BLASTX nr result

ID: Cocculus23_contig00034322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00034322
         (216 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006356077.1| PREDICTED: chlorophyll a-b binding protein 3...   154   9e-36
ref|XP_006356076.1| PREDICTED: chlorophyll a-b binding protein 3...   154   9e-36
ref|XP_006356075.1| PREDICTED: chlorophyll a-b binding protein 3...   154   9e-36
gb|AAA80591.1| chlorophyll a/b binding protein [Solanum tuberosum]    154   9e-36
dbj|BAA03104.1| light-harvesting chlorophyll a/b-binding protein...   154   1e-35
gb|AFV34722.1| light harvesting chlorophyll a/b-binding protein ...   154   1e-35
ref|XP_006356080.1| PREDICTED: chlorophyll a-b binding protein 3...   154   1e-35
gb|EMS50797.1| Chlorophyll a-b binding protein, chloroplastic [T...   154   1e-35
gb|AAB18209.1| chlorophyll a/b-binding protein WCAB precursor [T...   154   1e-35
dbj|BAJ87045.1| predicted protein [Hordeum vulgare subsp. vulgare]    154   1e-35
dbj|BAK02173.1| predicted protein [Hordeum vulgare subsp. vulgare]    154   1e-35
dbj|BAJ85110.1| predicted protein [Hordeum vulgare subsp. vulgar...   154   1e-35
dbj|BAJ89881.1| predicted protein [Hordeum vulgare subsp. vulgare]    154   1e-35
emb|CAX64458.1| major chlorophyll a/b binding protein LHCb1.4 pr...   154   1e-35
emb|CAJ77391.1| major chlorophyll a/b binding protein LHCb1.1 [S...   154   1e-35
emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [S...   154   1e-35
sp|P12332.2|CB21_SILPR RecName: Full=Chlorophyll a-b binding pro...   154   2e-35
ref|XP_006836754.1| hypothetical protein AMTR_s00088p00153020 [A...   154   2e-35
ref|XP_004293460.1| PREDICTED: chlorophyll a-b binding protein 1...   154   2e-35
dbj|BAA25396.1| light harvesting chlorophyll a/b-binding protein...   153   2e-35

>ref|XP_006356077.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
           [Solanum tuberosum]
          Length = 267

 Score =  154 bits (390), Expect = 9e-36
 Identities = 70/72 (97%), Positives = 72/72 (100%)
 Frame = +1

Query: 1   TPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLSRNGVK 180
           +PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL+RNGVK
Sbjct: 67  SPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARNGVK 126

Query: 181 FGEAVWFKAGSQ 216
           FGEAVWFKAGSQ
Sbjct: 127 FGEAVWFKAGSQ 138


>ref|XP_006356076.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
           isoform X2 [Solanum tuberosum]
          Length = 267

 Score =  154 bits (390), Expect = 9e-36
 Identities = 70/72 (97%), Positives = 72/72 (100%)
 Frame = +1

Query: 1   TPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLSRNGVK 180
           +PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL+RNGVK
Sbjct: 67  SPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARNGVK 126

Query: 181 FGEAVWFKAGSQ 216
           FGEAVWFKAGSQ
Sbjct: 127 FGEAVWFKAGSQ 138


>ref|XP_006356075.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
           isoform X1 [Solanum tuberosum]
          Length = 267

 Score =  154 bits (390), Expect = 9e-36
 Identities = 70/72 (97%), Positives = 72/72 (100%)
 Frame = +1

Query: 1   TPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLSRNGVK 180
           +PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL+RNGVK
Sbjct: 67  SPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARNGVK 126

Query: 181 FGEAVWFKAGSQ 216
           FGEAVWFKAGSQ
Sbjct: 127 FGEAVWFKAGSQ 138


>gb|AAA80591.1| chlorophyll a/b binding protein [Solanum tuberosum]
          Length = 265

 Score =  154 bits (390), Expect = 9e-36
 Identities = 70/72 (97%), Positives = 72/72 (100%)
 Frame = +1

Query: 1   TPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLSRNGVK 180
           +PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELLSRNGVK
Sbjct: 65  SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLSRNGVK 124

Query: 181 FGEAVWFKAGSQ 216
           FGEAVWFKAGSQ
Sbjct: 125 FGEAVWFKAGSQ 136


>dbj|BAA03104.1| light-harvesting chlorophyll a/b-binding protein (LHCP) precursor
           [Lactuca sativa]
          Length = 266

