BLASTX nr result
ID: Cocculus23_contig00035346
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00035346
(247 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266669.1| PREDICTED: pumilio homolog 5 [Vitis vinifera... 111 9e-23
ref|XP_007023664.1| Pumilio, putative isoform 5, partial [Theobr... 99 8e-19
ref|XP_007023663.1| Pumilio, putative isoform 4 [Theobroma cacao... 99 8e-19
ref|XP_007023662.1| Pumilio, putative isoform 3 [Theobroma cacao... 99 8e-19
ref|XP_007023661.1| Pumilio, putative isoform 2, partial [Theobr... 99 8e-19
ref|XP_007023660.1| Pumilio, putative isoform 1 [Theobroma cacao... 99 8e-19
ref|XP_002268751.1| PREDICTED: pumilio homolog 5 [Vitis vinifera... 97 2e-18
gb|EXC27884.1| Pumilio-5-like protein [Morus notabilis] 95 9e-18
ref|XP_006436386.1| hypothetical protein CICLE_v100306131mg [Cit... 95 9e-18
ref|XP_006436385.1| hypothetical protein CICLE_v100306131mg [Cit... 95 9e-18
ref|XP_006468093.1| PREDICTED: pumilio homolog 5-like isoform X4... 93 4e-17
ref|XP_006468090.1| PREDICTED: pumilio homolog 5-like isoform X1... 93 4e-17
ref|XP_002311896.2| hypothetical protein POPTR_0008s00490g [Popu... 91 2e-16
gb|AAF71823.1|AF153276_1 pumilio domain-containing protein PPD1 ... 91 2e-16
ref|XP_007214552.1| hypothetical protein PRUPE_ppa000898mg [Prun... 90 4e-16
ref|XP_004297891.1| PREDICTED: pumilio homolog 6, chloroplastic-... 82 1e-13
ref|XP_007014348.1| Pumilio 5, putative isoform 4, partial [Theo... 80 4e-13
ref|XP_007014347.1| Pumilio 5, putative isoform 3 [Theobroma cac... 80 4e-13
ref|XP_007014345.1| Pumilio 5, putative isoform 1 [Theobroma cac... 80 4e-13
ref|XP_004161004.1| PREDICTED: pumilio homolog 5-like [Cucumis s... 76 6e-12
>ref|XP_002266669.1| PREDICTED: pumilio homolog 5 [Vitis vinifera]
gi|297735758|emb|CBI18445.3| unnamed protein product
[Vitis vinifera]
Length = 1053
Score = 111 bits (278), Expect = 9e-23
Identities = 54/81 (66%), Positives = 60/81 (74%)
Frame = +1
Query: 1 AYFAYYCSNVNLNPRLPLPRISPEDRRLVRHIGGFGNSWKLTXXXXXXXXXXXXXQGILS 180
AYFAYYCSNVNLNPRLP P IS E++RLVRHIGGFGN+W+LT +G LS
Sbjct: 109 AYFAYYCSNVNLNPRLPPPLISRENQRLVRHIGGFGNNWRLTSFDDSGNGSLHLSRGSLS 168
Query: 181 THKEESEDDKSPRQASGDHSE 243
THKEESEDD+SPRQ S D E
Sbjct: 169 THKEESEDDRSPRQTSDDWPE 189
>ref|XP_007023664.1| Pumilio, putative isoform 5, partial [Theobroma cacao]
gi|508779030|gb|EOY26286.1| Pumilio, putative isoform 5,
partial [Theobroma cacao]
Length = 732
Score = 98.6 bits (244), Expect = 8e-19
Identities = 48/76 (63%), Positives = 53/76 (69%)
Frame = +1
Query: 1 AYFAYYCSNVNLNPRLPLPRISPEDRRLVRHIGGFGNSWKLTXXXXXXXXXXXXXQGILS 180
