BLASTX nr result
ID: Cocculus23_contig00035197
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00035197
(290 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|B1ABS0.1|RBR_HIEPL RecName: Full=Retinoblastoma-related prote... 64 3e-08
sp|B1ABR6.1|RBR_HIEPI RecName: Full=Retinoblastoma-related prote... 64 3e-08
dbj|BAB03137.1| retinoblastoma-related protein [Arabidopsis thal... 62 1e-07
ref|XP_006465771.1| PREDICTED: retinoblastoma-related protein-li... 62 1e-07
ref|XP_006407348.1| hypothetical protein EUTSA_v10019977mg [Eutr... 62 1e-07
ref|XP_006407347.1| hypothetical protein EUTSA_v10019977mg [Eutr... 62 1e-07
ref|XP_006296912.1| hypothetical protein CARUB_v10012904mg [Caps... 62 1e-07
gb|AAG51072.1|AC069472_12 retinoblastoma-related protein, putati... 62 1e-07
ref|NP_566417.3| Retinoblastoma-related protein 1 [Arabidopsis t... 62 1e-07
gb|AFJ64575.1| retinoblastoma-related protein 3 [Brassica juncea] 62 1e-07
gb|AFJ64572.1| retinoblastoma-related protein 2 [Brassica nigra] 62 1e-07
ref|NP_001189868.1| Retinoblastoma-related protein 1 [Arabidopsi... 62 1e-07
ref|XP_002884896.1| hypothetical protein ARALYDRAFT_478590 [Arab... 62 1e-07
gb|AAL07142.1| putative retinoblastoma-related protein [Arabidop... 62 1e-07
ref|XP_006432412.1| hypothetical protein CICLE_v10000128mg [Citr... 61 1e-07
ref|XP_006432410.1| hypothetical protein CICLE_v10000128mg [Citr... 61 1e-07
ref|XP_006432409.1| hypothetical protein CICLE_v10000128mg [Citr... 61 1e-07
ref|XP_007010834.1| Retinoblastoma-related 1 [Theobroma cacao] g... 61 1e-07
gb|AFJ64577.1| retinoblastoma-related protein 1a [Brassica rapa] 61 1e-07
gb|AFJ64576.1| retinoblastoma-related protein 4 [Brassica juncea] 61 1e-07
>sp|B1ABS0.1|RBR_HIEPL RecName: Full=Retinoblastoma-related protein
gi|167593891|gb|ABZ85632.1| retinoblastoma-related
protein [Hieracium pilosella]
Length = 1008
Score = 63.5 bits (153), Expect = 3e-08
Identities = 28/30 (93%), Positives = 29/30 (96%)
Frame = -2
Query: 169 PCPGSPHVSSFPSVPDMSPKKVSAVHNVYV 80
PCPGSP VSSFPS+PDMSPKKVSAVHNVYV
Sbjct: 884 PCPGSPKVSSFPSLPDMSPKKVSAVHNVYV 913
>sp|B1ABR6.1|RBR_HIEPI RecName: Full=Retinoblastoma-related protein
gi|167593883|gb|ABZ85628.1| retinoblastoma-related
protein [Hieracium piloselloides]
Length = 1005
Score = 63.5 bits (153), Expect = 3e-08
Identities = 28/30 (93%), Positives = 29/30 (96%)
Frame = -2
Query: 169 PCPGSPHVSSFPSVPDMSPKKVSAVHNVYV 80
PCPGSP VSSFPS+PDMSPKKVSAVHNVYV
Sbjct: 884 PCPGSPKVSSFPSLPDMSPKKVSAVHNVYV 913
>dbj|BAB03137.1| retinoblastoma-related protein [Arabidopsis thaliana]
Length = 1021
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = -2
Query: 172 GPCPGSPHVSSFPSVPDMSPKKVSAVHNVYV 80
G CPGSP VS FPSVPDMSPKKVSAVHNVYV
Sbjct: 888 GQCPGSPKVSVFPSVPDMSPKKVSAVHNVYV 918
>ref|XP_006465771.1| PREDICTED: retinoblastoma-related protein-like [Citrus sinensis]
Length = 1024
Score = 61.6 bits (148), Expect = 1e-07
Identities = 27/35 (77%), Positives = 29/35 (82%)
Frame = -2
Query: 184 HFCTGPCPGSPHVSSFPSVPDMSPKKVSAVHNVYV 80
H GPCPGSP VS FP++PDMSPKKVSA HNVYV