 Score =  154 bits (389), Expect = 1e-35
 Identities = 70/71 (98%), Positives = 71/71 (100%)
 Frame = +1

Query: 4   PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLSRNGVKF 183
           PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL+RNGVKF
Sbjct: 67  PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 126

Query: 184 GEAVWFKAGSQ 216
           GEAVWFKAGSQ
Sbjct: 127 GEAVWFKAGSQ 137


>gb|AFV34722.1| light harvesting chlorophyll a/b-binding protein 1-1 [Dendrocalamus
           latiflorus]
          Length = 265

 Score =  154 bits (389), Expect = 1e-35
 Identities = 70/71 (98%), Positives = 71/71 (100%)
 Frame = +1

Query: 4   PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLSRNGVKF 183
           PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELLSRNGVKF
Sbjct: 66  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLSRNGVKF 125

Query: 184 GEAVWFKAGSQ 216
           GEAVWFKAGSQ
Sbjct: 126 GEAVWFKAGSQ 136


>ref|XP_006356080.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
           [Solanum tuberosum]
          Length = 267

 Score =  154 bits (389), Expect = 1e-35
 Identities = 70/71 (98%), Positives = 71/71 (100%)
 Frame = +1

Query: 4   PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLSRNGVKF 183
           PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL+RNGVKF
Sbjct: 68  PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 127

Query: 184 GEAVWFKAGSQ 216
           GEAVWFKAGSQ
Sbjct: 128 GEAVWFKAGSQ 138


>gb|EMS50797.1| Chlorophyll a-b binding protein, chloroplastic [Triticum urartu]
          Length = 266

 Score =  154 bits (389), Expect = 1e-35
 Identities = 70/71 (98%), Positives = 71/71 (100%)
 Frame = +1

Query: 4   PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLSRNGVKF 183
           PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL+RNGVKF
Sbjct: 67  PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 126

Query: 184 GEAVWFKAGSQ 216
           GEAVWFKAGSQ
Sbjct: 127 GEAVWFKAGSQ 137


>gb|AAB18209.1| chlorophyll a/b-binding protein WCAB precursor [Triticum aestivum]
          Length = 266

 Score =  154 bits (389), Expect = 1e-35
 Identities = 70/71 (98%), Positives = 71/71 (100%)
 Frame = +1

Query: 4   PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLSRNGVKF 183
           PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL+RNGVKF
Sbjct: 67  PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 126

Query: 184 GEAVWFKAGSQ 216
           GEAVWFKAGSQ
Sbjct: 127 GEAVWFKAGSQ 137


>dbj|BAJ87045.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 266

 Score =  154 bits (389), Expect = 1e-35
 Identities = 70/71 (98%), Positives = 71/71 (100%)
 Frame = +1

Query: 4   PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLSRNGVKF 183
           PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL+RNGVKF
Sbjct: 67  PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 126

Query: 184 GEAVWFKAGSQ 216
           GEAVWFKAGSQ
Sbjct: 127 GEAVWFKAGSQ 137


>dbj|BAK02173.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 266

 Score =  154 bits (389), Expect = 1e-35
 Identities = 70/71 (98%), Positives = 71/71 (100%)
 Frame = +1

Query: 4   PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLSRNGVKF 183
           PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL+RNGVKF
Sbjct: 67  PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 126

Query: 184 GEAVWFKAGSQ 216
           GEAVWFKAGSQ
Sbjct: 127 GEAVWFKAGSQ 137


>dbj|BAJ85110.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326493328|dbj|BAJ85125.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 266

 Score =  154 bits (389), Expect = 1e-35
 Identities = 70/71 (98%), Positives = 71/71 (100%)
 Frame = +1

Query: 4   PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLSRNGVKF 183
           PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL+RNGVKF
Sbjct: 67  PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 126

Query: 184 GEAVWFKAGSQ 216
           GEAVWFKAGSQ
Sbjct: 127 GEAVWFKAGSQ 137


>dbj|BAJ89881.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 266

 Score =  154 bits (389), Expect = 1e-35
 Identities = 70/71 (98%), Positives = 71/71 (100%)
 Frame = +1

Query: 4   PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLSRNGVKF 183
           PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL+RNGVKF
Sbjct: 67  PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 126

