BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00035434
         (244 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat...   123   3e-26
emb|CBI36364.3| unnamed protein product [Vitis vinifera]              123   3e-26
ref|NP_001141725.1| hypothetical protein [Zea mays] gi|194705708...   112   4e-23
ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [S...   111   9e-23
ref|XP_006841418.1| hypothetical protein AMTR_s00003p00032470 [A...   111   1e-22
ref|XP_007198996.1| hypothetical protein PRUPE_ppa002176mg [Prun...   111   1e-22
ref|NP_567948.1| pentatricopeptide repeat-containing protein [Ar...   110   2e-22
ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22
emb|CBI32403.3| unnamed protein product [Vitis vinifera]              110   2e-22
emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]   110   2e-22
gb|EXC20588.1| hypothetical protein L484_027143 [Morus notabilis]     110   2e-22
ref|XP_007146392.1| hypothetical protein PHAVU_006G036400g [Phas...   110   2e-22
ref|XP_004987089.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22
ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22
ref|XP_006404655.1| hypothetical protein EUTSA_v10000053mg [Eutr...   110   3e-22
ref|XP_004246881.1| PREDICTED: pentatricopeptide repeat-containi...   110   3e-22
ref|XP_002878586.1| pentatricopeptide repeat-containing protein ...   110   3e-22
ref|NP_179798.1| pentatricopeptide repeat-containing protein [Ar...   110   3e-22
ref|XP_007042438.1| Tetratricopeptide repeat (TPR)-like superfam...   109   3e-22
ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containi...   109   3e-22

>ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Vitis vinifera]
          Length = 1088

 Score =  123 bits (308), Expect = 3e-26
 Identities = 57/68 (83%), Positives = 61/68 (89%)
 Frame = -3

Query: 242  SERLAIALGLISLPKKSTIRVFKNLRICGDCHTAAKFISKIMHCQIIVRDTNRFHHFEHG 63
            SERLA++LGLISLPKKSTIRVFKNLRICGDCHTA KFISKI   +II RDTNRFHHFE+G
Sbjct: 1021 SERLALSLGLISLPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHHFENG 1080

Query: 62   ACSCRDYW 39
             CSC DYW
Sbjct: 1081 KCSCGDYW 1088


>emb|CBI36364.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  123 bits (308), Expect = 3e-26
 Identities = 57/68 (83%), Positives = 61/68 (89%)
 Frame = -3

Query: 242 SERLAIALGLISLPKKSTIRVFKNLRICGDCHTAAKFISKIMHCQIIVRDTNRFHHFEHG 63
           SERLA++LGLISLPKKSTIRVFKNLRICGDCHTA KFISKI   +II RDTNRFHHFE+G
Sbjct: 765 SERLALSLGLISLPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHHFENG 824

Query: 62  ACSCRDYW 39
            CSC DYW
Sbjct: 825 KCSCGDYW 832


>ref|NP_001141725.1| hypothetical protein [Zea mays] gi|194705708|gb|ACF86938.1| unknown
           [Zea mays] gi|413956425|gb|AFW89074.1| hypothetical
           protein ZEAMMB73_742653 [Zea mays]
          Length = 635

 Score =  112 bits (281), Expect = 4e-23
 Identities = 49/68 (72%), Positives = 59/68 (86%)
 Frame = -3

Query: 242 SERLAIALGLISLPKKSTIRVFKNLRICGDCHTAAKFISKIMHCQIIVRDTNRFHHFEHG 63
           SERLA+A G+I+ PK S I+VFKNLRICGDCHT  K ISKI+  +IIVRD+NRFHHF++G
Sbjct: 568 SERLAVAFGIIATPKGSPIKVFKNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHFKNG 627

Query: 62  ACSCRDYW 39
           +CSCRDYW
Sbjct: 628 SCSCRDYW 635


>ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
           gi|241922063|gb|EER95207.1| hypothetical protein
           SORBIDRAFT_01g041740 [Sorghum bicolor]
          Length = 635

 Score =  111 bits (278), Expect = 9e-23
 Identities = 48/68 (70%), Positives = 59/68 (86%)
 Frame = -3

Query: 242 SERLAIALGLISLPKKSTIRVFKNLRICGDCHTAAKFISKIMHCQIIVRDTNRFHHFEHG 63
           SERLA+A G+I+ PK + I+VFKNLRICGDCHT  K ISKI+  +IIVRD+NRFHHF++G
Sbjct: 568 SERLAVAFGIIATPKGAPIKVFKNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHFKNG 627

