BLASTX nr result
ID: Cocculus23_contig00033245
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00033245
(892 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006378933.1| hypothetical protein POPTR_0009s00900g [Popu... 82 4e-13
ref|XP_002317407.1| hypothetical protein POPTR_0011s07150g [Popu... 78 4e-12
ref|XP_002307276.1| hypothetical protein POPTR_0005s18370g [Popu... 77 1e-11
gb|AHN13809.1| movement protein [Aristotelia chilensis vein clea... 73 1e-10
ref|XP_006398074.1| hypothetical protein EUTSA_v10001103mg [Eutr... 72 4e-10
ref|XP_006408860.1| hypothetical protein EUTSA_v10002189mg, part... 68 4e-09
ref|XP_007036219.1| Uncharacterized protein TCM_012065 [Theobrom... 68 4e-09
ref|XP_006398032.1| hypothetical protein EUTSA_v10001266mg [Eutr... 67 1e-08
gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus] 66 2e-08
sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contain... 66 2e-08
ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]... 66 2e-08
ref|XP_006478654.1| PREDICTED: uncharacterized protein LOC102625... 65 5e-08
ref|XP_006409623.1| hypothetical protein EUTSA_v10022984mg, part... 63 1e-07
gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus] 62 3e-07
ref|YP_008992013.1| polyprotein [Citrus endogenous pararetroviru... 62 3e-07
ref|XP_006494615.1| PREDICTED: uncharacterized protein LOC102626... 61 5e-07
gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus] 61 7e-07
ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, part... 60 9e-07
ref|XP_006408742.1| hypothetical protein EUTSA_v10002187mg, part... 59 2e-06
ref|XP_006405193.1| hypothetical protein EUTSA_v10000496mg [Eutr... 59 3e-06
>ref|XP_006378933.1| hypothetical protein POPTR_0009s00900g [Populus trichocarpa]
gi|550330770|gb|ERP56730.1| hypothetical protein
POPTR_0009s00900g [Populus trichocarpa]
Length = 335
Score = 81.6 bits (200), Expect = 4e-13
Identities = 39/96 (40%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
Frame = -3
Query: 704 FSSQSLAFSKKVKKIVSKTPFPSIPVKEYVQVSDFAEHQVPADESEHF--LSNPPRSPPQ 531
F+ +S + + +K ++ + PS KEYVQ S F +H++PA EHF L P P Q
Sbjct: 66 FTKKSPSVIRSIKTLIKQ---PSRVAKEYVQASSFDQHKIPATSREHFVTLEIPTEFPGQ 122
Query: 530 WKQAGYTHLNYGAVKLSLTFHGRRTCPTVSRLALVD 423
W GYTH+++ A++L+L++HGR+ P +RLAL+D
Sbjct: 123 WISQGYTHIHFCAIRLALSYHGRKGLPVAARLALLD 158
>ref|XP_002317407.1| hypothetical protein POPTR_0011s07150g [Populus trichocarpa]
gi|222860472|gb|EEE98019.1| hypothetical protein
POPTR_0011s07150g [Populus trichocarpa]
Length = 950
Score = 78.2 bits (191), Expect = 4e-12
Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 6/94 (6%)
Frame = -3
Query: 686 AFSKKVKKIVSKTPF----PSIPVKEYVQVSDFAEHQVPADESEHF--LSNPPRSPPQWK 525
AF+KK ++ PS KEYVQ S F +H++PA E F L P P QW
Sbjct: 16 AFTKKSPSVICSIKTLIKQPSRVAKEYVQASSFDQHKIPATSKEQFVTLEIPTEFPGQWI 75
Query: 524 QAGYTHLNYGAVKLSLTFHGRRTCPTVSRLALVD 423
