BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00033305
         (353 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19832.3| unnamed protein product [Vitis vinifera]              158   7e-37
ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containi...   158   7e-37
ref|XP_006473595.1| PREDICTED: pentatricopeptide repeat-containi...   151   1e-34
ref|XP_004301492.1| PREDICTED: pentatricopeptide repeat-containi...   150   1e-34
ref|XP_006342194.1| PREDICTED: pentatricopeptide repeat-containi...   149   3e-34
ref|XP_006435103.1| hypothetical protein CICLE_v10000322mg [Citr...   149   5e-34
ref|XP_002302000.2| pentatricopeptide repeat-containing family p...   148   7e-34
gb|EXB53614.1| hypothetical protein L484_005164 [Morus notabilis]     146   3e-33
ref|XP_007034693.1| Pentatricopeptide repeat (PPR) superfamily p...   145   4e-33
ref|XP_004238467.1| PREDICTED: pentatricopeptide repeat-containi...   145   6e-33
ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containi...   142   4e-32
ref|XP_006415862.1| hypothetical protein EUTSA_v10006846mg [Eutr...   142   6e-32
ref|XP_006306802.1| hypothetical protein CARUB_v10008344mg [Caps...   141   1e-31
ref|XP_002893429.1| pentatricopeptide repeat-containing protein ...   141   1e-31
gb|EPS72239.1| hypothetical protein M569_02517, partial [Genlise...   140   2e-31
ref|NP_173907.1| pentatricopeptide repeat-containing protein [Ar...   140   2e-31
ref|XP_003590744.1| Pentatricopeptide repeat-containing protein ...   140   2e-31
ref|XP_002521664.1| pentatricopeptide repeat-containing protein,...   139   5e-31
ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containi...   138   7e-31
ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containi...   138   9e-31

>emb|CBI19832.3| unnamed protein product [Vitis vinifera]
          Length = 544

 Score =  158 bits (400), Expect = 7e-37
 Identities = 74/104 (71%), Positives = 89/104 (85%)
 Frame = -3

Query: 351 PRGHILNRLIDIYCKSRDITYARHLFDEILQPDIVARTTLIAAYSNAGDTKLARELFDAT 172
           PRG+ILNRLID+YCKS D+  A HLFDEI QPDIVARTTLIAA+S+AG++ LARE+F AT
Sbjct: 46  PRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSSAGNSNLAREIFFAT 105

Query: 171 PLRVRDTVSYNAMITGYSHNEDGFNAVKLYREMKQERFRPDTFT 40
           PL +RDTV YNAMITGYSHN DGF A++L+R++ +  FRPD FT
Sbjct: 106 PLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFT 149



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 9/109 (8%)
 Frame = -3

Query: 339 ILNRLIDIYCK---------SRDITYARHLFDEILQPDIVARTTLIAAYSNAGDTKLARE 187
           +LN L+ ++ K         S  +  AR LFDE+ + D ++ TT+IA Y   G+   AR+
Sbjct: 185 VLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQ 244

Query: 186 LFDATPLRVRDTVSYNAMITGYSHNEDGFNAVKLYREMKQERFRPDTFT 40
             D    ++   V++NAMI+GY H+     A++++R+M     + D FT
Sbjct: 245 FLDGMTEKL--VVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFT 291


>ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
           [Vitis vinifera]
          Length = 799

 Score =  158 bits (400), Expect = 7e-37
 Identities = 74/104 (71%), Positives = 89/104 (85%)
 Frame = -3

Query: 351 PRGHILNRLIDIYCKSRDITYARHLFDEILQPDIVARTTLIAAYSNAGDTKLARELFDAT 172
           PRG+ILNRLID+YCKS D+  A HLFDEI QPDIVARTTLIAA+S+AG++ LARE+F AT
Sbjct: 48  PRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSSAGNSNLAREIFFAT 107

