+LGEE+ K L+ELEP H
Sbjct: 387 DLLGRAGLVKEAVDFVKNMPVEPHPGLWGALAGACNIHGEVELGEEIAKKLIELEPRHGS 446
Query: 183 RYSLLSNIFAAAKRWDDVTTVRNLVKDRKVLKNPGNSIV 299
RY LLSNI+ + RW+D+ TVR L+K+RKV K GN++V
Sbjct: 447 RYILLSNIYGTSSRWEDMATVRRLIKERKVSKGTGNAVV 485
>dbj|BAJ98495.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 491
Score = 147 bits (370), Expect = 2e-33
Identities = 67/99 (67%), Positives = 80/99 (80%)
Frame = +3
Query: 3 DLLGRAGLVKEALDFVEKMPVKPHPGLWGALVNACRIHGNVKLGEELGKHLVELEPHHSG 182
DLLGRAG V+EA+DFV MPV+PHPGLWGAL AC+IHG V+LGEE+ K L+ELEP H
Sbjct: 381 DLLGRAGHVREAVDFVNSMPVEPHPGLWGALAGACKIHGEVELGEEIAKKLIELEPRHGS 440
Query: 183 RYSLLSNIFAAAKRWDDVTTVRNLVKDRKVLKNPGNSIV 299
RY LLSNI+ A+ RWDD+ TVR L+KDRKV K GN++V
Sbjct: 441 RYILLSNIYGASNRWDDMATVRRLLKDRKVPKGTGNAMV 479
>gb|EMT22934.1| hypothetical protein F775_14642 [Aegilops tauschii]
Length = 491
Score = 145 bits (365), Expect = 7e-33
Identities = 65/99 (65%), Positives = 80/99 (80%)
Frame = +3
Query: 3 DLLGRAGLVKEALDFVEKMPVKPHPGLWGALVNACRIHGNVKLGEELGKHLVELEPHHSG 182
DLLGRAG V+EA+DFV MPV+PHPGLWGAL AC+IHG V+LGEE+ K L+ELEP H
Sbjct: 381 DLLGRAGHVREAVDFVNSMPVEPHPGLWGALAGACKIHGEVELGEEIAKKLIELEPRHGS 440
Query: 183 RYSLLSNIFAAAKRWDDVTTVRNLVKDRKVLKNPGNSIV 299
RY LLSNI+ A+ RWDD+ TVR L+K+RK+ K GN++V
Sbjct: 441 RYILLSNIYGASNRWDDMATVRRLLKERKIPKGTGNAMV 479
>ref|NP_001047477.2| Os02g0625100 [Oryza sativa Japonica Group]
gi|125582938|gb|EAZ23869.1| hypothetical protein
OsJ_07586 [Oryza sativa Japonica Group]
gi|255671102|dbj|BAF09391.2| Os02g0625100 [Oryza sativa
Japonica Group]
Length = 493
Score = 144 bits (363), Expect = 1e-32
Identities = 65/99 (65%), Positives = 80/99 (80%)
Frame = +3
Query: 3 DLLGRAGLVKEALDFVEKMPVKPHPGLWGALVNACRIHGNVKLGEELGKHLVELEPHHSG 182
DLLGR+G V+EA+DFV+ MPV+PHPGLWGAL AC+IHG V+LGEE+ K L+ELEP H
Sbjct: 382 DLLGRSGHVREAVDFVKSMPVEPHPGLWGALAGACKIHGEVELGEEVAKKLIELEPQHGS 441
Query: 183 RYSLLSNIFAAAKRWDDVTTVRNLVKDRKVLKNPGNSIV 299
RY LLSNI+A + RWDD+ VR ++KDRKV K GN+IV
Sbjct: 442 RYILLSNIYATSNRWDDMANVRRILKDRKVPKGTGNAIV 480
>gb|EAY86757.1| hypothetical protein OsI_08137 [Oryza sativa Indica Group]
Length = 493
Score = 144 bits (363), Expect = 1e-32
Identities = 65/99 (65%), Positives = 80/99 (80%)
Frame = +3
Query: 3 DLLGRAGLVKEALDFVEKMPVKPHPGLWGALVNACRIHGNVKLGEELGKHLVELEPHHSG 182
DLLGR+G V+EA+DFV+ MPV+PHPGLWGAL AC+IHG V+LGEE+ K L+ELEP H
Sbjct: 382 DLLGRSGHVREAVDFVKSMPVEPHPGLWGALAGACKIHGEVELGEEVAKKLIELEPQHGS 441
Query: 183 RYSLLSNIFAAAKRWDDVTTVRNLVKDRKVLKNPGNSIV 299
RY LLSNI+A + RWDD+ VR ++KDRKV K GN+IV
Sbjct: 442 RYILLSNIYATSNRWDDMANVRRILKDRKVPKGTGNAIV 480