Query: 184 GEAVWFKAGSQ 216
           GEAVWFKAGSQ
Sbjct: 127 GEAVWFKAGSQ 137


>emb|CAX64458.1| major chlorophyll a/b binding protein LHCb1.4 precursor [Spinacia
           oleracea]
          Length = 267

 Score =  154 bits (389), Expect = 1e-35
 Identities = 70/71 (98%), Positives = 71/71 (100%)
 Frame = +1

Query: 4   PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLSRNGVKF 183
           PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL+RNGVKF
Sbjct: 68  PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 127

Query: 184 GEAVWFKAGSQ 216
           GEAVWFKAGSQ
Sbjct: 128 GEAVWFKAGSQ 138


>emb|CAJ77391.1| major chlorophyll a/b binding protein LHCb1.1 [Spinacia oleracea]
           gi|283549607|emb|CAX64457.1| major chlorophyll a/b
           binding protein LHCb1.1 precursor [Spinacia oleracea]
          Length = 267

 Score =  154 bits (389), Expect = 1e-35
 Identities = 70/71 (98%), Positives = 71/71 (100%)
 Frame = +1

Query: 4   PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLSRNGVKF 183
           PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL+RNGVKF
Sbjct: 68  PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 127

Query: 184 GEAVWFKAGSQ 216
           GEAVWFKAGSQ
Sbjct: 128 GEAVWFKAGSQ 138


>emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [Spinacia oleracea]
          Length = 267

 Score =  154 bits (389), Expect = 1e-35
 Identities = 70/71 (98%), Positives = 71/71 (100%)
 Frame = +1

Query: 4   PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLSRNGVKF 183
           PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL+RNGVKF
Sbjct: 68  PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 127

Query: 184 GEAVWFKAGSQ 216
           GEAVWFKAGSQ
Sbjct: 128 GEAVWFKAGSQ 138


>sp|P12332.2|CB21_SILPR RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
           AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
           Precursor gi|169886|gb|AAB42157.1|
           chlorophyl-a/b-binding protein precursor, partial
           [Silene latifolia subsp. alba]
          Length = 205

 Score =  154 bits (388), Expect = 2e-35
 Identities = 69/72 (95%), Positives = 72/72 (100%)
 Frame = +1

Query: 1   TPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLSRNGVK 180
           TPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL++NGVK
Sbjct: 64  TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVK 123

Query: 181 FGEAVWFKAGSQ 216
           FGEAVWFKAGSQ
Sbjct: 124 FGEAVWFKAGSQ 135


>ref|XP_006836754.1| hypothetical protein AMTR_s00088p00153020 [Amborella trichopoda]
           gi|548839314|gb|ERM99607.1| hypothetical protein
           AMTR_s00088p00153020 [Amborella trichopoda]
          Length = 264

 Score =  154 bits (388), Expect = 2e-35
 Identities = 69/72 (95%), Positives = 72/72 (100%)
 Frame = +1

Query: 1   TPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLSRNGVK 180
           TPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL+RNGVK
Sbjct: 64  TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 123

Query: 181 FGEAVWFKAGSQ 216
           FGE+VWFKAGSQ
Sbjct: 124 FGESVWFKAGSQ 135


>ref|XP_004293460.1| PREDICTED: chlorophyll a-b binding protein 151, chloroplastic-like
           [Fragaria vesca subsp. vesca]
          Length = 265

 Score =  154 bits (388), Expect = 2e-35
 Identities = 69/72 (95%), Positives = 72/72 (100%)
 Frame = +1

Query: 1   TPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLSRNGVK 180
           TPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPE+LS+NGVK
Sbjct: 65  TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEVLSKNGVK 124

Query: 181 FGEAVWFKAGSQ 216
           FGEAVWFKAGSQ
Sbjct: 125 FGEAVWFKAGSQ 136


>dbj|BAA25396.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
           sylvestris]
          Length = 267

 Score =  153 bits (387), Expect = 2e-35
 Identities = 69/72 (95%), Positives = 72/72 (100%)
 Frame = +1

Query: 1   TPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLSRNGVK 180
           +PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL+RNGVK
Sbjct: 67  SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 126

Query: 181 FGEAVWFKAGSQ 216
           FGEAVWFKAGSQ
Sbjct: 127 FGEAVWFKAGSQ 138


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