BLASTX nr result
ID: Cocculus23_contig00033100
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00033100
(813 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002535305.1| conserved hypothetical protein [Ricinus comm... 151 2e-64
ref|YP_002608359.1| orf104 [Vitis vinifera] gi|209954156|emb|CAQ... 197 4e-48
ref|YP_173422.1| hypothetical protein NitaMp080 [Nicotiana tabac... 195 1e-47
ref|YP_005090415.1| orf3 gene product (mitochondrion) [Boea hygr... 183 7e-44
gb|AGC78860.1| hypothetical protein (mitochondrion) [Vicia faba] 142 2e-31
ref|YP_588335.1| hypothetical protein ZeamMp073 [Zea mays subsp.... 129 1e-27
gb|EXC34909.1| hypothetical protein L484_020025 [Morus notabilis] 128 3e-27
ref|XP_003588296.1| hypothetical protein MTR_1g005540 [Medicago ... 111 4e-22
ref|XP_007149660.1| hypothetical protein PHAVU_005G088500g, part... 100 6e-19
gb|EXC21503.1| hypothetical protein L484_014858 [Morus notabilis] 93 1e-16
ref|XP_006369813.1| hypothetical protein POPTR_0001s32560g [Popu... 81 4e-13
gb|EEC75928.1| hypothetical protein OsI_13019 [Oryza sativa Indi... 78 3e-12
gb|EXC08244.1| hypothetical protein L484_012700 [Morus notabilis] 70 1e-09
gb|EHK62710.1| hypothetical protein M3S_K09, partial (mitochondr... 69 3e-09
gb|EXB24696.1| hypothetical protein L484_005490 [Morus notabilis] 59 2e-06
>ref|XP_002535305.1| conserved hypothetical protein [Ricinus communis]
gi|223523491|gb|EEF27078.1| conserved hypothetical
protein [Ricinus communis]
Length = 183
Score = 151 bits (382), Expect(2) = 2e-64
Identities = 72/85 (84%), Positives = 74/85 (87%)
Frame = +3
Query: 183 PAFRSIHS*GGRSRTLQVWERSWSGKAKTAPRIWVARGRLCPDGGALWGRAQPNRDSTPP 362
P + S+ G R L VWERSWSGKAKTAPRIWVARGRLCPDGGALWGRAQPNRDSTPP
Sbjct: 28 PGYHSMS--GIRGDILDVWERSWSGKAKTAPRIWVARGRLCPDGGALWGRAQPNRDSTPP 85
Query: 363 TSSAPLYRLNHSKGLVGGTGEPREL 437
TSSAPLYRLNHS GLVGGTGEPREL
Sbjct: 86 TSSAPLYRLNHSNGLVGGTGEPREL 110
Score = 122 bits (305), Expect(2) = 2e-64
Identities = 62/72 (86%), Positives = 62/72 (86%), Gaps = 3/72 (4%)
Frame = +1
Query: 532 QACTHC---QAVDSFIREGKKGPKHGGCRTLEWQRKARPYPFFQACSDIRFPRKIKLVSR 702
QACT QAVDSFIREGKKGPKH CRTLEWQRKA Y FFQACSDIRFPRKIKLVSR
Sbjct: 112 QACTLRLLRQAVDSFIREGKKGPKHLRCRTLEWQRKAGSYLFFQACSDIRFPRKIKLVSR 171
Query: 703 VMGNLPARFGEH 738
VMGNLPARFGEH
Sbjct: 172 VMGNLPARFGEH 183
Score = 89.7 bits (221), Expect = 1e-15
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 25 MNCRVDRSDPDAAVAPRRYGLDPLLPTPGHHSMSGIRGDILDV 153
MNCRVDRSDPDAAVAPRRYGLDPLLP PG+HSMSGIRGDILDV
Sbjct: 1 MNCRVDRSDPDAAVAPRRYGLDPLLPIPGYHSMSGIRGDILDV 43
