BLASTX nr result
ID: Cocculus23_contig00035305
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00035305
(548 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFB73911.1| polyprotein [Citrus sinensis] 239 3e-61
gb|AFB73912.1| polyprotein [Citrus sinensis] 236 3e-60
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 213 2e-53
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 211 7e-53
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 211 9e-53
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 211 9e-53
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 210 2e-52
ref|XP_006484589.1| PREDICTED: uncharacterized protein LOC102625... 203 3e-50
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas] 179 4e-43
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 73 5e-11
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 72 1e-10
emb|CAN71828.1| hypothetical protein VITISV_020654 [Vitis vinifera] 70 3e-10
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 70 3e-10
emb|CBG76256.1| OO_Ba0005L10-OO_Ba0081K17.7 [Oryza officinalis] 70 3e-10
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 70 4e-10
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 70 4e-10
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 69 6e-10
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 68 1e-09
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 68 1e-09
gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subc... 68 2e-09
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 239 bits (610), Expect = 3e-61
Identities = 119/175 (68%), Positives = 139/175 (79%)
Frame = -2
Query: 526 LVFNDIAATVLEEESRRKNREDRSMSAQQAEALTMTRGRSTERGPSGRQHQXXXXXXXXX 347
LVF+D+AA+VL EESRRKN+E+R S+QQAEAL++TRGRSTERGPSG Q+Q
Sbjct: 167 LVFDDVAASVLNEESRRKNKENRQASSQQAEALSVTRGRSTERGPSGSQNQGRSKFRGKK 226
Query: 346 NVXXXXXXXXXXXKSECWFNKKNVEKGKAPESSNSQGCVASTSDDGEVFYSEVATVTEGR 167
NV K ECW N+K E GK PE+SN+QGCVASTSDDGE+ YSE TV+EGR
Sbjct: 227 NVKCYNCGKKGHVKKECWSNQKRRE-GKEPETSNAQGCVASTSDDGEILYSEATTVSEGR 285
Query: 166 KRLAEVWFVDSAATWHMTSRREWFHEYEPISGGSVFLGNDHALKIAGIGTIKIKM 2
KRL++VW +DS ATWHMTSRREWFH YEPISGGSV++GNDHAL+IAGIGTIKIKM
Sbjct: 286 KRLSDVWLIDSGATWHMTSRREWFHTYEPISGGSVYMGNDHALEIAGIGTIKIKM 340
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 236 bits (602), Expect = 3e-60
Identities = 118/175 (67%), Positives = 137/175 (78%)
Frame = -2
Query: 526 LVFNDIAATVLEEESRRKNREDRSMSAQQAEALTMTRGRSTERGPSGRQHQXXXXXXXXX 347
LVF+D+AA+VL EESRRKN+E+R S+QQAEAL++TRGRSTERGPSG Q+
