BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00037204
         (900 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267684.1| PREDICTED: pentatricopeptide repeat-containi...   376   e-102
emb|CAN60667.1| hypothetical protein VITISV_028261 [Vitis vinifera]   375   e-101
ref|XP_006442285.1| hypothetical protein CICLE_v10020422mg [Citr...   365   2e-98
ref|XP_006477941.1| PREDICTED: pentatricopeptide repeat-containi...   361   2e-97
ref|XP_006849944.1| hypothetical protein AMTR_s00022p00130870 [A...   357   3e-96
gb|EXC11739.1| hypothetical protein L484_020794 [Morus notabilis]     346   8e-93
ref|XP_004146072.1| PREDICTED: pentatricopeptide repeat-containi...   343   4e-92
ref|XP_002882884.1| predicted protein [Arabidopsis lyrata subsp....   341   3e-91
ref|XP_007022117.1| Pentatricopeptide repeat (PPR) superfamily p...   339   1e-90
ref|XP_006407066.1| hypothetical protein EUTSA_v10020856mg [Eutr...   338   2e-90
ref|XP_004248491.1| PREDICTED: pentatricopeptide repeat-containi...   337   3e-90
ref|XP_006299283.1| hypothetical protein CARUB_v10015437mg [Caps...   336   6e-90
ref|NP_188076.1| pentatricopeptide repeat-containing protein [Ar...   336   8e-90
ref|XP_006360029.1| PREDICTED: pentatricopeptide repeat-containi...   332   9e-89
emb|CCI55338.1| PH01B019A14.7 [Phyllostachys edulis]                  329   1e-87
ref|XP_002521673.1| pentatricopeptide repeat-containing protein,...   329   1e-87
ref|XP_004976824.1| PREDICTED: pentatricopeptide repeat-containi...   328   2e-87
gb|EMT16192.1| hypothetical protein F775_07734 [Aegilops tauschii]    325   1e-86
ref|XP_002447107.1| hypothetical protein SORBIDRAFT_06g028710 [S...   325   1e-86
dbj|BAK08007.1| predicted protein [Hordeum vulgare subsp. vulgare]    323   6e-86

>ref|XP_002267684.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Vitis vinifera]
          Length = 393

 Score =  376 bits (966), Expect = e-102
 Identities = 184/292 (63%), Positives = 228/292 (78%)
 Frame = +3

Query: 24  IIHVILTDRRMVSRFNSTISSFDPLKRLNHKDWLAPNEVLKIFKCLRDPGSVLNAFDTIS 203
           +IH  L  +   S F ST    D LKRL+HKDWL+P EVLKIF  LR+P SV+   D++S
Sbjct: 21  LIHPTLIQK---STFFSTFPP-DDLKRLDHKDWLSPREVLKIFDGLRNPESVMPVLDSVS 76

Query: 204 QRNDYKPNEALYTLIIQKLSHAKKFDAIQDILGRIKTERGFRVSDEFFYNVIKIYGNVAG 383
           +R D+KPNEALYTL+I KL+ A+ FDAI+D++  +K ++  R+SD FFYNVIK+YGNVAG
Sbjct: 77  KRKDFKPNEALYTLVINKLAQARMFDAIEDVIKTLKIDKQCRLSDVFFYNVIKVYGNVAG 136

Query: 384 RIDKAVEALFTMPEYHCWPTVKTFNFVLNMLVSAKQFDVIHEVYLGAPQLGVEIDTCCLN 563
           + D+AVE LF MP++HCWP+VKTFN VLNMLVSAK+FDV+H+VY GAP+LGVEID CCLN
Sbjct: 137 QPDRAVETLFDMPKFHCWPSVKTFNLVLNMLVSAKRFDVVHKVYAGAPELGVEIDACCLN 196

Query: 564 ILIKGLCECDKLDAAFQLLDELPKQGLKPNVRTYSTIMHFLCERGGVEEAFELYERMERA 743
           IL+KGLC    +DAA +LLDE PKQ  +PNVRT+ST+MH LCE G VE A  L ERMER 
Sbjct: 197 ILVKGLCRSGNVDAACELLDEYPKQRCRPNVRTFSTLMHGLCESGRVEGALGLLERMERE 256

Query: 744 ACDPDTIIFNTLISGLCKQGRVTDGMKLFDRMGLKGCCPNSGSYQAILYGLL 899
              PDT++FN LISGL K+GRV +GM+L  RM LKGC PN+GSYQ +LYG+L
Sbjct: 257 GVYPDTVVFNILISGLRKRGRVEEGMELLGRMKLKGCYPNAGSYQEVLYGVL 308



 Score = 81.3 bits (199), Expect = 5e-13
 Identities = 56/222 (25%), Positives = 104/222 (46%)
 Frame = +3

Query: 222 PNEALYTLIIQKLSHAKKFDAIQDILGRIKTERGFRVSDEFFYNVIKIYGNVAGRIDKAV 401
           P+   + L++  L  AK+FD +  +      E G  + D    N++      +G +D A 
Sbjct: 155 PSVKTFNLVLNMLVSAKRFDVVHKVYAGAP-ELGVEI-DACCLNILVKGLCRSGNVDAAC 212

Query: 402 EALFTMPEYHCWPTVKTFNFVLNMLVSAKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGL 581
           E L   P+  C P V+TF+ +++ L  + + +    +     + GV  DT   NILI GL
Sbjct: 213 ELLDEYPKQRCRPNVRTFSTLMHGLCESGRVEGALGLLERMEREGVYPDTVVFNILISGL 272

Query: 582 CECDKLDAAFQLLDELPKQGLKPNVRTYSTIMHFLCERGGVEEAFELYERMERAACDPDT 761
            +  +++   +LL  +  +G  PN  +Y  +++ + + G   +A E   +M      P  
Sbjct: 273 RKRGRVEEGMELLGRMKLKGCYPNAGSYQEVLYGVLDTGRFGKAKEFMCQMIDEGVSPSF 332

Query: 762 IIFNTLISGLCKQGRVTDGMKLFDRMGLKGCCPNSGSYQAIL 887
           + +  +I GLCK+  V D + +  +M  +G  P    ++ IL
Sbjct: 333 VSYKMMIYGLCKENLVADVVWILKQMVEQGFVPERWMWRRIL 374


>emb|CAN60667.1| hypothetical protein VITISV_028261 [Vitis vinifera]
          Length = 393

 Score =  375 bits (963), Expect = e-101
 Identities = 184/292 (63%), Positives = 227/292 (77%)
 Frame = +3

Query: 24  IIHVILTDRRMVSRFNSTISSFDPLKRLNHKDWLAPNEVLKIFKCLRDPGSVLNAFDTIS 203
           +IH  L  +   S F ST    D LKRL+HKDWL+P EVLKIF  LR+P SV+   D++ 
Sbjct: 21  LIHPTLIQK---SIFFSTFPP-DDLKRLDHKDWLSPREVLKIFDGLRNPESVMPVLDSVC 76

Query: 204 QRNDYKPNEALYTLIIQKLSHAKKFDAIQDILGRIKTERGFRVSDEFFYNVIKIYGNVAG 383
           +R D+KPNEALYTL+I KL+ A+ FDAI+D++  +K ++  R+SD FFYNVIK+YGNVAG
Sbjct: 77  KRKDFKPNEALYTLVINKLAQARMFDAIEDVIKTLKIDKQCRLSDVFFYNVIKVYGNVAG 136

Query: 384 RIDKAVEALFTMPEYHCWPTVKTFNFVLNMLVSAKQFDVIHEVYLGAPQLGVEIDTCCLN 563
           R D+AVE LF MP++HCWP+VKTFN VLNMLVSAK+FDV+H+VY GAP+LGVEID CCLN
Sbjct: 137 RPDRAVETLFDMPKFHCWPSVKTFNLVLNMLVSAKRFDVVHKVYAGAPELGVEIDACCLN 196

Query: 564 ILIKGLCECDKLDAAFQLLDELPKQGLKPNVRTYSTIMHFLCERGGVEEAFELYERMERA 743
           IL+KGLC    +DAA +LLDE PKQ  +PNVRT+ST+MH LCE G VE A  L ERMER 
Sbjct: 197 ILVKGLCRSGNVDAACELLDEYPKQRCRPNVRTFSTLMHGLCESGRVEGALGLLERMERE 256