>ref|YP_002608359.1| orf104 [Vitis vinifera] gi|209954156|emb|CAQ77593.1| orf104 [Vitis
vinifera] gi|239764779|gb|ACS15247.1| ORF104 [Vitis
vinifera]
Length = 103
Score = 197 bits (501), Expect = 4e-48
Identities = 90/93 (96%), Positives = 91/93 (97%)
Frame = -3
Query: 280 MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQPREWLRPVCPPLFPTCYGAPGW 101
MRGAVLA PDQDRSHTCSVRDRPPQLCIDRKAGRHSPQPREWLRPVCPPLFPTCYGAPGW
Sbjct: 1 MRGAVLALPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQPREWLRPVCPPLFPTCYGAPGW 60
Query: 100 VGAGRVRIAAEQQQRPDLIYLLGNSSGDFTVAK 2
+GAGRVRIAAEQQ RPDLIYLLGNSSGDFTVAK
Sbjct: 61 IGAGRVRIAAEQQPRPDLIYLLGNSSGDFTVAK 93
>ref|YP_173422.1| hypothetical protein NitaMp080 [Nicotiana tabacum]
gi|565382489|ref|XP_006357570.1| PREDICTED:
uncharacterized protein LOC102598655 [Solanum tuberosum]
gi|56806586|dbj|BAD83487.1| hypothetical protein
(mitochondrion) [Nicotiana tabacum]
Length = 103
Score = 195 bits (496), Expect = 1e-47
Identities = 90/93 (96%), Positives = 90/93 (96%)
Frame = -3
Query: 280 MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQPREWLRPVCPPLFPTCYGAPGW 101
MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQPREWLRPVCPPLFPTCYG P W
Sbjct: 1 MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQPREWLRPVCPPLFPTCYGTPEW 60
Query: 100 VGAGRVRIAAEQQQRPDLIYLLGNSSGDFTVAK 2
VGAGRVRIAAEQQ RPDLIYLLGNSSGDFTVAK
Sbjct: 61 VGAGRVRIAAEQQPRPDLIYLLGNSSGDFTVAK 93
>ref|YP_005090415.1| orf3 gene product (mitochondrion) [Boea hygrometrica]
gi|340549503|gb|AEK53324.1| hypothetical protein
(mitochondrion) [Boea hygrometrica]
Length = 103
Score = 183 bits (464), Expect = 7e-44
Identities = 85/93 (91%), Positives = 86/93 (92%)
Frame = -3
Query: 280 MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQPREWLRPVCPPLFPTCYGAPGW 101
MRGAVLAFPDQDRSHTCSVRDRPPQLCIDR+ GRHSPQ RE LRPVCPPLFPTCYGAPGW
Sbjct: 1 MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRRGGRHSPQQRECLRPVCPPLFPTCYGAPGW 60
Query: 100 VGAGRVRIAAEQQQRPDLIYLLGNSSGDFTVAK 2
VGAGR R AAEQQ RPDLIYLLGNSS DFTVAK
Sbjct: 61 VGAGRARSAAEQQPRPDLIYLLGNSSSDFTVAK 93
>gb|AGC78860.1| hypothetical protein (mitochondrion) [Vicia faba]
Length = 102
Score = 142 bits (357), Expect = 2e-31
Identities = 74/93 (79%), Positives = 77/93 (82%)
Frame = -3
Query: 280 MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQPREWLRPVCPPLFPTCYGAPGW 101
MRGAVLAFPDQDRSHTCSVRDRP QLCIDRKAGRHSPQ +++ V PP PG
Sbjct: 1 MRGAVLAFPDQDRSHTCSVRDRPTQLCIDRKAGRHSPQGSGYVQYV-PPSSRHAMVPPGG 59
Query: 100 VGAGRVRIAAEQQQRPDLIYLLGNSSGDFTVAK 2
VGAGRVRIAAEQQ RPDLIYLLGNSSGDFTVAK
Sbjct: 60 VGAGRVRIAAEQQPRPDLIYLLGNSSGDFTVAK 92
>ref|YP_588335.1| hypothetical protein ZeamMp073 [Zea mays subsp. mays]
