BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00033948
         (292 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGX45499.1| reverse transcriptase, partial [Prunus salicina]       148   7e-34
gb|AGX45504.1| reverse transcriptase, partial [Prunus salicina]       147   2e-33
gb|AGX45503.1| reverse transcriptase, partial [Prunus salicina]       147   2e-33
gb|AGX45496.1| reverse transcriptase, partial [Prunus salicina]       147   2e-33
ref|XP_007219089.1| hypothetical protein PRUPE_ppa015100mg, part...   147   2e-33
ref|XP_007226950.1| hypothetical protein PRUPE_ppa025194mg, part...   146   3e-33
ref|XP_007224256.1| hypothetical protein PRUPE_ppa018408mg, part...   145   6e-33
gb|AGX45502.1| reverse transcriptase, partial [Prunus salicina]       145   8e-33
ref|XP_007203318.1| hypothetical protein PRUPE_ppa019964mg, part...   144   1e-32
gb|AAU90169.1| putative polyprotein [Oryza sativa Japonica Group]     142   6e-32
ref|XP_007219137.1| hypothetical protein PRUPE_ppa015965mg [Prun...   141   1e-31
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]              140   2e-31
gb|ABA98082.1| retrotransposon protein, putative, Ty3-gypsy subc...   138   7e-31
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...   138   7e-31
emb|CAE04927.2| OSJNBa0017P10.4 [Oryza sativa Japonica Group] gi...   138   7e-31
dbj|BAH80072.1| putative unclassified retrotransposon protein [O...   138   7e-31
emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group]        138   9e-31
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]                 137   1e-30
gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]                 137   1e-30
gb|ADB27474.1| gag-pol polyprotein [Melinis minutiflora]              137   1e-30

>gb|AGX45499.1| reverse transcriptase, partial [Prunus salicina]
          Length = 143

 Score =  148 bits (374), Expect = 7e-34
 Identities = 69/95 (72%), Positives = 82/95 (86%)
 Frame = +2

Query: 5   AIYFSKVDLKSGYHQVRMKEEDIWKTAFKTKQGLDEWLVMPFGLTNAPATFMRLMNKVMR 184
           A YF+K+DLKSGYHQVR+ +ED WKTAFKTKQGL EWLVMPFGL NAPATFMRLMN+V+R
Sbjct: 33  ARYFTKLDLKSGYHQVRIHDEDTWKTAFKTKQGLFEWLVMPFGLCNAPATFMRLMNEVLR 92

Query: 185 PVLDKFTIVFLDDILVYSPT*KEHLSHLRTVLQIL 289
           P +D F IV+LDDIL++S T KEHL H+  VL++L
Sbjct: 93  PFIDDFVIVYLDDILIFSVTWKEHLHHIAKVLEVL 127


>gb|AGX45504.1| reverse transcriptase, partial [Prunus salicina]
          Length = 143

 Score =  147 bits (370), Expect = 2e-33
 Identities = 68/95 (71%), Positives = 82/95 (86%)
 Frame = +2

Query: 5   AIYFSKVDLKSGYHQVRMKEEDIWKTAFKTKQGLDEWLVMPFGLTNAPATFMRLMNKVMR 184
           A YF+K+DLKSGYHQVR+ +ED WKTAFKTKQGL EWLVMPFGL NAPATFMRL+N+V+R
Sbjct: 33  ARYFTKLDLKSGYHQVRIHDEDTWKTAFKTKQGLFEWLVMPFGLCNAPATFMRLVNEVLR 92

Query: 185 PVLDKFTIVFLDDILVYSPT*KEHLSHLRTVLQIL 289
           P +D F IV+LDDIL++S T KEHL H+  VL++L
Sbjct: 93  PFIDDFVIVYLDDILIFSVTWKEHLHHIAKVLEVL 127


>gb|AGX45503.1| reverse transcriptase, partial [Prunus salicina]
          Length = 143

 Score =  147 bits (370), Expect = 2e-33
 Identities = 68/95 (71%), Positives = 82/95 (86%)
 Frame = +2

Query: 5   AIYFSKVDLKSGYHQVRMKEEDIWKTAFKTKQGLDEWLVMPFGLTNAPATFMRLMNKVMR 184
           A YF+K+DLKSGYHQVR+ EED WKTAFKTKQGL EWLVMPFGL NAPATFMRLMN+V+R
Sbjct: 33  ARYFTKLDLKSGYHQVRIHEEDTWKTAFKTKQGLFEWLVMPFGLCNAPATFMRLMNEVLR 92

