BLASTX nr result
ID: Cocculus23_contig00033427
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00033427
(299 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273302.1| PREDICTED: uncharacterized protein LOC100266... 153 3e-35
ref|XP_002514596.1| splicing factor, arginine/serine-rich 2,rnap... 141 8e-32
ref|XP_006354741.1| PREDICTED: PHD and RING finger domain-contai... 140 2e-31
ref|XP_004241616.1| PREDICTED: uncharacterized protein LOC101264... 133 3e-29
ref|XP_007037677.1| RING/U-box protein, putative isoform 1 [Theo... 130 2e-28
ref|XP_006485719.1| PREDICTED: uncharacterized protein LOC102630... 129 4e-28
ref|XP_006440830.1| hypothetical protein CICLE_v10019179mg [Citr... 129 4e-28
ref|XP_004965231.1| PREDICTED: uncharacterized protein LOC101772... 128 7e-28
ref|XP_004508644.1| PREDICTED: uncharacterized protein LOC101504... 127 1e-27
gb|EXB89099.1| PHD and RING finger domain-containing protein 1 [... 127 2e-27
gb|AGH18689.1| PHD-finger family protein [Triticum monococcum] 125 6e-27
ref|XP_002436876.1| hypothetical protein SORBIDRAFT_10g010430 [S... 124 2e-26
ref|XP_004301094.1| PREDICTED: uncharacterized protein LOC101292... 123 2e-26
gb|EYU38152.1| hypothetical protein MIMGU_mgv1a003288mg [Mimulus... 122 5e-26
dbj|BAK03897.1| predicted protein [Hordeum vulgare subsp. vulgare] 122 5e-26
ref|XP_003563953.1| PREDICTED: uncharacterized protein LOC100828... 121 1e-25
gb|ACF22720.1| PHD finger family [Brachypodium distachyon] 121 1e-25
gb|AFW86355.1| hypothetical protein ZEAMMB73_340557 [Zea mays] 120 3e-25
gb|ACN34058.1| unknown [Zea mays] 120 3e-25
ref|NP_001151466.1| PHD-finger family protein [Zea mays] gi|1956... 120 3e-25
>ref|XP_002273302.1| PREDICTED: uncharacterized protein LOC100266325 [Vitis vinifera]
gi|297734114|emb|CBI15361.3| unnamed protein product
[Vitis vinifera]
Length = 648
Score = 153 bits (386), Expect = 3e-35
Identities = 64/81 (79%), Positives = 73/81 (90%)
Frame = +1
Query: 55 ESNICGICFSEDGKAIRGWIDCCNHYFCFICIMEWAKVESRCPMCKQRFSTIRRPPKYGI 234
+SN CGIC ED +AIRGW+D C+HYFCF+CIMEWAKVESRCPMCK+RFSTIRRPPK G+
Sbjct: 49 DSNCCGICLLEDDRAIRGWVDSCDHYFCFVCIMEWAKVESRCPMCKRRFSTIRRPPKPGV 108
Query: 235 FPNERIVNVPVRDQIWHPFGN 297
FP+ERIVNVPVRDQ +H FGN
Sbjct: 109 FPSERIVNVPVRDQAYHHFGN 129
>ref|XP_002514596.1| splicing factor, arginine/serine-rich 2,rnap interacting protein,
putative [Ricinus communis] gi|223546200|gb|EEF47702.1|
splicing factor, arginine/serine-rich 2,rnap interacting
protein, putative [Ricinus communis]
Length = 632
Score = 141 bits (356), Expect = 8e-32
