BLASTX nr result
ID: Cocculus23_contig00033320
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00033320
(335 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007037508.1| RNA helicase family protein isoform 3 [Theob... 159 4e-37
ref|XP_007037507.1| RNA helicase family protein isoform 2 [Theob... 159 4e-37
ref|XP_007037506.1| RNA helicase family protein isoform 1 [Theob... 159 4e-37
gb|EXC33541.1| Putative pre-mRNA-splicing factor ATP-dependent R... 159 5e-37
dbj|BAK01849.1| predicted protein [Hordeum vulgare subsp. vulgare] 159 5e-37
ref|XP_006477633.1| PREDICTED: putative pre-mRNA-splicing factor... 158 7e-37
ref|XP_006440706.1| hypothetical protein CICLE_v10019101mg [Citr... 158 7e-37
ref|XP_003557821.1| PREDICTED: putative pre-mRNA-splicing factor... 158 7e-37
ref|XP_006582003.1| PREDICTED: putative pre-mRNA-splicing factor... 157 1e-36
ref|XP_004961277.1| PREDICTED: putative pre-mRNA-splicing factor... 157 2e-36
ref|XP_006659312.1| PREDICTED: putative pre-mRNA-splicing factor... 156 3e-36
emb|CBI15151.3| unnamed protein product [Vitis vinifera] 156 3e-36
ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor... 156 3e-36
ref|XP_004299319.1| PREDICTED: putative pre-mRNA-splicing factor... 155 4e-36
gb|AFW61762.1| putative RNA helicase family protein [Zea mays] 155 4e-36
ref|NP_001169964.1| uncharacterized protein LOC100383864 [Zea ma... 155 4e-36
gb|EPS58550.1| hypothetical protein M569_16263, partial [Genlise... 155 6e-36
ref|XP_002457621.1| hypothetical protein SORBIDRAFT_03g010540 [S... 155 6e-36
gb|EYU23572.1| hypothetical protein MIMGU_mgv1a000639mg [Mimulus... 154 9e-36
ref|XP_006374093.1| RNA helicase family protein [Populus trichoc... 154 9e-36
>ref|XP_007037508.1| RNA helicase family protein isoform 3 [Theobroma cacao]
gi|508774753|gb|EOY22009.1| RNA helicase family protein
isoform 3 [Theobroma cacao]
Length = 924
Score = 159 bits (402), Expect = 4e-37
Identities = 75/89 (84%), Positives = 82/89 (92%)
Frame = -1
Query: 332 NDLEGIKKAITSGFFYHAARLQKCGAYTTVKNPLAVHIHPSSGLAQVLPRWAVYHELVLT 153
NDLE IKKAITSGFF H+ARLQK G+Y TVK+P V+IHPSSGLAQVLPRW VYHELVLT
Sbjct: 818 NDLEAIKKAITSGFFPHSARLQKNGSYRTVKHPQTVYIHPSSGLAQVLPRWVVYHELVLT 877
Query: 152 TKEYMRQVTELKPEWLVDIAPHYYQMKDL 66
TKEYMRQVTELKP+WLV+IAPHYYQMKD+
Sbjct: 878 TKEYMRQVTELKPDWLVEIAPHYYQMKDV 906
>ref|XP_007037507.1| RNA helicase family protein isoform 2 [Theobroma cacao]
gi|508774752|gb|EOY22008.1| RNA helicase family protein
isoform 2 [Theobroma cacao]
Length = 1055
Score = 159 bits (402), Expect = 4e-37
Identities = 75/89 (84%), Positives = 82/89 (92%)