Query: 744 ACDPDTIIFNTLISGLCKQGRVTDGMKLFDRMGLKGCCPNSGSYQAILYGLL 899
              PDT++FN LISGL K+GRV +GM+L  RM LKGC PN+GSYQ +LYG+L
Sbjct: 257 GVYPDTVVFNILISGLRKRGRVEEGMELLGRMKLKGCYPNAGSYQEVLYGVL 308



 Score = 80.9 bits (198), Expect = 6e-13
 Identities = 56/222 (25%), Positives = 104/222 (46%)
 Frame = +3

Query: 222 PNEALYTLIIQKLSHAKKFDAIQDILGRIKTERGFRVSDEFFYNVIKIYGNVAGRIDKAV 401
           P+   + L++  L  AK+FD +  +      E G  + D    N++      +G +D A 
Sbjct: 155 PSVKTFNLVLNMLVSAKRFDVVHKVYAGAP-ELGVEI-DACCLNILVKGLCRSGNVDAAC 212

Query: 402 EALFTMPEYHCWPTVKTFNFVLNMLVSAKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGL 581
           E L   P+  C P V+TF+ +++ L  + + +    +     + GV  DT   NILI GL
Sbjct: 213 ELLDEYPKQRCRPNVRTFSTLMHGLCESGRVEGALGLLERMEREGVYPDTVVFNILISGL 272

Query: 582 CECDKLDAAFQLLDELPKQGLKPNVRTYSTIMHFLCERGGVEEAFELYERMERAACDPDT 761
            +  +++   +LL  +  +G  PN  +Y  +++ + + G   +A E   +M      P  
Sbjct: 273 RKRGRVEEGMELLGRMKLKGCYPNAGSYQEVLYGVLDTGRFGKAKEFMCQMIDEGVSPSF 332

Query: 762 IIFNTLISGLCKQGRVTDGMKLFDRMGLKGCCPNSGSYQAIL 887
           + +  +I GLCK+  V D + +  +M  +G  P    ++ IL
Sbjct: 333 VSYKMVIYGLCKENLVADVVWILKQMVEQGFVPERWMWRRIL 374


>ref|XP_006442285.1| hypothetical protein CICLE_v10020422mg [Citrus clementina]
           gi|557544547|gb|ESR55525.1| hypothetical protein
           CICLE_v10020422mg [Citrus clementina]
          Length = 404

 Score =  365 bits (936), Expect = 2e-98
 Identities = 179/266 (67%), Positives = 208/266 (78%)
 Frame = +3

Query: 102 RLNHKDWLAPNEVLKIFKCLRDPGSVLNAFDTISQRNDYKPNEALYTLIIQKLSHAKKFD 281
           +LNHKDWL+P EVLKIF  LRDP SV++  +  S+R DY PNEALYTLII KL+ AK+FD
Sbjct: 49  KLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKRFD 108

Query: 282 AIQDILGRIKTERGFRVSDEFFYNVIKIYGNVAGRIDKAVEALFTMPEYHCWPTVKTFNF 461
           AI+DI+ RIK E+  R SD FFYNVIKIYGN+AGRI KA+E LF MP Y+CWP+VKTFN 
Sbjct: 109 AIEDIMQRIKVEKLCRFSDGFFYNVIKIYGNMAGRISKAIETLFDMPSYNCWPSVKTFNL 168

Query: 462 VLNMLVSAKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFQLLDELPKQG 641
           VLN+LVSAK F  I  +Y  A +LGVEID CCLNIL+KGLCE   L+AAF +LDE PKQ 
Sbjct: 169 VLNLLVSAKLFGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN 228

Query: 642 LKPNVRTYSTIMHFLCERGGVEEAFELYERMERAACDPDTIIFNTLISGLCKQGRVTDGM 821
            +PNVRTYST+MH LCE+G VEEAF L ERME    D DT+ FN LISGL KQG+V +GM
Sbjct: 229 CEPNVRTYSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288

Query: 822 KLFDRMGLKGCCPNSGSYQAILYGLL 899
           KL +RM  KGC PNS SYQ +LYGLL
Sbjct: 289 KLLERMKGKGCYPNSASYQEVLYGLL 314


>ref|XP_006477941.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Citrus sinensis]
          Length = 404

 Score =  361 bits (927), Expect = 2e-97
 Identities = 177/266 (66%), Positives = 207/266 (77%)
 Frame = +3

Query: 102 RLNHKDWLAPNEVLKIFKCLRDPGSVLNAFDTISQRNDYKPNEALYTLIIQKLSHAKKFD 281
           +LNHKDWL+P EVLKIF  LRDP SV++  +  S+R DY PNEALYTLII KL+ AK FD
Sbjct: 49  KLNHKDWLSPTEVLKIFSNLRDPISVISVLNQYSKRKDYNPNEALYTLIINKLAQAKSFD 108

Query: 282 AIQDILGRIKTERGFRVSDEFFYNVIKIYGNVAGRIDKAVEALFTMPEYHCWPTVKTFNF 461
           AI+DI+ RIK E+  R SD FFYNVIKIYGN+AGRI KA+E LF MP Y+CWP+VKTFN 
Sbjct: 109 AIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNL 168

Query: 462 VLNMLVSAKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFQLLDELPKQG 641
           VLN+LVSAK +  I  +Y  A +LGVEID CCLNIL+KGLCE   L+AAF +LDE PKQ 
Sbjct: 169 VLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQN 228

Query: 642 LKPNVRTYSTIMHFLCERGGVEEAFELYERMERAACDPDTIIFNTLISGLCKQGRVTDGM 821
            +PNVRT+ST+MH LCE+G VEEAF L ERME    D DT+ FN LISGL KQG+V +GM
Sbjct: 229 CEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQGKVEEGM 288

Query: 822 KLFDRMGLKGCCPNSGSYQAILYGLL 899
           KL +RM  KGC PNS SYQ +LYGLL
Sbjct: 289 KLLERMKGKGCYPNSASYQEVLYGLL 314


>ref|XP_006849944.1| hypothetical protein AMTR_s00022p00130870 [Amborella trichopoda]
           gi|548853542|gb|ERN11525.1| hypothetical protein
           AMTR_s00022p00130870 [Amborella trichopoda]
          Length = 404

 Score =  357 bits (917), Expect = 3e-96
 Identities = 169/267 (63%), Positives = 207/267 (77%)
 Frame = +3

Query: 99  KRLNHKDWLAPNEVLKIFKCLRDPGSVLNAFDTISQRNDYKPNEALYTLIIQKLSHAKKF 278
           KRL+HKDWLAPNEVLKIFK +RDP    + F  + +R DYKPNEALYT++I+ L+ AKKF
Sbjct: 56  KRLDHKDWLAPNEVLKIFKSVRDPQMAFDLFQKLVRRKDYKPNEALYTILIEMLASAKKF 115

Query: 279 DAIQDILGRIKTERGFRVSDEFFYNVIKIYGNVAGRIDKAVEALFTMPEYHCWPTVKTFN 458
           DAI+++L R+K E+  ++SDEFF ++IK+Y N+     +AV  L+ MP++HCWP+V+TFN
Sbjct: 116 DAIEELLTRMKMEK-CKLSDEFFRHLIKLYANIGKNAVQAVNILYRMPDFHCWPSVRTFN 174

Query: 459 FVLNMLVSAKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFQLLDELPKQ 638
            VLNMLV AKQ++++HEVYL A QLGV +DTCC NILIK LC+C  LDAAF LL E PKQ
Sbjct: 175 SVLNMLVCAKQYEMVHEVYLSASQLGVAVDTCCFNILIKALCQCGDLDAAFSLLQEAPKQ 234

Query: 639 GLKPNVRTYSTIMHFLCERGGVEEAFELYERMERAACDPDTIIFNTLISGLCKQGRVTDG 818
           G +PN  TY+T+MH LC+ G V EAFELYERMER  C PDTI FN LISGLCKQG V   
Sbjct: 235 GCRPNATTYATLMHGLCKSGRVSEAFELYERMEREVCYPDTITFNILISGLCKQGSVKQA 294

Query: 819 MKLFDRMGLKGCCPNSGSYQAILYGLL 899
           M L   M LKGC PNSGSYQA++YGLL
Sbjct: 295 MDLLHTMKLKGCYPNSGSYQALIYGLL 321