AYFAYY SN+NLNPRLP P IS E+RRL RHIGGFGN+W+ Q LS
Sbjct: 110 AYFAYYSSNINLNPRLPPPLISRENRRLARHIGGFGNNWRARSIDDSGSGSLMFYQSSLS 169
Query: 181 THKEESEDDKSPRQAS 228
TH EESEDD+SPRQAS
Sbjct: 170 THGEESEDDRSPRQAS 185
>ref|XP_007023663.1| Pumilio, putative isoform 4 [Theobroma cacao]
gi|508779029|gb|EOY26285.1| Pumilio, putative isoform 4
[Theobroma cacao]
Length = 865
Score = 98.6 bits (244), Expect = 8e-19
Identities = 48/76 (63%), Positives = 53/76 (69%)
Frame = +1
Query: 1 AYFAYYCSNVNLNPRLPLPRISPEDRRLVRHIGGFGNSWKLTXXXXXXXXXXXXXQGILS 180
AYFAYY SN+NLNPRLP P IS E+RRL RHIGGFGN+W+ Q LS
Sbjct: 110 AYFAYYSSNINLNPRLPPPLISRENRRLARHIGGFGNNWRARSIDDSGSGSLMFYQSSLS 169
Query: 181 THKEESEDDKSPRQAS 228
TH EESEDD+SPRQAS
Sbjct: 170 THGEESEDDRSPRQAS 185
>ref|XP_007023662.1| Pumilio, putative isoform 3 [Theobroma cacao]
gi|508779028|gb|EOY26284.1| Pumilio, putative isoform 3
[Theobroma cacao]
Length = 878
Score = 98.6 bits (244), Expect = 8e-19
Identities = 48/76 (63%), Positives = 53/76 (69%)
Frame = +1
Query: 1 AYFAYYCSNVNLNPRLPLPRISPEDRRLVRHIGGFGNSWKLTXXXXXXXXXXXXXQGILS 180
AYFAYY SN+NLNPRLP P IS E+RRL RHIGGFGN+W+ Q LS
Sbjct: 110 AYFAYYSSNINLNPRLPPPLISRENRRLARHIGGFGNNWRARSIDDSGSGSLMFYQSSLS 169
Query: 181 THKEESEDDKSPRQAS 228
TH EESEDD+SPRQAS
Sbjct: 170 THGEESEDDRSPRQAS 185
>ref|XP_007023661.1| Pumilio, putative isoform 2, partial [Theobroma cacao]
gi|508779027|gb|EOY26283.1| Pumilio, putative isoform 2,
partial [Theobroma cacao]
Length = 950
Score = 98.6 bits (244), Expect = 8e-19
Identities = 48/76 (63%), Positives = 53/76 (69%)
Frame = +1
Query: 1 AYFAYYCSNVNLNPRLPLPRISPEDRRLVRHIGGFGNSWKLTXXXXXXXXXXXXXQGILS 180
AYFAYY SN+NLNPRLP P IS E+RRL RHIGGFGN+W+ Q LS
Sbjct: 110 AYFAYYSSNINLNPRLPPPLISRENRRLARHIGGFGNNWRARSIDDSGSGSLMFYQSSLS 169
Query: 181 THKEESEDDKSPRQAS 228
TH EESEDD+SPRQAS
Sbjct: 170 THGEESEDDRSPRQAS 185
>ref|XP_007023660.1| Pumilio, putative isoform 1 [Theobroma cacao]
gi|508779026|gb|EOY26282.1| Pumilio, putative isoform 1
[Theobroma cacao]
Length = 1005
Score = 98.6 bits (244), Expect = 8e-19
Identities = 48/76 (63%), Positives = 53/76 (69%)
Frame = +1
Query: 1 AYFAYYCSNVNLNPRLPLPRISPEDRRLVRHIGGFGNSWKLTXXXXXXXXXXXXXQGILS 180
AYFAYY SN+NLNPRLP P IS E+RRL RHIGGFGN+W+ Q LS
Sbjct: 110 AYFAYYSSNINLNPRLPPPLISRENRRLARHIGGFGNNWRARSIDDSGSGSLMFYQSSLS 169
Query: 181 THKEESEDDKSPRQAS 228
TH EESEDD+SPRQAS
Sbjct: 170 THGEESEDDRSPRQAS 185
>ref|XP_002268751.1| PREDICTED: pumilio homolog 5 [Vitis vinifera]
gi|296089553|emb|CBI39372.3| unnamed protein product
[Vitis vinifera]
Length = 1017
Score = 97.4 bits (241), Expect = 2e-18