Sbjct: 167 LVFDDVAASVLNEESRRKNKENRQASSQQAEALSVTRGRSTERGPSGSQNHGRSKSRSKK 226
Query: 346 NVXXXXXXXXXXXKSECWFNKKNVEKGKAPESSNSQGCVASTSDDGEVFYSEVATVTEGR 167
NV K ECW N+K E GK PESSN+QGCVASTSDDGE+ YSE V+EGR
Sbjct: 227 NVKCYNCGKKGHVKKECWSNQKRRE-GKEPESSNAQGCVASTSDDGEILYSEATIVSEGR 285
Query: 166 KRLAEVWFVDSAATWHMTSRREWFHEYEPISGGSVFLGNDHALKIAGIGTIKIKM 2
KRL++VW +DS ATWHMTSRREWFH YEPISGGSV++GNDHAL+IAGIGTIKIKM
Sbjct: 286 KRLSDVWLIDSGATWHMTSRREWFHTYEPISGGSVYMGNDHALEIAGIGTIKIKM 340
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 213 bits (543), Expect = 2e-53
Identities = 105/175 (60%), Positives = 130/175 (74%)
Frame = -2
Query: 526 LVFNDIAATVLEEESRRKNREDRSMSAQQAEALTMTRGRSTERGPSGRQHQXXXXXXXXX 347
L F+D+A +LEEESRRKN+E+RS S++QAEALTMTRGRSTERGPSG Q+
Sbjct: 167 LHFDDVAGAILEEESRRKNKEERSESSKQAEALTMTRGRSTERGPSGSQNHGRSKSRRKN 226
Query: 346 NVXXXXXXXXXXXKSECWFNKKNVEKGKAPESSNSQGCVASTSDDGEVFYSEVATVTEGR 167
N+ K ECW NKKN EK E++ SQGCVASTSDDGE+ YSE AT +EG
Sbjct: 227 NIKCYGCGMKGHVKKECWNNKKNGEKNS--EATTSQGCVASTSDDGEILYSEAATSSEGE 284
Query: 166 KRLAEVWFVDSAATWHMTSRREWFHEYEPISGGSVFLGNDHALKIAGIGTIKIKM 2
++L +VW +DS ATWHMT R+WF+ YEPIS GSV++GNDHAL+IAG+GTI++KM
Sbjct: 285 RQLNDVWIMDSGATWHMTPHRDWFYSYEPISEGSVYMGNDHALEIAGVGTIRLKM 339
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 211 bits (538), Expect = 7e-53
Identities = 106/178 (59%), Positives = 129/178 (72%)
Frame = -2
Query: 535 TTVLVFNDIAATVLEEESRRKNREDRSMSAQQAEALTMTRGRSTERGPSGRQHQXXXXXX 356
T L F+D+A +LEEESRRKN+E+RS S++QAEALTMTRGRSTERGPSG Q+
Sbjct: 164 TDTLHFDDVAGAILEEESRRKNKEERSESSKQAEALTMTRGRSTERGPSGSQNHGRSKSR 223
Query: 355 XXXNVXXXXXXXXXXXKSECWFNKKNVEKGKAPESSNSQGCVASTSDDGEVFYSEVATVT 176
N+ K ECW KKN EK E+S SQGCVASTSDDGE+ YSE AT +
Sbjct: 224 RKKNIKCYGCGMKGHVKKECWNIKKNGEKNS--EASTSQGCVASTSDDGEILYSEAATSS 281
Query: 175 EGRKRLAEVWFVDSAATWHMTSRREWFHEYEPISGGSVFLGNDHALKIAGIGTIKIKM 2
+G +RL +VW +DS ATWHMT R+WF YEPIS GSV++GNDHAL+IAG+GTI++KM
Sbjct: 282 KGERRLNDVWIMDSGATWHMTPHRDWFFSYEPISEGSVYMGNDHALEIAGVGTIRLKM 339
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 211 bits (537), Expect = 9e-53
Identities = 106/175 (60%), Positives = 126/175 (72%)
Frame = -2
Query: 526 LVFNDIAATVLEEESRRKNREDRSMSAQQAEALTMTRGRSTERGPSGRQHQXXXXXXXXX 347
L FND+A +LEEESRRKN+EDR S++Q EALT+TRGRSTERGPSG Q+
Sbjct: 167 LSFNDVAGAILEEESRRKNKEDRQDSSKQMEALTVTRGRSTERGPSGSQNHGRSTSRRKT 226
Query: 346 NVXXXXXXXXXXXKSECWFNKKNVEKGKAPESSNSQGCVASTSDDGEVFYSEVATVTEGR 167
N+ K +CW NKK+ EK E+S SQGCVASTSDDGEV YSE A T+G+
Sbjct: 227 NLKCYNCGKRGHLKKDCWSNKKSGEKSS--EASTSQGCVASTSDDGEVLYSEAAVSTKGK 284