Query: 171 PLRVRDTVSYNAMITGYSHNEDGFNAVKLYREMKQERFRPDTFT 40
           PL +RDTV YNAMITGYSHN DGF A++L+R++ +  FRPD FT
Sbjct: 108 PLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFT 151



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 9/109 (8%)
 Frame = -3

Query: 339 ILNRLIDIYCK---------SRDITYARHLFDEILQPDIVARTTLIAAYSNAGDTKLARE 187
           +LN L+ ++ K         S  +  AR LFDE+ + D ++ TT+IA Y   G+   AR+
Sbjct: 187 VLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQ 246

Query: 186 LFDATPLRVRDTVSYNAMITGYSHNEDGFNAVKLYREMKQERFRPDTFT 40
             D    ++   V++NAMI+GY H+     A++++R+M     + D FT
Sbjct: 247 FLDGMTEKL--VVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFT 293


>ref|XP_006473595.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like isoform X1 [Citrus sinensis]
           gi|568839239|ref|XP_006473596.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g25360-like isoform X2 [Citrus sinensis]
          Length = 799

 Score =  151 bits (381), Expect = 1e-34
 Identities = 71/104 (68%), Positives = 87/104 (83%)
 Frame = -3

Query: 351 PRGHILNRLIDIYCKSRDITYARHLFDEILQPDIVARTTLIAAYSNAGDTKLARELFDAT 172
           PR HI+NRLIDIYCKS  + YAR LFDEI QPDIVARTTLIAAYS +G+ KLARE+F+ T
Sbjct: 48  PREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAYSASGNVKLAREMFNKT 107

Query: 171 PLRVRDTVSYNAMITGYSHNEDGFNAVKLYREMKQERFRPDTFT 40
           PL++RDTV YNAMIT YSHN DG  A++L+R+M+++  +PD FT
Sbjct: 108 PLKMRDTVFYNAMITAYSHNSDGHAAIELFRDMRRDNVKPDNFT 151



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 29/94 (30%), Positives = 55/94 (58%)
 Frame = -3

Query: 333 NRLIDIYCKSRDITYARHLFDEILQPDIVARTTLIAAYSNAGDTKLARELFDATPLRVRD 154
           N L+ +Y K   +  AR +F+++ + D+V+   +++AY +AG    A+ LF    +R R+
Sbjct: 334 NALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFGT--MRERN 391

Query: 153 TVSYNAMITGYSHNEDGFNAVKLYREMKQERFRP 52
            +++  MI+G + N  G   +KL+ +M+ E F P
Sbjct: 392 LLTWTVMISGLAQNGYGEEGLKLFSQMRLEGFEP 425



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
 Frame = -3

Query: 339 ILNRLIDIYCKSRDITY---------ARHLFDEILQPDIVARTTLIAAYSNAGDTKLARE 187
           +LN LI +Y K     +         AR +FDE+ + D ++ TT++  Y    D   ARE
Sbjct: 187 VLNALISVYVKCVSSPFVSSRSSMGAARRVFDEMPERDELSWTTMMTGYVKNDDLDAARE 246

Query: 186 LFDATPLRVRDTVSYNAMITGYSHNEDGFNAVKLYREMKQERFRPDTFT 40
             D     V   V++NA+I+GY H E    A++++R+M   R + D FT
Sbjct: 247 FLDGMSENVG--VAWNALISGYVHRELYQEALEMFRKMLMLRIQLDEFT 293


>ref|XP_004301492.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like, partial [Fragaria vesca subsp. vesca]
          Length = 800

 Score =  150 bits (380), Expect = 1e-34
 Identities = 72/104 (69%), Positives = 84/104 (80%)
 Frame = -3

Query: 351 PRGHILNRLIDIYCKSRDITYARHLFDEILQPDIVARTTLIAAYSNAGDTKLARELFDAT 172
           PRGHILNRLID+YCKS ++ YA HLFDEI  PDIVARTTL++AYS  GD  LAR +F  T
Sbjct: 54  PRGHILNRLIDVYCKSNNLRYALHLFDEIPNPDIVARTTLVSAYSGVGDVTLARRVFRET 113