Frame = -1
Query: 332 NDLEGIKKAITSGFFYHAARLQKCGAYTTVKNPLAVHIHPSSGLAQVLPRWAVYHELVLT 153
NDLE IKKAITSGFF H+ARLQK G+Y TVK+P V+IHPSSGLAQVLPRW VYHELVLT
Sbjct: 949 NDLEAIKKAITSGFFPHSARLQKNGSYRTVKHPQTVYIHPSSGLAQVLPRWVVYHELVLT 1008
Query: 152 TKEYMRQVTELKPEWLVDIAPHYYQMKDL 66
TKEYMRQVTELKP+WLV+IAPHYYQMKD+
Sbjct: 1009 TKEYMRQVTELKPDWLVEIAPHYYQMKDV 1037
>ref|XP_007037506.1| RNA helicase family protein isoform 1 [Theobroma cacao]
gi|508774751|gb|EOY22007.1| RNA helicase family protein
isoform 1 [Theobroma cacao]
Length = 1054
Score = 159 bits (402), Expect = 4e-37
Identities = 75/89 (84%), Positives = 82/89 (92%)
Frame = -1
Query: 332 NDLEGIKKAITSGFFYHAARLQKCGAYTTVKNPLAVHIHPSSGLAQVLPRWAVYHELVLT 153
NDLE IKKAITSGFF H+ARLQK G+Y TVK+P V+IHPSSGLAQVLPRW VYHELVLT
Sbjct: 949 NDLEAIKKAITSGFFPHSARLQKNGSYRTVKHPQTVYIHPSSGLAQVLPRWVVYHELVLT 1008
Query: 152 TKEYMRQVTELKPEWLVDIAPHYYQMKDL 66
TKEYMRQVTELKP+WLV+IAPHYYQMKD+
Sbjct: 1009 TKEYMRQVTELKPDWLVEIAPHYYQMKDV 1037
>gb|EXC33541.1| Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
[Morus notabilis]
Length = 1043
Score = 159 bits (401), Expect = 5e-37
Identities = 74/89 (83%), Positives = 81/89 (91%)
Frame = -1
Query: 332 NDLEGIKKAITSGFFYHAARLQKCGAYTTVKNPLAVHIHPSSGLAQVLPRWAVYHELVLT 153
NDLE IKK+ITSGFF H+ RLQK G+Y TVK+P VHIHPSSGLAQVLPRW VYHELVLT
Sbjct: 939 NDLEAIKKSITSGFFPHSGRLQKNGSYRTVKHPQTVHIHPSSGLAQVLPRWVVYHELVLT 998
Query: 152 TKEYMRQVTELKPEWLVDIAPHYYQMKDL 66
TKEYMRQVTELKPEWLV+IAPHYYQ+KD+
Sbjct: 999 TKEYMRQVTELKPEWLVEIAPHYYQLKDV 1027
>dbj|BAK01849.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1046
Score = 159 bits (401), Expect = 5e-37
Identities = 73/90 (81%), Positives = 83/90 (92%)
Frame = -1
Query: 335 ANDLEGIKKAITSGFFYHAARLQKCGAYTTVKNPLAVHIHPSSGLAQVLPRWAVYHELVL 156
A+DL+ IKKAITSGFF+H+ARLQK G+Y TVKNP V IHPSSGLAQ+LPRW +YHELVL
Sbjct: 940 ASDLDAIKKAITSGFFHHSARLQKNGSYRTVKNPQTVFIHPSSGLAQLLPRWVIYHELVL 999
Query: 155 TTKEYMRQVTELKPEWLVDIAPHYYQMKDL 66
TTKEYMRQVTELKPEWLV+IAPHYYQ+KD+
Sbjct: 1000 TTKEYMRQVTELKPEWLVEIAPHYYQLKDV 1029
>ref|XP_006477633.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like [Citrus sinensis]
Length = 1051
Score = 158 bits (400), Expect = 7e-37
Identities = 74/89 (83%), Positives = 82/89 (92%)
Frame = -1
Query: 332 NDLEGIKKAITSGFFYHAARLQKCGAYTTVKNPLAVHIHPSSGLAQVLPRWAVYHELVLT 153
NDL+ IKKAITSGFF H+A+LQK G+Y TVK+P VHIHPSSGLAQVLPRW VYHELVLT
Sbjct: 946 NDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVYHELVLT 1005
Query: 152 TKEYMRQVTELKPEWLVDIAPHYYQMKDL 66
TKEYMRQVTELKPEWLV+IAPHYYQ+KD+
Sbjct: 1006 TKEYMRQVTELKPEWLVEIAPHYYQLKDV 1034
