BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00037396
         (563 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containi...   104   1e-20
ref|XP_006340527.1| PREDICTED: pentatricopeptide repeat-containi...    99   8e-19
gb|EXC11892.1| hypothetical protein L484_005353 [Morus notabilis]      96   5e-18
ref|XP_004309232.1| PREDICTED: pentatricopeptide repeat-containi...    94   2e-17
ref|XP_006494379.1| PREDICTED: putative pentatricopeptide repeat...    93   5e-17
ref|XP_002510857.1| pentatricopeptide repeat-containing protein,...    92   7e-17
ref|XP_006421829.1| hypothetical protein CICLE_v10004587mg [Citr...    91   2e-16
ref|XP_004240796.1| PREDICTED: pentatricopeptide repeat-containi...    91   2e-16
ref|XP_007038564.1| Pentatricopeptide repeat-containing protein,...    91   3e-16
ref|XP_004140857.1| PREDICTED: pentatricopeptide repeat-containi...    87   3e-15
ref|XP_007221067.1| hypothetical protein PRUPE_ppa016304mg [Prun...    84   3e-14
ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [S...    77   4e-12
tpg|DAA57121.1| TPA: putative NAC domain and pentatricopeptide r...    75   2e-11
gb|EPS71383.1| hypothetical protein M569_03376, partial [Genlise...    74   3e-11
gb|EYU19509.1| hypothetical protein MIMGU_mgv1a026940mg, partial...    71   2e-10
gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japo...    70   5e-10
ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group] g...    70   5e-10
ref|XP_004166750.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    69   8e-10
ref|XP_006646428.1| PREDICTED: pentatricopeptide repeat-containi...    66   5e-09
gb|EMT31807.1| hypothetical protein F775_12997 [Aegilops tauschii]     64   4e-08

>ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Vitis vinifera]
          Length = 650

 Score =  104 bits (260), Expect = 1e-20
 Identities = 54/103 (52%), Positives = 72/103 (69%)
 Frame = -2

Query: 313 PISRLFTSTSATPPAHQISEKNPKAVESVRELHAHLMRNGRHADSFSMSDVLRSYALNPL 134
           P +RLFTS+S  P + ++S KN  + ++ +ELHAHL+R   H D F MSDV+RSY+L+  
Sbjct: 6   PNTRLFTSSSMAPKSGRVS-KNSISTDTSKELHAHLIRTQLHTDPFLMSDVIRSYSLSST 64

Query: 133 NLNKACVVFDQIERPTTFIWNWMIRALSHSDRPSEAAWAYDQM 5
           NL+KA +VF+QIE PT  +WN MIR LS SD P EA   Y +M
Sbjct: 65  NLHKAHLVFNQIECPTLVVWNHMIRGLSQSDHPVEAIHMYTRM 107


>ref|XP_006340527.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Solanum tuberosum]
          Length = 595

 Score = 99.0 bits (245), Expect = 8e-19
 Identities = 51/102 (50%), Positives = 69/102 (67%)
 Frame = -2

Query: 310 ISRLFTSTSATPPAHQISEKNPKAVESVRELHAHLMRNGRHADSFSMSDVLRSYALNPLN 131
           +SR F+STS+         K+  ++ S +ELHAHL+R  +H+D F +SDV+R Y+L P +
Sbjct: 3   LSRPFSSTSSPLQKAAPYLKSSNSIASAKELHAHLIRTQKHSDPFVISDVIRFYSLFPTS 62

Query: 130 LNKACVVFDQIERPTTFIWNWMIRALSHSDRPSEAAWAYDQM 5
           L+KA V F+Q ERPT  IWN+MIR LS S RP EA   YD+M
Sbjct: 63  LHKALVAFNQTERPTLPIWNYMIRGLSKSHRPIEALHMYDRM 104


>gb|EXC11892.1| hypothetical protein L484_005353 [Morus notabilis]
          Length = 617

 Score = 96.3 bits (238), Expect = 5e-18
 Identities = 53/108 (49%), Positives = 70/108 (64%), Gaps = 4/108 (3%)
 Frame = -2