>ref|XP_006648851.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Oryza brachyantha]
Length = 497
Score = 144 bits (362), Expect = 2e-32
Identities = 69/112 (61%), Positives = 85/112 (75%), Gaps = 2/112 (1%)
Frame = +3
Query: 3 DLLGRAGLVKEALDFVEKMPVKPHPGLWGALVNACRIHGNVKLGEELGKHLVELEPHHSG 182
DLLGR+G V+EA+DFV+ MPV PHPGLWGAL AC+IHG V+LGEE+ K L+ELEP H
Sbjct: 386 DLLGRSGHVREAVDFVKNMPVVPHPGLWGALAGACKIHGEVELGEEIAKKLIELEPRHGS 445
Query: 183 RYSLLSNIFAAAKRWDDVTTVRNLVKDRKVLKNPGNSIV--KI*SPEQKSHS 332
RY LLSNI+A + RWDD+ VR ++KDRKV K GN+IV S E ++HS
Sbjct: 446 RYILLSNIYATSNRWDDMADVRRILKDRKVPKGTGNAIVGNDSQSSEHETHS 497
>ref|XP_004953150.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Setaria italica]
Length = 494
Score = 139 bits (349), Expect = 5e-31
Identities = 62/99 (62%), Positives = 80/99 (80%)
Frame = +3
Query: 3 DLLGRAGLVKEALDFVEKMPVKPHPGLWGALVNACRIHGNVKLGEELGKHLVELEPHHSG 182
DLLGR+G V+EA+ FV+ MPV+PHPGLWGAL +AC++HG V+LGEE+ K L+ELEP H
Sbjct: 388 DLLGRSGRVREAVYFVKSMPVEPHPGLWGALASACKMHGEVELGEEVAKKLIELEPRHGS 447
Query: 183 RYSLLSNIFAAAKRWDDVTTVRNLVKDRKVLKNPGNSIV 299
RY LLSN++ +A RWDD+ TVR L+K RKV K GN++V
Sbjct: 448 RYILLSNLYGSANRWDDMATVRELLKRRKVPKGTGNTVV 486
>ref|NP_001168246.1| uncharacterized protein LOC100382009 [Zea mays]
gi|223946981|gb|ACN27574.1| unknown [Zea mays]
gi|413932359|gb|AFW66910.1| hypothetical protein
ZEAMMB73_426189 [Zea mays]
Length = 499
Score = 134 bits (337), Expect = 1e-29
Identities = 59/99 (59%), Positives = 78/99 (78%)
Frame = +3
Query: 3 DLLGRAGLVKEALDFVEKMPVKPHPGLWGALVNACRIHGNVKLGEELGKHLVELEPHHSG 182
DL+GR+G V EAL FV+ MPV+PHPGLWGAL +AC++HG V+LGEE+ K L+ELEP H
Sbjct: 390 DLIGRSGRVMEALYFVKSMPVEPHPGLWGALASACKMHGKVELGEEVAKKLIELEPRHGS 449
Query: 183 RYSLLSNIFAAAKRWDDVTTVRNLVKDRKVLKNPGNSIV 299
RY LLSN++ + RWDD+ +VR ++K RKV K GN++V
Sbjct: 450 RYILLSNLYGSVNRWDDMASVRKILKRRKVPKGTGNAVV 488
>emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 128 bits (322), Expect = 7e-28
Identities = 59/100 (59%), Positives = 79/100 (79%)
Frame = +3
Query: 3 DLLGRAGLVKEALDFVEKMPVKPHPGLWGALVNACRIHGNVKLGEELGKHLVELEPHHSG 182
DLLGRAGL++EA + +MPV P G+ GALV ACRIHGN +LGE++GK ++ELEPH+SG
Sbjct: 342 DLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSG 401
Query: 183 RYSLLSNIFAAAKRWDDVTTVRNLVKDRKVLKNPGNSIVK 302
RY LL+N++A+A RW+DV VR L+ DR V K PG S+++
Sbjct: 402 RYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIE 441
>ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 128 bits (322), Expect = 7e-28
Identities = 59/100 (59%), Positives = 79/100 (79%)
Frame = +3