Identities = 63/92 (68%), Positives = 76/92 (82%), Gaps = 2/92 (2%)
Frame = +1
Query: 28 GNDVTDAKS--ESNICGICFSEDGKAIRGWIDCCNHYFCFICIMEWAKVESRCPMCKQRF 201
GN +T +S ES ICGIC SE+ A+RG ID C+HYFCFICIMEWAK+ESRCPMCK+RF
Sbjct: 33 GNRLTPMESTGESLICGICLSENWSAMRGQIDSCDHYFCFICIMEWAKIESRCPMCKRRF 92
Query: 202 STIRRPPKYGIFPNERIVNVPVRDQIWHPFGN 297
+ I RPPK G+FP+ER+VNVP RDQ++H FGN
Sbjct: 93 NNIHRPPKDGVFPSERLVNVPKRDQVYHLFGN 124
>ref|XP_006354741.1| PREDICTED: PHD and RING finger domain-containing protein
C126.07c-like [Solanum tuberosum]
Length = 650
Score = 140 bits (353), Expect = 2e-31
Identities = 60/91 (65%), Positives = 77/91 (84%), Gaps = 3/91 (3%)
Frame = +1
Query: 34 DVTDAKSESNICGICFSEDGKA---IRGWIDCCNHYFCFICIMEWAKVESRCPMCKQRFS 204
+++D+++ESN CGIC +E G IRG IDCC+HYFCF+CI+EW+KVESRCPMCK+RFS
Sbjct: 42 ELSDSETESNCCGICLTETGHGTTIIRGVIDCCDHYFCFVCIIEWSKVESRCPMCKRRFS 101
Query: 205 TIRRPPKYGIFPNERIVNVPVRDQIWHPFGN 297
IRRPP+ IFP+ER+VNVPVRDQ++H GN
Sbjct: 102 IIRRPPRPPIFPSERVVNVPVRDQVYHCHGN 132
>ref|XP_004241616.1| PREDICTED: uncharacterized protein LOC101264529 [Solanum
lycopersicum]
Length = 650
Score = 133 bits (334), Expect = 3e-29
Identities = 57/91 (62%), Positives = 74/91 (81%), Gaps = 3/91 (3%)
Frame = +1
Query: 34 DVTDAKSESNICGICFSEDGKA---IRGWIDCCNHYFCFICIMEWAKVESRCPMCKQRFS 204
++++ ++E + CGIC +E G IRG IDCCNHYFCF+CI+EW+KVESRCPMCK+RFS
Sbjct: 42 ELSNLETEQDCCGICLTETGHGTTIIRGVIDCCNHYFCFVCIIEWSKVESRCPMCKRRFS 101
Query: 205 TIRRPPKYGIFPNERIVNVPVRDQIWHPFGN 297
IRRP + IFP+ER+VNVPVRDQ++H GN
Sbjct: 102 IIRRPARPPIFPSERVVNVPVRDQVYHCHGN 132
>ref|XP_007037677.1| RING/U-box protein, putative isoform 1 [Theobroma cacao]
gi|508774922|gb|EOY22178.1| RING/U-box protein, putative
isoform 1 [Theobroma cacao]
Length = 679
Score = 130 bits (326), Expect = 2e-28
Identities = 56/86 (65%), Positives = 71/86 (82%), Gaps = 1/86 (1%)
Frame = +1
Query: 43 DAKSESNICGICFSEDGK-AIRGWIDCCNHYFCFICIMEWAKVESRCPMCKQRFSTIRRP 219
D S+S+ CGIC S+ G+ AIRG ID C+H+FCF+CIMEWAKVESRCPMCK+RF+ IRRP
Sbjct: 44 DDDSDSDKCGICLSDGGRRAIRGKIDSCDHFFCFVCIMEWAKVESRCPMCKRRFTAIRRP 103
Query: 220 PKYGIFPNERIVNVPVRDQIWHPFGN 297
PK +F +ER+VN+P RDQ++H GN
Sbjct: 104 PKEAVFTSERVVNIPQRDQVYHLCGN 129
>ref|XP_006485719.1| PREDICTED: uncharacterized protein LOC102630473 [Citrus sinensis]
Length = 673
Score = 129 bits (324), Expect = 4e-28
Identities = 54/79 (68%), Positives = 66/79 (83%)
Frame = +1
Query: 58 SNICGICFSEDGKAIRGWIDCCNHYFCFICIMEWAKVESRCPMCKQRFSTIRRPPKYGIF 237
S CGIC ++GK+IRG ID C+HYFCF+CIMEWAK+ES+CPMCK+RF++IRRPPK G+F