GYTH+ +GA++L+L++HGR+ P ++LAL+D
Sbjct: 76 SQGYTHIYFGAIRLALSYHGRKGLPVAAQLALLD 109
>ref|XP_002307276.1| hypothetical protein POPTR_0005s18370g [Populus trichocarpa]
gi|222856725|gb|EEE94272.1| hypothetical protein
POPTR_0005s18370g [Populus trichocarpa]
Length = 667
Score = 76.6 bits (187), Expect = 1e-11
Identities = 37/96 (38%), Positives = 60/96 (62%), Gaps = 2/96 (2%)
Frame = -3
Query: 704 FSSQSLAFSKKVKKIVSKTPFPSIPVKEYVQVSDFAEHQVPADESEHF--LSNPPRSPPQ 531
F+ +S + + +K ++ + PS KEYVQ S F +H++PA E F L P Q
Sbjct: 66 FAKRSPSVIRSIKTLIKQ---PSRVAKEYVQASSFDQHKIPATSREQFVTLEIPSEFLGQ 122
Query: 530 WKQAGYTHLNYGAVKLSLTFHGRRTCPTVSRLALVD 423
W GYTH+++GA++L+L++HG++ P +RLAL+D
Sbjct: 123 WISQGYTHIHFGAIRLALSYHGQKGLPVAARLALLD 158
>gb|AHN13809.1| movement protein [Aristotelia chilensis vein clearing virus]
Length = 820
Score = 73.2 bits (178), Expect = 1e-10
Identities = 56/172 (32%), Positives = 87/172 (50%), Gaps = 15/172 (8%)
Frame = -3
Query: 704 FSSQSLAFSKKVKKIVSKTPFPSIPVKEYVQVSDFAEHQVPADESEHF--LSNPPRSPPQ 531
F + +K + I+S + VKEYVQ + F + +PA + E F L P P Q
Sbjct: 75 FIKPQTSLTKSICSIISPS---KSHVKEYVQSTRFDQCFLPASQKEQFVTLEIPSVYPSQ 131
Query: 530 WKQAGYTHLNYGAVKLSLTFHGRRTCPTVSRLALVDYGLIK*L*RCLNNTNQKKKSDGT- 354
W G+THL++GAV+L+LTFHGR+ P SR+AL+D ++ C+ T + + GT
Sbjct: 132 WIAEGFTHLHFGAVRLALTFHGRKGLPISSRIALLDSRFLEYQHACI-GTIETTLNAGTV 190
Query: 353 --------DDKLKCLHTLTETNMKID----TMIQHT*A*THLHFPIHWNYQH 234
+ LK H LT +++ T +Q T T LH+ + + Q+
Sbjct: 191 FVTLFPNFNMPLKDPHLLTALKVQVQIVGATQVQETFGAT-LHYQLVYRVQN 241
>ref|XP_006398074.1| hypothetical protein EUTSA_v10001103mg [Eutrema salsugineum]
gi|557099163|gb|ESQ39527.1| hypothetical protein
EUTSA_v10001103mg [Eutrema salsugineum]
Length = 1135
Score = 71.6 bits (174), Expect = 4e-10
Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 3/97 (3%)
Frame = -3
Query: 704 FSSQSLAFSKK-VKKIVSKTPFPSIPVKEYVQVSDFAEHQVPADESEHFLS-NPPRSPPQ 531
F+ + AFS K V++++ P + V EYVQ S F+ QVPA E E F+S N P + +
Sbjct: 60 FAKKPSAFSVKGVRELIK--PSSNRKVMEYVQSSKFSSCQVPATEEEQFISLNIPENLRR 117
Query: 530 -WKQAGYTHLNYGAVKLSLTFHGRRTCPTVSRLALVD 423
W+Q GYTHL++G V++ LT H R+ ++R+ALVD
Sbjct: 118 LWQQQGYTHLHFGVVRIGLTLHARKGLLVIARIALVD 154
>ref|XP_006408860.1| hypothetical protein EUTSA_v10002189mg, partial [Eutrema
salsugineum] gi|557110016|gb|ESQ50313.1| hypothetical
protein EUTSA_v10002189mg, partial [Eutrema salsugineum]
Length = 261
Score = 68.2 bits (165), Expect = 4e-09
Identities = 43/104 (41%), Positives = 62/104 (59%), Gaps = 5/104 (4%)
Frame = -3
Query: 704 FSSQSLAFSKKVKKIVSKTPFPSIPVKEYVQVSDFAEHQVPADESEHFLS-NPPRSPPQ- 531
F+ + AFS K + + K P + V EYVQ S F+ QVPA E E F+S N P + P+
Sbjct: 35 FAKKPSAFSVKCVRELIK-PSSNRKVMEYVQSSKFSSCQVPATEEEQFISLNIPENLPRL 93
Query: 530 WKQAGYTHLNYGAVKLSLTFHGRRTCPTV---SRLALVDYGLIK 408
W+Q GYTHL++G V++ LT H R+ T+ ++L D L+K
Sbjct: 94 WQQQGYTHLHFGVVRIGLTLHARKVFVTLFPNFNVSLQDPNLLK 137