Query: 62  ACSCRDYW 39
           +CSCRDYW
Sbjct: 628 SCSCRDYW 635


>ref|XP_006841418.1| hypothetical protein AMTR_s00003p00032470 [Amborella trichopoda]
           gi|548843439|gb|ERN03093.1| hypothetical protein
           AMTR_s00003p00032470 [Amborella trichopoda]
          Length = 791

 Score =  111 bits (277), Expect = 1e-22
 Identities = 48/68 (70%), Positives = 56/68 (82%)
 Frame = -3

Query: 242 SERLAIALGLISLPKKSTIRVFKNLRICGDCHTAAKFISKIMHCQIIVRDTNRFHHFEHG 63
           SE+LA+  GL+ LPK S IRV KNLRICGDCHTA KF+SK++  +IIVRD  RFHHF+HG
Sbjct: 724 SEKLAVGFGLLKLPKGSEIRVLKNLRICGDCHTAMKFMSKVVEREIIVRDGKRFHHFKHG 783

Query: 62  ACSCRDYW 39
            CSCRDYW
Sbjct: 784 ECSCRDYW 791


>ref|XP_007198996.1| hypothetical protein PRUPE_ppa002176mg [Prunus persica]
           gi|462394396|gb|EMJ00195.1| hypothetical protein
           PRUPE_ppa002176mg [Prunus persica]
          Length = 705

 Score =  111 bits (277), Expect = 1e-22
 Identities = 50/68 (73%), Positives = 56/68 (82%)
 Frame = -3

Query: 242 SERLAIALGLISLPKKSTIRVFKNLRICGDCHTAAKFISKIMHCQIIVRDTNRFHHFEHG 63
           SERLAIA GLIS P K+ IR+FKNLR+CGDCH A KFIS I   +IIVRD+NRFHHF+ G
Sbjct: 638 SERLAIAFGLISTPPKTPIRIFKNLRVCGDCHNATKFISVITEREIIVRDSNRFHHFKDG 697

Query: 62  ACSCRDYW 39
           ACSC DYW
Sbjct: 698 ACSCGDYW 705


>ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635622|sp|O81767.2|PP348_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
           gi|332660906|gb|AEE86306.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 823

 Score =  110 bits (276), Expect = 2e-22
 Identities = 48/68 (70%), Positives = 57/68 (83%)
 Frame = -3

Query: 242 SERLAIALGLISLPKKSTIRVFKNLRICGDCHTAAKFISKIMHCQIIVRDTNRFHHFEHG 63
           SERLAIA  LI+ P K+TIR+FKNLR+CGDCH+  KFISKI   +IIVRD+NRFHHF++G
Sbjct: 756 SERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNG 815

Query: 62  ACSCRDYW 39
            CSC DYW
Sbjct: 816 VCSCGDYW 823


>ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like
            [Vitis vinifera]
          Length = 891

 Score =  110 bits (276), Expect = 2e-22
 Identities = 48/68 (70%), Positives = 56/68 (82%)
 Frame = -3

Query: 242  SERLAIALGLISLPKKSTIRVFKNLRICGDCHTAAKFISKIMHCQIIVRDTNRFHHFEHG 63
            SERLAIA G+IS P KS IR+FKNLR+CGDCH A KFIS+I   +I+VRD+NRFHHF+ G
Sbjct: 824  SERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDG 883

Query: 62   ACSCRDYW 39
             CSC DYW
Sbjct: 884  ICSCGDYW 891


>emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  110 bits (276), Expect = 2e-22
 Identities = 48/68 (70%), Positives = 56/68 (82%)
 Frame = -3

Query: 242 SERLAIALGLISLPKKSTIRVFKNLRICGDCHTAAKFISKIMHCQIIVRDTNRFHHFEHG 63
           SERLAIA G+IS P KS IR+FKNLR+CGDCH A KFIS+I   +I+VRD+NRFHHF+ G
Sbjct: 591 SERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDG 650

Query: 62  ACSCRDYW 39
            CSC DYW
Sbjct: 651 ICSCGDYW 658


>emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  110 bits (276), Expect = 2e-22
 Identities = 48/68 (70%), Positives = 56/68 (82%)
 Frame = -3