Sbjct: 893 HSNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYV 927
>ref|XP_006407348.1| hypothetical protein EUTSA_v10019977mg [Eutrema salsugineum]
gi|557108494|gb|ESQ48801.1| hypothetical protein
EUTSA_v10019977mg [Eutrema salsugineum]
Length = 1011
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = -2
Query: 172 GPCPGSPHVSSFPSVPDMSPKKVSAVHNVYV 80
G CPGSP VS FPSVPDMSPKKVSAVHNVYV
Sbjct: 883 GQCPGSPKVSVFPSVPDMSPKKVSAVHNVYV 913
>ref|XP_006407347.1| hypothetical protein EUTSA_v10019977mg [Eutrema salsugineum]
gi|557108493|gb|ESQ48800.1| hypothetical protein
EUTSA_v10019977mg [Eutrema salsugineum]
Length = 1010
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = -2
Query: 172 GPCPGSPHVSSFPSVPDMSPKKVSAVHNVYV 80
G CPGSP VS FPSVPDMSPKKVSAVHNVYV
Sbjct: 883 GQCPGSPKVSVFPSVPDMSPKKVSAVHNVYV 913
>ref|XP_006296912.1| hypothetical protein CARUB_v10012904mg [Capsella rubella]
gi|482565621|gb|EOA29810.1| hypothetical protein
CARUB_v10012904mg [Capsella rubella]
Length = 959
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = -2
Query: 172 GPCPGSPHVSSFPSVPDMSPKKVSAVHNVYV 80
G CPGSP VS FPSVPDMSPKKVSAVHNVYV
Sbjct: 883 GQCPGSPKVSVFPSVPDMSPKKVSAVHNVYV 913
>gb|AAG51072.1|AC069472_12 retinoblastoma-related protein, putative; 44014-38352 [Arabidopsis
thaliana]
Length = 1088
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = -2
Query: 172 GPCPGSPHVSSFPSVPDMSPKKVSAVHNVYV 80
G CPGSP VS FPSVPDMSPKKVSAVHNVYV
Sbjct: 956 GQCPGSPKVSVFPSVPDMSPKKVSAVHNVYV 986
>ref|NP_566417.3| Retinoblastoma-related protein 1 [Arabidopsis thaliana]
gi|75263948|sp|Q9LKZ3.1|RBR1_ARATH RecName:
Full=Retinoblastoma-related protein 1; Short=AtRBR;
Short=AtRBR1 gi|8777927|gb|AAF79146.1|AF245395_1
retinoblastoma-related protein [Arabidopsis thaliana]
gi|23297484|gb|AAN12980.1| putative
retinoblastoma-related protein [Arabidopsis thaliana]
gi|332641658|gb|AEE75179.1| Retinoblastoma-related
protein 1 [Arabidopsis thaliana]
Length = 1013
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = -2
Query: 172 GPCPGSPHVSSFPSVPDMSPKKVSAVHNVYV 80
G CPGSP VS FPSVPDMSPKKVSAVHNVYV
Sbjct: 880 GQCPGSPKVSVFPSVPDMSPKKVSAVHNVYV 910
>gb|AFJ64575.1| retinoblastoma-related protein 3 [Brassica juncea]
Length = 1021
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = -2
Query: 172 GPCPGSPHVSSFPSVPDMSPKKVSAVHNVYV 80
G CPGSP VS FPSVPDMSPKKVSAVHNVYV
Sbjct: 883 GTCPGSPKVSVFPSVPDMSPKKVSAVHNVYV 913
>gb|AFJ64572.1| retinoblastoma-related protein 2 [Brassica nigra]
Length = 1023
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = -2
Query: 172 GPCPGSPHVSSFPSVPDMSPKKVSAVHNVYV 80
G CPGSP VS FPSVPDMSPKKVSAVHNVYV
Sbjct: 885 GTCPGSPKVSVFPSVPDMSPKKVSAVHNVYV 915
>ref|NP_001189868.1| Retinoblastoma-related protein 1 [Arabidopsis thaliana]
gi|332641659|gb|AEE75180.1| Retinoblastoma-related
protein 1 [Arabidopsis thaliana]
Length = 1012
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = -2
Query: 172 GPCPGSPHVSSFPSVPDMSPKKVSAVHNVYV 80
G CPGSP VS FPSVPDMSPKKVSAVHNVYV
Sbjct: 880 GQCPGSPKVSVFPSVPDMSPKKVSAVHNVYV 910
>ref|XP_002884896.1| hypothetical protein ARALYDRAFT_478590 [Arabidopsis lyrata subsp.