Query: 171 PLRVRDTVSYNAMITGYSHNEDGFNAVKLYREMKQERFRPDTFT 40
           P+ +RDTVSYNAMITGYS N DG  AV+L+REM++  FRPD FT
Sbjct: 114 PVSMRDTVSYNAMITGYSQNRDGNAAVELFREMRRGGFRPDHFT 157



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/94 (30%), Positives = 55/94 (58%)
 Frame = -3

Query: 333 NRLIDIYCKSRDITYARHLFDEILQPDIVARTTLIAAYSNAGDTKLARELFDATPLRVRD 154
           N L+ +Y +   I  ARH+F+ +   D+V+   +++ Y NAG  + A+  F+  P   R 
Sbjct: 335 NALVTLYFRCGKIDEARHIFNNMSVRDLVSWNAILSGYVNAGRIQEAKSFFEEMP--ERS 392

Query: 153 TVSYNAMITGYSHNEDGFNAVKLYREMKQERFRP 52
            +S+  +I+G + N  G +A+KL+ +M+ + F+P
Sbjct: 393 GLSWTVIISGLAQNGYGEDAMKLFNQMRLDGFKP 426



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
 Frame = -3

Query: 339 ILNRLIDIYCKSRD----ITYARHLFDEILQPDIVARTTLIAAYSNAGDTKLARELFDAT 172
           + N L+ +Y K       +  AR +FDE+ + D ++ TT+I  Y    D   AR+L D  
Sbjct: 193 VSNALVSVYVKCASSLVVVAAARKVFDEMDKRDELSWTTMITGYVRNEDLDGARQLLDGM 252

Query: 171 PLRVRDTVSYNAMITGYSHNEDGFNAVKLYREMKQERFRPDTFT 40
             ++   V++NAMI+GY H+     A++L+REM     R D +T
Sbjct: 253 DDKLE--VAWNAMISGYVHHGFCHEALQLFREMHLMGIRQDEYT 294


>ref|XP_006342194.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Solanum tuberosum]
          Length = 804

 Score =  149 bits (377), Expect = 3e-34
 Identities = 68/104 (65%), Positives = 85/104 (81%)
 Frame = -3

Query: 351 PRGHILNRLIDIYCKSRDITYARHLFDEILQPDIVARTTLIAAYSNAGDTKLARELFDAT 172
           PR HILN LI+IYCK+  + YA+HLFD I QPD+VARTT+IAAYS +G+ KLARE+FD T
Sbjct: 57  PRSHILNNLINIYCKNSGLVYAKHLFDRIPQPDVVARTTMIAAYSASGEPKLAREVFDKT 116

Query: 171 PLRVRDTVSYNAMITGYSHNEDGFNAVKLYREMKQERFRPDTFT 40
           PL +RDTV YNAMITGYSHN DG  A+KL+ +M+ + F+PD +T
Sbjct: 117 PLSIRDTVCYNAMITGYSHNNDGHAAIKLFLDMRWKNFQPDEYT 160


>ref|XP_006435103.1| hypothetical protein CICLE_v10000322mg [Citrus clementina]
           gi|557537225|gb|ESR48343.1| hypothetical protein
           CICLE_v10000322mg [Citrus clementina]
          Length = 799

 Score =  149 bits (375), Expect = 5e-34
 Identities = 70/104 (67%), Positives = 87/104 (83%)
 Frame = -3

Query: 351 PRGHILNRLIDIYCKSRDITYARHLFDEILQPDIVARTTLIAAYSNAGDTKLARELFDAT 172
           PRGHI+NRLIDIYCKS ++ YAR LFDEI QPDIVARTTLIAAYS + + KLARE+F+ T
Sbjct: 48  PRGHIINRLIDIYCKSLNLVYARKLFDEIPQPDIVARTTLIAAYSASDNVKLAREMFNKT 107