Query: 185 PVLDKFTIVFLDDILVYSPT*KEHLSHLRTVLQIL 289
           P +D F IV+LDDIL++S T ++HL H+  VL++L
Sbjct: 93  PFIDDFVIVYLDDILIFSVTWEDHLHHIAQVLEVL 127


>gb|AGX45496.1| reverse transcriptase, partial [Prunus salicina]
          Length = 143

 Score =  147 bits (370), Expect = 2e-33
 Identities = 68/95 (71%), Positives = 82/95 (86%)
 Frame = +2

Query: 5   AIYFSKVDLKSGYHQVRMKEEDIWKTAFKTKQGLDEWLVMPFGLTNAPATFMRLMNKVMR 184
           A YF+K+DLKSGYHQVR+ EED WKTAFKTKQGL EWLVMPFGL NAPATFMRLMN+V+R
Sbjct: 33  ARYFTKLDLKSGYHQVRIHEEDTWKTAFKTKQGLFEWLVMPFGLCNAPATFMRLMNEVLR 92

Query: 185 PVLDKFTIVFLDDILVYSPT*KEHLSHLRTVLQIL 289
           P +D F IV+LDDIL++S T ++HL H+  VL++L
Sbjct: 93  PFIDDFVIVYLDDILIFSVTWEDHLHHIAQVLEVL 127


>ref|XP_007219089.1| hypothetical protein PRUPE_ppa015100mg, partial [Prunus persica]
           gi|462415551|gb|EMJ20288.1| hypothetical protein
           PRUPE_ppa015100mg, partial [Prunus persica]
          Length = 641

 Score =  147 bits (370), Expect = 2e-33
 Identities = 68/95 (71%), Positives = 82/95 (86%)
 Frame = +2

Query: 5   AIYFSKVDLKSGYHQVRMKEEDIWKTAFKTKQGLDEWLVMPFGLTNAPATFMRLMNKVMR 184
           A YF+K+DLKSGYHQVR+ EED WKTAFKTKQGL EWLVMPFGL NAPATFMRLMN+V+R
Sbjct: 242 AHYFTKLDLKSGYHQVRIHEEDTWKTAFKTKQGLFEWLVMPFGLCNAPATFMRLMNEVLR 301

Query: 185 PVLDKFTIVFLDDILVYSPT*KEHLSHLRTVLQIL 289
           P +D F IV+LDDIL++S T ++HL H+  VL++L
Sbjct: 302 PFIDDFVIVYLDDILIFSVTWEDHLHHIAQVLEVL 336


>ref|XP_007226950.1| hypothetical protein PRUPE_ppa025194mg, partial [Prunus persica]
           gi|462423886|gb|EMJ28149.1| hypothetical protein
           PRUPE_ppa025194mg, partial [Prunus persica]
          Length = 1347

 Score =  146 bits (369), Expect = 3e-33
 Identities = 68/95 (71%), Positives = 82/95 (86%)
 Frame = +2

Query: 5   AIYFSKVDLKSGYHQVRMKEEDIWKTAFKTKQGLDEWLVMPFGLTNAPATFMRLMNKVMR 184
           A YF+K+DLKSGYHQVR+ EED WKTAFKTKQGL EWLVMPFGL NAPATFMRLMN+V+R
Sbjct: 595 AHYFTKLDLKSGYHQVRIHEEDTWKTAFKTKQGLFEWLVMPFGLCNAPATFMRLMNEVLR 654

Query: 185 PVLDKFTIVFLDDILVYSPT*KEHLSHLRTVLQIL 289
           P +D F IV+LDDIL++S T ++HL H+  VL++L
Sbjct: 655 PFIDDFIIVYLDDILIFSVTWEDHLHHIAQVLEVL 689


>ref|XP_007224256.1| hypothetical protein PRUPE_ppa018408mg, partial [Prunus persica]
           gi|462421192|gb|EMJ25455.1| hypothetical protein
           PRUPE_ppa018408mg, partial [Prunus persica]
          Length = 1440

 Score =  145 bits (366), Expect = 6e-33
 Identities = 67/95 (70%), Positives = 82/95 (86%)
 Frame = +2