Sbjct: 6 SRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSIRRPPKDGVF 65
Query: 238 PNERIVNVPVRDQIWHPFG 294
P ER V VP RDQI+ FG
Sbjct: 66 PRERFVVVPKRDQIYGGFG 84
>ref|XP_006440830.1| hypothetical protein CICLE_v10019179mg [Citrus clementina]
gi|557543092|gb|ESR54070.1| hypothetical protein
CICLE_v10019179mg [Citrus clementina]
Length = 669
Score = 129 bits (324), Expect = 4e-28
Identities = 54/79 (68%), Positives = 66/79 (83%)
Frame = +1
Query: 58 SNICGICFSEDGKAIRGWIDCCNHYFCFICIMEWAKVESRCPMCKQRFSTIRRPPKYGIF 237
S CGIC ++GK+IRG ID C+HYFCF+CIMEWAK+ES+CPMCK+RF++IRRPPK G+F
Sbjct: 6 SRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSIRRPPKDGVF 65
Query: 238 PNERIVNVPVRDQIWHPFG 294
P ER V VP RDQI+ FG
Sbjct: 66 PRERFVVVPKRDQIYGGFG 84
>ref|XP_004965231.1| PREDICTED: uncharacterized protein LOC101772949 [Setaria italica]
Length = 744
Score = 128 bits (322), Expect = 7e-28
Identities = 54/89 (60%), Positives = 67/89 (75%)
Frame = +1
Query: 31 NDVTDAKSESNICGICFSEDGKAIRGWIDCCNHYFCFICIMEWAKVESRCPMCKQRFSTI 210
+D +A S +CGIC+ + +AIRG +DCC HYFCF+CIM W +VESRCP CK RF TI
Sbjct: 25 DDEAEADSSGKMCGICYVDGRQAIRGELDCCAHYFCFVCIMAWGRVESRCPFCKARFRTI 84
Query: 211 RRPPKYGIFPNERIVNVPVRDQIWHPFGN 297
RRPP G FP+ERIV VP R+Q++HP GN
Sbjct: 85 RRPPVPGRFPDERIVTVPERNQVYHPQGN 113
>ref|XP_004508644.1| PREDICTED: uncharacterized protein LOC101504311 [Cicer arietinum]
Length = 611
Score = 127 bits (320), Expect = 1e-27
Identities = 55/99 (55%), Positives = 74/99 (74%)
Frame = +1
Query: 1 KEKIEQIEDGNDVTDAKSESNICGICFSEDGKAIRGWIDCCNHYFCFICIMEWAKVESRC 180
K ++E +D +D ++ + CGIC+ E G +I G ID CNHYFCF+CIMEWAK ESRC
Sbjct: 13 KSEVEANKDDDD----DNQDDCCGICYVERGVSIPGEIDSCNHYFCFVCIMEWAKHESRC 68
Query: 181 PMCKQRFSTIRRPPKYGIFPNERIVNVPVRDQIWHPFGN 297
P+C+QRFS +RR PK+G+F + R V VP+RDQ++HP GN
Sbjct: 69 PICRQRFSNVRRLPKHGLFSSSRDVKVPLRDQVYHPHGN 107
>gb|EXB89099.1| PHD and RING finger domain-containing protein 1 [Morus notabilis]
Length = 654
Score = 127 bits (318), Expect = 2e-27
Identities = 57/88 (64%), Positives = 69/88 (78%), Gaps = 1/88 (1%)
Frame = +1
Query: 16 QIEDGNDVTDAK-SESNICGICFSEDGKAIRGWIDCCNHYFCFICIMEWAKVESRCPMCK 192
++ED N A+ S S C ICF ED KAIRG IDCC+HYFCF+CIMEW+K ESRCPMC+
Sbjct: 32 KLEDENQAPVAENSASRNCAICFLEDVKAIRGEIDCCDHYFCFLCIMEWSKTESRCPMCR 91
Query: 193 QRFSTIRRPPKYGIFPNERIVNVPVRDQ 276
+RF+ IRRPPK G+F ER++ VPVRDQ
Sbjct: 92 RRFAAIRRPPKDGVFACERMIKVPVRDQ 119
>gb|AGH18689.1| PHD-finger family protein [Triticum monococcum]
Length = 939
Score = 125 bits (314), Expect = 6e-27
Identities = 54/94 (57%), Positives = 69/94 (73%)
Frame = +1