Identities = 49/82 (59%), Positives = 56/82 (68%)
Frame = +1
Query: 1 AYFAYYCSNVNLNPRLPLPRISPEDRRLVRHIGGFGNSWKLTXXXXXXXXXXXXXQGILS 180
AY AYYCS +NLNPRLP P IS E+RRLVRHIG FGNS LT QG LS
Sbjct: 108 AYLAYYCSKINLNPRLPPPLISWENRRLVRHIGSFGNSRGLTSLDDSGGRSLRLSQGTLS 167
Query: 181 THKEESEDDKSPRQASGDHSER 246
THKEESEDD+SP++ S D ++
Sbjct: 168 THKEESEDDRSPQKPSDDWEDQ 189
>gb|EXC27884.1| Pumilio-5-like protein [Morus notabilis]
Length = 901
Score = 95.1 bits (235), Expect = 9e-18
Identities = 47/76 (61%), Positives = 53/76 (69%)
Frame = +1
Query: 1 AYFAYYCSNVNLNPRLPLPRISPEDRRLVRHIGGFGNSWKLTXXXXXXXXXXXXXQGILS 180
AY +YYCSNVNLNPRLP P IS E+RRLVRHIG FGN+W LT QG L
Sbjct: 108 AYLSYYCSNVNLNPRLPPPLISWENRRLVRHIGSFGNNWGLTSVDDSGNVSLHFSQGSLP 167
Query: 181 THKEESEDDKSPRQAS 228
THKEESED++S +Q S
Sbjct: 168 THKEESEDEQSSQQPS 183
>ref|XP_006436386.1| hypothetical protein CICLE_v100306131mg [Citrus clementina]
gi|557538582|gb|ESR49626.1| hypothetical protein
CICLE_v100306131mg [Citrus clementina]
Length = 1014
Score = 95.1 bits (235), Expect = 9e-18
Identities = 46/81 (56%), Positives = 57/81 (70%)
Frame = +1
Query: 1 AYFAYYCSNVNLNPRLPLPRISPEDRRLVRHIGGFGNSWKLTXXXXXXXXXXXXXQGILS 180
AYFAYYCSNVNLNPRLP P +S E+RRLVRH+G G++W+ T + LS
Sbjct: 110 AYFAYYCSNVNLNPRLPPPLMSRENRRLVRHMGSSGSNWRSTSVDDAGNGTLHLSRSSLS 169
Query: 181 THKEESEDDKSPRQASGDHSE 243
TH+EE E+D+SPRQAS + SE
Sbjct: 170 THEEEPEEDRSPRQASDNLSE 190
>ref|XP_006436385.1| hypothetical protein CICLE_v100306131mg [Citrus clementina]
gi|567887730|ref|XP_006436387.1| hypothetical protein
CICLE_v100306131mg [Citrus clementina]
gi|557538581|gb|ESR49625.1| hypothetical protein
CICLE_v100306131mg [Citrus clementina]
gi|557538583|gb|ESR49627.1| hypothetical protein
CICLE_v100306131mg [Citrus clementina]
Length = 1019
Score = 95.1 bits (235), Expect = 9e-18
Identities = 46/81 (56%), Positives = 57/81 (70%)
Frame = +1
Query: 1 AYFAYYCSNVNLNPRLPLPRISPEDRRLVRHIGGFGNSWKLTXXXXXXXXXXXXXQGILS 180
AYFAYYCSNVNLNPRLP P +S E+RRLVRH+G G++W+ T + LS
Sbjct: 110 AYFAYYCSNVNLNPRLPPPLMSRENRRLVRHMGSSGSNWRSTSVDDAGNGTLHLSRSSLS 169
Query: 181 THKEESEDDKSPRQASGDHSE 243
TH+EE E+D+SPRQAS + SE
Sbjct: 170 THEEEPEEDRSPRQASDNLSE 190
>ref|XP_006468093.1| PREDICTED: pumilio homolog 5-like isoform X4 [Citrus sinensis]
Length = 1014
Score = 92.8 bits (229), Expect = 4e-17
Identities = 45/81 (55%), Positives = 56/81 (69%)
Frame = +1
Query: 1 AYFAYYCSNVNLNPRLPLPRISPEDRRLVRHIGGFGNSWKLTXXXXXXXXXXXXXQGILS 180
AYFAYYCSNVNLNPRLP P +S E+RRLVRH+G G++W+ + LS
Sbjct: 110 AYFAYYCSNVNLNPRLPPPLMSRENRRLVRHMGSSGSNWRSNSVDDVGNGTLHLSRSSLS 169