>ref|XP_007036219.1| Uncharacterized protein TCM_012065 [Theobroma cacao]
gi|508773464|gb|EOY20720.1| Uncharacterized protein
TCM_012065 [Theobroma cacao]
Length = 280
Score = 68.2 bits (165), Expect = 4e-09
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Frame = -3
Query: 677 KKVKKIVSKTPFPSIPVKEYVQVSDFAEHQVPADESEHF--LSNPPRSPPQWKQAGYTHL 504
K +K ++ +P KEY+Q + F EH + D++E F L P P QW GY+H+
Sbjct: 67 KSIKTLIKHSPKAP---KEYIQSTRFDEHFIQGDQAEQFVTLQIPLEFPQQWIHHGYSHI 123
Query: 503 NYGAVKLSLTFHGRRTCPTVSRLALVDYGLIK 408
++GAV+L+L +HGR V+ +AL+D IK
Sbjct: 124 HFGAVRLALNYHGREGQSVVAHMALLDSRYIK 155
>ref|XP_006398032.1| hypothetical protein EUTSA_v10001266mg [Eutrema salsugineum]
gi|557099114|gb|ESQ39485.1| hypothetical protein
EUTSA_v10001266mg [Eutrema salsugineum]
Length = 492
Score = 66.6 bits (161), Expect = 1e-08
Identities = 36/98 (36%), Positives = 56/98 (57%), Gaps = 4/98 (4%)
Frame = -3
Query: 704 FSSQSLAFSKKVKKIVSKTPFPSIPVKEYVQVSDFAEHQVPADESEHFLSNPPRSPP--- 534
F+ F K +K++ + + +E + S +H VPA E++ + P R
Sbjct: 47 FTKPKSTFPKVIKQVFGPSKHAA---RELILASQMEQHLVPATETKQMI--PLRFNEGMV 101
Query: 533 -QWKQAGYTHLNYGAVKLSLTFHGRRTCPTVSRLALVD 423
QWK GYTHL+YGA++L+LT HGR+ P V+R+AL+D
Sbjct: 102 HQWKTHGYTHLHYGAIRLALTLHGRKDLPVVARVALLD 139
>gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]
Length = 1886
Score = 66.2 bits (160), Expect = 2e-08
Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Frame = -3
Query: 704 FSSQSLAFSKKVKKIVSKTPFPSIPVKEYVQVSDFAEHQVPADESEHF--LSNPPRSPPQ 531
F+ +S+ +++ +V P VKEYV S +H V A E F L P
Sbjct: 61 FAKRSVTPWSQIRSLVQSKPRH---VKEYVAASKLDQHPVFATGEEQFVTLHIPEEFASH 117
Query: 530 WKQAGYTHLNYGAVKLSLTFHGRRTCPTVSRLALVD 423
WK +TH+++GAVK++LT+HGR+ P V+RLAL+D
Sbjct: 118 WKSHQFTHIHFGAVKIALTYHGRKGQPVVARLALLD 153
>sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Movement
protein; Short=MP; Contains: RecName: Full=Capsid
protein; Short=CP; Contains: RecName: Full=Aspartic
protease; Short=PR; Contains: RecName: Full=Reverse
transcriptase; Short=RT gi|34328896|gb|AAO67368.1|
polyprotein 1 [Petunia vein clearing virus]
Length = 2180
Score = 66.2 bits (160), Expect = 2e-08
Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Frame = -3
Query: 704 FSSQSLAFSKKVKKIVSKTPFPSIPVKEYVQVSDFAEHQVPADESEHF--LSNPPRSPPQ 531
F+ +S+ +++ +V P VKEYV S +H V A E F L P
Sbjct: 61 FAKRSVTPWSQIRSLVQSKPRH---VKEYVAASKLDQHPVFATGEEQFVTLHIPEEFASH 117
Query: 530 WKQAGYTHLNYGAVKLSLTFHGRRTCPTVSRLALVD 423
WK +TH+++GAVK++LT+HGR+ P V+RLAL+D
Sbjct: 118 WKSHQFTHIHFGAVKIALTYHGRKGQPVVARLALLD 153
>ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]
gi|82061579|sp|Q91DM0.1|POLG_PVCV1 RecName: Full=Genome
polyprotein; Contains: RecName: Full=Movement protein;
Short=MP; Contains: RecName: Full=Capsid protein;
Short=CP; Contains: RecName: Full=Aspartic protease;
Short=PR; Contains: RecName: Full=Reverse transcriptase;