>ref|XP_006440706.1| hypothetical protein CICLE_v10019101mg [Citrus clementina]
gi|557542968|gb|ESR53946.1| hypothetical protein
CICLE_v10019101mg [Citrus clementina]
Length = 700
Score = 158 bits (400), Expect = 7e-37
Identities = 74/89 (83%), Positives = 82/89 (92%)
Frame = -1
Query: 332 NDLEGIKKAITSGFFYHAARLQKCGAYTTVKNPLAVHIHPSSGLAQVLPRWAVYHELVLT 153
NDL+ IKKAITSGFF H+A+LQK G+Y TVK+P VHIHPSSGLAQVLPRW VYHELVLT
Sbjct: 595 NDLDAIKKAITSGFFPHSAKLQKNGSYWTVKHPQRVHIHPSSGLAQVLPRWVVYHELVLT 654
Query: 152 TKEYMRQVTELKPEWLVDIAPHYYQMKDL 66
TKEYMRQVTELKPEWLV+IAPHYYQ+KD+
Sbjct: 655 TKEYMRQVTELKPEWLVEIAPHYYQLKDV 683
>ref|XP_003557821.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like [Brachypodium distachyon]
Length = 1051
Score = 158 bits (400), Expect = 7e-37
Identities = 72/90 (80%), Positives = 83/90 (92%)
Frame = -1
Query: 335 ANDLEGIKKAITSGFFYHAARLQKCGAYTTVKNPLAVHIHPSSGLAQVLPRWAVYHELVL 156
A+DL+ IKKAITSGFF+H+ARLQK G+Y TVKNP V +HPSSGLAQ+LPRW +YHELVL
Sbjct: 945 ASDLDAIKKAITSGFFHHSARLQKNGSYRTVKNPQTVFVHPSSGLAQLLPRWVIYHELVL 1004
Query: 155 TTKEYMRQVTELKPEWLVDIAPHYYQMKDL 66
TTKEYMRQVTELKPEWLV+IAPHYYQ+KD+
Sbjct: 1005 TTKEYMRQVTELKPEWLVEIAPHYYQLKDV 1034
>ref|XP_006582003.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16 [Glycine max]
Length = 1046
Score = 157 bits (398), Expect = 1e-36
Identities = 74/90 (82%), Positives = 82/90 (91%)
Frame = -1
Query: 335 ANDLEGIKKAITSGFFYHAARLQKCGAYTTVKNPLAVHIHPSSGLAQVLPRWAVYHELVL 156
ANDL+ IKK+ITSGFF H+ARLQK G+Y TVK+ VHIHPSSGLAQVLPRW VYHELVL
Sbjct: 941 ANDLDAIKKSITSGFFPHSARLQKNGSYRTVKHSQTVHIHPSSGLAQVLPRWVVYHELVL 1000
Query: 155 TTKEYMRQVTELKPEWLVDIAPHYYQMKDL 66
TTKEYMRQVTELKPEWLV+IAPHYYQ+KD+
Sbjct: 1001 TTKEYMRQVTELKPEWLVEIAPHYYQLKDV 1030
>ref|XP_004961277.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like [Setaria italica]
Length = 1051
Score = 157 bits (396), Expect = 2e-36
Identities = 71/90 (78%), Positives = 82/90 (91%)
Frame = -1
Query: 335 ANDLEGIKKAITSGFFYHAARLQKCGAYTTVKNPLAVHIHPSSGLAQVLPRWAVYHELVL 156
A+DL+ IKKAITSGFF+H+ARLQ+ G Y TVKNP VHIHPSSGLA++ PRW VYHELVL
Sbjct: 945 ASDLDAIKKAITSGFFHHSARLQRDGTYKTVKNPQTVHIHPSSGLAEIRPRWVVYHELVL 1004
Query: 155 TTKEYMRQVTELKPEWLVDIAPHYYQMKDL 66
TTKE+MRQVTELKPEWLV+IAPHYYQ+KD+
Sbjct: 1005 TTKEFMRQVTELKPEWLVEIAPHYYQLKDV 1034
>ref|XP_006659312.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like [Oryza brachyantha]
Length = 1052
Score = 156 bits (394), Expect = 3e-36
Identities = 72/90 (80%), Positives = 82/90 (91%)
Frame = -1
Query: 335 ANDLEGIKKAITSGFFYHAARLQKCGAYTTVKNPLAVHIHPSSGLAQVLPRWAVYHELVL 156
A+DL+ IKKAITSGFF+H+ARLQK G+Y TVKNP V IHPSSGLAQVLPRW +YHELVL