 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 55/225 (24%), Positives = 96/225 (42%)
 Frame = +3

Query: 222 PNEALYTLIIQKLSHAKKFDAIQDILGRIKTERGFRVSDEFFYNVIKIYGNVAGRIDKAV 401
           P+   +  ++  L  AK+++ + ++     ++ G  V    F  +IK      G +D A 
Sbjct: 168 PSVRTFNSVLNMLVCAKQYEMVHEVY-LSASQLGVAVDTCCFNILIKALCQ-CGDLDAAF 225

Query: 402 EALFTMPEYHCWPTVKTFNFVLNMLVSAKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGL 581
             L   P+  C P   T+  +++ L  + +     E+Y    +     DT   NILI GL
Sbjct: 226 SLLQEAPKQGCRPNATTYATLMHGLCKSGRVSEAFELYERMEREVCYPDTITFNILISGL 285

Query: 582 CECDKLDAAFQLLDELPKQGLKPNVRTYSTIMHFLCERGGVEEAFELYERMERAACDPDT 761
           C+   +  A  LL  +  +G  PN  +Y  +++ L +     EA +L   M      P  
Sbjct: 286 CKQGSVKQAMDLLHTMKLKGCYPNSGSYQALIYGLLDASDFVEANKLLSLMVSKGIFPSF 345

Query: 762 IIFNTLISGLCKQGRVTDGMKLFDRMGLKGCCPNSGSYQAILYGL 896
           + +  LI GLC    + D   +  +M  +G  P  G++  IL  L
Sbjct: 346 LSYKMLIDGLCDMDLLRDVDAVLTQMINQGFIPRMGTWMRILESL 390


>gb|EXC11739.1| hypothetical protein L484_020794 [Morus notabilis]
          Length = 405

 Score =  346 bits (887), Expect = 8e-93
 Identities = 166/293 (56%), Positives = 220/293 (75%), Gaps = 1/293 (0%)
 Frame = +3

Query: 24  IIHVILTDRRMVSRFNSTISSFDPLKRLNHKDWLAPNEVLKIFKCLRDPGSVLNAFDTIS 203
           ++H +L+   + S  +S+ SS  P  RL+HKDWLAP EVL++F  L +P S++ A +  S
Sbjct: 26  VLHFVLSLSSIPSSSSSSSSSEIP-SRLHHKDWLAPKEVLQVFSSLTNPNSIVPALNHYS 84

Query: 204 QRNDYKPNEALYTLIIQKLSHAKKFDAIQDILGRIKTERGFRVSDEFFYNVIKIYGNVAG 383
           +R DYKPNE L TLII  L+ A+ FD ++ ++ RIK ER   +SD+FF NVI++YGN+AG
Sbjct: 85  KRKDYKPNEPLLTLIINNLAEARLFDDVEVVVARIKAERNCNLSDDFFRNVIRVYGNLAG 144

Query: 384 RIDKAVEALFTMPEYH-CWPTVKTFNFVLNMLVSAKQFDVIHEVYLGAPQLGVEIDTCCL 560
           RI +A+E LF MPE++ CWPT KTFN VLN+LVSA+ FDV+HE+++ AP+LGV ID CCL
Sbjct: 145 RIKRAIEILFEMPEFYGCWPTAKTFNSVLNLLVSARLFDVVHELFVAAPKLGVVIDACCL 204

Query: 561 NILIKGLCECDKLDAAFQLLDELPKQGLKPNVRTYSTIMHFLCERGGVEEAFELYERMER 740
           NI+IKGLCEC KL+ A Q+LDE P+QG +PN+ T++T+MH+LC  G VEEA +L+ERME 
Sbjct: 205 NIMIKGLCECRKLEVALQMLDEFPRQGCEPNLLTFTTLMHYLCVHGKVEEAIKLFERMEE 264

Query: 741 AACDPDTIIFNTLISGLCKQGRVTDGMKLFDRMGLKGCCPNSGSYQAILYGLL 899
              +PDTI FN LI+GL +QGRV +GM L  RM LKGC PN GSYQ +  GLL
Sbjct: 265 EGIEPDTITFNVLIAGLRRQGRVDEGMVLLQRMKLKGCNPNVGSYQEVFNGLL 317


>ref|XP_004146072.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Cucumis sativus]
           gi|449503658|ref|XP_004162112.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Cucumis sativus]
          Length = 411

 Score =  343 bits (881), Expect = 4e-92
 Identities = 157/266 (59%), Positives = 208/266 (78%)
 Frame = +3

Query: 102 RLNHKDWLAPNEVLKIFKCLRDPGSVLNAFDTISQRNDYKPNEALYTLIIQKLSHAKKFD 281
           +L+H+DWL+PNEV+ I + ++ P SVL      S R DYKPN+ +YTL++ +L+  + FD
Sbjct: 49  KLSHRDWLSPNEVINIIQQIQHPSSVLAFLHQWSNRKDYKPNKEIYTLVVSRLAEGRLFD 108

Query: 282 AIQDILGRIKTERGFRVSDEFFYNVIKIYGNVAGRIDKAVEALFTMPEYHCWPTVKTFNF 461
            I+ ++ RIK ER FR+SDEFFY+VIKIYGNVAGR++KA++ LF MP Y+CWP+VKTFNF
Sbjct: 109 DIEKVMLRIKAERNFRLSDEFFYHVIKIYGNVAGRLNKAIDTLFDMPNYNCWPSVKTFNF 168

Query: 462 VLNMLVSAKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFQLLDELPKQG 641
           VLN+LVSAK FDV+HEVY+GAP+LG+EID CCLNIL+KGLC+   LDAA ++LDE P+Q 
Sbjct: 169 VLNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILVKGLCQSGNLDAALKVLDEFPQQR 228

Query: 642 LKPNVRTYSTIMHFLCERGGVEEAFELYERMERAACDPDTIIFNTLISGLCKQGRVTDGM 821
            +PNVRT+ST++H LCE G +  A EL+ +ME     PDTI FN LISGL K+ R+ + +
Sbjct: 229 CRPNVRTFSTLLHGLCENGELGRALELFCKMENEGVCPDTITFNILISGLRKKKRIEEAI 288

Query: 822 KLFDRMGLKGCCPNSGSYQAILYGLL 899
           +L  RM LKGC PN+G+YQ +LYGLL
Sbjct: 289 ELLGRMKLKGCYPNAGTYQEVLYGLL 314


>ref|XP_002882884.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328724|gb|EFH59143.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 409

 Score =  341 bits (874), Expect = 3e-91
 Identities = 159/273 (58%), Positives = 209/273 (76%)
 Frame = +3

Query: 81  SSFDPLKRLNHKDWLAPNEVLKIFKCLRDPGSVLNAFDTISQRNDYKPNEALYTLIIQKL 260
           S  D L RL HKDWLAPNEVLKIF+ ++DP  ++ A+   S+R DY+P E+LY L+I K 
Sbjct: 46  SGDDKLARLKHKDWLAPNEVLKIFENVKDPSFLMPAYQHYSKRKDYQPTESLYALLINKF 105

Query: 261 SHAKKFDAIQDILGRIKTERGFRVSDEFFYNVIKIYGNVAGRIDKAVEALFTMPEYHCWP 440
             AK FD I++++  IK E+  R S++FFYN+++IYGN+AGRI++A+E LF MP++ CWP
Sbjct: 106 GQAKMFDEIEEVMSTIKLEKRCRFSEDFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWP 165

Query: 441 TVKTFNFVLNMLVSAKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFQLL 620
           + K+FNF+LN+LVSAK FD IH++++ AP+LGVEID CCLNILIKGLCE   L+AA QLL
Sbjct: 166 SAKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLL 225

Query: 621 DELPKQGLKPNVRTYSTIMHFLCERGGVEEAFELYERMERAACDPDTIIFNTLISGLCKQ 800
           DE PKQ  +PNV T+S ++   C +G  EEAF+L ERME+   +PDTI FN LISGL K+
Sbjct: 226 DEFPKQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKK 285

Query: 801 GRVTDGMKLFDRMGLKGCCPNSGSYQAILYGLL 899
           GRV +G+ L +RM LKGC PN G+YQ +LYGLL
Sbjct: 286 GRVEEGIDLLERMKLKGCEPNPGTYQEVLYGLL 318