Query: 171 PLRVRDTVSYNAMITGYSHNEDGFNAVKLYREMKQERFRPDTFT 40
           PL+ RDTV YNAMIT YSHN +G  A++L+R+M+++  +PD FT
Sbjct: 108 PLKKRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFT 151



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 31/94 (32%), Positives = 58/94 (61%)
 Frame = -3

Query: 333 NRLIDIYCKSRDITYARHLFDEILQPDIVARTTLIAAYSNAGDTKLARELFDATPLRVRD 154
           N L+ +Y K   +  AR +F+++ + D+V+   +++AY +AG    A+ LF+A  +R R+
Sbjct: 334 NALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEA--MRERN 391

Query: 153 TVSYNAMITGYSHNEDGFNAVKLYREMKQERFRP 52
            +S+  MI+G + N  G   +KL+ +M+ E F+P
Sbjct: 392 LLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKP 425


>ref|XP_002302000.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550344162|gb|EEE81273.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 797

 Score =  148 bits (374), Expect = 7e-34
 Identities = 71/104 (68%), Positives = 86/104 (82%)
 Frame = -3

Query: 351 PRGHILNRLIDIYCKSRDITYARHLFDEILQPDIVARTTLIAAYSNAGDTKLARELFDAT 172
           PRGHILNRLIDIY KS  + YAR+LFDEI QPDIVARTTLIAAYS AGD KL+R++F  T
Sbjct: 46  PRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYSAAGDLKLSRKIFSDT 105

Query: 171 PLRVRDTVSYNAMITGYSHNEDGFNAVKLYREMKQERFRPDTFT 40
           PL +RD+V YNAMIT YSHN DG  A++L+ +M+++ FRPD +T
Sbjct: 106 PLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYT 149


>gb|EXB53614.1| hypothetical protein L484_005164 [Morus notabilis]
          Length = 800

 Score =  146 bits (368), Expect = 3e-33
 Identities = 68/104 (65%), Positives = 85/104 (81%)
 Frame = -3

Query: 351 PRGHILNRLIDIYCKSRDITYARHLFDEILQPDIVARTTLIAAYSNAGDTKLARELFDAT 172
           PRGHI+NRLID+YCK  +++YAR+LFDEI QPD+VARTTL+AAYS AG+ KLARE+F   
Sbjct: 47  PRGHIVNRLIDVYCKCSNLSYARNLFDEIPQPDVVARTTLVAAYSAAGNLKLAREIFCGI 106

Query: 171 PLRVRDTVSYNAMITGYSHNEDGFNAVKLYREMKQERFRPDTFT 40
           PL +RDT+ YNAMITGYS N DGF A +L+R+M+ +   PD FT
Sbjct: 107 PLDMRDTICYNAMITGYSRNNDGFAAFQLFRDMRWDGVTPDDFT 150



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 30/83 (36%), Positives = 51/83 (61%)
 Frame = -3

Query: 288 ARHLFDEILQPDIVARTTLIAAYSNAGDTKLARELFDATPLRVRDTVSYNAMITGYSHNE 109
           AR LFDE+++ D ++ TT+I  Y    D   AR+L +    ++   V++NAMI+GY H++
Sbjct: 213 ARKLFDEMVEKDELSWTTIITGYVRCNDLDAARKLLEGMNEKIG--VAWNAMISGYVHHD 270

Query: 108 DGFNAVKLYREMKQERFRPDTFT 40
               A+K++R+M+ +    D FT
Sbjct: 271 RFQEALKMFRKMQSQGILQDEFT 293


>ref|XP_007034693.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao] gi|508713722|gb|EOY05619.1| Pentatricopeptide
           repeat (PPR) superfamily protein [Theobroma cacao]
          Length = 788

 Score =  145 bits (367), Expect = 4e-33
 Identities = 67/104 (64%), Positives = 85/104 (81%)
 Frame = -3

