BLASTX nr result
ID: Cocculus23_contig00032667
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00032667
(425 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat... 145 7e-33
gb|EYU23563.1| hypothetical protein MIMGU_mgv1a002297mg [Mimulus... 143 3e-32
ref|XP_007163284.1| hypothetical protein PHAVU_001G221600g [Phas... 142 5e-32
ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containi... 142 6e-32
emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera] 142 6e-32
ref|XP_004494504.1| PREDICTED: pentatricopeptide repeat-containi... 141 8e-32
ref|XP_007031275.1| Tetratricopeptide repeat superfamily protein... 140 2e-31
ref|XP_003520781.2| PREDICTED: putative pentatricopeptide repeat... 127 1e-27
ref|XP_002867196.1| pentatricopeptide repeat-containing protein ... 120 3e-25
ref|XP_006285430.1| hypothetical protein CARUB_v10006847mg [Caps... 118 1e-24
ref|XP_004303188.1| PREDICTED: pentatricopeptide repeat-containi... 118 1e-24
emb|CBI18780.3| unnamed protein product [Vitis vinifera] 117 1e-24
ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 117 2e-24
ref|NP_195043.1| pentatricopeptide repeat-containing protein [Ar... 117 2e-24
gb|EXB63452.1| hypothetical protein L484_005415 [Morus notabilis] 115 6e-24
ref|XP_006339454.1| PREDICTED: pentatricopeptide repeat-containi... 115 6e-24
ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containi... 115 6e-24
ref|XP_003617141.1| Pentatricopeptide repeat-containing protein ... 115 6e-24
ref|XP_007225674.1| hypothetical protein PRUPE_ppa002602mg [Prun... 115 8e-24
ref|XP_004250455.1| PREDICTED: pentatricopeptide repeat-containi... 115 8e-24
>ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 556
Score = 145 bits (365), Expect = 7e-33
Identities = 65/75 (86%), Positives = 69/75 (92%)
Frame = +2
Query: 2 EQSLWYHSEKLALAFGLLTLPANAPIRIKKNLRTCGDCHTVMKFASEIFDREIVVRDINR 181
EQSLWYHSEK+ALAFGLL+LPA APIRIKKNLRTCGDCHTVMKFASEIF REI+VRDINR
Sbjct: 482 EQSLWYHSEKIALAFGLLSLPAGAPIRIKKNLRTCGDCHTVMKFASEIFAREIIVRDINR 541
Query: 182 FHRFAGGLCSCRDYW 226
FH F G+CSC DYW
Sbjct: 542 FHHFTNGICSCGDYW 556
>gb|EYU23563.1| hypothetical protein MIMGU_mgv1a002297mg [Mimulus guttatus]
Length = 690
Score = 143 bits (360), Expect = 3e-32
Identities = 64/75 (85%), Positives = 70/75 (93%)
Frame = +2
Query: 2 EQSLWYHSEKLALAFGLLTLPANAPIRIKKNLRTCGDCHTVMKFASEIFDREIVVRDINR 181
E+SLWYHSEKLALA+GLL+LP A IRIKKNLRTCGDCHTVMKFASEIF+REI++RDINR
Sbjct: 616 ERSLWYHSEKLALAYGLLSLPVGATIRIKKNLRTCGDCHTVMKFASEIFEREIILRDINR 675
Query: 182 FHRFAGGLCSCRDYW 226
FHRFAGG CSC DYW
Sbjct: 676 FHRFAGGQCSCGDYW 690
>ref|XP_007163284.1| hypothetical protein PHAVU_001G221600g [Phaseolus vulgaris]
gi|561036748|gb|ESW35278.1| hypothetical protein
PHAVU_001G221600g [Phaseolus vulgaris]
Length = 701
Score = 142 bits (358), Expect = 5e-32
Identities = 64/75 (85%), Positives = 67/75 (89%)
Frame = +2
Query: 2 EQSLWYHSEKLALAFGLLTLPANAPIRIKKNLRTCGDCHTVMKFASEIFDREIVVRDINR 181
EQSLW HSEKLALAFGLL LP +P+RIKKNLRTCGDCHTVMKFASEIF REI+VRDINR
Sbjct: 627 EQSLWCHSEKLALAFGLLVLPPGSPVRIKKNLRTCGDCHTVMKFASEIFQREIIVRDINR 686
Query: 182 FHRFAGGLCSCRDYW 226
FHRF G CSCRDYW
Sbjct: 687 FHRFTNGSCSCRDYW 701
>ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 585
Score = 142 bits (357), Expect = 6e-32
Identities = 64/75 (85%), Positives = 68/75 (90%)
Frame = +2
Query: 2 EQSLWYHSEKLALAFGLLTLPANAPIRIKKNLRTCGDCHTVMKFASEIFDREIVVRDINR 181
EQ LWYHSEKLALAFGLLTLP ++PIRIKKNLRTCG CHTVMK AS+IFDREI+VRDINR
Sbjct: 511 EQGLWYHSEKLALAFGLLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINR 570
Query: 182 FHRFAGGLCSCRDYW 226
FHRFA G CSC DYW
Sbjct: 571 FHRFADGFCSCGDYW 585
>emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 142 bits (357), Expect = 6e-32