Query: 166 KRLAEVWFVDSAATWHMTSRREWFHEYEPISGGSVFLGNDHALKIAGIGTIKIKM 2
RL +VW VDS ATWHMT RR+WF YEP+S G+VF+GNDHAL+I GIGT+KIKM
Sbjct: 285 NRLTDVWIVDSGATWHMTPRRDWFCTYEPVSEGNVFMGNDHALEIVGIGTVKIKM 339
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 211 bits (537), Expect = 9e-53
Identities = 105/175 (60%), Positives = 129/175 (73%)
Frame = -2
Query: 526 LVFNDIAATVLEEESRRKNREDRSMSAQQAEALTMTRGRSTERGPSGRQHQXXXXXXXXX 347
L F+D+A +LEEESRRKN+E+RS S++QAEALTMTRGRSTERGPSG Q+
Sbjct: 167 LHFDDVAGAILEEESRRKNKEERSESSKQAEALTMTRGRSTERGPSGSQNHGRSKSRRKK 226
Query: 346 NVXXXXXXXXXXXKSECWFNKKNVEKGKAPESSNSQGCVASTSDDGEVFYSEVATVTEGR 167
N+ K ECW KKN EK E+S SQGCVASTSDDGE+ YSE AT ++G
Sbjct: 227 NIKCYGCGMKGHVKKECWNIKKNGEKNS--EASTSQGCVASTSDDGEILYSEAATSSKGE 284
Query: 166 KRLAEVWFVDSAATWHMTSRREWFHEYEPISGGSVFLGNDHALKIAGIGTIKIKM 2
+RL +VW +DS ATWHMT R+WF+ YEPIS GSV++GNDHAL+IAG+GTI++KM
Sbjct: 285 RRLNDVWIMDSGATWHMTPHRDWFYSYEPISEGSVYMGNDHALEIAGVGTIRLKM 339
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 210 bits (534), Expect = 2e-52
Identities = 105/175 (60%), Positives = 128/175 (73%)
Frame = -2
Query: 526 LVFNDIAATVLEEESRRKNREDRSMSAQQAEALTMTRGRSTERGPSGRQHQXXXXXXXXX 347
L F+D+A +LEEESRRKN+E+RS S++QAEALTMTRGRSTERGPSG Q+
Sbjct: 167 LHFDDVAGAILEEESRRKNKEERSESSKQAEALTMTRGRSTERGPSGSQNHGRSKSRRKK 226
Query: 346 NVXXXXXXXXXXXKSECWFNKKNVEKGKAPESSNSQGCVASTSDDGEVFYSEVATVTEGR 167
N+ K ECW KKN EK E+S SQGCVASTSDDGE+ YSE AT ++G
Sbjct: 227 NIKCYGCGMKGHVKKECWNIKKNGEKNS--EASTSQGCVASTSDDGEILYSEAATSSKGE 284
Query: 166 KRLAEVWFVDSAATWHMTSRREWFHEYEPISGGSVFLGNDHALKIAGIGTIKIKM 2
+RL +VW +DS ATWHMT R+WF YEPIS GSV++GNDHAL+IAG+GTI++KM
Sbjct: 285 RRLNDVWIMDSGATWHMTPHRDWFFSYEPISEGSVYMGNDHALEIAGVGTIRLKM 339
>ref|XP_006484589.1| PREDICTED: uncharacterized protein LOC102625372 [Citrus sinensis]
Length = 1258
Score = 203 bits (516), Expect = 3e-50
Identities = 103/172 (59%), Positives = 124/172 (72%)
Frame = -2
Query: 544 GVQTTVLVFNDIAATVLEEESRRKNREDRSMSAQQAEALTMTRGRSTERGPSGRQHQXXX 365
GV+ N A+VL EESRRKN+E+ S+QQA+AL++TRGRSTERGPSG Q+Q
Sbjct: 24 GVEYEARAENLFGASVLNEESRRKNKENIQASSQQAKALSVTRGRSTERGPSGNQNQGRS 83
Query: 364 XXXXXXNVXXXXXXXXXXXKSECWFNKKNVEKGKAPESSNSQGCVASTSDDGEVFYSEVA 185
NV K ECW N+K E GK PESSN+QGCVASTSDDGE+ YSE
Sbjct: 84 KFRSKKNVKCYKCGKKGHVKKECWSNQKRKE-GKEPESSNAQGCVASTSDDGEILYSEAT 142
Query: 184 TVTEGRKRLAEVWFVDSAATWHMTSRREWFHEYEPISGGSVFLGNDHALKIA 29
TV+EGRKRL++VW +DS TWHMT +REWFH YEPISGGSV++G+DHAL+IA
Sbjct: 143 TVSEGRKRLSDVWLIDSGDTWHMTYQREWFHTYEPISGGSVYMGDDHALEIA 194
Score = 181 bits (458), Expect = 1e-43