Query: 351 PRGHILNRLIDIYCKSRDITYARHLFDEILQPDIVARTTLIAAYSNAGDTKLARELFDAT 172
           PRGHILNRLID+YCKS  I YAR+LFD+I  PDIV+RT+L+ AYS +G+ K ARE+F+ T
Sbjct: 46  PRGHILNRLIDVYCKSSRIDYARNLFDKIPAPDIVSRTSLVLAYSTSGNIKKAREMFEET 105

Query: 171 PLRVRDTVSYNAMITGYSHNEDGFNAVKLYREMKQERFRPDTFT 40
           PL +RD+V YNAMITG+S NEDG   +KL+R+M ++ FRPD FT
Sbjct: 106 PLSIRDSVFYNAMITGFSRNEDGHACIKLFRQMLRDEFRPDNFT 149



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 33/100 (33%), Positives = 55/100 (55%)
 Frame = -3

Query: 339 ILNRLIDIYCKSRDITYARHLFDEILQPDIVARTTLIAAYSNAGDTKLARELFDATPLRV 160
           +LN L+ +Y     +  AR LFDE+ + D ++ TT++  Y    +   AREL D   +  
Sbjct: 185 VLNALVSVYVNCTLMFEARKLFDEMSEKDELSWTTMVTGYVKNDELDAARELVDG--MNE 242

Query: 159 RDTVSYNAMITGYSHNEDGFNAVKLYREMKQERFRPDTFT 40
           +  V++NAMI+GY H+     A+ ++R+M     + D FT
Sbjct: 243 KLAVAWNAMISGYVHHGRYEEALDMFRKMYFMGIKMDEFT 282


>ref|XP_004238467.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Solanum lycopersicum]
          Length = 804

 Score =  145 bits (366), Expect = 6e-33
 Identities = 67/104 (64%), Positives = 83/104 (79%)
 Frame = -3

Query: 351 PRGHILNRLIDIYCKSRDITYARHLFDEILQPDIVARTTLIAAYSNAGDTKLARELFDAT 172
           PR HILN LI+IYCK+  + YA+HLFD I QPD+VARTT+IAAYS +G+ KLARE+FD T
Sbjct: 57  PRSHILNSLINIYCKNSGLVYAKHLFDRIPQPDVVARTTMIAAYSASGEPKLAREIFDKT 116

Query: 171 PLRVRDTVSYNAMITGYSHNEDGFNAVKLYREMKQERFRPDTFT 40
           PL  RDTV YNAMITGYSHN  G  A+KL+ +M+ + F+PD +T
Sbjct: 117 PLSFRDTVCYNAMITGYSHNNHGHAAIKLFLDMRWKNFQPDEYT 160


>ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
           gi|449504088|ref|XP_004162249.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  142 bits (359), Expect = 4e-32
 Identities = 68/103 (66%), Positives = 82/103 (79%)
 Frame = -3

Query: 348 RGHILNRLIDIYCKSRDITYARHLFDEILQPDIVARTTLIAAYSNAGDTKLARELFDATP 169
           RGHI+NRLIDIY KS D  YAR LFDEI QPD++ARTTLI AYS  G+ K+ARE+F+ TP
Sbjct: 47  RGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTLITAYSALGNLKMAREIFNETP 106

Query: 168 LRVRDTVSYNAMITGYSHNEDGFNAVKLYREMKQERFRPDTFT 40
           L +RDTV YNAMITGYSH  DG +A++L+R M+   F+PD FT
Sbjct: 107 LDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFT 149



 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 31/97 (31%), Positives = 54/97 (55%)
 Frame = -3

Query: 333 NRLIDIYCKSRDITYARHLFDEILQPDIVARTTLIAAYSNAGDTKLARELFDATPLRVRD 154
           N LI +Y K   +  AR +F E+   DI+   TL++ Y NAG  + A+  F   P   ++
Sbjct: 332 NTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMP--EKN 389