 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 51/218 (23%), Positives = 99/218 (45%)
 Frame = +3

Query: 222 PNEALYTLIIQKLSHAKKFDAIQDILGRIKTERGFRVSDEFFYNVIKIYGNVAGRIDKAV 401
           P+   +  I+  L  AK FD I  I      + G  + D    N++      +G ++ A+
Sbjct: 165 PSAKSFNFILNLLVSAKLFDEIHKIFVSAP-KLGVEI-DACCLNILIKGLCESGNLEAAL 222

Query: 402 EALFTMPEYHCWPTVKTFNFVLNMLVSAKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGL 581
           + L   P+    P V TF+ ++    +  +F+   ++     +  +E DT   NILI GL
Sbjct: 223 QLLDEFPKQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGL 282

Query: 582 CECDKLDAAFQLLDELPKQGLKPNVRTYSTIMHFLCERGGVEEAFELYERMERAACDPDT 761
            +  +++    LL+ +  +G +PN  TY  +++ L ++    EA E+  +M      P  
Sbjct: 283 RKKGRVEEGIDLLERMKLKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSF 342

Query: 762 IIFNTLISGLCKQGRVTDGMKLFDRMGLKGCCPNSGSY 875
           + +  ++ GLC+   V +   +  +M   G  P +G +
Sbjct: 343 LSYKKMVLGLCETKSVAEMDWVLRKMVNHGFVPKTGMW 380


>ref|XP_007022117.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           [Theobroma cacao] gi|508721745|gb|EOY13642.1|
           Pentatricopeptide repeat (PPR) superfamily protein,
           putative [Theobroma cacao]
          Length = 408

 Score =  339 bits (869), Expect = 1e-90
 Identities = 161/280 (57%), Positives = 212/280 (75%)
 Frame = +3

Query: 60  SRFNSTISSFDPLKRLNHKDWLAPNEVLKIFKCLRDPGSVLNAFDTISQRNDYKPNEALY 239
           S    T  +  PL +L HKDWL+PNE+LKIF  L++P SV++  +  S R DYKP E L+
Sbjct: 42  STHQPTAPTSPPLFKLTHKDWLSPNEILKIFDNLKEPTSVISVLNQYSARKDYKPTEPLF 101

Query: 240 TLIIQKLSHAKKFDAIQDILGRIKTERGFRVSDEFFYNVIKIYGNVAGRIDKAVEALFTM 419
           TL+I KL+ A+ FD I++I+ ++K E+  R+SD+FF NVIK YG+  GRI +A+E LF+M
Sbjct: 102 TLVINKLADAQDFDCIENIMEKLKHEKPCRLSDDFFQNVIKKYGHCGGRIKRAIETLFSM 161

Query: 420 PEYHCWPTVKTFNFVLNMLVSAKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKL 599
           P+Y  WP+VKTFN +L++LV+ K FDV+HE+Y   P+LG+EI+ C LNILIKGLCE  KL
Sbjct: 162 PDYGTWPSVKTFNIILSLLVANKLFDVVHEIYGKGPKLGIEIEACTLNILIKGLCENGKL 221

Query: 600 DAAFQLLDELPKQGLKPNVRTYSTIMHFLCERGGVEEAFELYERMERAACDPDTIIFNTL 779
           ++AFQ+LDE PKQG KPNVRT+ST+MH LCE+G V+EAFEL  RME    + D + FN L
Sbjct: 222 ESAFQVLDEFPKQGCKPNVRTFSTLMHGLCEKGKVDEAFELMGRMETEGIEADAVSFNIL 281

Query: 780 ISGLCKQGRVTDGMKLFDRMGLKGCCPNSGSYQAILYGLL 899
           ISGL KQGRV +G+KL ++M  KGC PN+GSYQ +LYGLL
Sbjct: 282 ISGLRKQGRVEEGVKLLEKMKRKGCYPNAGSYQEVLYGLL 321


>ref|XP_006407066.1| hypothetical protein EUTSA_v10020856mg [Eutrema salsugineum]
           gi|557108212|gb|ESQ48519.1| hypothetical protein
           EUTSA_v10020856mg [Eutrema salsugineum]
          Length = 404

 Score =  338 bits (866), Expect = 2e-90
 Identities = 157/268 (58%), Positives = 208/268 (77%)
 Frame = +3

Query: 96  LKRLNHKDWLAPNEVLKIFKCLRDPGSVLNAFDTISQRNDYKPNEALYTLIIQKLSHAKK 275
           L RL HKDWLAPNEVLKIF+ ++DP  ++ A+   S+R DY+P E LY L+I K   AK 
Sbjct: 46  LARLKHKDWLAPNEVLKIFENVKDPSFLMPAYQHYSKRKDYQPTEPLYALLINKFGQAKM 105

Query: 276 FDAIQDILGRIKTERGFRVSDEFFYNVIKIYGNVAGRIDKAVEALFTMPEYHCWPTVKTF 455
           FD I++++  +K E+  R S+EFFYN+++IYGN+AGRI++A+E LF MP++ CWP+VK+F
Sbjct: 106 FDEIEELMRNVKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSVKSF 165

Query: 456 NFVLNMLVSAKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFQLLDELPK 635
           NFVLN+LVSAK FD IH++++ AP+LGVEID CCLNILIKGLCE   L+AA Q+LDE PK
Sbjct: 166 NFVLNLLVSAKLFDEIHKIFVSAPRLGVEIDGCCLNILIKGLCESGNLEAALQVLDEFPK 225

Query: 636 QGLKPNVRTYSTIMHFLCERGGVEEAFELYERMERAACDPDTIIFNTLISGLCKQGRVTD 815
           Q  +PNV T+S ++   C +G  EEAF+L ERME+   +PDTI FN LISGL K+GRV +
Sbjct: 226 QKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEE 285

Query: 816 GMKLFDRMGLKGCCPNSGSYQAILYGLL 899
           G++L +RM +KGC PN G+YQ +LYGLL
Sbjct: 286 GIELLERMRVKGCQPNPGTYQEVLYGLL 313



 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 51/222 (22%), Positives = 101/222 (45%)
 Frame = +3

Query: 222 PNEALYTLIIQKLSHAKKFDAIQDILGRIKTERGFRVSDEFFYNVIKIYGNVAGRIDKAV 401
           P+   +  ++  L  AK FD I  I   +   R     D    N++      +G ++ A+
Sbjct: 160 PSVKSFNFVLNLLVSAKLFDEIHKIF--VSAPRLGVEIDGCCLNILIKGLCESGNLEAAL 217

Query: 402 EALFTMPEYHCWPTVKTFNFVLNMLVSAKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGL 581
           + L   P+    P V TF+ ++    +  +F+   ++     +  +E DT   NILI GL
Sbjct: 218 QVLDEFPKQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGL 277

Query: 582 CECDKLDAAFQLLDELPKQGLKPNVRTYSTIMHFLCERGGVEEAFELYERMERAACDPDT 761
            +  +++   +LL+ +  +G +PN  TY  +++ L ++    EA E+  +M      P  
Sbjct: 278 RKKGRVEEGIELLERMRVKGCQPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSF 337

Query: 762 IIFNTLISGLCKQGRVTDGMKLFDRMGLKGCCPNSGSYQAIL 887
           + +  ++ GLC+   V +   +  +M   G  P +G +  +L
Sbjct: 338 VSYKKMVLGLCETKSVEEMDWVLRQMVNHGFVPKTGMWWKVL 379


>ref|XP_004248491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Solanum lycopersicum]
          Length = 387

 Score =  337 bits (865), Expect = 3e-90
 Identities = 153/266 (57%), Positives = 209/266 (78%)
 Frame = +3

Query: 102 RLNHKDWLAPNEVLKIFKCLRDPGSVLNAFDTISQRNDYKPNEALYTLIIQKLSHAKKFD 281
           ++ + DWL+ NEV+KIF+ L++P S L   + IS R DY+PNEA+Y+++++ L+ AK FD
Sbjct: 35  QIQNSDWLSSNEVIKIFQNLKNPNSALTLLNQISNRKDYRPNEAIYSVVVKNLAIAKNFD 94