Identities = 89/141 (63%), Positives = 106/141 (75%)
Frame = -2
Query: 451 SAQQAEALTMTRGRSTERGPSGRQHQXXXXXXXXXNVXXXXXXXXXXXKSECWFNKKNVE 272
S+QQA+AL++TRGRSTERGPSG Q+Q NV K ECW N+K E
Sbjct: 392 SSQQAKALSVTRGRSTERGPSGNQNQGRSKFRSKKNVKCYKCGKKGHVKKECWSNQKRKE 451
Query: 271 KGKAPESSNSQGCVASTSDDGEVFYSEVATVTEGRKRLAEVWFVDSAATWHMTSRREWFH 92
GK PESSN+QGCVASTSDDGE+ YSE TV+EGRKRL++VW +DS TWHMT +REWFH
Sbjct: 452 -GKEPESSNAQGCVASTSDDGEILYSEATTVSEGRKRLSDVWLIDSGDTWHMTYQREWFH 510
Query: 91 EYEPISGGSVFLGNDHALKIA 29
YEPISGGSV++G+DHAL+IA
Sbjct: 511 TYEPISGGSVYMGDDHALEIA 531
>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
Length = 1298
Score = 179 bits (454), Expect = 4e-43
Identities = 95/182 (52%), Positives = 118/182 (64%)
Frame = -2
Query: 547 NGVQTTVLVFNDIAATVLEEESRRKNREDRSMSAQQAEALTMTRGRSTERGPSGRQHQXX 368
N + T LVF+D+AA VLEEESRRKN+EDR ++ QQAEALT+ RGRSTERG S + +
Sbjct: 161 NNILTDYLVFDDVAAAVLEEESRRKNKEDRQVNLQQAEALTVMRGRSTERGQSSGRGRSK 220
Query: 367 XXXXXXXNVXXXXXXXXXXXKSECWFNKKNVEKGKAPESSNSQGCVASTSDDGEVFYSEV 188
+ K +CW ++SN QG VASTSDDG E
Sbjct: 221 SSKKN---LTCYNCGKKGHLKKDCW---------NLAQNSNPQGNVASTSDDGSALCCEA 268
Query: 187 ATVTEGRKRLAEVWFVDSAATWHMTSRREWFHEYEPISGGSVFLGNDHALKIAGIGTIKI 8
+ EGRKR A++W +DS AT+HMTSR+EWFH YEPISGGSV+ +DHAL+I GIGTIK+
Sbjct: 269 SIAREGRKRFADIWLIDSGATYHMTSRKEWFHHYEPISGGSVYSCDDHALEIIGIGTIKL 328
Query: 7 KM 2
KM
Sbjct: 329 KM 330
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 72.8 bits (177), Expect = 5e-11
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
Frame = -2
Query: 304 SECWF-------NKKNVEKGKAPESSNSQGCVASTSDDGEVFYSEVATVTEGRKRLAEVW 146
SECW +K + KGK E + SD +E+ G + ++ W
Sbjct: 156 SECWKLQDKDKRTRKYIPKGKKEEEGKAAVVTDEKSD------AELLVAYAGCAQTSDQW 209
Query: 145 FVDSAATWHMTSRREWFHEYEPISGGSVFLGNDHALKIAGIGTIKIKM 2
+D+A T+HM R+WF YE + GG+V +G+D ++AGIGT++IKM
Sbjct: 210 ILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGTVQIKM 257
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 71.6 bits (174), Expect = 1e-10
Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Frame = -2
Query: 304 SECW-FNKKNVEKG--KAPESSNSQGCVASTSDDGEVFYSEVATVTEGRKRLAEVWFVDS 134
S+CW K KG K QG A +D+ +E+ G + ++ W +D+
Sbjct: 189 SDCWKLQNKEKHKGNYKPKGKQEEQGKAAVATDNKPD--AELLVAYAGCVQTSDEWLLDT 246
Query: 133 AATWHMTSRREWFHEYEPISGGSVFLGNDHALKIAGIGTIKIKM 2
T+HM R+WF YEP+ GG+V +G++ K+AG+GTI+IKM
Sbjct: 247 GCTYHMCPNRDWFTTYEPVQGGNVLMGDNTPCKVAGVGTIQIKM 290
>emb|CAN71828.1| hypothetical protein VITISV_020654 [Vitis vinifera]
Length = 281
Score = 70.5 bits (171), Expect = 3e-10