Query: 5   AIYFSKVDLKSGYHQVRMKEEDIWKTAFKTKQGLDEWLVMPFGLTNAPATFMRLMNKVMR 184
           A YF+K+DLKSGYHQVR+ EED WKTAFKTKQGL EWLVMPFGL NAPATFM+LMN+V+R
Sbjct: 668 AHYFTKLDLKSGYHQVRIHEEDTWKTAFKTKQGLFEWLVMPFGLCNAPATFMQLMNEVLR 727

Query: 185 PVLDKFTIVFLDDILVYSPT*KEHLSHLRTVLQIL 289
           P +D F IV+LDDIL++S T ++HL H+  VL++L
Sbjct: 728 PFIDDFVIVYLDDILIFSVTWEDHLHHIAQVLEVL 762


>gb|AGX45502.1| reverse transcriptase, partial [Prunus salicina]
          Length = 143

 Score =  145 bits (365), Expect = 8e-33
 Identities = 67/95 (70%), Positives = 81/95 (85%)
 Frame = +2

Query: 5   AIYFSKVDLKSGYHQVRMKEEDIWKTAFKTKQGLDEWLVMPFGLTNAPATFMRLMNKVMR 184
           A YF+K+DLKSGYHQVR+ +ED WKTAFKT QGL EWLVMPFGL NAPATFMRLMN+V+R
Sbjct: 33  ARYFTKLDLKSGYHQVRIHDEDTWKTAFKTNQGLFEWLVMPFGLCNAPATFMRLMNEVLR 92

Query: 185 PVLDKFTIVFLDDILVYSPT*KEHLSHLRTVLQIL 289
           P +D F IV+LDDIL++S T +EHL H+  VL++L
Sbjct: 93  PFIDDFVIVYLDDILIFSVTWEEHLHHIAQVLEVL 127


>ref|XP_007203318.1| hypothetical protein PRUPE_ppa019964mg, partial [Prunus persica]
           gi|462398849|gb|EMJ04517.1| hypothetical protein
           PRUPE_ppa019964mg, partial [Prunus persica]
          Length = 1488

 Score =  144 bits (364), Expect = 1e-32
 Identities = 67/95 (70%), Positives = 81/95 (85%)
 Frame = +2

Query: 5   AIYFSKVDLKSGYHQVRMKEEDIWKTAFKTKQGLDEWLVMPFGLTNAPATFMRLMNKVMR 184
           A YF+K+DLKSGYHQVR+ EED WKTAFK KQGL EWLVMPFGL NAPATFMRLMN+V+R
Sbjct: 668 AHYFTKLDLKSGYHQVRIHEEDTWKTAFKIKQGLFEWLVMPFGLCNAPATFMRLMNEVLR 727

Query: 185 PVLDKFTIVFLDDILVYSPT*KEHLSHLRTVLQIL 289
           P +D F IV+LDDIL++S T ++HL H+  VL++L
Sbjct: 728 PFIDDFVIVYLDDILIFSVTWEDHLHHIAQVLEVL 762


>gb|AAU90169.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1154

 Score =  142 bits (357), Expect = 6e-32
 Identities = 65/95 (68%), Positives = 80/95 (84%)
 Frame = +2

Query: 5   AIYFSKVDLKSGYHQVRMKEEDIWKTAFKTKQGLDEWLVMPFGLTNAPATFMRLMNKVMR 184
           A+ FSK+DL+SGYHQ+RMKE D WK AFKTK GL EWLVMPFGLTNAP+TFMRLMN V+R
Sbjct: 556 AVIFSKIDLRSGYHQIRMKEGDEWKIAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLR 615

Query: 185 PVLDKFTIVFLDDILVYSPT*KEHLSHLRTVLQIL 289
             + KF +V+ DDIL+YS T +EHL+H+R VL++L
Sbjct: 616 AFIGKFVVVYFDDILIYSKTMEEHLAHIRQVLEML 650


>ref|XP_007219137.1| hypothetical protein PRUPE_ppa015965mg [Prunus persica]
           gi|462415599|gb|EMJ20336.1| hypothetical protein
           PRUPE_ppa015965mg [Prunus persica]
          Length = 1484

 Score =  141 bits (355), Expect = 1e-31
 Identities = 65/88 (73%), Positives = 77/88 (87%)
 Frame = +2

Query: 5   AIYFSKVDLKSGYHQVRMKEEDIWKTAFKTKQGLDEWLVMPFGLTNAPATFMRLMNKVMR 184
           A YF+K+DLKSGYHQVR+ EED WKTAFKTKQGL EWLVMPFGL NAPATFMRLMN+V+R
Sbjct: 681 AHYFTKLDLKSGYHQVRIHEEDTWKTAFKTKQGLFEWLVMPFGLCNAPATFMRLMNEVLR 740