Query: 282 AIQDILGRIKTERGFRVSDEFFYNVIKIYGNVAGRIDKAVEALFTMPEYHCWPTVKTFNF 461
           AI+ ++ +IK ER  R+SDEFFYNVIKIYG++AGRI+++++ LF MP Y C+P+VKTFNF
Sbjct: 95  AIETLMEKIKIERKCRLSDEFFYNVIKIYGHLAGRINRSIDTLFDMPNYKCFPSVKTFNF 154

Query: 462 VLNMLVSAKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFQLLDELPKQG 641
           VLN+LV+ KQFDV+H+VY+   +LGVEID CCLNI+IKGLC C ++DAA+++ DE PKQ 
Sbjct: 155 VLNLLVNTKQFDVVHKVYVRGSELGVEIDACCLNIIIKGLCRCGEIDAAYKVFDEFPKQN 214

Query: 642 LKPNVRTYSTIMHFLCERGGVEEAFELYERMERAACDPDTIIFNTLISGLCKQGRVTDGM 821
             PNVRT+STIMH LC+ G V+EA  L +RME    +PD I+FNTLISGL KQ RV +G+
Sbjct: 215 CSPNVRTFSTIMHALCDHGRVDEALSLLDRMENENVEPDAIVFNTLISGLRKQRRVDEGI 274

Query: 822 KLFDRMGLKGCCPNSGSYQAILYGLL 899
            +F ++ LKGC PN G+YQ +LY LL
Sbjct: 275 DMFKKVMLKGCDPNPGTYQEVLYALL 300


>ref|XP_006299283.1| hypothetical protein CARUB_v10015437mg [Capsella rubella]
           gi|482567992|gb|EOA32181.1| hypothetical protein
           CARUB_v10015437mg [Capsella rubella]
          Length = 408

 Score =  336 bits (862), Expect = 6e-90
 Identities = 156/273 (57%), Positives = 208/273 (76%)
 Frame = +3

Query: 81  SSFDPLKRLNHKDWLAPNEVLKIFKCLRDPGSVLNAFDTISQRNDYKPNEALYTLIIQKL 260
           S  D L RL HKDWLAPNEVLKIF+ +++P  ++ A+   S+R DY+P E LY L+I K 
Sbjct: 46  SGEDKLARLKHKDWLAPNEVLKIFENVKEPSFLIPAYQHYSKRKDYQPTEPLYALLINKF 105

Query: 261 SHAKKFDAIQDILGRIKTERGFRVSDEFFYNVIKIYGNVAGRIDKAVEALFTMPEYHCWP 440
             AK FD I++++  +K E+  R S+EFFYN+++IYGN+ GRI++A+E LF+MP++ CWP
Sbjct: 106 GQAKMFDEIEEVMRIVKLEKRCRFSEEFFYNLMRIYGNLGGRINRAIEILFSMPDFGCWP 165

Query: 441 TVKTFNFVLNMLVSAKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFQLL 620
           + K+FNF+LN+LVSAK FD IH++++ AP+LGVEID CC+NILIKGLCE   L+AA QLL
Sbjct: 166 SPKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCMNILIKGLCESGNLEAALQLL 225

Query: 621 DELPKQGLKPNVRTYSTIMHFLCERGGVEEAFELYERMERAACDPDTIIFNTLISGLCKQ 800
           DE PKQ  +PNV T+S ++   C +G   EAFEL ERME+   +PDTI FN LISGL K+
Sbjct: 226 DEFPKQKSRPNVMTFSPLIRGFCNKGKFAEAFELLERMEKERIEPDTITFNILISGLRKK 285

Query: 801 GRVTDGMKLFDRMGLKGCCPNSGSYQAILYGLL 899
           GRV +G++L +RM LKGC PN G+YQ +LYGLL
Sbjct: 286 GRVEEGIQLLERMKLKGCQPNPGTYQEVLYGLL 318



 Score = 67.8 bits (164), Expect = 6e-09
 Identities = 56/237 (23%), Positives = 106/237 (44%), Gaps = 2/237 (0%)
 Frame = +3

Query: 171 GSVLNAFDTISQRNDYK--PNEALYTLIIQKLSHAKKFDAIQDILGRIKTERGFRVSDEF 344
           G +  A + +    D+   P+   +  I+  L  AK FD I  I      + G  + D  
Sbjct: 146 GRINRAIEILFSMPDFGCWPSPKSFNFILNLLVSAKLFDEIHKIFVSAP-KLGVEI-DAC 203

Query: 345 FYNVIKIYGNVAGRIDKAVEALFTMPEYHCWPTVKTFNFVLNMLVSAKQFDVIHEVYLGA 524
             N++      +G ++ A++ L   P+    P V TF+ ++    +  +F    E+    
Sbjct: 204 CMNILIKGLCESGNLEAALQLLDEFPKQKSRPNVMTFSPLIRGFCNKGKFAEAFELLERM 263

Query: 525 PQLGVEIDTCCLNILIKGLCECDKLDAAFQLLDELPKQGLKPNVRTYSTIMHFLCERGGV 704
            +  +E DT   NILI GL +  +++   QLL+ +  +G +PN  TY  +++ L ++   
Sbjct: 264 EKERIEPDTITFNILISGLRKKGRVEEGIQLLERMKLKGCQPNPGTYQEVLYGLLDKKRN 323

Query: 705 EEAFELYERMERAACDPDTIIFNTLISGLCKQGRVTDGMKLFDRMGLKGCCPNSGSY 875
            EA E+  +M      P  + +  ++ GLC+   V +   +  +M   G  P +G +
Sbjct: 324 LEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVAELDWVLRQMVNHGFVPKTGMW 380


>ref|NP_188076.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75274210|sp|Q9LUD6.1|PP230_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g14580, mitochondrial; Flags: Precursor
           gi|9294380|dbj|BAB02390.1| unnamed protein product
           [Arabidopsis thaliana] gi|119935972|gb|ABM06049.1|
           At3g14580 [Arabidopsis thaliana]
           gi|332642020|gb|AEE75541.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 405

 Score =  336 bits (861), Expect = 8e-90
 Identities = 158/273 (57%), Positives = 208/273 (76%)
 Frame = +3

Query: 81  SSFDPLKRLNHKDWLAPNEVLKIFKCLRDPGSVLNAFDTISQRNDYKPNEALYTLIIQKL 260
           S  D L RL HKDWLAPNEVLKIF  ++DP  +L A+   S+R DY+P E+LY L+I K 
Sbjct: 46  SGDDRLARLRHKDWLAPNEVLKIFDNVKDPSFLLPAYQHYSKRKDYQPTESLYALMINKF 105

Query: 261 SHAKKFDAIQDILGRIKTERGFRVSDEFFYNVIKIYGNVAGRIDKAVEALFTMPEYHCWP 440
             AK +D I++++  IK E+  R S+EFFYN+++IYGN+AGRI++A+E LF MP++ CWP
Sbjct: 106 GQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWP 165

Query: 441 TVKTFNFVLNMLVSAKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFQLL 620
           + K+FNF+LN+LVSAK FD IH++++ AP+LGVEID CCLNILIKGLCE   L+AA QLL
Sbjct: 166 SSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLL 225

Query: 621 DELPKQGLKPNVRTYSTIMHFLCERGGVEEAFELYERMERAACDPDTIIFNTLISGLCKQ 800
           DE P+Q  +PNV T+S ++   C +G  EEAF+L ERME+   +PDTI FN LISGL K+
Sbjct: 226 DEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKK 285

Query: 801 GRVTDGMKLFDRMGLKGCCPNSGSYQAILYGLL 899
           GRV +G+ L +RM +KGC PN G+YQ +LYGLL
Sbjct: 286 GRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLL 318



 Score = 63.9 bits (154), Expect = 8e-08
 Identities = 47/198 (23%), Positives = 91/198 (45%)
 Frame = +3

Query: 222 PNEALYTLIIQKLSHAKKFDAIQDILGRIKTERGFRVSDEFFYNVIKIYGNVAGRIDKAV 401
           P+   +  I+  L  AK FD I  I      + G  + D    N++      +G ++ A+
Sbjct: 165 PSSKSFNFILNLLVSAKLFDEIHKIFVSAP-KLGVEI-DACCLNILIKGLCESGNLEAAL 222

Query: 402 EALFTMPEYHCWPTVKTFNFVLNMLVSAKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGL 581
           + L   P+    P V TF+ ++    +  +F+   ++     +  +E DT   NILI GL
Sbjct: 223 QLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGL 282