Query: 3 DLLGRAGLVKEALDFVEKMPVKPHPGLWGALVNACRIHGNVKLGEELGKHLVELEPHHSG 182
DLLGRAGL++EA + +MPV P G+ GALV ACRIHGN +LGE++GK ++ELEPH+SG
Sbjct: 397 DLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSG 456
Query: 183 RYSLLSNIFAAAKRWDDVTTVRNLVKDRKVLKNPGNSIVK 302
RY LL+N++A+A RW+DV VR L+ DR V K PG S+++
Sbjct: 457 RYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIE 496
>ref|XP_007028899.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
gi|508717504|gb|EOY09401.1| Pentatricopeptide repeat
superfamily protein [Theobroma cacao]
Length = 718
Score = 124 bits (312), Expect = 1e-26
Identities = 55/113 (48%), Positives = 86/113 (76%)
Frame = +3
Query: 3 DLLGRAGLVKEALDFVEKMPVKPHPGLWGALVNACRIHGNVKLGEELGKHLVELEPHHSG 182
DLLGRAG V+EA +F++KMP +P LWG+L+ ACR+H N+ +GE +G+ L+E+EP ++G
Sbjct: 359 DLLGRAGRVEEAFEFIKKMPFEPTAALWGSLLGACRVHSNIDIGEFVGRRLLEIEPENAG 418
Query: 183 RYSLLSNIFAAAKRWDDVTTVRNLVKDRKVLKNPGNSIVKI*SPEQKSHSFNS 341
Y +LSN+FA+A RW+DV VR+L+ ++ V K+PG S +++ +Q HSF++
Sbjct: 419 NYVILSNLFASAGRWEDVRMVRDLMMEKAVKKDPGRSWIEL---DQTLHSFHA 468
>gb|ADE77588.1| unknown [Picea sitchensis]
Length = 312
Score = 124 bits (312), Expect = 1e-26
Identities = 61/122 (50%), Positives = 88/122 (72%)
Frame = +3
Query: 3 DLLGRAGLVKEALDFVEKMPVKPHPGLWGALVNACRIHGNVKLGEELGKHLVELEPHHSG 182
DLLGRAG + EA DF+EKMP++P +WGA + +CRIH N++LGE + + L+ L+P ++G
Sbjct: 85 DLLGRAGHLNEAWDFIEKMPIEPGASVWGAFLGSCRIHCNIELGERVAELLLNLDPDNAG 144
Query: 183 RYSLLSNIFAAAKRWDDVTTVRNLVKDRKVLKNPGNSIVKI*SPEQKSHSFNSLGPLSPP 362
Y LLSNI+AAA RWDDV VR ++K++ V K+PG S++++ K HSF +G +S P
Sbjct: 145 YYVLLSNIYAAAGRWDDVAKVRKMMKEKDVKKSPGCSLIEV---NNKLHSF-VVGDISHP 200
Query: 363 *T 368
T
Sbjct: 201 QT 202
>ref|XP_004494285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Cicer arietinum]
Length = 618
Score = 124 bits (310), Expect = 2e-26
Identities = 58/111 (52%), Positives = 82/111 (73%)
Frame = +3
Query: 3 DLLGRAGLVKEALDFVEKMPVKPHPGLWGALVNACRIHGNVKLGEELGKHLVELEPHHSG 182
DLLGRAG ++EA F+ +MPVKP+ +WGAL+ ACRIH NV++GE +GK L++++P HSG
Sbjct: 391 DLLGRAGKLEEAEKFIHEMPVKPNAPIWGALLGACRIHRNVEVGERVGKILIQMKPEHSG 450
Query: 183 RYSLLSNIFAAAKRWDDVTTVRNLVKDRKVLKNPGNSIVKI*SPEQKSHSF 335
Y LLSNI+A +W DVT +R L+K++ V K PG S+++I + K H F
Sbjct: 451 YYVLLSNIYARTNKWKDVTVMRRLMKEKGVRKPPGYSLIEI---DGKVHEF 498
>ref|XP_004306162.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 637
Score = 123 bits (309), Expect = 2e-26
Identities = 54/113 (47%), Positives = 86/113 (76%)
Frame = +3
Query: 3 DLLGRAGLVKEALDFVEKMPVKPHPGLWGALVNACRIHGNVKLGEELGKHLVELEPHHSG 182