Query: 181 THKEESEDDKSPRQASGDHSE 243
TH+EE E+D+SPRQAS + SE
Sbjct: 170 THEEEPEEDRSPRQASENLSE 190
>ref|XP_006468090.1| PREDICTED: pumilio homolog 5-like isoform X1 [Citrus sinensis]
gi|568827490|ref|XP_006468091.1| PREDICTED: pumilio
homolog 5-like isoform X2 [Citrus sinensis]
gi|568827492|ref|XP_006468092.1| PREDICTED: pumilio
homolog 5-like isoform X3 [Citrus sinensis]
Length = 1019
Score = 92.8 bits (229), Expect = 4e-17
Identities = 45/81 (55%), Positives = 56/81 (69%)
Frame = +1
Query: 1 AYFAYYCSNVNLNPRLPLPRISPEDRRLVRHIGGFGNSWKLTXXXXXXXXXXXXXQGILS 180
AYFAYYCSNVNLNPRLP P +S E+RRLVRH+G G++W+ + LS
Sbjct: 110 AYFAYYCSNVNLNPRLPPPLMSRENRRLVRHMGSSGSNWRSNSVDDVGNGTLHLSRSSLS 169
Query: 181 THKEESEDDKSPRQASGDHSE 243
TH+EE E+D+SPRQAS + SE
Sbjct: 170 THEEEPEEDRSPRQASENLSE 190
>ref|XP_002311896.2| hypothetical protein POPTR_0008s00490g [Populus trichocarpa]
gi|550332073|gb|EEE89263.2| hypothetical protein
POPTR_0008s00490g [Populus trichocarpa]
Length = 992
Score = 90.5 bits (223), Expect = 2e-16
Identities = 45/76 (59%), Positives = 52/76 (68%)
Frame = +1
Query: 1 AYFAYYCSNVNLNPRLPLPRISPEDRRLVRHIGGFGNSWKLTXXXXXXXXXXXXXQGILS 180
AYFAYYCSNVNLNPRLP P +S E+RRLV HIGGFGN+W+ + LS
Sbjct: 110 AYFAYYCSNVNLNPRLPPPLLSRENRRLVHHIGGFGNNWR----PESGNGSLQLPKSSLS 165
Query: 181 THKEESEDDKSPRQAS 228
THKEE +D+SPR AS
Sbjct: 166 THKEEPNEDRSPRGAS 181
>gb|AAF71823.1|AF153276_1 pumilio domain-containing protein PPD1 [Populus tremula x Populus
tremuloides]
Length = 966
Score = 90.5 bits (223), Expect = 2e-16
Identities = 45/76 (59%), Positives = 52/76 (68%)
Frame = +1
Query: 1 AYFAYYCSNVNLNPRLPLPRISPEDRRLVRHIGGFGNSWKLTXXXXXXXXXXXXXQGILS 180
AYFAYYCSNVNLNPRLP P +S E+RRLV HIGGFGN+W+ + LS
Sbjct: 110 AYFAYYCSNVNLNPRLPPPLLSRENRRLVHHIGGFGNNWR----PESGNGSLQLPKSSLS 165
Query: 181 THKEESEDDKSPRQAS 228
THKEE +D+SPR AS
Sbjct: 166 THKEEPNEDRSPRGAS 181
>ref|XP_007214552.1| hypothetical protein PRUPE_ppa000898mg [Prunus persica]
gi|462410417|gb|EMJ15751.1| hypothetical protein
PRUPE_ppa000898mg [Prunus persica]
Length = 967
Score = 89.7 bits (221), Expect = 4e-16
Identities = 46/78 (58%), Positives = 51/78 (65%)
Frame = +1
Query: 1 AYFAYYCSNVNLNPRLPLPRISPEDRRLVRHIGGFGNSWKLTXXXXXXXXXXXXXQGILS 180
AY AYYC+NVNLNPRLP P IS E+RRLVRHIG F +W QG L
Sbjct: 108 AYLAYYCANVNLNPRLPPPLISWENRRLVRHIGSFSQNW--GPVDDSGNAPLHVSQGSLP 165
Query: 181 THKEESEDDKSPRQASGD 234
THKEESEDD+SP+Q S D
Sbjct: 166 THKEESEDDQSPKQVSSD 183
>ref|XP_004297891.1| PREDICTED: pumilio homolog 6, chloroplastic-like [Fragaria vesca
subsp. vesca]
Length = 955
Score = 81.6 bits (200), Expect = 1e-13
Identities = 44/78 (56%), Positives = 50/78 (64%)