Query: 582 CECDKLDAAFQLLDELPKQGLKPNVRTYSTIMHFLCERGGVEEAFELYERMERAACDPDT 761
            +  +++    LL+ +  +G +PN  TY  +++ L ++    EA E+  +M      P  
Sbjct: 283 RKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSF 342

Query: 762 IIFNTLISGLCKQGRVTD 815
           + +  ++ GLC+   V +
Sbjct: 343 LSYKKMVLGLCETKSVVE 360


>ref|XP_006360029.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Solanum tuberosum]
          Length = 387

 Score =  332 bits (852), Expect = 9e-89
 Identities = 152/266 (57%), Positives = 206/266 (77%)
 Frame = +3

Query: 102 RLNHKDWLAPNEVLKIFKCLRDPGSVLNAFDTISQRNDYKPNEALYTLIIQKLSHAKKFD 281
           ++ + DWL+ NEV+KIF+ L++  S L   + IS R DY+PNEA+Y+++++ L+ AK FD
Sbjct: 35  QIQNSDWLSSNEVIKIFQNLKNANSALTLLNQISNRKDYRPNEAIYSVVVKNLAIAKNFD 94

Query: 282 AIQDILGRIKTERGFRVSDEFFYNVIKIYGNVAGRIDKAVEALFTMPEYHCWPTVKTFNF 461
           AI+ ++ +IK ER  R+SDEFFYNVIKIYG++AGRI++A++  F MP Y C+P+VKTFNF
Sbjct: 95  AIESLMEKIKIERKCRLSDEFFYNVIKIYGHLAGRINRAIDTFFDMPNYKCFPSVKTFNF 154

Query: 462 VLNMLVSAKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFQLLDELPKQG 641
           +LN+LV+ KQFDV+H+VYL   +LGVEID CCLNI+IKGLC C ++ AA+++ DE PKQ 
Sbjct: 155 LLNLLVNTKQFDVVHKVYLRGSELGVEIDACCLNIIIKGLCRCGEIAAAYKVFDEFPKQN 214

Query: 642 LKPNVRTYSTIMHFLCERGGVEEAFELYERMERAACDPDTIIFNTLISGLCKQGRVTDGM 821
             PNVRT+STIMH LC+ G V+EA  L ERME    +PD I+FNTLISGL KQ RV +G+
Sbjct: 215 CSPNVRTFSTIMHALCDHGRVDEALSLLERMENEDVEPDAIVFNTLISGLRKQRRVDEGI 274

Query: 822 KLFDRMGLKGCCPNSGSYQAILYGLL 899
            +F ++ LKGC PN G+YQ +LY LL
Sbjct: 275 DMFKKVMLKGCDPNPGTYQEVLYALL 300


>emb|CCI55338.1| PH01B019A14.7 [Phyllostachys edulis]
          Length = 359

 Score =  329 bits (843), Expect = 1e-87
 Identities = 151/261 (57%), Positives = 196/261 (75%)
 Frame = +3

Query: 102 RLNHKDWLAPNEVLKIFKCLRDPGSVLNAFDTISQRNDYKPNEALYTLIIQKLSHAKKFD 281
           RL+HKDWLAPNEVLKIF  +RDP  +  AF     R DYKPNE LY+L+I +++ A++F 
Sbjct: 29  RLDHKDWLAPNEVLKIFANIRDPSLITRAFKRACTRRDYKPNETLYSLMIDRIACARRFG 88

Query: 282 AIQDILGRIKTERGFRVSDEFFYNVIKIYGNVAGRIDKAVEALFTMPEYHCWPTVKTFNF 461
            ++++L R + E+ FR SDEFFY +IK+YGNVA   +KA+E LF MP Y+CWP+ KTFN+
Sbjct: 89  DVEELLARARIEK-FRFSDEFFYRLIKMYGNVANHPEKAIETLFAMPGYNCWPSTKTFNY 147

Query: 462 VLNMLVSAKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFQLLDELPKQG 641
           VL+MLV  +Q++V+HEVY  AP+LGV +DTCC NIL+KGLC+  K D A  LL E+PKQG
Sbjct: 148 VLHMLVCKRQYEVVHEVYSSAPRLGVTLDTCCFNILVKGLCQLGKFDEAISLLHEMPKQG 207

Query: 642 LKPNVRTYSTIMHFLCERGGVEEAFELYERMERAACDPDTIIFNTLISGLCKQGRVTDGM 821
             PNV TYST+MHFLC+ G V+EAFEL+ERM +     DT+++N LISGLC++GRVT   
Sbjct: 208 CLPNVNTYSTLMHFLCQHGQVDEAFELFERMWKEDIAADTVVYNILISGLCREGRVTKAF 267

Query: 822 KLFDRMGLKGCCPNSGSYQAI 884
            LF  M  +GC PNSG+YQ I
Sbjct: 268 DLFKSMASEGCYPNSGTYQLI 288



 Score = 63.9 bits (154), Expect = 8e-08
 Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 3/184 (1%)
 Frame = +3

Query: 354 VIKIYGNVA--GRIDKAVEALFTMPEYHCWPTVKTFNFVLNMLVSAKQFDVIHEVYLGAP 527
           V+KI+ N+     I +A +   T  +Y   P    ++ +++ +  A++F  + E+   A 
Sbjct: 41  VLKIFANIRDPSLITRAFKRACTRRDYK--PNETLYSLMIDRIACARRFGDVEELLARAR 98

Query: 528 QLGVEIDTCCLNILIKGLCE-CDKLDAAFQLLDELPKQGLKPNVRTYSTIMHFLCERGGV 704
                        LIK      +  + A + L  +P     P+ +T++ ++H L  +   
Sbjct: 99  IEKFRFSDEFFYRLIKMYGNVANHPEKAIETLFAMPGYNCWPSTKTFNYVLHMLVCKRQY 158

Query: 705 EEAFELYERMERAACDPDTIIFNTLISGLCKQGRVTDGMKLFDRMGLKGCCPNSGSYQAI 884
           E   E+Y    R     DT  FN L+ GLC+ G+  + + L   M  +GC PN  +Y  +
Sbjct: 159 EVVHEVYSSAPRLGVTLDTCCFNILVKGLCQLGKFDEAISLLHEMPKQGCLPNVNTYSTL 218

Query: 885 LYGL 896
           ++ L
Sbjct: 219 MHFL 222


>ref|XP_002521673.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539064|gb|EEF40660.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 341

 Score =  329 bits (843), Expect = 1e-87
 Identities = 159/254 (62%), Positives = 199/254 (78%), Gaps = 1/254 (0%)
 Frame = +3

Query: 141 LKIFKCLRDPGSVLNAFDTISQRNDYKPNEALYTLIIQKLSHAKKFDAIQDILGRIKTER 320
           ++IF+ ++DP SV + +D  + R DYKPNEALYTL+I KL+ AK FDAI+DI+ RIK E+
Sbjct: 1   MRIFESIKDPNSVFSVWDQYTNRKDYKPNEALYTLVINKLAQAKNFDAIEDIMQRIKLEK 60

Query: 321 GFRVSDEFFYNVIKIYGNVAGRIDKAVEALFTMPE-YHCWPTVKTFNFVLNMLVSAKQFD 497
             R+S+ FFYNVIKIYG++AGRI  A++ LF MP  Y+CWP VKTFN VLN+LVSA+ FD
Sbjct: 61  SCRLSNGFFYNVIKIYGHLAGRIKVAIDTLFDMPRGYNCWPDVKTFNLVLNLLVSARIFD 120

Query: 498 VIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFQLLDELPKQGLKPNVRTYSTIM 677
           V+HE+Y  AP LGVEID CCLNILIKGLCE   L+AAF +LDE PKQ  KPNVRT+ST+M
Sbjct: 121 VVHEIYEKAPILGVEIDACCLNILIKGLCENGDLEAAFYVLDEFPKQRCKPNVRTFSTLM 180

Query: 678 HFLCERGGVEEAFELYERMERAACDPDTIIFNTLISGLCKQGRVTDGMKLFDRMGLKGCC 857
           H+LC +G V +AF L +RME    + DTI FN LISGL K+GR+ +GM+L  +M LKGC 
Sbjct: 181 HYLCAKGEVNQAFGLLDRMENEGIEVDTITFNILISGLRKRGRIEEGMELLVKMKLKGCE 240