Query: 242  SERLAIALGLISLPKKSTIRVFKNLRICGDCHTAAKFISKIMHCQIIVRDTNRFHHFEHG 63
            SERLAIA G+IS P KS IR+FKNLR+CGDCH A KFIS+I   +I+VRD+NRFHHF+ G
Sbjct: 824  SERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDG 883

Query: 62   ACSCRDYW 39
             CSC DYW
Sbjct: 884  ICSCGDYW 891


>gb|EXC20588.1| hypothetical protein L484_027143 [Morus notabilis]
          Length = 778

 Score =  110 bits (275), Expect = 2e-22
 Identities = 48/68 (70%), Positives = 56/68 (82%)
 Frame = -3

Query: 242 SERLAIALGLISLPKKSTIRVFKNLRICGDCHTAAKFISKIMHCQIIVRDTNRFHHFEHG 63
           SERLAIA G+IS P K+TIR+FKNLR+CGDCH A K+IS I   +IIVRD+NRFHHF+ G
Sbjct: 711 SERLAIAFGIISTPPKTTIRIFKNLRVCGDCHNATKYISTISEREIIVRDSNRFHHFKDG 770

Query: 62  ACSCRDYW 39
            CSC DYW
Sbjct: 771 TCSCGDYW 778


>ref|XP_007146392.1| hypothetical protein PHAVU_006G036400g [Phaseolus vulgaris]
           gi|561019615|gb|ESW18386.1| hypothetical protein
           PHAVU_006G036400g [Phaseolus vulgaris]
          Length = 816

 Score =  110 bits (275), Expect = 2e-22
 Identities = 49/68 (72%), Positives = 55/68 (80%)
 Frame = -3

Query: 242 SERLAIALGLISLPKKSTIRVFKNLRICGDCHTAAKFISKIMHCQIIVRDTNRFHHFEHG 63
           SER+AIA GLIS P KS IR+FKNLR+CGDCH A K+ISKI    IIVRD+NRFHHF+ G
Sbjct: 749 SERVAIAFGLISTPPKSPIRIFKNLRVCGDCHNATKYISKITERDIIVRDSNRFHHFKDG 808

Query: 62  ACSCRDYW 39
            CSC DYW
Sbjct: 809 GCSCGDYW 816


>ref|XP_004987089.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Setaria italica]
          Length = 636

 Score =  110 bits (275), Expect = 2e-22
 Identities = 47/68 (69%), Positives = 59/68 (86%)
 Frame = -3

Query: 242 SERLAIALGLISLPKKSTIRVFKNLRICGDCHTAAKFISKIMHCQIIVRDTNRFHHFEHG 63
           SERLA+A G+I+ P  + I+VFKNLRICGDCHT  KFIS+I+  +IIVRD+NRFHHF++G
Sbjct: 569 SERLAVAFGIIATPGDAPIKVFKNLRICGDCHTTIKFISRIVQREIIVRDSNRFHHFKNG 628

Query: 62  ACSCRDYW 39
           +CSCRDYW
Sbjct: 629 SCSCRDYW 636


>ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
           gi|449476583|ref|XP_004154777.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
          Length = 816

 Score =  110 bits (275), Expect = 2e-22
 Identities = 47/68 (69%), Positives = 57/68 (83%)
 Frame = -3

Query: 242 SERLAIALGLISLPKKSTIRVFKNLRICGDCHTAAKFISKIMHCQIIVRDTNRFHHFEHG 63
           SERLA+A G+IS P K+T+++FKNLR+CGDCH A KFISKI   +IIVRD+NRFHHF+ G
Sbjct: 749 SERLAMAFGIISTPPKTTLQIFKNLRVCGDCHNATKFISKITEREIIVRDSNRFHHFKDG 808

Query: 62  ACSCRDYW 39
            CSC DYW
Sbjct: 809 VCSCGDYW 816


>ref|XP_006404655.1| hypothetical protein EUTSA_v10000053mg [Eutrema salsugineum]
           gi|557105783|gb|ESQ46108.1| hypothetical protein
           EUTSA_v10000053mg [Eutrema salsugineum]
          Length = 785

 Score =  110 bits (274), Expect = 3e-22
 Identities = 48/68 (70%), Positives = 57/68 (83%)
 Frame = -3