Query: 153 TVSYNAMITGYSHNEDGFNAVKLYREMKQERFRPDTF 43
            +++  MI+G + N  G  A+KL+ +MK + + P+ +
Sbjct: 390 LLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDY 426


>ref|XP_006415862.1| hypothetical protein EUTSA_v10006846mg [Eutrema salsugineum]
           gi|557093633|gb|ESQ34215.1| hypothetical protein
           EUTSA_v10006846mg [Eutrema salsugineum]
          Length = 787

 Score =  142 bits (357), Expect = 6e-32
 Identities = 62/104 (59%), Positives = 84/104 (80%)
 Frame = -3

Query: 351 PRGHILNRLIDIYCKSRDITYARHLFDEILQPDIVARTTLIAAYSNAGDTKLARELFDAT 172
           PR HILNRLID+YCKS ++ YAR LFDEI +PD +ARTT+++ Y  +GD  LAR +F+ T
Sbjct: 47  PRAHILNRLIDVYCKSSELHYARQLFDEISEPDKIARTTMVSGYCASGDVTLARCVFEET 106

Query: 171 PLRVRDTVSYNAMITGYSHNEDGFNAVKLYREMKQERFRPDTFT 40
           PL +RDTV YNAMITG++HN DG++A+ ++ EMK++ F+PD FT
Sbjct: 107 PLSMRDTVMYNAMITGFTHNHDGYSAINMFCEMKRQGFKPDNFT 150


>ref|XP_006306802.1| hypothetical protein CARUB_v10008344mg [Capsella rubella]
           gi|482575513|gb|EOA39700.1| hypothetical protein
           CARUB_v10008344mg [Capsella rubella]
          Length = 790

 Score =  141 bits (355), Expect = 1e-31
 Identities = 63/104 (60%), Positives = 83/104 (79%)
 Frame = -3

Query: 351 PRGHILNRLIDIYCKSRDITYARHLFDEILQPDIVARTTLIAAYSNAGDTKLARELFDAT 172
           PR HILNRLID+YCKS ++ YAR LFDEI +PD +ARTT+++ Y  +GD  LAR +F+ T
Sbjct: 47  PRAHILNRLIDVYCKSSELRYARELFDEISEPDKIARTTMVSGYCASGDITLARGVFEET 106

Query: 171 PLRVRDTVSYNAMITGYSHNEDGFNAVKLYREMKQERFRPDTFT 40
            + +RDTV YNAMITG+SHN DG++A+KL+ +MK E F+PD FT
Sbjct: 107 SVSMRDTVMYNAMITGFSHNNDGYSAIKLFCKMKHEGFQPDNFT 150


>ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297339271|gb|EFH69688.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 790

 Score =  141 bits (355), Expect = 1e-31
 Identities = 62/104 (59%), Positives = 82/104 (78%)
 Frame = -3

Query: 351 PRGHILNRLIDIYCKSRDITYARHLFDEILQPDIVARTTLIAAYSNAGDTKLARELFDAT 172
           P  HILNRLID+YCKS ++ YAR LFDEI +PD +ARTT+++ Y  +GD  LAR +F+ T
Sbjct: 47  PHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTTMVSGYCASGDIALARSVFEET 106

Query: 171 PLRVRDTVSYNAMITGYSHNEDGFNAVKLYREMKQERFRPDTFT 40
           P+ +RDTV YNAMITG+SHN DG++A+ L+ +MK E F+PD FT
Sbjct: 107 PVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFT 150


>gb|EPS72239.1| hypothetical protein M569_02517, partial [Genlisea aurea]
          Length = 786

 Score =  140 bits (353), Expect = 2e-31
 Identities = 67/104 (64%), Positives = 83/104 (79%)
 Frame = -3