Query: 316 KPISRLFTSTSAT----PPAHQISEKNPKAVESVRELHAHLMRNGRHADSFSMSDVLRSY 149
           +P+ R FTS SA     PPA +   + P    S++ELHA L+R+  H D FS+S ++R+Y
Sbjct: 5   RPVRR-FTSKSAAATQQPPARKT--QTPTPTNSIKELHARLIRSHLHTDPFSISQIIRAY 61

Query: 148 ALNPLNLNKACVVFDQIERPTTFIWNWMIRALSHSDRPSEAAWAYDQM 5
           AL+P NL+KA   FDQIE PT  +WN MIR LS SD P+EA   Y +M
Sbjct: 62  ALSPPNLSKARFAFDQIEGPTLPLWNHMIRGLSQSDHPNEAIVFYSRM 109


>ref|XP_004309232.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 601

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 53/104 (50%), Positives = 67/104 (64%)
 Frame = -2

Query: 316 KPISRLFTSTSATPPAHQISEKNPKAVESVRELHAHLMRNGRHADSFSMSDVLRSYALNP 137
           KPI R   ST+A PP   I+      + S +ELHAHL+R   H D  S+SDVLR Y  +P
Sbjct: 5   KPIWR-HLSTTAAPPKPPIT-----TLASTKELHAHLIRTHLHKDPSSISDVLRFYTQSP 58

Query: 136 LNLNKACVVFDQIERPTTFIWNWMIRALSHSDRPSEAAWAYDQM 5
            +LNKA  VF+QIE+PT  +WN MIR LS S++PSEA   Y +M
Sbjct: 59  PHLNKAHFVFNQIEQPTLMVWNLMIRGLSQSEKPSEAIRMYSRM 102


>ref|XP_006494379.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Citrus sinensis]
          Length = 600

 Score = 92.8 bits (229), Expect = 5e-17
 Identities = 47/105 (44%), Positives = 75/105 (71%)
 Frame = -2

Query: 316 KPISRLFTSTSATPPAHQISEKNPKAVESVRELHAHLMRNGRHADSFSMSDVLRSYALNP 137
           + I+R  T++S T    ++S K P ++ S++ELHA+L+R   H D  S+S+V++SYAL+P
Sbjct: 5   RSITRHLTTSSTTQKPKRVSTK-PISLNSIKELHANLIRTHLHTDPSSISNVIKSYALSP 63

Query: 136 LNLNKACVVFDQIERPTTFIWNWMIRALSHSDRPSEAAWAYDQMW 2
             L+KA +VF+Q+ERPT  ++N MI+ LS SD+P+EA   Y+ M+
Sbjct: 64  SYLDKAHLVFNQLERPTLLVFNHMIQGLSQSDQPNEAIDMYNNMY 108


>ref|XP_002510857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549972|gb|EEF51459.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 641

 Score = 92.4 bits (228), Expect = 7e-17
 Identities = 49/104 (47%), Positives = 71/104 (68%)
 Frame = -2

Query: 316 KPISRLFTSTSATPPAHQISEKNPKAVESVRELHAHLMRNGRHADSFSMSDVLRSYALNP 137
           +PISRLFTS+S T    QI  K+  +++S++E HAHL+R   H +  SMS+V++SYAL+ 
Sbjct: 45  RPISRLFTSSSTTRKCQQII-KSGFSIKSIKEQHAHLIRTHHHKNPKSMSNVIKSYALSR 103

Query: 136 LNLNKACVVFDQIERPTTFIWNWMIRALSHSDRPSEAAWAYDQM 5
            +LNKA   F QI +PT  I+N++IR LS S+ P+EA   Y  +
Sbjct: 104 SHLNKANFAFIQIGQPTLLIFNYLIRGLSQSENPNEAIVMYSDL 147


>ref|XP_006421829.1| hypothetical protein CICLE_v10004587mg [Citrus clementina]
           gi|557523702|gb|ESR35069.1| hypothetical protein
           CICLE_v10004587mg [Citrus clementina]
          Length = 600

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 46/105 (43%), Positives = 74/105 (70%)
 Frame = -2