Query: 242 SERLAIALGLISLPKKSTIRVFKNLRICGDCHTAAKFISKIMHCQIIVRDTNRFHHFEHG 63
           SE+LAIA GLIS P K+T+R+ KNLR+C DCHTA KFISK++  +IIVRDT RFHHF+ G
Sbjct: 718 SEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDG 777

Query: 62  ACSCRDYW 39
            CSCRDYW
Sbjct: 778 FCSCRDYW 785


>ref|XP_004246881.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Solanum lycopersicum]
          Length = 519

 Score =  110 bits (274), Expect = 3e-22
 Identities = 47/68 (69%), Positives = 57/68 (83%)
 Frame = -3

Query: 242 SERLAIALGLISLPKKSTIRVFKNLRICGDCHTAAKFISKIMHCQIIVRDTNRFHHFEHG 63
           SE+LAIA GLIS P++STIR+ KNLR+CGDCHT  KF+S++    IIVRD NRFHHF+ G
Sbjct: 452 SEKLAIAFGLISTPEQSTIRIMKNLRVCGDCHTFCKFVSQVTSRVIIVRDANRFHHFKEG 511

Query: 62  ACSCRDYW 39
           ACSC+DYW
Sbjct: 512 ACSCKDYW 519


>ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297324425|gb|EFH54845.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 786

 Score =  110 bits (274), Expect = 3e-22
 Identities = 48/68 (70%), Positives = 57/68 (83%)
 Frame = -3

Query: 242 SERLAIALGLISLPKKSTIRVFKNLRICGDCHTAAKFISKIMHCQIIVRDTNRFHHFEHG 63
           SE+LAIA GLIS P K+T+R+ KNLR+C DCHTA KFISK++  +IIVRDT RFHHF+ G
Sbjct: 719 SEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDG 778

Query: 62  ACSCRDYW 39
            CSCRDYW
Sbjct: 779 FCSCRDYW 786


>ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g22070 gi|4587589|gb|AAD25817.1| hypothetical protein
           [Arabidopsis thaliana] gi|330252165|gb|AEC07259.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 786

 Score =  110 bits (274), Expect = 3e-22
 Identities = 48/68 (70%), Positives = 57/68 (83%)
 Frame = -3

Query: 242 SERLAIALGLISLPKKSTIRVFKNLRICGDCHTAAKFISKIMHCQIIVRDTNRFHHFEHG 63
           SE+LAIA GLIS P K+T+R+ KNLR+C DCHTA KFISK++  +IIVRDT RFHHF+ G
Sbjct: 719 SEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDG 778

Query: 62  ACSCRDYW 39
            CSCRDYW
Sbjct: 779 FCSCRDYW 786


>ref|XP_007042438.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao] gi|508706373|gb|EOX98269.1| Tetratricopeptide
           repeat (TPR)-like superfamily protein [Theobroma cacao]
          Length = 820

 Score =  109 bits (273), Expect = 3e-22
 Identities = 49/68 (72%), Positives = 56/68 (82%)
 Frame = -3

Query: 242 SERLAIALGLISLPKKSTIRVFKNLRICGDCHTAAKFISKIMHCQIIVRDTNRFHHFEHG 63
           SERLAIA G+IS P KS IR+FKNLR+CGDCH A KFIS+I   +IIVRD+NRFHHF+ G
Sbjct: 753 SERLAIAYGIISSPPKSPIRIFKNLRVCGDCHNATKFISQITDREIIVRDSNRFHHFKDG 812

Query: 62  ACSCRDYW 39
            CSC DYW
Sbjct: 813 ICSCGDYW 820


>ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  109 bits (273), Expect = 3e-22
 Identities = 47/68 (69%), Positives = 56/68 (82%)
 Frame = -3

Query: 242 SERLAIALGLISLPKKSTIRVFKNLRICGDCHTAAKFISKIMHCQIIVRDTNRFHHFEHG 63
           SERLAIA G+IS P KS IR+FKNLR+CGDCH A KFIS+I   +I+VRD+ RFHHF++G
Sbjct: 781 SERLAIAFGIISTPPKSAIRIFKNLRVCGDCHNATKFISRITEREIVVRDSKRFHHFKNG 840

Query: 62  ACSCRDYW 39
            CSC DYW
Sbjct: 841 ICSCGDYW 848