gi|40795119|gb|AAR91163.1| hypothetical protein
(mitochondrion) [Zea mays]
Length = 105
Score = 129 bits (325), Expect = 1e-27
Identities = 68/95 (71%), Positives = 70/95 (73%), Gaps = 2/95 (2%)
Frame = -3
Query: 280 MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQPREWLRPVCPPLFP--TCYGAP 107
M+GAVLA P QDRS TC VRDRPPQLCIDRKAGR SPQP + PL P
Sbjct: 1 MQGAVLALPSQDRSRTCHVRDRPPQLCIDRKAGRQSPQPTGVVTSSMSPLDSRHAMIPHP 60
Query: 106 GWVGAGRVRIAAEQQQRPDLIYLLGNSSGDFTVAK 2
GWVGAGRVRI AEQ QRPD IYLLGNSSGDFTVAK
Sbjct: 61 GWVGAGRVRITAEQLQRPDQIYLLGNSSGDFTVAK 95
>gb|EXC34909.1| hypothetical protein L484_020025 [Morus notabilis]
Length = 62
Score = 128 bits (321), Expect = 3e-27
Identities = 60/62 (96%), Positives = 61/62 (98%)
Frame = +1
Query: 25 MNCRVDRSDPDAAVAPRRYGLDPLLPTPGHHSMSGIRGDILDVTTPLVGGCAALPFDRYT 204
MNCRVDRSD DAAVAPRRYGLDPLLPTPGH+SMSGIRGDILDVTTPLVGGCAALPFDRYT
Sbjct: 1 MNCRVDRSDRDAAVAPRRYGLDPLLPTPGHYSMSGIRGDILDVTTPLVGGCAALPFDRYT 60
Query: 205 VE 210
VE
Sbjct: 61 VE 62
>ref|XP_003588296.1| hypothetical protein MTR_1g005540 [Medicago truncatula]
gi|355477344|gb|AES58547.1| hypothetical protein
MTR_1g005540 [Medicago truncatula]
Length = 90
Score = 111 bits (277), Expect = 4e-22
Identities = 53/55 (96%), Positives = 53/55 (96%)
Frame = -3
Query: 436 SSRGSPVPPTRPLE*FSRYRGALEVGGVLSLLGWALPHKAPPSGHKRPLATHMRG 272
SSRGSPVPPTR LE FSRYRGALEVGGVLSLLGWALPHKAPPSGHKRPLATHMRG
Sbjct: 34 SSRGSPVPPTRLLELFSRYRGALEVGGVLSLLGWALPHKAPPSGHKRPLATHMRG 88
Score = 59.3 bits (142), Expect(2) = 3e-07
Identities = 39/84 (46%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Frame = -1
Query: 516 GDSLPKRRKGWIKKRGYYEPSAPRI-------*PARVVHRFHRLDP*SDSVDTEVRLKWG 358
GDSLPKRRKGWIKKRGYYEPSAPRI P R++ F R + L W
Sbjct: 9 GDSLPKRRKGWIKKRGYYEPSAPRISSRGSPVPPTRLLELFSRYRGALEVGGVLSLLGWA 68
Query: 357 VCCPYWAGPF----PIRPHRRGIS 298
+ P+ A P P+ H RG S
Sbjct: 69 L--PHKAPPSGHKRPLATHMRGRS 90
Score = 22.3 bits (46), Expect(2) = 3e-07
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -2
Query: 668 MSEQAWKNGYGL 633
MSEQAWK G L
Sbjct: 1 MSEQAWKRGDSL 12
>ref|XP_007149660.1| hypothetical protein PHAVU_005G088500g, partial [Phaseolus
vulgaris] gi|561022924|gb|ESW21654.1| hypothetical
protein PHAVU_005G088500g, partial [Phaseolus vulgaris]
Length = 80
Score = 100 bits (249), Expect = 6e-19
Identities = 51/62 (82%), Positives = 54/62 (87%)
Frame = -2
Query: 206 TVYRSKGRAAQPPTKGVVTSSMSPLIPDMLWCPGVGRSGSSPYRRGATAASGSDLSTRQF 27
++ R G AA KGVVTSSMSPLIPDMLWCPGVGRSGSSPYRRGATAASGSDLSTRQ+
Sbjct: 22 SIERQGGTAAP---KGVVTSSMSPLIPDMLWCPGVGRSGSSPYRRGATAASGSDLSTRQY 78
Query: 26 IR 21