Query: 185 PVLDKFTIVFLDDILVYSPT*KEHLSHL 268
           P +D F IV+LDDIL++S T ++HL H+
Sbjct: 741 PFIDDFVIVYLDDILIFSVTWEDHLHHI 768


>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
          Length = 1887

 Score =  140 bits (353), Expect = 2e-31
 Identities = 66/92 (71%), Positives = 78/92 (84%)
 Frame = +2

Query: 14   FSKVDLKSGYHQVRMKEEDIWKTAFKTKQGLDEWLVMPFGLTNAPATFMRLMNKVMRPVL 193
            FSKVDLKSGYHQ+RMKE D WKTAFKT QGL EWLVMPFGLTNAP+TFMRLMN V+R  +
Sbjct: 996  FSKVDLKSGYHQIRMKEGDEWKTAFKTIQGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFI 1055

Query: 194  DKFTIVFLDDILVYSPT*KEHLSHLRTVLQIL 289
             +F IV+ DDILVYS + +EH+ HL+ VL++L
Sbjct: 1056 GRFVIVYFDDILVYSKSLEEHVEHLKMVLEVL 1087


>gb|ABA98082.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 817

 Score =  138 bits (348), Expect = 7e-31
 Identities = 65/95 (68%), Positives = 77/95 (81%)
 Frame = +2

Query: 5   AIYFSKVDLKSGYHQVRMKEEDIWKTAFKTKQGLDEWLVMPFGLTNAPATFMRLMNKVMR 184
           +I FSKVDL+SGYHQ+RMK  D WKTAFKTK GL EWLVMPFGLTNAP+TFMRLMN+V+R
Sbjct: 134 SIVFSKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLR 193

Query: 185 PVLDKFTIVFLDDILVYSPT*KEHLSHLRTVLQIL 289
           P + KF +V+ DDIL+YS +  EH +HLR V   L
Sbjct: 194 PFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNAL 228


>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431012|gb|AAP52850.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2447

 Score =  138 bits (348), Expect = 7e-31
 Identities = 65/95 (68%), Positives = 77/95 (81%)
 Frame = +2

Query: 5    AIYFSKVDLKSGYHQVRMKEEDIWKTAFKTKQGLDEWLVMPFGLTNAPATFMRLMNKVMR 184
            +I FSKVDL+SGYHQ+RMK  D WKTAFKTK GL EWLVMPFGLTNAP+TFMRLMN+V+R
Sbjct: 801  SIVFSKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLR 860

Query: 185  PVLDKFTIVFLDDILVYSPT*KEHLSHLRTVLQIL 289
            P + KF +V+ DDIL+YS +  EH +HLR V   L
Sbjct: 861  PFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNAL 895



 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 39/60 (65%), Positives = 45/60 (75%)
 Frame = +2

Query: 101  GLDEWLVMPFGLTNAPATFMRLMNKVMRPVLDKFTIVFLDDILVYSPT*KEHLSHLRTVL 280
            GL E+ VM FGLTNAPA FM LMNKV    LDKF +VF+DDILVYS + ++H  HLR VL
Sbjct: 1625 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILVYSQSEEDHQHHLRLVL 1684


>emb|CAE04927.2| OSJNBa0017P10.4 [Oryza sativa Japonica Group]
            gi|38345441|emb|CAE03293.2| OSJNBb0046P18.9 [Oryza sativa
            Japonica Group]
          Length = 1134

 Score =  138 bits (348), Expect = 7e-31
 Identities = 65/95 (68%), Positives = 77/95 (81%)
 Frame = +2

Query: 5    AIYFSKVDLKSGYHQVRMKEEDIWKTAFKTKQGLDEWLVMPFGLTNAPATFMRLMNKVMR 184
            +I FSKVDL+SGYHQ+RMK  D WKTAFKTK GL EWLVMPFGLTNAP TFMRLMN+V+R
Sbjct: 984  SIVFSKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPNTFMRLMNEVLR 1043

Query: 185  PVLDKFTIVFLDDILVYSPT*KEHLSHLRTVLQIL 289
            P ++KF +V+ DDIL+YS +  EH +HLR V   L
Sbjct: 1044 PFIEKFVVVYFDDILIYSKSMGEHFNHLRAVFNAL 1078


>dbj|BAH80072.1| putative unclassified retrotransposon protein [Oryza sativa Indica
           Group]
          Length = 848