Query: 16 QIEDGNDVTDAKSESNICGICFSEDGKAIRGWIDCCNHYFCFICIMEWAKVESRCPMCKQ 195
+++D + A E CGICF++ +AIRG +DCC H+FCF+CIM WA+VESRCP CK
Sbjct: 21 RMDDDAEAVAAAPEGVPCGICFTDSRRAIRGELDCCAHHFCFVCIMAWARVESRCPFCKA 80
Query: 196 RFSTIRRPPKYGIFPNERIVNVPVRDQIWHPFGN 297
RF TIRRPP G P+ERIVNV R+Q++HP GN
Sbjct: 81 RFHTIRRPPVPGRLPSERIVNVAERNQVYHPRGN 114
>ref|XP_002436876.1| hypothetical protein SORBIDRAFT_10g010430 [Sorghum bicolor]
gi|241915099|gb|EER88243.1| hypothetical protein
SORBIDRAFT_10g010430 [Sorghum bicolor]
Length = 776
Score = 124 bits (310), Expect = 2e-26
Identities = 51/89 (57%), Positives = 68/89 (76%)
Frame = +1
Query: 31 NDVTDAKSESNICGICFSEDGKAIRGWIDCCNHYFCFICIMEWAKVESRCPMCKQRFSTI 210
+D +A+ +CGIC+ + +AIRG +DCC H+FCF+CIM W +VESRCP CK RF TI
Sbjct: 26 DDDVEAEGAEKMCGICYVDGRRAIRGELDCCAHFFCFVCIMAWGRVESRCPFCKARFRTI 85
Query: 211 RRPPKYGIFPNERIVNVPVRDQIWHPFGN 297
RRPP G FP+ERIV+VP R+Q+++P GN
Sbjct: 86 RRPPVAGRFPDERIVSVPERNQVYNPQGN 114
>ref|XP_004301094.1| PREDICTED: uncharacterized protein LOC101292906 [Fragaria vesca
subsp. vesca]
Length = 1002
Score = 123 bits (309), Expect = 2e-26
Identities = 50/70 (71%), Positives = 60/70 (85%)
Frame = +1
Query: 67 CGICFSEDGKAIRGWIDCCNHYFCFICIMEWAKVESRCPMCKQRFSTIRRPPKYGIFPNE 246
C ICF +DGKA RG IDCC+HYFCF+CI EWAK ESRCP+C++RF++IRRPPK G+F E
Sbjct: 45 CAICFLDDGKAARGKIDCCDHYFCFLCIKEWAKTESRCPICRRRFNSIRRPPKVGVFVRE 104
Query: 247 RIVNVPVRDQ 276
R+V VPVRDQ
Sbjct: 105 RVVKVPVRDQ 114
>gb|EYU38152.1| hypothetical protein MIMGU_mgv1a003288mg [Mimulus guttatus]
Length = 594
Score = 122 bits (306), Expect = 5e-26
Identities = 60/101 (59%), Positives = 72/101 (71%), Gaps = 2/101 (1%)
Frame = +1
Query: 1 KEKIEQIEDGNDVTDAKSESNICGICFSEDGKA--IRGWIDCCNHYFCFICIMEWAKVES 174
K KIE+ E N+ D CGIC SE G IRG++D C+HYFCF+CIMEWAKVES
Sbjct: 32 KSKIEE-EVENESADC------CGICLSEAGNGGIIRGYVDSCDHYFCFVCIMEWAKVES 84
Query: 175 RCPMCKQRFSTIRRPPKYGIFPNERIVNVPVRDQIWHPFGN 297
+CP CK+RFSTIRRP K +F +ER+V VPVRDQ +H GN
Sbjct: 85 KCPFCKRRFSTIRRPRKPPVFTSERLVQVPVRDQAYHYSGN 125
>dbj|BAK03897.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 948
Score = 122 bits (306), Expect = 5e-26
Identities = 51/77 (66%), Positives = 62/77 (80%)
Frame = +1
Query: 67 CGICFSEDGKAIRGWIDCCNHYFCFICIMEWAKVESRCPMCKQRFSTIRRPPKYGIFPNE 246
CGICF++ +AIRG +DCC H+FCF+CIM WA+VESRCP CK RF TIRRPP G P+E
Sbjct: 40 CGICFTDSRRAIRGELDCCAHHFCFVCIMAWARVESRCPFCKARFHTIRRPPVPGRLPSE 99
Query: 247 RIVNVPVRDQIWHPFGN 297
RIVNV R+Q++HP GN
Sbjct: 100 RIVNVAERNQVYHPRGN 116
>ref|XP_003563953.1| PREDICTED: uncharacterized protein LOC100828773 [Brachypodium