Query: 858 PNSGSYQAILYGLL 899
           PN+GSYQ +LYGLL
Sbjct: 241 PNAGSYQEVLYGLL 254


>ref|XP_004976824.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Setaria italica]
          Length = 363

 Score =  328 bits (841), Expect = 2e-87
 Identities = 150/266 (56%), Positives = 204/266 (76%)
 Frame = +3

Query: 102 RLNHKDWLAPNEVLKIFKCLRDPGSVLNAFDTISQRNDYKPNEALYTLIIQKLSHAKKFD 281
           RL+HKDWLAPNEVLKIF  +RDPG + + F+    R DYKP+EALY+L+I KL+ A++F 
Sbjct: 29  RLDHKDWLAPNEVLKIFANIRDPGLITSVFNKACNRRDYKPSEALYSLMIDKLACARRFS 88

Query: 282 AIQDILGRIKTERGFRVSDEFFYNVIKIYGNVAGRIDKAVEALFTMPEYHCWPTVKTFNF 461
            ++++L + + E+ FR SDEFFY +IK+YGNVA    KA++ LF MP Y+CWP+ KTFN+
Sbjct: 89  DVEELLAKARAEK-FRFSDEFFYRLIKMYGNVAEHPQKAIDTLFAMPGYNCWPSTKTFNY 147

Query: 462 VLNMLVSAKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFQLLDELPKQG 641
           VL+MLV  +Q++V+HE+Y  AP+LGV +DTC  NIL+KGLC+  K+D A  LL E+PKQG
Sbjct: 148 VLHMLVCKRQYEVVHEIYSSAPRLGVTLDTCSFNILVKGLCQFGKIDEAMSLLHEMPKQG 207

Query: 642 LKPNVRTYSTIMHFLCERGGVEEAFELYERMERAACDPDTIIFNTLISGLCKQGRVTDGM 821
            +PNV TYST+MHFLC+R  V++AFEL+ERM++     DT+++N LISGLCK+ RVT+  
Sbjct: 208 CQPNVTTYSTLMHFLCQRCQVDKAFELFERMQKQDIAADTVVYNILISGLCKEERVTEAF 267

Query: 822 KLFDRMGLKGCCPNSGSYQAILYGLL 899
            LF  M  +GC PNSG+YQ +L GL+
Sbjct: 268 GLFKSMTSEGCYPNSGTYQVLLDGLI 293



 Score = 88.2 bits (217), Expect = 4e-15
 Identities = 60/236 (25%), Positives = 105/236 (44%), Gaps = 2/236 (0%)
 Frame = +3

Query: 186 AFDTISQRNDYK--PNEALYTLIIQKLSHAKKFDAIQDILGRIKTERGFRVSDEFFYNVI 359
           A DT+     Y   P+   +  ++  L   ++++ + +I       R     D   +N++
Sbjct: 126 AIDTLFAMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEIYS--SAPRLGVTLDTCSFNIL 183

Query: 360 KIYGNVAGRIDKAVEALFTMPEYHCWPTVKTFNFVLNMLVSAKQFDVIHEVYLGAPQLGV 539
                  G+ID+A+  L  MP+  C P V T++ +++ L    Q D   E++    +  +
Sbjct: 184 VKGLCQFGKIDEAMSLLHEMPKQGCQPNVTTYSTLMHFLCQRCQVDKAFELFERMQKQDI 243

Query: 540 EIDTCCLNILIKGLCECDKLDAAFQLLDELPKQGLKPNVRTYSTIMHFLCERGGVEEAFE 719
             DT   NILI GLC+ +++  AF L   +  +G  PN  TY  ++  L   G   EA  
Sbjct: 244 AADTVVYNILISGLCKEERVTEAFGLFKSMTSEGCYPNSGTYQVLLDGLISSGKFGEAKN 303

Query: 720 LYERMERAACDPDTIIFNTLISGLCKQGRVTDGMKLFDRMGLKGCCPNSGSYQAIL 887
           L   M   +  P    +  LI GLC    + D   +  +M  +G  P  G+++ +L
Sbjct: 304 LISVMSTESVRPSFQSYKLLIDGLCSDDCLDDAHLVLKQMVGQGFVPRMGTWRKLL 359


>gb|EMT16192.1| hypothetical protein F775_07734 [Aegilops tauschii]
          Length = 364

 Score =  325 bits (833), Expect = 1e-86
 Identities = 150/266 (56%), Positives = 197/266 (74%)
 Frame = +3

Query: 102 RLNHKDWLAPNEVLKIFKCLRDPGSVLNAFDTISQRNDYKPNEALYTLIIQKLSHAKKFD 281
           RL+HKDWLAPNEVLKIF  +RD   + + F     R DYKP+EALY L+I +L  A++  
Sbjct: 29  RLDHKDWLAPNEVLKIFASIRDAALITSVFKKACARRDYKPSEALYGLMIDRLPRARRVG 88

Query: 282 AIQDILGRIKTERGFRVSDEFFYNVIKIYGNVAGRIDKAVEALFTMPEYHCWPTVKTFNF 461
              ++L R + ER  RVSDEFFY +IK+YGNVA   +KA+E L+ MP+Y CWP+ KTFN+
Sbjct: 89  VAWELLARARAER-VRVSDEFFYRLIKMYGNVANHPEKAMETLYAMPDYGCWPSTKTFNY 147

Query: 462 VLNMLVSAKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFQLLDELPKQG 641
           VL+MLV  +Q++V+HEVY  AP+LGVE+DTCC NILIKGLC+  + + A  LLDE+PKQ 
Sbjct: 148 VLHMLVCKRQYEVVHEVYASAPRLGVELDTCCFNILIKGLCQFGRFNEALSLLDEMPKQE 207

Query: 642 LKPNVRTYSTIMHFLCERGGVEEAFELYERMERAACDPDTIIFNTLISGLCKQGRVTDGM 821
            +PNV TYST+MHFLC +  V+EAF+L+ERM +   D DT+++N L+SGLC+QGRVT   
Sbjct: 208 CRPNVTTYSTLMHFLCRKSRVDEAFKLFERMRKEEIDADTVVYNILVSGLCRQGRVTSAY 267

Query: 822 KLFDRMGLKGCCPNSGSYQAILYGLL 899
            LF  M  +GC PNSG+YQ +L GL+
Sbjct: 268 DLFKSMSSEGCHPNSGTYQVLLDGLV 293



 Score = 82.4 bits (202), Expect = 2e-13
 Identities = 59/259 (22%), Positives = 116/259 (44%), Gaps = 9/259 (3%)
 Frame = +3

Query: 150 FKCLRDPGSVLN----AFDTISQRNDYK--PNEALYTLIIQKLSHAKKFDAIQDILG--- 302
           ++ ++  G+V N    A +T+    DY   P+   +  ++  L   ++++ + ++     
Sbjct: 110 YRLIKMYGNVANHPEKAMETLYAMPDYGCWPSTKTFNYVLHMLVCKRQYEVVHEVYASAP 169

Query: 303 RIKTERGFRVSDEFFYNVIKIYGNVAGRIDKAVEALFTMPEYHCWPTVKTFNFVLNMLVS 482
           R+  E      D   +N++       GR ++A+  L  MP+  C P V T++ +++ L  
Sbjct: 170 RLGVEL-----DTCCFNILIKGLCQFGRFNEALSLLDEMPKQECRPNVTTYSTLMHFLCR 224

Query: 483 AKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFQLLDELPKQGLKPNVRT 662
             + D   +++    +  ++ DT   NIL+ GLC   ++ +A+ L   +  +G  PN  T
Sbjct: 225 KSRVDEAFKLFERMRKEEIDADTVVYNILVSGLCRQGRVTSAYDLFKSMSSEGCHPNSGT 284

Query: 663 YSTIMHFLCERGGVEEAFELYERMERAACDPDTIIFNTLISGLCKQGRVTDGMKLFDRMG 842
           Y  ++  L       EA +L   M   +  P    +  LI GLC    + D   +  +M 
Sbjct: 285 YQVLLDGLVASKKFVEAKDLVTMMSAESLRPSFSSYKLLIDGLCSVNCLDDAHHVLKQMV 344