Identities = 34/91 (37%), Positives = 51/91 (56%)
Frame = -2
Query: 274 EKGKAPESSNSQGCVASTSDDGEVFYSEVATVTEGRKRLAEVWFVDSAATWHMTSRREWF 95
+KGK PE S+ +DGE+ V++G + E W +DS+ +HM R+WF
Sbjct: 70 QKGKQPEKSDEASATEGKYNDGELLI-----VSDGNSKPCEDWILDSSCMFHMCLNRDWF 124
Query: 94 HEYEPISGGSVFLGNDHALKIAGIGTIKIKM 2
YE + G V +GN+ + KIA GT++IKM
Sbjct: 125 STYETVFKGVVLMGNNASCKIASNGTVRIKM 155
>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1138
Score = 70.1 bits (170), Expect = 3e-10
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 7/108 (6%)
Frame = -2
Query: 304 SECWF-------NKKNVEKGKAPESSNSQGCVASTSDDGEVFYSEVATVTEGRKRLAEVW 146
SECW +K + KGK E + SD +E+ G + ++ W
Sbjct: 189 SECWKLQDKDKRTRKYIPKGKKEEEGKAAIVTDEKSD------AELLVAYAGCAQTSDQW 242
Query: 145 FVDSAATWHMTSRREWFHEYEPISGGSVFLGNDHALKIAGIGTIKIKM 2
+D+A T+HM R+WF YE + GG+V +G+D ++AGIG ++IKM
Sbjct: 243 ILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGIVQIKM 290
>emb|CBG76256.1| OO_Ba0005L10-OO_Ba0081K17.7 [Oryza officinalis]
Length = 565
Score = 70.1 bits (170), Expect = 3e-10
Identities = 51/174 (29%), Positives = 77/174 (44%), Gaps = 9/174 (5%)
Frame = -2
Query: 496 LEEESRRKNREDRSMSAQQAEALTMTRGRSTERGPSGRQHQXXXXXXXXXNVXXXXXXXX 317
L + + KN S+ QAE L + RGR E+ + +
Sbjct: 103 LHAKEKMKNMVPSESSSSQAEGLAV-RGRQQEKNTKNQSRDKSSSSYRRRSKSKGRYKSC 161
Query: 316 XXXK------SECWF--NK-KNVEKGKAPESSNSQGCVASTSDDGEVFYSEVATVTEGRK 164
K SECW NK K E K + +G +DD +E+ G
Sbjct: 162 KYCKGGRHDISECWKLQNKDKRTESYKPKGNKEEEGKAVIVTDDKSG--AELLVAYVGCA 219
Query: 163 RLAEVWFVDSAATWHMTSRREWFHEYEPISGGSVFLGNDHALKIAGIGTIKIKM 2
+ ++ W +D+A T+HM R+WF YE + GG+V +G++ K+ GIGTI+IKM
Sbjct: 220 QTSDQWILDTACTYHMCPNRDWFVTYEFVQGGTVLMGDNTLCKVVGIGTIQIKM 273
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 69.7 bits (169), Expect = 4e-10
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
Frame = -2
Query: 304 SECWFNK-------KNVEKGKAPESSNSQGCVASTSDDGEVFYSEVATVTEGRKRLAEVW 146
SECW + K + KGK E + SD +E+ G + ++ W
Sbjct: 282 SECWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSD------TELLVAYAGCAQTSDQW 335
Query: 145 FVDSAATWHMTSRREWFHEYEPISGGSVFLGNDHALKIAGIGTIKIKM 2
+D+A T+HM R+WF YE + GG+V +G+D ++AGIGT++IKM
Sbjct: 336 ILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKM 383
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 69.7 bits (169), Expect = 4e-10
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
Frame = -2
Query: 304 SECWFNK-------KNVEKGKAPESSNSQGCVASTSDDGEVFYSEVATVTEGRKRLAEVW 146
SECW + K + KGK E + SD +E+ G + ++ W
Sbjct: 282 SECWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSD------TELLVAYAGCAQTSDQW 335