Short=RT gi|14574598|gb|AAK68664.1| ORF I polyprotein
[petunia vein clearing virus]
Length = 2179
Score = 66.2 bits (160), Expect = 2e-08
Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Frame = -3
Query: 704 FSSQSLAFSKKVKKIVSKTPFPSIPVKEYVQVSDFAEHQVPADESEHF--LSNPPRSPPQ 531
F+ +S+ +++ +V P VKEYV S +H V A E F L P
Sbjct: 60 FAKRSVTPWSQIRSLVQSKPRH---VKEYVAASKLDQHPVFATGEEQFVTLHIPEEFASH 116
Query: 530 WKQAGYTHLNYGAVKLSLTFHGRRTCPTVSRLALVD 423
WK +TH+++GAVK++LT+HGR+ P V+RLAL+D
Sbjct: 117 WKSHQFTHIHFGAVKIALTYHGRKGQPVVARLALLD 152
>ref|XP_006478654.1| PREDICTED: uncharacterized protein LOC102625625 [Citrus sinensis]
Length = 287
Score = 64.7 bits (156), Expect = 5e-08
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Frame = -3
Query: 695 QSLAFSKKVKKIVS-KTPFPSIPVKEYVQVSDFAEHQVPADESEHF--LSNPPRSPPQWK 525
Q +F++ ++ ++S K P P KEY+Q S + + A +SE + L P WK
Sbjct: 67 QKTSFTRSIRTLISTKRPLP----KEYIQSSRLDQCDLQASQSEQYVTLEIPTDLVTNWK 122
Query: 524 QAGYTHLNYGAVKLSLTFHGRRTCPTVSRLALVD 423
+ GYT+L+ G V+L LT HGR+ P +R+AL+D
Sbjct: 123 REGYTYLHLGGVRLILTLHGRKGLPVTARIALLD 156
>ref|XP_006409623.1| hypothetical protein EUTSA_v10022984mg, partial [Eutrema
salsugineum] gi|557110785|gb|ESQ51076.1| hypothetical
protein EUTSA_v10022984mg, partial [Eutrema salsugineum]
Length = 397
Score = 63.2 bits (152), Expect = 1e-07
Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Frame = -3
Query: 704 FSSQSLAFSKKVKKIVSKTPFPSIPVKEYVQVSDFAEHQVPADESEHFLSNPPRSPP--- 534
F+ + +F K +K++ + + +E + S +H VPA E+E + P R
Sbjct: 47 FTKPNSSFPKVIKQVFGPSKHAA---RELILASQMEQHLVPATETEKMI--PLRFNEGMV 101
Query: 533 -QWKQAGYTHLNYGAVKLSLTFHGRRTCPTVSRLALV 426
QWK GYTHL+YGA++L+LT HGR+ P V+R A +
Sbjct: 102 HQWKTHGYTHLHYGAIRLALTLHGRKGLPVVARHACI 138
>gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]
Length = 1799
Score = 62.0 bits (149), Expect = 3e-07
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Frame = -3
Query: 686 AFSKKVKKIVS-KTPFPSIPVKEYVQVSDFAEHQVPADESEHF--LSNPPRSPPQWKQAG 516
+F++ ++ ++S K P P KEY+Q S + + A +E + L P WK+ G
Sbjct: 67 SFTRSIRTLISTKRPHP----KEYIQSSRLDQCALKATSAEQYVTLEIPSELISNWKREG 122
Query: 515 YTHLNYGAVKLSLTFHGRRTCPTVSRLALVD 423
YTHL+ G ++L LT HGR+ P +R+AL+D
Sbjct: 123 YTHLHLGGIRLILTLHGRKGLPVTARVALLD 153
>ref|YP_008992013.1| polyprotein [Citrus endogenous pararetrovirus]
gi|565672276|gb|AHC13194.1| polyprotein [Citrus
endogenous pararetrovirus]
Length = 1812
Score = 62.0 bits (149), Expect = 3e-07
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Frame = -3
Query: 686 AFSKKVKKIVS-KTPFPSIPVKEYVQVSDFAEHQVPADESEHF--LSNPPRSPPQWKQAG 516
+F++ ++ ++S K P P KEY+Q S + + A +E + L P WK+ G
Sbjct: 67 SFTRSIRTLISTKRPHP----KEYIQSSRLDQCALKATSAEQYVTLEIPSELISNWKREG 122
Query: 515 YTHLNYGAVKLSLTFHGRRTCPTVSRLALVD 423
YTHL+ G ++L LT HGR+ P +R+AL+D
Sbjct: 123 YTHLHLGGIRLILTLHGRKGLPVTARVALLD 153
>ref|XP_006494615.1| PREDICTED: uncharacterized protein LOC102626000 [Citrus sinensis]