 Score =  138 bits (348), Expect = 7e-31
 Identities = 65/95 (68%), Positives = 77/95 (81%)
 Frame = +2

Query: 5   AIYFSKVDLKSGYHQVRMKEEDIWKTAFKTKQGLDEWLVMPFGLTNAPATFMRLMNKVMR 184
           +I FSKVDL+SGYHQ+RMK  D WKTAFKTK GL EWLVMPFGLTNAP+TFMRLMN+V+R
Sbjct: 165 SIVFSKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLR 224

Query: 185 PVLDKFTIVFLDDILVYSPT*KEHLSHLRTVLQIL 289
           P + KF +V+ DDIL+YS +  EH +HLR V   L
Sbjct: 225 PFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNAL 259


>emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group]
          Length = 1431

 Score =  138 bits (347), Expect = 9e-31
 Identities = 65/95 (68%), Positives = 76/95 (80%)
 Frame = +2

Query: 5    AIYFSKVDLKSGYHQVRMKEEDIWKTAFKTKQGLDEWLVMPFGLTNAPATFMRLMNKVMR 184
            +I FSKVDL+SGYHQ+RMK  D WKTAFKTK GL EWLVMPFGLTNAP+TFMRLMN+V+R
Sbjct: 746  SIVFSKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLR 805

Query: 185  PVLDKFTIVFLDDILVYSPT*KEHLSHLRTVLQIL 289
            P + KF +V+ DDIL+YS +  EH  HLR V   L
Sbjct: 806  PFIGKFVVVYFDDILIYSKSMGEHFKHLRAVFNAL 840


>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
          Length = 1475

 Score =  137 bits (346), Expect = 1e-30
 Identities = 62/92 (67%), Positives = 77/92 (83%)
 Frame = +2

Query: 14  FSKVDLKSGYHQVRMKEEDIWKTAFKTKQGLDEWLVMPFGLTNAPATFMRLMNKVMRPVL 193
           FSK+DL+ GYHQVR+KE D WKTAFKTK GL EWLVMPFGL+NAP+TFMRLM +V+RP L
Sbjct: 690 FSKIDLRQGYHQVRIKEGDEWKTAFKTKHGLYEWLVMPFGLSNAPSTFMRLMTEVLRPYL 749

Query: 194 DKFTIVFLDDILVYSPT*KEHLSHLRTVLQIL 289
            +F +V+ DDILVYSP+ +EHL HL+ + + L
Sbjct: 750 GRFVVVYFDDILVYSPSKEEHLKHLQVLFETL 781


>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
          Length = 1518

 Score =  137 bits (346), Expect = 1e-30
 Identities = 65/95 (68%), Positives = 76/95 (80%)
 Frame = +2

Query: 5   AIYFSKVDLKSGYHQVRMKEEDIWKTAFKTKQGLDEWLVMPFGLTNAPATFMRLMNKVMR 184
           A  FSK+DL+ GYHQVR++E D WKTAFKTK GL EWLVMPFGL+NAP+TFMRLM +V+R
Sbjct: 699 ASIFSKIDLRQGYHQVRIREGDEWKTAFKTKHGLYEWLVMPFGLSNAPSTFMRLMTEVLR 758

Query: 185 PVLDKFTIVFLDDILVYSPT*KEHLSHLRTVLQIL 289
           P L KF +V+ DDILVYS T  EHL HL  V +IL
Sbjct: 759 PCLGKFAVVYFDDILVYSKTKGEHLKHLEVVFKIL 793


>gb|ADB27474.1| gag-pol polyprotein [Melinis minutiflora]
          Length = 256

 Score =  137 bits (346), Expect = 1e-30
 Identities = 66/95 (69%), Positives = 76/95 (80%)
 Frame = +2

Query: 5   AIYFSKVDLKSGYHQVRMKEEDIWKTAFKTKQGLDEWLVMPFGLTNAPATFMRLMNKVMR 184
           AI FSKVDL+SGYHQ+RMK  D WKTAFKTK GL EWLVMPFGLTNAP+TFMRLMN+V+R
Sbjct: 33  AIVFSKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLR 92

Query: 185 PVLDKFTIVFLDDILVYSPT*KEHLSHLRTVLQIL 289
             + KF +V+ DDIL+YS +  EHL HLR V   L
Sbjct: 93  AFIGKFVVVYFDDILIYSKSMGEHLDHLRAVFNAL 127