Query: 316 KPISRLFTSTSATPPAHQISEKNPKAVESVRELHAHLMRNGRHADSFSMSDVLRSYALNP 137
           + I+R  T++S T    ++S K P ++ S++ELHA+L+R   H D  S+S+V++SYAL+P
Sbjct: 5   RSITRHLTTSSTTQKPKRVSTK-PISLNSIKELHANLIRTHLHTDPSSISNVIKSYALSP 63

Query: 136 LNLNKACVVFDQIERPTTFIWNWMIRALSHSDRPSEAAWAYDQMW 2
             L+KA +VF+Q+ERPT  ++N MI+  S SD+P+EA   Y+ M+
Sbjct: 64  SYLDKAHLVFNQLERPTLLVFNHMIQGFSQSDQPNEAIDMYNNMY 108


>ref|XP_004240796.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Solanum lycopersicum]
          Length = 597

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 48/102 (47%), Positives = 67/102 (65%)
 Frame = -2

Query: 310 ISRLFTSTSATPPAHQISEKNPKAVESVRELHAHLMRNGRHADSFSMSDVLRSYALNPLN 131
           +SR F+STS           +  ++ S +ELHAHL+R  +++D F++S V+R Y+L P +
Sbjct: 3   LSRPFSSTSFPLQKAAPYLNSSNSIASAKELHAHLIRTQKYSDPFAISHVIRLYSLFPTS 62

Query: 130 LNKACVVFDQIERPTTFIWNWMIRALSHSDRPSEAAWAYDQM 5
           L+KA V F+Q ERPT  IWN+MIR LS SDRP EA   Y +M
Sbjct: 63  LHKALVAFNQTERPTLPIWNYMIRGLSKSDRPIEALHMYVRM 104


>ref|XP_007038564.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
           cacao] gi|508775809|gb|EOY23065.1| Pentatricopeptide
           repeat-containing protein, putative [Theobroma cacao]
          Length = 616

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 50/103 (48%), Positives = 68/103 (66%)
 Frame = -2

Query: 310 ISRLFTSTSATPPAHQISEKNPKAVESVRELHAHLMRNGRHADSFSMSDVLRSYALNPLN 131
           ISR FT  S TP   +   KNP ++ + +ELHAHL+R  RH D FS+S V+R+Y+L P +
Sbjct: 7   ISRRFTCFS-TPLKPERVTKNPLSINAAKELHAHLIRTQRHEDPFSISPVIRAYSLAPSH 65

Query: 130 LNKACVVFDQIERPTTFIWNWMIRALSHSDRPSEAAWAYDQMW 2
           L+KA  VF Q + PT F +N MIR  S S+ P+EA   Y+QM+
Sbjct: 66  LHKAHHVFYQTKEPTMFNFNHMIRGFSQSNVPNEAIKMYNQMY 108


>ref|XP_004140857.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 593

 Score = 87.0 bits (214), Expect = 3e-15
 Identities = 45/103 (43%), Positives = 65/103 (63%)
 Frame = -2

Query: 310 ISRLFTSTSATPPAHQISEKNPKAVESVRELHAHLMRNGRHADSFSMSDVLRSYALNPLN 131
           I R F    +T    Q +  N  ++ S++ELHA L+R   H D  S+S+V++ YAL+P +
Sbjct: 3   IPRSFCRLFSTFSKSQRAISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSPQS 62

Query: 130 LNKACVVFDQIERPTTFIWNWMIRALSHSDRPSEAAWAYDQMW 2
           L KA  VF+QI+RPT  +WN MI  LS SDRP++A   Y+ M+
Sbjct: 63  LPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMY 105


>ref|XP_007221067.1| hypothetical protein PRUPE_ppa016304mg [Prunus persica]
           gi|462417529|gb|EMJ22266.1| hypothetical protein
           PRUPE_ppa016304mg [Prunus persica]
          Length = 640

 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 42/82 (51%), Positives = 58/82 (70%)
 Frame = -2