Query: 145 FVDSAATWHMTSRREWFHEYEPISGGSVFLGNDHALKIAGIGTIKIKM 2
+D+A T+HM R+WF YE + GG+V +G+D ++AGIGT++IKM
Sbjct: 336 ILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKM 383
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 69.3 bits (168), Expect = 6e-10
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
Frame = -2
Query: 304 SECWFNK-------KNVEKGKAPESSNSQGCVASTSDDGEVFYSEVATVTEGRKRLAEVW 146
S+CW + K + KGK E + SD +E+ G + ++ W
Sbjct: 247 SKCWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSD------AELLVAYAGCAQTSDQW 300
Query: 145 FVDSAATWHMTSRREWFHEYEPISGGSVFLGNDHALKIAGIGTIKIKM 2
+D+A T+HM R+WF YE + GG+V +G+D ++AGIGT++IKM
Sbjct: 301 ILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKM 348
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 68.2 bits (165), Expect = 1e-09
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
Frame = -2
Query: 304 SECWFNK-------KNVEKGKAPESSNSQGCVASTSDDGEVFYSEVATVTEGRKRLAEVW 146
S+CW + K + KGK + + SD +E+ G + ++ W
Sbjct: 64 SKCWKLQDKDKRTGKYIPKGKKEDEGKAAVVTDEKSD------AELLVAYAGCAQTSDQW 117
Query: 145 FVDSAATWHMTSRREWFHEYEPISGGSVFLGNDHALKIAGIGTIKIKM 2
+D+A T+HM R+WF YE + GG+V +G+D ++AGIGT++IKM
Sbjct: 118 ILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKM 165
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 68.2 bits (165), Expect = 1e-09
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
Frame = -2
Query: 304 SECWFNK-------KNVEKGKAPESSNSQGCVASTSDDGEVFYSEVATVTEGRKRLAEVW 146
S+CW + K + KGK + + SD +E+ G + ++ W
Sbjct: 232 SKCWKLQDKDKRTGKYIPKGKKEDEGKAAVVTDEKSD------AELLVAYAGCAQTSDQW 285
Query: 145 FVDSAATWHMTSRREWFHEYEPISGGSVFLGNDHALKIAGIGTIKIKM 2
+D+A T+HM R+WF YE + GG+V +G+D ++AGIGT++IKM
Sbjct: 286 ILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKM 333
>gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 424
Score = 67.8 bits (164), Expect = 2e-09
Identities = 45/171 (26%), Positives = 82/171 (47%)
Frame = -2
Query: 514 DIAATVLEEESRRKNREDRSMSAQQAEALTMTRGRSTERGPSGRQHQXXXXXXXXXNVXX 335
+I +++L + RR ++++ +M A QAE+L + E G S + +
Sbjct: 174 EIISSLLARDLRR-SKKNEAMEASQAESLLVKAKHDHEAGVSKSKEKG---------ARC 223
Query: 334 XXXXXXXXXKSECWFNKKNVEKGKAPESSNSQGCVASTSDDGEVFYSEVATVTEGRKRLA 155
+ C KK + +A+ DD + E+ TV+ ++
Sbjct: 224 YKCHEFGHIRRNCPLLKKR---------KDGIASLAARGDDSDSSSHEILTVSN--EKSG 272
Query: 154 EVWFVDSAATWHMTSRREWFHEYEPISGGSVFLGNDHALKIAGIGTIKIKM 2
E W +DSA+++H+TS+REWF Y+ G V+LG+D + ++ G+G +K KM
Sbjct: 273 EAWMLDSASSYHVTSKREWFSSYKSGDFGVVYLGDDTSYRVVGVGDVKFKM 323