lyrata] gi|297330736|gb|EFH61155.1| hypothetical protein
ARALYDRAFT_478590 [Arabidopsis lyrata subsp. lyrata]
Length = 1012
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = -2
Query: 172 GPCPGSPHVSSFPSVPDMSPKKVSAVHNVYV 80
G CPGSP VS FPSVPDMSPKKVSAVHNVYV
Sbjct: 880 GQCPGSPKVSVFPSVPDMSPKKVSAVHNVYV 910
>gb|AAL07142.1| putative retinoblastoma-related protein [Arabidopsis thaliana]
Length = 1013
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = -2
Query: 172 GPCPGSPHVSSFPSVPDMSPKKVSAVHNVYV 80
G CPGSP VS FPSVPDMSPKKVSAVHNVYV
Sbjct: 880 GQCPGSPKVSVFPSVPDMSPKKVSAVHNVYV 910
>ref|XP_006432412.1| hypothetical protein CICLE_v10000128mg [Citrus clementina]
gi|557534534|gb|ESR45652.1| hypothetical protein
CICLE_v10000128mg [Citrus clementina]
Length = 957
Score = 61.2 bits (147), Expect = 1e-07
Identities = 27/35 (77%), Positives = 29/35 (82%)
Frame = -2
Query: 184 HFCTGPCPGSPHVSSFPSVPDMSPKKVSAVHNVYV 80
H GPCPGSP VS FP++PDMSPKKVSA HNVYV
Sbjct: 826 HNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYV 860
>ref|XP_006432410.1| hypothetical protein CICLE_v10000128mg [Citrus clementina]
gi|567879705|ref|XP_006432411.1| hypothetical protein
CICLE_v10000128mg [Citrus clementina]
gi|557534532|gb|ESR45650.1| hypothetical protein
CICLE_v10000128mg [Citrus clementina]
gi|557534533|gb|ESR45651.1| hypothetical protein
CICLE_v10000128mg [Citrus clementina]
Length = 912
Score = 61.2 bits (147), Expect = 1e-07
Identities = 27/35 (77%), Positives = 29/35 (82%)
Frame = -2
Query: 184 HFCTGPCPGSPHVSSFPSVPDMSPKKVSAVHNVYV 80
H GPCPGSP VS FP++PDMSPKKVSA HNVYV
Sbjct: 781 HNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYV 815
>ref|XP_006432409.1| hypothetical protein CICLE_v10000128mg [Citrus clementina]
gi|557534531|gb|ESR45649.1| hypothetical protein
CICLE_v10000128mg [Citrus clementina]
Length = 1024
Score = 61.2 bits (147), Expect = 1e-07
Identities = 27/35 (77%), Positives = 29/35 (82%)
Frame = -2
Query: 184 HFCTGPCPGSPHVSSFPSVPDMSPKKVSAVHNVYV 80
H GPCPGSP VS FP++PDMSPKKVSA HNVYV
Sbjct: 893 HNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYV 927
>ref|XP_007010834.1| Retinoblastoma-related 1 [Theobroma cacao]
gi|508727747|gb|EOY19644.1| Retinoblastoma-related 1
[Theobroma cacao]
Length = 1011
Score = 61.2 bits (147), Expect = 1e-07
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = -2
Query: 172 GPCPGSPHVSSFPSVPDMSPKKVSAVHNVYV 80
GPCPGSP V+ FPS+PDMSPKKVSA HNVYV
Sbjct: 886 GPCPGSPKVAPFPSLPDMSPKKVSATHNVYV 916
>gb|AFJ64577.1| retinoblastoma-related protein 1a [Brassica rapa]
Length = 992
Score = 61.2 bits (147), Expect = 1e-07
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = -2
Query: 172 GPCPGSPHVSSFPSVPDMSPKKVSAVHNVYV 80
G CPGSP VS FPSVPDMSPKKVSAVHNVYV
Sbjct: 885 GHCPGSPKVSVFPSVPDMSPKKVSAVHNVYV 915
>gb|AFJ64576.1| retinoblastoma-related protein 4 [Brassica juncea]
Length = 1017
Score = 61.2 bits (147), Expect = 1e-07
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = -2
Query: 172 GPCPGSPHVSSFPSVPDMSPKKVSAVHNVYV 80
G CPGSP VS FPSVPDMSPKKVSAVHNVYV
Sbjct: 877 GHCPGSPKVSVFPSVPDMSPKKVSAVHNVYV 907