Frame = +1
Query: 1 AYFAYYCSNVNLNPRLPLPRISPEDRRLVRHIGGFGNSWKLTXXXXXXXXXXXXXQGILS 180
AY AYYC+NVNLNPRLP P IS E+RRL RHIG F S L G+L
Sbjct: 108 AYLAYYCANVNLNPRLPPPLISWENRRLARHIGSF--SPNLGPVEDSGNGSLHMSPGLLP 165
Query: 181 THKEESEDDKSPRQASGD 234
TH+EESEDD++P QAS D
Sbjct: 166 THQEESEDDQTPPQASND 183
>ref|XP_007014348.1| Pumilio 5, putative isoform 4, partial [Theobroma cacao]
gi|508784711|gb|EOY31967.1| Pumilio 5, putative isoform
4, partial [Theobroma cacao]
Length = 843
Score = 79.7 bits (195), Expect = 4e-13
Identities = 42/78 (53%), Positives = 49/78 (62%)
Frame = +1
Query: 1 AYFAYYCSNVNLNPRLPLPRISPEDRRLVRHIGGFGNSWKLTXXXXXXXXXXXXXQGILS 180
AY AYYCSNVNLNPRLP P IS ++ L IG FGN+ L+ +G LS
Sbjct: 108 AYIAYYCSNVNLNPRLPPPLISWRNQHLKCQIGRFGNNQVLSSIDDSGNTFLHFSKGSLS 167
Query: 181 THKEESEDDKSPRQASGD 234
THKE EDD+SPRQ+S D
Sbjct: 168 THKEVPEDDQSPRQSSDD 185
>ref|XP_007014347.1| Pumilio 5, putative isoform 3 [Theobroma cacao]
gi|508784710|gb|EOY31966.1| Pumilio 5, putative isoform
3 [Theobroma cacao]
Length = 1029
Score = 79.7 bits (195), Expect = 4e-13
Identities = 42/78 (53%), Positives = 49/78 (62%)
Frame = +1
Query: 1 AYFAYYCSNVNLNPRLPLPRISPEDRRLVRHIGGFGNSWKLTXXXXXXXXXXXXXQGILS 180
AY AYYCSNVNLNPRLP P IS ++ L IG FGN+ L+ +G LS
Sbjct: 108 AYIAYYCSNVNLNPRLPPPLISWRNQHLKCQIGRFGNNQVLSSIDDSGNTFLHFSKGSLS 167
Query: 181 THKEESEDDKSPRQASGD 234
THKE EDD+SPRQ+S D
Sbjct: 168 THKEVPEDDQSPRQSSDD 185
>ref|XP_007014345.1| Pumilio 5, putative isoform 1 [Theobroma cacao]
gi|590581436|ref|XP_007014346.1| Pumilio 5, putative
isoform 1 [Theobroma cacao] gi|508784708|gb|EOY31964.1|
Pumilio 5, putative isoform 1 [Theobroma cacao]
gi|508784709|gb|EOY31965.1| Pumilio 5, putative isoform
1 [Theobroma cacao]
Length = 1013
Score = 79.7 bits (195), Expect = 4e-13
Identities = 42/78 (53%), Positives = 49/78 (62%)
Frame = +1
Query: 1 AYFAYYCSNVNLNPRLPLPRISPEDRRLVRHIGGFGNSWKLTXXXXXXXXXXXXXQGILS 180
AY AYYCSNVNLNPRLP P IS ++ L IG FGN+ L+ +G LS
Sbjct: 108 AYIAYYCSNVNLNPRLPPPLISWRNQHLKCQIGRFGNNQVLSSIDDSGNTFLHFSKGSLS 167
Query: 181 THKEESEDDKSPRQASGD 234
THKE EDD+SPRQ+S D
Sbjct: 168 THKEVPEDDQSPRQSSDD 185
>ref|XP_004161004.1| PREDICTED: pumilio homolog 5-like [Cucumis sativus]
Length = 1031
Score = 75.9 bits (185), Expect = 6e-12
Identities = 37/70 (52%), Positives = 47/70 (67%)
Frame = +1
Query: 1 AYFAYYCSNVNLNPRLPLPRISPEDRRLVRHIGGFGNSWKLTXXXXXXXXXXXXXQGILS 180
AYF YY +NVNLNPRLP P IS E+RRLVRHIGG G + +L+ +G LS
Sbjct: 110 AYFEYYWANVNLNPRLPPPLISRENRRLVRHIGGLGKNRRLSSTDDTASELLHVSKGSLS 169
Query: 181 THKEESEDDK 210
TH+EE+ +D+
Sbjct: 170 THQEETSEDR 179