Query: 247 PKAVESVRELHAHLMRNGRHADSFSMSDVLRSYALNPLNLNKACVVFDQIERPTTFIWNW 68
           P ++  ++ELHAHL+R     D  S+S+V+R YAL+PL L KA +VF+QIE+PT  IWN 
Sbjct: 67  PISLTQIKELHAHLIRTQLDKDPSSVSEVVRYYALSPLFLEKALLVFNQIEQPTLLIWNH 126

Query: 67  MIRALSHSDRPSEAAWAYDQMW 2
           MIR LS S + SEA   Y++M+
Sbjct: 127 MIRGLSQSGQFSEAIHVYNRMY 148


>ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
           gi|241930650|gb|EES03795.1| hypothetical protein
           SORBIDRAFT_03g037910 [Sorghum bicolor]
          Length = 894

 Score = 76.6 bits (187), Expect = 4e-12
 Identities = 37/75 (49%), Positives = 53/75 (70%)
 Frame = -2

Query: 238 VESVRELHAHLMRNGRHADSFSMSDVLRSYALNPLNLNKACVVFDQIERPTTFIWNWMIR 59
           +E+V++LHAHL+ +G H   ++MS V+RSYAL   +L  A  VF+QIE PTTF+WN ++R
Sbjct: 324 MEAVKKLHAHLVVSGLHNCQYAMSKVIRSYALQQSDLVFAHKVFEQIESPTTFLWNTLLR 383

Query: 58  ALSHSDRPSEAAWAY 14
            L+ SD P +A   Y
Sbjct: 384 GLAQSDAPKDAIVFY 398


>tpg|DAA57121.1| TPA: putative NAC domain and pentatricopeptide repeat containing
            protein [Zea mays]
          Length = 1467

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 36/75 (48%), Positives = 52/75 (69%)
 Frame = -2

Query: 238  VESVRELHAHLMRNGRHADSFSMSDVLRSYALNPLNLNKACVVFDQIERPTTFIWNWMIR 59
            +E+V++LHAHL+ +G H   ++MS V+R YAL+  +L  A  VF QIE PTTF+WN ++R
Sbjct: 854  MEAVKKLHAHLVVSGLHNCQYAMSKVIRLYALHQSDLVSAHKVFKQIESPTTFLWNTLLR 913

Query: 58   ALSHSDRPSEAAWAY 14
             L+ SD P +A   Y
Sbjct: 914  GLAQSDAPKDAIVFY 928


>gb|EPS71383.1| hypothetical protein M569_03376, partial [Genlisea aurea]
          Length = 566

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 35/76 (46%), Positives = 50/76 (65%)
 Frame = -2

Query: 232 SVRELHAHLMRNGRHADSFSMSDVLRSYALNPLNLNKACVVFDQIERPTTFIWNWMIRAL 53
           +VRELH H +R  RH +  +MS V+ SYA +P +++KA   F +IE PT  + N MIR L
Sbjct: 1   TVRELHGHFIRTNRHKNPNAMSQVIESYARSPPSIDKARFAFSEIEAPTLALCNHMIRGL 60

Query: 52  SHSDRPSEAAWAYDQM 5
           S SD P++A   +D+M
Sbjct: 61  SRSDTPADALHVFDKM 76


>gb|EYU19509.1| hypothetical protein MIMGU_mgv1a026940mg, partial [Mimulus
           guttatus]
          Length = 601

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 40/103 (38%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
 Frame = -2

Query: 310 ISRLFTSTSATPPAHQISE-KNPKAVESVRELHAHLMRNGRHADSFSMSDVLRSYALNPL 134
           ++R FT+TS        SE + P   + + ELH HL+R  +H +   MS V++SYAL+  
Sbjct: 3   LARRFTTTSKAAKPDPFSEFRIPH--DPIGELHGHLIRTNQHRNPIPMSQVIKSYALSQT 60

Query: 133 NLNKACVVFDQIERPTTFIWNWMIRALSHSDRPSEAAWAYDQM 5
           ++NKA   F  ++ PT  I+N MIR L  SD P +A   +D+M
Sbjct: 61  SMNKARSAFFAVDNPTLPIFNHMIRGLCQSDSPVDALVLFDKM 103


>gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japonica Group]
          Length = 1031

 Score = 69.7 bits (169), Expect = 5e-10
 Identities = 35/75 (46%), Positives = 52/75 (69%)
 Frame = -2

Query: 238 VESVRELHAHLMRNGRHADSFSMSDVLRSYALNPLNLNKACVVFDQIERPTTFIWNWMIR 59
           +E+++ LHA+ + +G +   ++MS VLRSYA+   +L  A  VFDQIE PTTF+WN +IR
Sbjct: 466 MEAIKRLHAYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAPTTFLWNILIR 525

Query: 58  ALSHSDRPSEAAWAY 14
            L+ SD P++A   Y
Sbjct: 526 GLAQSDAPADAIAFY 540


>ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group]
           gi|56785064|dbj|BAD82703.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|255673814|dbj|BAF06530.2| Os01g0815900 [Oryza
           sativa Japonica Group]
          Length = 566

 Score = 69.7 bits (169), Expect = 5e-10
 Identities = 35/75 (46%), Positives = 52/75 (69%)
 Frame = -2

Query: 238 VESVRELHAHLMRNGRHADSFSMSDVLRSYALNPLNLNKACVVFDQIERPTTFIWNWMIR 59
           +E+++ LHA+ + +G +   ++MS VLRSYA+   +L  A  VFDQIE PTTF+WN +IR
Sbjct: 1   MEAIKRLHAYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAPTTFLWNILIR 60

Query: 58  ALSHSDRPSEAAWAY 14
            L+ SD P++A   Y
Sbjct: 61  GLAQSDAPADAIAFY 75


>ref|XP_004166750.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g22410, mitochondrial-like [Cucumis sativus]
          Length = 552

 Score = 68.9 bits (167), Expect = 8e-10
 Identities = 32/63 (50%), Positives = 45/63 (71%)
 Frame = -2

Query: 190 HADSFSMSDVLRSYALNPLNLNKACVVFDQIERPTTFIWNWMIRALSHSDRPSEAAWAYD 11
           H D  S+S+V++ YAL+P +L KA  VF+QI+RPT  +WN MI  LS SDRP++A   Y+
Sbjct: 2   HIDPSSISEVIKHYALSPQSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYN 61

Query: 10  QMW 2
            M+
Sbjct: 62  TMY 64


>ref|XP_006646428.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Oryza brachyantha]
          Length = 1035

 Score = 66.2 bits (160), Expect = 5e-09
 Identities = 34/75 (45%), Positives = 51/75 (68%)
 Frame = -2

Query: 238 VESVRELHAHLMRNGRHADSFSMSDVLRSYALNPLNLNKACVVFDQIERPTTFIWNWMIR 59
           +E++++LHAH + +G +   ++MS VLR YA+   +L  A  VFDQIE PTTF WN +IR
Sbjct: 470 MEAIKKLHAHCIVSGLYNCHYAMSKVLRFYAILQPDLVIAHKVFDQIEGPTTFYWNIIIR 529

Query: 58  ALSHSDRPSEAAWAY 14
            L+ S+ P++A   Y
Sbjct: 530 GLAQSNAPADAIAFY 544


>gb|EMT31807.1| hypothetical protein F775_12997 [Aegilops tauschii]
          Length = 1042

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 33/93 (35%), Positives = 55/93 (59%)
 Frame = -2

Query: 292 STSATPPAHQISEKNPKAVESVRELHAHLMRNGRHADSFSMSDVLRSYALNPLNLNKACV 113
           +T   P    + E +   +E++++LH HL+ +G H   ++MS +LR YA+   +L  A  
Sbjct: 460 NTVKVPGLALVGESHIVMMETIKKLHGHLIVSGLHNCQYAMSKILRFYAILQPDLVLAHK 519

Query: 112 VFDQIERPTTFIWNWMIRALSHSDRPSEAAWAY 14
           V+ QIE PTT++ N ++R L+ SD P +A   Y
Sbjct: 520 VYGQIEAPTTYLRNIILRGLAQSDAPEDAIAFY 552