Query: 351 PRGHILNRLIDIYCKSRDITYARHLFDEILQPDIVARTTLIAAYSNAGDTKLARELFDAT 172
           PR HILNRLID+YCKS    YAR +FDEI QPD+V RTTLIAAYS+ G+ K+AR LFDAT
Sbjct: 41  PRRHILNRLIDMYCKSSCFDYARKMFDEIPQPDVVTRTTLIAAYSSYGNPKMARVLFDAT 100

Query: 171 PLRVRDTVSYNAMITGYSHNEDGFNAVKLYREMKQERFRPDTFT 40
           P+ +RD + YNAMIT YSHN+DG  A+KL+ +MK++ F PD F+
Sbjct: 101 PVGIRDNICYNAMITCYSHNDDGCAALKLFVDMKRDGFTPDFFS 144



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 35/100 (35%), Positives = 51/100 (51%)
 Frame = -3

Query: 339 ILNRLIDIYCKSRDITYARHLFDEILQPDIVARTTLIAAYSNAGDTKLARELFDATPLRV 160
           +LN L+ +Y K   +  AR LFDE++  D ++ TT+IA Y    D   ARE+FD     +
Sbjct: 181 VLNALVSVYVKCESMASARLLFDEMVHKDELSWTTIIAGYVKNDDLAAAREVFDGMDEEL 240

Query: 159 RDTVSYNAMITGYSHNEDGFNAVKLYREMKQERFRPDTFT 40
              V++NAM++GY           + REM       D FT
Sbjct: 241 --VVAWNAMMSGYVQKGMVSEVFGMLREMYSRGINFDDFT 278


>ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g25360 gi|11067273|gb|AAG28801.1|AC079374_4
           hypothetical protein [Arabidopsis thaliana]
           gi|332192491|gb|AEE30612.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 790

 Score =  140 bits (353), Expect = 2e-31
 Identities = 62/104 (59%), Positives = 82/104 (78%)
 Frame = -3

Query: 351 PRGHILNRLIDIYCKSRDITYARHLFDEILQPDIVARTTLIAAYSNAGDTKLARELFDAT 172
           PR HILNRLID+YCKS ++ YAR LFDEI +PD +ARTT+++ Y  +GD  LAR +F+  
Sbjct: 47  PRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKA 106

Query: 171 PLRVRDTVSYNAMITGYSHNEDGFNAVKLYREMKQERFRPDTFT 40
           P+ +RDTV YNAMITG+SHN DG++A+ L+ +MK E F+PD FT
Sbjct: 107 PVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFT 150


>ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355479792|gb|AES60995.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  140 bits (352), Expect = 2e-31
 Identities = 68/104 (65%), Positives = 85/104 (81%)
 Frame = -3

Query: 351 PRGHILNRLIDIYCKSRDITYARHLFDEILQPDIVARTTLIAAYSNAGDTKLARELFDAT 172
           P   ILNRLI+IYCKS +ITYAR LFD+I +PDIVARTTL++AYS++G+ KLA++LF+AT
Sbjct: 38  PNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSSSGNVKLAQQLFNAT 97

Query: 171 PLRVRDTVSYNAMITGYSHNEDGFNAVKLYREMKQERFRPDTFT 40
           PL +RDTVSYNAMIT YSH  DG  A+ L+ +MK+  F PD FT
Sbjct: 98  PLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFT 141


>ref|XP_002521664.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539055|gb|EEF40651.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 574

 Score =  139 bits (349), Expect = 5e-31
 Identities = 69/104 (66%), Positives = 79/104 (75%)
 Frame = -3

Query: 351 PRGHILNRLIDIYCKSRDITYARHLFDEILQPDIVARTTLIAAYSNAGDTKLARELFDAT 172
           P GH LNRLI IYCKS  ++YAR LFDEI QPDIVARTTLI AYS  G  KLA+E+F  T
Sbjct: 50  PHGHTLNRLIYIYCKSSKLSYARSLFDEIPQPDIVARTTLINAYSATGHLKLAKEMFYET 109