Sbjct: 946 ASDLDAIKKAITSGFFHHSARLQKNGSYRTVKNPQTVFIHPSSGLAQVLPRWVIYHELVL 1005
Query: 155 TTKEYMRQVTELKPEWLVDIAPHYYQMKDL 66
TTKEYMRQVTELKP+WL +IAPHYYQ+KD+
Sbjct: 1006 TTKEYMRQVTELKPDWLGEIAPHYYQLKDV 1035
>emb|CBI15151.3| unnamed protein product [Vitis vinifera]
Length = 954
Score = 156 bits (394), Expect = 3e-36
Identities = 71/89 (79%), Positives = 82/89 (92%)
Frame = -1
Query: 332 NDLEGIKKAITSGFFYHAARLQKCGAYTTVKNPLAVHIHPSSGLAQVLPRWAVYHELVLT 153
NDL+ IKK+IT+GFF H+ARLQK G+Y TVK+P VHIHPSSGLAQVLPRW +YHELVLT
Sbjct: 848 NDLDAIKKSITAGFFPHSARLQKNGSYRTVKHPQTVHIHPSSGLAQVLPRWVIYHELVLT 907
Query: 152 TKEYMRQVTELKPEWLVDIAPHYYQMKDL 66
TKEYMRQVTELKPEWLV+IAPH+YQ+KD+
Sbjct: 908 TKEYMRQVTELKPEWLVEIAPHFYQLKDV 936
>ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like [Vitis vinifera]
Length = 1056
Score = 156 bits (394), Expect = 3e-36
Identities = 71/89 (79%), Positives = 82/89 (92%)
Frame = -1
Query: 332 NDLEGIKKAITSGFFYHAARLQKCGAYTTVKNPLAVHIHPSSGLAQVLPRWAVYHELVLT 153
NDL+ IKK+IT+GFF H+ARLQK G+Y TVK+P VHIHPSSGLAQVLPRW +YHELVLT
Sbjct: 950 NDLDAIKKSITAGFFPHSARLQKNGSYRTVKHPQTVHIHPSSGLAQVLPRWVIYHELVLT 1009
Query: 152 TKEYMRQVTELKPEWLVDIAPHYYQMKDL 66
TKEYMRQVTELKPEWLV+IAPH+YQ+KD+
Sbjct: 1010 TKEYMRQVTELKPEWLVEIAPHFYQLKDV 1038
>ref|XP_004299319.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16-like [Fragaria vesca subsp. vesca]
Length = 1042
Score = 155 bits (393), Expect = 4e-36
Identities = 72/88 (81%), Positives = 80/88 (90%)
Frame = -1
Query: 329 DLEGIKKAITSGFFYHAARLQKCGAYTTVKNPLAVHIHPSSGLAQVLPRWAVYHELVLTT 150
D E IKKAITSGFF H++RLQK GAY TVK+P VHIHPSSGL+QVLPRW +YHELVLTT
Sbjct: 939 DFEVIKKAITSGFFPHSSRLQKSGAYRTVKHPQTVHIHPSSGLSQVLPRWVIYHELVLTT 998
Query: 149 KEYMRQVTELKPEWLVDIAPHYYQMKDL 66
KEYMRQVTELKPEWLV+IAPHYYQ+KD+
Sbjct: 999 KEYMRQVTELKPEWLVEIAPHYYQLKDV 1026
>gb|AFW61762.1| putative RNA helicase family protein [Zea mays]
Length = 639
Score = 155 bits (393), Expect = 4e-36
Identities = 71/89 (79%), Positives = 81/89 (91%)
Frame = -1
Query: 332 NDLEGIKKAITSGFFYHAARLQKCGAYTTVKNPLAVHIHPSSGLAQVLPRWAVYHELVLT 153
+DL+ IKKAITSGFF+H+ARLQ+ G Y TVKNP VHIHPSSGLA+V PRW VYHELVLT
Sbjct: 534 SDLDAIKKAITSGFFHHSARLQRDGTYKTVKNPQTVHIHPSSGLAEVRPRWVVYHELVLT 593
Query: 152 TKEYMRQVTELKPEWLVDIAPHYYQMKDL 66
TKE+MRQVTELKPEWLV+IAPHYYQ+KD+
Sbjct: 594 TKEFMRQVTELKPEWLVEIAPHYYQLKDV 622
>ref|NP_001169964.1| uncharacterized protein LOC100383864 [Zea mays]
gi|224032607|gb|ACN35379.1| unknown [Zea mays]
Length = 335
Score = 155 bits (393), Expect = 4e-36
Identities = 71/89 (79%), Positives = 81/89 (91%)
Frame = -1