Query: 843 LKGCCPNSGSYQAILYGLL 899
            +G  P  G++  +L  LL
Sbjct: 345 DQGFVPRMGTWTKLLTSLL 363


>ref|XP_002447107.1| hypothetical protein SORBIDRAFT_06g028710 [Sorghum bicolor]
           gi|241938290|gb|EES11435.1| hypothetical protein
           SORBIDRAFT_06g028710 [Sorghum bicolor]
          Length = 363

 Score =  325 bits (833), Expect = 1e-86
 Identities = 149/266 (56%), Positives = 200/266 (75%)
 Frame = +3

Query: 102 RLNHKDWLAPNEVLKIFKCLRDPGSVLNAFDTISQRNDYKPNEALYTLIIQKLSHAKKFD 281
           RL+HKDWLAPNEVLKIF  +RDP  + + F     R DYKP+EALY+L+I KL+ A++F 
Sbjct: 29  RLDHKDWLAPNEVLKIFANIRDPSLINSVFKKACSRIDYKPSEALYSLMIDKLAFARRFS 88

Query: 282 AIQDILGRIKTERGFRVSDEFFYNVIKIYGNVAGRIDKAVEALFTMPEYHCWPTVKTFNF 461
            ++++L + KTE+  R SDEFFY +IK+YGNVA    KA++ LF MP Y+CWP+ KTFN+
Sbjct: 89  DVEELLSKAKTEK-LRFSDEFFYRLIKMYGNVAEHPQKAIDTLFAMPGYNCWPSTKTFNY 147

Query: 462 VLNMLVSAKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFQLLDELPKQG 641
           VL+MLV  +Q++V+HE+Y  AP+LGV +DTC  NIL+KGLC+C K D A  LL E+PKQG
Sbjct: 148 VLHMLVCKRQYEVVHEIYSSAPRLGVTLDTCSFNILVKGLCQCSKFDEAISLLHEMPKQG 207

Query: 642 LKPNVRTYSTIMHFLCERGGVEEAFELYERMERAACDPDTIIFNTLISGLCKQGRVTDGM 821
            +PNV TYST MHFLC+R  V++AFEL+ERM +     DT+++N LISGLC++ RV++  
Sbjct: 208 CQPNVATYSTFMHFLCQRSLVDKAFELFERMRKQDIAADTVVYNILISGLCREERVSEAF 267

Query: 822 KLFDRMGLKGCCPNSGSYQAILYGLL 899
            LF  M  +GC PNSG+YQ +L GL+
Sbjct: 268 DLFKSMTSEGCYPNSGTYQVLLDGLI 293



 Score = 84.7 bits (208), Expect = 4e-14
 Identities = 58/236 (24%), Positives = 99/236 (41%), Gaps = 2/236 (0%)
 Frame = +3

Query: 186 AFDTISQRNDYK--PNEALYTLIIQKLSHAKKFDAIQDILGRIKTERGFRVSDEFFYNVI 359
           A DT+     Y   P+   +  ++  L   ++++ + +I       R     D   +N++
Sbjct: 126 AIDTLFAMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEIYS--SAPRLGVTLDTCSFNIL 183

Query: 360 KIYGNVAGRIDKAVEALFTMPEYHCWPTVKTFNFVLNMLVSAKQFDVIHEVYLGAPQLGV 539
                   + D+A+  L  MP+  C P V T++  ++ L      D   E++    +  +
Sbjct: 184 VKGLCQCSKFDEAISLLHEMPKQGCQPNVATYSTFMHFLCQRSLVDKAFELFERMRKQDI 243

Query: 540 EIDTCCLNILIKGLCECDKLDAAFQLLDELPKQGLKPNVRTYSTIMHFLCERGGVEEAFE 719
             DT   NILI GLC  +++  AF L   +  +G  PN  TY  ++  L   G   EA  
Sbjct: 244 AADTVVYNILISGLCREERVSEAFDLFKSMTSEGCYPNSGTYQVLLDGLISLGKFFEAKS 303

Query: 720 LYERMERAACDPDTIIFNTLISGLCKQGRVTDGMKLFDRMGLKGCCPNSGSYQAIL 887
           L   M      P    +  LI GLC +  V D   +  +M  +G  P  G++  +L
Sbjct: 304 LVSTMSTEGVRPSFQSYKLLIDGLCSEDCVDDAHLVLKQMVGQGFVPRMGTWTKLL 359


>dbj|BAK08007.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 363

 Score =  323 bits (828), Expect = 6e-86
 Identities = 148/266 (55%), Positives = 198/266 (74%)
 Frame = +3

Query: 102 RLNHKDWLAPNEVLKIFKCLRDPGSVLNAFDTISQRNDYKPNEALYTLIIQKLSHAKKFD 281
           RL+H+DWLAPNEVLKIF  +RD   + + F     R DYKP+EALY L+I +L+ A++F 
Sbjct: 29  RLDHRDWLAPNEVLKIFASIRDAALITSVFRKACARRDYKPSEALYGLMIDRLAGARRFG 88

Query: 282 AIQDILGRIKTERGFRVSDEFFYNVIKIYGNVAGRIDKAVEALFTMPEYHCWPTVKTFNF 461
            ++++L R + ER FR SD+FFY +IK+YGNVA   +KA+E L+ M EY CWP+ KTFN+
Sbjct: 89  DVEELLARARAER-FRFSDDFFYRLIKMYGNVANHPEKAMETLYAMSEYGCWPSTKTFNY 147

Query: 462 VLNMLVSAKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFQLLDELPKQG 641
           VL+MLV  +Q++V+HEVY  AP+LGVE+DTCC NILIKGLC+  + + A  LLDE+PKQ 
Sbjct: 148 VLHMLVCRRQYEVVHEVYSSAPRLGVELDTCCFNILIKGLCQFGRFNEALSLLDEMPKQD 207

Query: 642 LKPNVRTYSTIMHFLCERGGVEEAFELYERMERAACDPDTIIFNTLISGLCKQGRVTDGM 821
            +PN  TYST+MHFLC    V+EAFEL+ERM +   D DT+++N L+SGLC++GRVT   
Sbjct: 208 CRPNAMTYSTLMHFLCRNCRVDEAFELFERMRKEEIDADTVVYNILVSGLCREGRVTSAY 267

Query: 822 KLFDRMGLKGCCPNSGSYQAILYGLL 899
            LF  M  +GC PNSG+YQ +L GL+
Sbjct: 268 DLFKSMSSQGCHPNSGTYQVLLDGLV 293



 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 56/258 (21%), Positives = 113/258 (43%), Gaps = 9/258 (3%)
 Frame = +3

Query: 150 FKCLRDPGSVLN----AFDTISQRNDYK--PNEALYTLIIQKLSHAKKFDAIQDILG--- 302
           ++ ++  G+V N    A +T+   ++Y   P+   +  ++  L   ++++ + ++     
Sbjct: 110 YRLIKMYGNVANHPEKAMETLYAMSEYGCWPSTKTFNYVLHMLVCRRQYEVVHEVYSSAP 169

Query: 303 RIKTERGFRVSDEFFYNVIKIYGNVAGRIDKAVEALFTMPEYHCWPTVKTFNFVLNMLVS 482
           R+  E      D   +N++       GR ++A+  L  MP+  C P   T++ +++ L  
Sbjct: 170 RLGVEL-----DTCCFNILIKGLCQFGRFNEALSLLDEMPKQDCRPNAMTYSTLMHFLCR 224

Query: 483 AKQFDVIHEVYLGAPQLGVEIDTCCLNILIKGLCECDKLDAAFQLLDELPKQGLKPNVRT 662
             + D   E++    +  ++ DT   NIL+ GLC   ++ +A+ L   +  QG  PN  T
Sbjct: 225 NCRVDEAFELFERMRKEEIDADTVVYNILVSGLCREGRVTSAYDLFKSMSSQGCHPNSGT 284

Query: 663 YSTIMHFLCERGGVEEAFELYERMERAACDPDTIIFNTLISGLCKQGRVTDGMKLFDRMG 842
           Y  ++  L       EA +L   M   +  P    +  LI G C    + D   +  +M 
Sbjct: 285 YQVLLDGLVASKNFVEAKDLVGMMSAESLRPSFSSYKLLIDGFCSVNCLDDAHHVLKQMV 344

Query: 843 LKGCCPNSGSYQAILYGL 896
            +G  P   ++  +L  L
Sbjct: 345 DQGFVPRMSTWTKLLTSL 362