Query: 171 PLRVRDTVSYNAMITGYSHNEDGFNAVKLYREMKQERFRPDTFT 40
           PL +RD V YNAMIT YSHN DG  A++L+ +MK+  FRPD FT
Sbjct: 110 PLIMRDAVIYNAMITAYSHNNDGHAAIELFCDMKRNDFRPDNFT 153



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
 Frame = -3

Query: 339 ILNRLIDIYCK---------SRDITYARHLFDEILQPDIVARTTLIAAYSNAGDTKLARE 187
           +LN LI +Y K         S  +  AR LFDE+   D ++ TT+I  Y    D   ARE
Sbjct: 189 VLNALISVYVKCASSPSVISSSLMGAARRLFDEMPVRDELSWTTIITGYVKNDDLDAARE 248

Query: 186 LFDATPLRVRDTVSYNAMITGYSHNEDGFNAVKLYREMKQERFRPDTFT 40
           +FD   +R +  V +NAMI+GY H      A++++R+M     + D FT
Sbjct: 249 VFDG--MREKLVVVWNAMISGYMHRGLYQEALEMFRKMYLAGLKLDEFT 295


>ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  138 bits (348), Expect = 7e-31
 Identities = 62/104 (59%), Positives = 83/104 (79%)
 Frame = -3

Query: 351 PRGHILNRLIDIYCKSRDITYARHLFDEILQPDIVARTTLIAAYSNAGDTKLARELFDAT 172
           PRGH LNRL+++YCKS ++ YAR LF+EI  PD +ARTTLI AY   G+ +L RE+F+ T
Sbjct: 46  PRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGT 105

Query: 171 PLRVRDTVSYNAMITGYSHNEDGFNAVKLYREMKQERFRPDTFT 40
           PL +RD+V YNAMITGY+HN DG +A++L+R M+++ FRPD FT
Sbjct: 106 PLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFT 149



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 29/99 (29%), Positives = 55/99 (55%)
 Frame = -3

Query: 339 ILNRLIDIYCKSRDITYARHLFDEILQPDIVARTTLIAAYSNAGDTKLARELFDATPLRV 160
           + N LI +YCK+  +  AR +F  +   +I+    +++ Y NAG  + A+  F+  P  V
Sbjct: 330 VSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMP--V 387

Query: 159 RDTVSYNAMITGYSHNEDGFNAVKLYREMKQERFRPDTF 43
           ++ ++   MI+G + N  G   +KL+++M+ + F P  F
Sbjct: 388 KNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDF 426


>ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  138 bits (347), Expect = 9e-31
 Identities = 62/104 (59%), Positives = 83/104 (79%)
 Frame = -3

Query: 351 PRGHILNRLIDIYCKSRDITYARHLFDEILQPDIVARTTLIAAYSNAGDTKLARELFDAT 172
           PRGH LNRL+++YCKS ++ YAR LF+EI  PD +ARTTLI AY   G+ +L RE+F+ T
Sbjct: 46  PRGHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGT 105

Query: 171 PLRVRDTVSYNAMITGYSHNEDGFNAVKLYREMKQERFRPDTFT 40
           PL +RD+V YNAMITGY+HN DG +A++L+R M+++ FRPD FT
Sbjct: 106 PLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFT 149



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 29/99 (29%), Positives = 55/99 (55%)
 Frame = -3

Query: 339 ILNRLIDIYCKSRDITYARHLFDEILQPDIVARTTLIAAYSNAGDTKLARELFDATPLRV 160
           + N LI +YCK+  +  AR +F  +   +I+    +++ Y NAG  + A+  F+  P  V
Sbjct: 330 VSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMP--V 387

Query: 159 RDTVSYNAMITGYSHNEDGFNAVKLYREMKQERFRPDTF 43
           ++ ++   MI+G + N  G   +KL+++M+ + F P  F
Sbjct: 388 KNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDF 426