Query: 332 NDLEGIKKAITSGFFYHAARLQKCGAYTTVKNPLAVHIHPSSGLAQVLPRWAVYHELVLT 153
+DL+ IKKAITSGFF+H+ARLQ+ G Y TVKNP VHIHPSSGLA+V PRW VYHELVLT
Sbjct: 230 SDLDAIKKAITSGFFHHSARLQRDGTYKTVKNPQTVHIHPSSGLAEVRPRWVVYHELVLT 289
Query: 152 TKEYMRQVTELKPEWLVDIAPHYYQMKDL 66
TKE+MRQVTELKPEWLV+IAPHYYQ+KD+
Sbjct: 290 TKEFMRQVTELKPEWLVEIAPHYYQLKDV 318
>gb|EPS58550.1| hypothetical protein M569_16263, partial [Genlisea aurea]
Length = 335
Score = 155 bits (392), Expect = 6e-36
Identities = 71/89 (79%), Positives = 80/89 (89%)
Frame = -1
Query: 332 NDLEGIKKAITSGFFYHAARLQKCGAYTTVKNPLAVHIHPSSGLAQVLPRWAVYHELVLT 153
NDL+GIKKAI SGFF H+A+LQK G+Y TVK+P VHIHPSSGL+QVLPRW +YHELVLT
Sbjct: 229 NDLDGIKKAIVSGFFPHSAKLQKNGSYRTVKHPQTVHIHPSSGLSQVLPRWTIYHELVLT 288
Query: 152 TKEYMRQVTELKPEWLVDIAPHYYQMKDL 66
TKEYMRQVTELKPEWL+DIAPHYYQ D+
Sbjct: 289 TKEYMRQVTELKPEWLLDIAPHYYQRNDV 317
>ref|XP_002457621.1| hypothetical protein SORBIDRAFT_03g010540 [Sorghum bicolor]
gi|241929596|gb|EES02741.1| hypothetical protein
SORBIDRAFT_03g010540 [Sorghum bicolor]
Length = 1046
Score = 155 bits (392), Expect = 6e-36
Identities = 70/90 (77%), Positives = 81/90 (90%)
Frame = -1
Query: 335 ANDLEGIKKAITSGFFYHAARLQKCGAYTTVKNPLAVHIHPSSGLAQVLPRWAVYHELVL 156
A+DL+ IKK ITSGFF+H+ARLQ+ G Y TVKNP VHIHPSSGLA++ PRW VYHELVL
Sbjct: 940 ASDLDAIKKVITSGFFHHSARLQRDGTYKTVKNPQTVHIHPSSGLAEIRPRWVVYHELVL 999
Query: 155 TTKEYMRQVTELKPEWLVDIAPHYYQMKDL 66
TTKE+MRQVTELKPEWLV+IAPHYYQ+KD+
Sbjct: 1000 TTKEFMRQVTELKPEWLVEIAPHYYQLKDV 1029
>gb|EYU23572.1| hypothetical protein MIMGU_mgv1a000639mg [Mimulus guttatus]
Length = 1035
Score = 154 bits (390), Expect = 9e-36
Identities = 69/89 (77%), Positives = 81/89 (91%)
Frame = -1
Query: 332 NDLEGIKKAITSGFFYHAARLQKCGAYTTVKNPLAVHIHPSSGLAQVLPRWAVYHELVLT 153
NDL+ +KKAIT+GFF H+ARLQ G+Y TVK+P VHIHPSSGLAQ+LPRW +YHELVLT
Sbjct: 929 NDLDPVKKAITAGFFPHSARLQNSGSYRTVKHPQTVHIHPSSGLAQLLPRWVIYHELVLT 988
Query: 152 TKEYMRQVTELKPEWLVDIAPHYYQMKDL 66
TKEYMRQVTELKPEWLV++APHYYQ+KD+
Sbjct: 989 TKEYMRQVTELKPEWLVELAPHYYQLKDV 1017
>ref|XP_006374093.1| RNA helicase family protein [Populus trichocarpa]
gi|550321716|gb|ERP51890.1| RNA helicase family protein
[Populus trichocarpa]
Length = 1057
Score = 154 bits (390), Expect = 9e-36
Identities = 71/89 (79%), Positives = 81/89 (91%)
Frame = -1
Query: 332 NDLEGIKKAITSGFFYHAARLQKCGAYTTVKNPLAVHIHPSSGLAQVLPRWAVYHELVLT 153
NDL+ IKK+ITSGFF H+ARLQK G+Y TVK+ VHIHPSSGL+QVLPRW +YHELVLT
Sbjct: 947 NDLDAIKKSITSGFFPHSARLQKNGSYKTVKHSQTVHIHPSSGLSQVLPRWVIYHELVLT 1006
Query: 152 TKEYMRQVTELKPEWLVDIAPHYYQMKDL 66
TKEYMRQVTELKP+WLV+IAPHYYQMKD+
Sbjct: 1007 TKEYMRQVTELKPDWLVEIAPHYYQMKDV 1035