IR
Sbjct: 79 IR 80
Score = 64.3 bits (155), Expect = 5e-08
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = -1
Query: 261 PSLTRIAPTPVAFVIGLLNCVSIERQGGTAPNQG 160
PSLTRIAPTPVAFVIGLLNCVSIERQGGTA +G
Sbjct: 1 PSLTRIAPTPVAFVIGLLNCVSIERQGGTAAPKG 34
>gb|EXC21503.1| hypothetical protein L484_014858 [Morus notabilis]
Length = 116
Score = 92.8 bits (229), Expect = 1e-16
Identities = 43/52 (82%), Positives = 45/52 (86%)
Frame = +1
Query: 583 KGPKHGGCRTLEWQRKARPYPFFQACSDIRFPRKIKLVSRVMGNLPARFGEH 738
+G KHG CRTLEWQRK R Y FFQACSDI FP KIKLVSRVMGNLPA+FGEH
Sbjct: 65 EGAKHGRCRTLEWQRKTRSYLFFQACSDIWFPWKIKLVSRVMGNLPAQFGEH 116
>ref|XP_006369813.1| hypothetical protein POPTR_0001s32560g [Populus trichocarpa]
gi|550348715|gb|ERP66382.1| hypothetical protein
POPTR_0001s32560g [Populus trichocarpa]
Length = 80
Score = 81.3 bits (199), Expect = 4e-13
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = +1
Query: 22 RMNCRVDRSDPDAAVAPRRYGLDPLLPTPGHHSMSGIRG 138
RMNCRVDRSDPDAAVAPRRYGLDPLLPTPG+HSMSG+ G
Sbjct: 21 RMNCRVDRSDPDAAVAPRRYGLDPLLPTPGYHSMSGMTG 59
>gb|EEC75928.1| hypothetical protein OsI_13019 [Oryza sativa Indica Group]
Length = 313
Score = 77.8 bits (190), Expect(2) = 3e-12
Identities = 37/41 (90%), Positives = 38/41 (92%)
Frame = -3
Query: 517 R*FTTEAKKRLDQEKGVLRALCPTHLTSSRGSPVPPTRPLE 395
R TTEAKKRLDQEKGVLRALCPTHLTSSRGSPVPPT PL+
Sbjct: 263 RFLTTEAKKRLDQEKGVLRALCPTHLTSSRGSPVPPTSPLD 303
Score = 20.8 bits (42), Expect(2) = 3e-12
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2
Query: 398 RVIQSIQRCA 369
RVI SIQRCA
Sbjct: 304 RVILSIQRCA 313
>gb|EXC08244.1| hypothetical protein L484_012700 [Morus notabilis]
Length = 255
Score = 69.7 bits (169), Expect = 1e-09
Identities = 35/49 (71%), Positives = 37/49 (75%)
Frame = +1
Query: 592 KHGGCRTLEWQRKARPYPFFQACSDIRFPRKIKLVSRVMGNLPARFGEH 738
K G TL+ + Y FFQACSDIRFPRKIKLVSR MGNLPARFGEH
Sbjct: 207 KWTGRTTLKKMQAGMEYLFFQACSDIRFPRKIKLVSRGMGNLPARFGEH 255
>gb|EHK62710.1| hypothetical protein M3S_K09, partial (mitochondrion) [Sorghum
bicolor]
Length = 56
Score = 68.6 bits (166), Expect = 3e-09
Identities = 30/34 (88%), Positives = 30/34 (88%)
Frame = -3
Query: 265 LAFPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQP 164
LA P QDRSHTC VRDRPPQLCIDRKAGR SPQP
Sbjct: 1 LALPSQDRSHTCHVRDRPPQLCIDRKAGRQSPQP 34
>gb|EXB24696.1| hypothetical protein L484_005490 [Morus notabilis]
Length = 1260
Score = 58.9 bits (141), Expect = 2e-06
Identities = 27/30 (90%), Positives = 27/30 (90%)
Frame = +3
Query: 654 GLFGHTVPAEDQVGEPCDGKPSRTVRRALN 743
GLFGHTVP EDQVGE CDGKPS TVRRALN
Sbjct: 326 GLFGHTVPVEDQVGELCDGKPSCTVRRALN 355