DLLGR+G V+EA +F++KMP +P +WG+L+ ACR+H NVK+GE +G L+++EP ++G
Sbjct: 410 DLLGRSGRVEEAFEFIKKMPSEPTAAIWGSLLGACRVHSNVKIGEFVGFQLLDIEPENAG 469
Query: 183 RYSLLSNIFAAAKRWDDVTTVRNLVKDRKVLKNPGNSIVKI*SPEQKSHSFNS 341
Y +LSN+FA+A RW+DV TVR L+ ++ V+K PG S +++ +Q H+F++
Sbjct: 470 NYVILSNLFASAGRWEDVRTVRELMTEKAVIKEPGRSWIEL---DQVLHTFHA 519
>emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 123 bits (309), Expect = 2e-26
Identities = 58/101 (57%), Positives = 76/101 (75%)
Frame = +3
Query: 3 DLLGRAGLVKEALDFVEKMPVKPHPGLWGALVNACRIHGNVKLGEELGKHLVELEPHHSG 182
DLLGRAGL+ EA V +P +P P +WGAL+ ACR HGNV+LGE +GK L+ELEP +SG
Sbjct: 396 DLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSG 455
Query: 183 RYSLLSNIFAAAKRWDDVTTVRNLVKDRKVLKNPGNSIVKI 305
RY+LLSNI+A A RW++V VR L+K+R + PG SI+ +
Sbjct: 456 RYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDL 496
>ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 123 bits (309), Expect = 2e-26
Identities = 58/101 (57%), Positives = 76/101 (75%)
Frame = +3
Query: 3 DLLGRAGLVKEALDFVEKMPVKPHPGLWGALVNACRIHGNVKLGEELGKHLVELEPHHSG 182
DLLGRAGL+ EA V +P +P P +WGAL+ ACR HGNV+LGE +GK L+ELEP +SG
Sbjct: 444 DLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSG 503
Query: 183 RYSLLSNIFAAAKRWDDVTTVRNLVKDRKVLKNPGNSIVKI 305
RY+LLSNI+A A RW++V VR L+K+R + PG SI+ +
Sbjct: 504 RYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDL 544
>emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 123 bits (309), Expect = 2e-26
Identities = 58/101 (57%), Positives = 76/101 (75%)
Frame = +3
Query: 3 DLLGRAGLVKEALDFVEKMPVKPHPGLWGALVNACRIHGNVKLGEELGKHLVELEPHHSG 182
DLLGRAGL+ EA V +P +P P +WGAL+ ACR HGNV+LGE +GK L+ELEP +SG
Sbjct: 445 DLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSG 504
Query: 183 RYSLLSNIFAAAKRWDDVTTVRNLVKDRKVLKNPGNSIVKI 305
RY+LLSNI+A A RW++V VR L+K+R + PG SI+ +
Sbjct: 505 RYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDL 545
>ref|XP_006857535.1| hypothetical protein AMTR_s00061p00035580 [Amborella trichopoda]
gi|548861631|gb|ERN19002.1| hypothetical protein
AMTR_s00061p00035580 [Amborella trichopoda]
Length = 629
Score = 123 bits (308), Expect = 3e-26
Identities = 59/100 (59%), Positives = 73/100 (73%)
Frame = +3
Query: 3 DLLGRAGLVKEALDFVEKMPVKPHPGLWGALVNACRIHGNVKLGEELGKHLVELEPHHSG 182
DLLGRAG ++EA + ++ MP+KPH G+WGAL+ ACRIHGN L E KHL E+EP G
Sbjct: 407 DLLGRAGRLEEAHELLKTMPIKPHAGVWGALLGACRIHGNANLAEVAAKHLFEVEPDGIG 466
Query: 183 RYSLLSNIFAAAKRWDDVTTVRNLVKDRKVLKNPGNSIVK 302
Y LLSNI+AAAKRWDDV VR ++ R + KNPG S V+
Sbjct: 467 NYVLLSNIYAAAKRWDDVRRVRKEMRGRGLRKNPGCSWVE 506