BLASTX nr result
ID: Cocculus23_contig00035196
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00035196
(249 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006427693.1| hypothetical protein CICLE_v10025096mg [Citr... 66 6e-09
ref|XP_006493448.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containi... 61 1e-07
emb|CBI16054.3| unnamed protein product [Vitis vinifera] 61 1e-07
ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containi... 61 1e-07
gb|EXC10733.1| hypothetical protein L484_025317 [Morus notabilis] 60 4e-07
ref|XP_007016304.1| Tetratricopeptide repeat (TPR)-like superfam... 58 2e-06
ref|XP_002313416.2| chlororespiratory reduction 2 family protein... 56 4e-06
ref|XP_006418855.1| hypothetical protein EUTSA_v10002433mg [Eutr... 55 8e-06
ref|XP_004491940.1| PREDICTED: pentatricopeptide repeat-containi... 55 8e-06
>ref|XP_006427693.1| hypothetical protein CICLE_v10025096mg [Citrus clementina]
gi|557529683|gb|ESR40933.1| hypothetical protein
CICLE_v10025096mg [Citrus clementina]
Length = 662
Score = 65.9 bits (159), Expect = 6e-09
Identities = 31/45 (68%), Positives = 36/45 (80%)
Frame = -1
Query: 135 ASSLQTSLQRSNNDHLIQSLCKQGNIKQALQVLSTESNPTQHTYE 1
+S+ TSL N + LIQSLCKQGN+KQAL VLS+E NPTQHTYE
Sbjct: 40 SSTTPTSLSSRNKNELIQSLCKQGNLKQALDVLSSEPNPTQHTYE 84
>ref|XP_006493448.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Citrus sinensis]
Length = 662
Score = 63.9 bits (154), Expect = 2e-08
Identities = 30/45 (66%), Positives = 35/45 (77%)
Frame = -1
Query: 135 ASSLQTSLQRSNNDHLIQSLCKQGNIKQALQVLSTESNPTQHTYE 1
+S+ TSL N + LIQSLCKQGN++QAL VLS E NPTQHTYE
Sbjct: 40 SSTTPTSLSSRNKNELIQSLCKQGNLRQALDVLSIEPNPTQHTYE 84
>ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 61.2 bits (147), Expect = 1e-07
Identities = 34/53 (64%), Positives = 41/53 (77%), Gaps = 2/53 (3%)
Frame = -1
Query: 153 SSRLSIAS-SLQTSLQ-RSNNDHLIQSLCKQGNIKQALQVLSTESNPTQHTYE 1
+S+LS++S S S SNN+HLIQSLCKQGN+KQAL +LS ESNPTQ T E
Sbjct: 21 TSKLSVSSFSFNPSTPPNSNNNHLIQSLCKQGNLKQALYLLSHESNPTQQTCE 73
>emb|CBI16054.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 61.2 bits (147), Expect = 1e-07
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = -1
Query: 105 SNNDHLIQSLCKQGNIKQALQVLSTESNPTQHTYE 1
+NN+ LIQSLCKQGN+ QALQVLS E NPTQHTYE
Sbjct: 48 NNNNPLIQSLCKQGNLNQALQVLSQEPNPTQHTYE 82
>ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 61.2 bits (147), Expect = 1e-07
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = -1
Query: 105 SNNDHLIQSLCKQGNIKQALQVLSTESNPTQHTYE 1
+NN+ LIQSLCKQGN+ QALQVLS E NPTQHTYE
Sbjct: 48 NNNNPLIQSLCKQGNLNQALQVLSQEPNPTQHTYE 82
>gb|EXC10733.1| hypothetical protein L484_025317 [Morus notabilis]
Length = 659
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/50 (54%), Positives = 38/50 (76%)
Frame = -1
Query: 150 SRLSIASSLQTSLQRSNNDHLIQSLCKQGNIKQALQVLSTESNPTQHTYE 1
S ++I S+ T+ ++ + LIQSLCKQGN++QAL++L E NPTQHTYE
Sbjct: 33 SSITIKPSISTTKDTNDKNKLIQSLCKQGNLRQALKLLPHEPNPTQHTYE 82
>ref|XP_007016304.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao] gi|508786667|gb|EOY33923.1| Tetratricopeptide
repeat (TPR)-like superfamily protein [Theobroma cacao]
Length = 651
Score = 57.8 bits (138), Expect = 2e-06
Identities = 29/51 (56%), Positives = 38/51 (74%)
Frame = -1
Query: 153 SSRLSIASSLQTSLQRSNNDHLIQSLCKQGNIKQALQVLSTESNPTQHTYE 1
SS L++ S+ TS NN+ LIQSLCK+GN+KQA ++LS E NP+Q TYE
Sbjct: 27 SSSLTLNPSISTS--NLNNNQLIQSLCKEGNLKQAFKLLSQEPNPSQRTYE 75
>ref|XP_002313416.2| chlororespiratory reduction 2 family protein [Populus trichocarpa]
gi|550331005|gb|EEE87371.2| chlororespiratory reduction
2 family protein [Populus trichocarpa]
Length = 650
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/43 (58%), Positives = 33/43 (76%)
Frame = -1
Query: 129 SLQTSLQRSNNDHLIQSLCKQGNIKQALQVLSTESNPTQHTYE 1
+L + ++N+ LIQSLCKQGN+ QAL++LS E NP QHTYE
Sbjct: 32 TLNPTASTADNNKLIQSLCKQGNLTQALELLSLEPNPAQHTYE 74
>ref|XP_006418855.1| hypothetical protein EUTSA_v10002433mg [Eutrema salsugineum]
gi|557096783|gb|ESQ37291.1| hypothetical protein
EUTSA_v10002433mg [Eutrema salsugineum]
Length = 659
Score = 55.5 bits (132), Expect = 8e-06
Identities = 24/36 (66%), Positives = 33/36 (91%)
Frame = -1
Query: 108 RSNNDHLIQSLCKQGNIKQALQVLSTESNPTQHTYE 1
+++N+ LIQSLCK+GN+KQAL+VLS ES+P+Q TYE
Sbjct: 47 KASNNQLIQSLCKEGNLKQALRVLSQESSPSQQTYE 82
>ref|XP_004491940.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cicer arietinum]
Length = 661
Score = 55.5 bits (132), Expect = 8e-06
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 8/60 (13%)
Frame = -1
Query: 156 ISSRLSI--------ASSLQTSLQRSNNDHLIQSLCKQGNIKQALQVLSTESNPTQHTYE 1
+SSRL + +S+ T+ +NN+ LIQSLC+ GN+KQA+QVL TE NPTQ T+E
Sbjct: 26 VSSRLPVCFVSLNPSSSTNPTNDITNNNNDLIQSLCRGGNLKQAIQVLCTEPNPTQKTFE 85