Length = 449
Score = 61.2 bits (147), Expect = 5e-07
Identities = 35/90 (38%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Frame = -3
Query: 683 FSKKVKKIVS-KTPFPSIPVKEYVQVSDFAEHQVPADESEHF--LSNPPRSPPQWKQAGY 513
F++ ++ ++S K P P KEYVQ S + + A ++E + L P QW++ GY
Sbjct: 322 FTRSIRTLISMKRPTP----KEYVQSSRLHQCALQATQAEQYVTLEIPTDLIAQWQREGY 377
Query: 512 THLNYGAVKLSLTFHGRRTCPTVSRLALVD 423
THL+ G V+L LT HGR+ P + LAL+D
Sbjct: 378 THLHLGGVRLILTLHGRKGLPVTASLALLD 407
>gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]
Length = 1701
Score = 60.8 bits (146), Expect = 7e-07
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Frame = -3
Query: 686 AFSKKVKKIVS-KTPFPSIPVKEYVQVSDFAEHQVPADESEHF--LSNPPRSPPQWKQAG 516
+F++ ++ ++S + P P KEY+Q S + + A +E + L P WK+ G
Sbjct: 67 SFTRSIRTLISTRRPHP----KEYIQSSCLDQCSLQATPAEQYVTLEIPSELISNWKREG 122
Query: 515 YTHLNYGAVKLSLTFHGRRTCPTVSRLALVD 423
YTHL+ G ++L LT HGR+ P +RLA++D
Sbjct: 123 YTHLHLGGIRLILTLHGRKGLPVTARLAMLD 153
>ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, partial [Eutrema
salsugineum] gi|557090298|gb|ESQ31006.1| hypothetical
protein EUTSA_v10012231mg, partial [Eutrema salsugineum]
Length = 1904
Score = 60.5 bits (145), Expect = 9e-07
Identities = 32/94 (34%), Positives = 53/94 (56%)
Frame = -3
Query: 704 FSSQSLAFSKKVKKIVSKTPFPSIPVKEYVQVSDFAEHQVPADESEHFLSNPPRSPPQWK 525
F+ + F K +K++ + + +E + S +H VPA E+E + P +
Sbjct: 22 FTKPNSTFPKVIKQVFGPSKHAA---RELILASQMEQHLVPATETEQMI---PLCFNEGM 75
Query: 524 QAGYTHLNYGAVKLSLTFHGRRTCPTVSRLALVD 423
GYTHL+YGA++L+LT H R+ P V+R+AL+D
Sbjct: 76 THGYTHLHYGAIRLALTLHARKGLPVVARVALLD 109
>ref|XP_006408742.1| hypothetical protein EUTSA_v10002187mg, partial [Eutrema
salsugineum] gi|557109898|gb|ESQ50195.1| hypothetical
protein EUTSA_v10002187mg, partial [Eutrema salsugineum]
Length = 341
Score = 59.3 bits (142), Expect = 2e-06
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Frame = -3
Query: 626 KEYVQVSDFAEHQVPADESEHFLSNPPRSPP----QWKQAGYTHLNYGAVKLSLTFHGRR 459
+E + S +H VPA +E + P R QWK GYTHL+Y A++L+LT HGR+
Sbjct: 67 RELIPASQMEQHLVPATGTEQMI--PLRFNEGMVHQWKNHGYTHLHYRAIRLALTLHGRK 124
Query: 458 TCPTVSRLALVD 423
P V+R+A++D
Sbjct: 125 GLPVVARVAILD 136
>ref|XP_006405193.1| hypothetical protein EUTSA_v10000496mg [Eutrema salsugineum]
gi|557106321|gb|ESQ46646.1| hypothetical protein
EUTSA_v10000496mg [Eutrema salsugineum]
Length = 957
Score = 58.9 bits (141), Expect = 3e-06
Identities = 40/97 (41%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Frame = -3
Query: 704 FSSQSLAFSKK-VKKIVSKTPFPSIPVKEYVQVSDFAEHQVPADESEHFLS-NPPRSPPQ 531
F+ + AFS K V++++ P + V EYVQ S F+ QVPA E E F+S N P + P+
Sbjct: 73 FAKKPSAFSVKGVRELIK--PSSNRKVMEYVQSSKFSSCQVPATEEEQFISLNIPENLPR 130
Query: 530 -WKQAGYTHLNYGAVKLSLTFHGRRTCPTVSRLALVD 423
W+Q GYTHL++G V+ ++RLALVD
Sbjct: 131 LWQQQGYTHLHFGVVR-------------IARLALVD 154