distachyon]
Length = 726
Score = 121 bits (303), Expect = 1e-25
Identities = 50/82 (60%), Positives = 64/82 (78%)
Frame = +1
Query: 52 SESNICGICFSEDGKAIRGWIDCCNHYFCFICIMEWAKVESRCPMCKQRFSTIRRPPKYG 231
+E +CGIC ++ +AIRG +DCC H+FCF+CIM WA+VESRCP CK RF TIRRPP G
Sbjct: 30 AEGVLCGICLTDSRRAIRGELDCCAHHFCFVCIMAWARVESRCPFCKARFRTIRRPPVPG 89
Query: 232 IFPNERIVNVPVRDQIWHPFGN 297
FP+ER+V V R+Q++HP GN
Sbjct: 90 RFPSERLVTVAERNQVYHPRGN 111
>gb|ACF22720.1| PHD finger family [Brachypodium distachyon]
Length = 748
Score = 121 bits (303), Expect = 1e-25
Identities = 50/82 (60%), Positives = 64/82 (78%)
Frame = +1
Query: 52 SESNICGICFSEDGKAIRGWIDCCNHYFCFICIMEWAKVESRCPMCKQRFSTIRRPPKYG 231
+E +CGIC ++ +AIRG +DCC H+FCF+CIM WA+VESRCP CK RF TIRRPP G
Sbjct: 30 AEGVLCGICLTDSRRAIRGELDCCAHHFCFVCIMAWARVESRCPFCKARFRTIRRPPVPG 89
Query: 232 IFPNERIVNVPVRDQIWHPFGN 297
FP+ER+V V R+Q++HP GN
Sbjct: 90 RFPSERLVTVAERNQVYHPRGN 111
>gb|AFW86355.1| hypothetical protein ZEAMMB73_340557 [Zea mays]
Length = 661
Score = 120 bits (300), Expect = 3e-25
Identities = 49/91 (53%), Positives = 66/91 (72%)
Frame = +1
Query: 25 DGNDVTDAKSESNICGICFSEDGKAIRGWIDCCNHYFCFICIMEWAKVESRCPMCKQRFS 204
D + +A+ +CGIC+ + +AIRG +DCC H+FCF+CIM W +VESRCP C+ RF
Sbjct: 25 DEEEEDEAEGAEKMCGICYLDGRRAIRGELDCCAHFFCFVCIMAWGRVESRCPFCRARFH 84
Query: 205 TIRRPPKYGIFPNERIVNVPVRDQIWHPFGN 297
TIRRPP G FP+ERIV++ R+Q+ HP GN
Sbjct: 85 TIRRPPVAGRFPDERIVSIQERNQVHHPQGN 115
>gb|ACN34058.1| unknown [Zea mays]
Length = 638
Score = 120 bits (300), Expect = 3e-25
Identities = 49/91 (53%), Positives = 66/91 (72%)
Frame = +1
Query: 25 DGNDVTDAKSESNICGICFSEDGKAIRGWIDCCNHYFCFICIMEWAKVESRCPMCKQRFS 204
D + +A+ +CGIC+ + +AIRG +DCC H+FCF+CIM W +VESRCP C+ RF
Sbjct: 2 DEEEEDEAEGAEKMCGICYLDGRRAIRGELDCCAHFFCFVCIMAWGRVESRCPFCRARFH 61
Query: 205 TIRRPPKYGIFPNERIVNVPVRDQIWHPFGN 297
TIRRPP G FP+ERIV++ R+Q+ HP GN
Sbjct: 62 TIRRPPVAGRFPDERIVSIQERNQVHHPQGN 92
>ref|NP_001151466.1| PHD-finger family protein [Zea mays] gi|195646974|gb|ACG42955.1|
PHD-finger family protein [Zea mays]
gi|413953705|gb|AFW86354.1| PHD-finger family protein
[Zea mays]
Length = 733
Score = 120 bits (300), Expect = 3e-25
Identities = 49/91 (53%), Positives = 66/91 (72%)
Frame = +1
Query: 25 DGNDVTDAKSESNICGICFSEDGKAIRGWIDCCNHYFCFICIMEWAKVESRCPMCKQRFS 204
D + +A+ +CGIC+ + +AIRG +DCC H+FCF+CIM W +VESRCP C+ RF
Sbjct: 25 DEEEEDEAEGAEKMCGICYLDGRRAIRGELDCCAHFFCFVCIMAWGRVESRCPFCRARFH 84
Query: 205 TIRRPPKYGIFPNERIVNVPVRDQIWHPFGN 297
TIRRPP G FP+ERIV++ R+Q+ HP GN
Sbjct: 85 TIRRPPVAGRFPDERIVSIQERNQVHHPQGN 115