Identities = 64/75 (85%), Positives = 68/75 (90%)
Frame = +2
Query: 2 EQSLWYHSEKLALAFGLLTLPANAPIRIKKNLRTCGDCHTVMKFASEIFDREIVVRDINR 181
EQ LWYHSEKLALAFGLLTLP ++PIRIKKNLRTCG CHTVMK AS+IFDREI+VRDINR
Sbjct: 746 EQGLWYHSEKLALAFGLLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINR 805
Query: 182 FHRFAGGLCSCRDYW 226
FHRFA G CSC DYW
Sbjct: 806 FHRFADGFCSCGDYW 820
>ref|XP_004494504.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cicer arietinum]
Length = 641
Score = 141 bits (356), Expect = 8e-32
Identities = 65/75 (86%), Positives = 67/75 (89%)
Frame = +2
Query: 2 EQSLWYHSEKLALAFGLLTLPANAPIRIKKNLRTCGDCHTVMKFASEIFDREIVVRDINR 181
EQSLW HSEKLALA GLL LPA +PIRIKKNLRTCGDCHTVMKFASEIF REI+VRDINR
Sbjct: 567 EQSLWCHSEKLALALGLLVLPAGSPIRIKKNLRTCGDCHTVMKFASEIFRREIIVRDINR 626
Query: 182 FHRFAGGLCSCRDYW 226
FHRF G CSCRDYW
Sbjct: 627 FHRFTNGSCSCRDYW 641
>ref|XP_007031275.1| Tetratricopeptide repeat superfamily protein [Theobroma cacao]
gi|508719880|gb|EOY11777.1| Tetratricopeptide repeat
superfamily protein [Theobroma cacao]
Length = 708
Score = 140 bits (353), Expect = 2e-31
Identities = 62/75 (82%), Positives = 66/75 (88%)
Frame = +2
Query: 2 EQSLWYHSEKLALAFGLLTLPANAPIRIKKNLRTCGDCHTVMKFASEIFDREIVVRDINR 181
EQSLWYHSEK+A AFGLL LPA APIRIKKNLRTCGDCH VMKFASE+F REI++RDINR
Sbjct: 634 EQSLWYHSEKIAFAFGLLALPAGAPIRIKKNLRTCGDCHMVMKFASEVFKREIILRDINR 693
Query: 182 FHRFAGGLCSCRDYW 226
FH F GLCSC DYW
Sbjct: 694 FHHFRNGLCSCSDYW 708
>ref|XP_003520781.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1135
Score = 127 bits (320), Expect = 1e-27
Identities = 59/70 (84%), Positives = 62/70 (88%)
Frame = +2
Query: 2 EQSLWYHSEKLALAFGLLTLPANAPIRIKKNLRTCGDCHTVMKFASEIFDREIVVRDINR 181
EQSLW HSEKLALAFGLL LP +P+RIKKNLRTCGDCHTVMKFASEIF REI+VRDINR
Sbjct: 697 EQSLWCHSEKLALAFGLLVLPPGSPVRIKKNLRTCGDCHTVMKFASEIFQREIIVRDINR 756
Query: 182 FHRFAGGLCS 211
FHRF G CS
Sbjct: 757 FHRFTNGSCS 766
>ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297313032|gb|EFH43455.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 997
Score = 120 bits (300), Expect = 3e-25
Identities = 50/75 (66%), Positives = 63/75 (84%)
Frame = +2
Query: 2 EQSLWYHSEKLALAFGLLTLPANAPIRIKKNLRTCGDCHTVMKFASEIFDREIVVRDINR 181
E++L+YHSEKLA+AFGLL+ P + PIR+ KNLR CGDCH MK+ S+++DREIV+RD NR
Sbjct: 923 ERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYISKVYDREIVLRDANR 982
Query: 182 FHRFAGGLCSCRDYW 226
FHRF G+CSC DYW
Sbjct: 983 FHRFKDGICSCGDYW 997
>ref|XP_006285430.1| hypothetical protein CARUB_v10006847mg [Capsella rubella]
gi|482554135|gb|EOA18328.1| hypothetical protein
CARUB_v10006847mg [Capsella rubella]
Length = 996
Score = 118 bits (295), Expect = 1e-24
Identities = 48/75 (64%), Positives = 63/75 (84%)
Frame = +2
Query: 2 EQSLWYHSEKLALAFGLLTLPANAPIRIKKNLRTCGDCHTVMKFASEIFDREIVVRDINR 181
E++L+YHSEKLA+AFGL++ P + PIR+ KNLR CGDCH MK+ ++++DREIV+RD NR
Sbjct: 922 ERALYYHSEKLAVAFGLMSTPPSTPIRVIKNLRICGDCHNAMKYIAKVYDREIVLRDANR 981
Query: 182 FHRFAGGLCSCRDYW 226
FHRF G+CSC DYW
Sbjct: 982 FHRFKNGICSCGDYW 996
>ref|XP_004303188.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Fragaria vesca subsp. vesca]
Length = 684
Score = 118 bits (295), Expect = 1e-24
Identities = 51/72 (70%), Positives = 58/72 (80%)
Frame = +2
Query: 11 LWYHSEKLALAFGLLTLPANAPIRIKKNLRTCGDCHTVMKFASEIFDREIVVRDINRFHR 190
+WYHSEK+ALAFGL+ +P+ PIRI KNLR CGDCH +KF S I DREI+VRD NRFHR
Sbjct: 613 VWYHSEKIALAFGLIAIPSGLPIRINKNLRICGDCHGAIKFISGIVDREIIVRDNNRFHR 672
Query: 191 FAGGLCSCRDYW 226
F G CSCRDYW
Sbjct: 673 FREGHCSCRDYW 684
>emb|CBI18780.3| unnamed protein product [Vitis vinifera]
Length = 289
Score = 117 bits (294), Expect = 1e-24
Identities = 51/75 (68%), Positives = 58/75 (77%)
Frame = +2
Query: 2 EQSLWYHSEKLALAFGLLTLPANAPIRIKKNLRTCGDCHTVMKFASEIFDREIVVRDINR 181
E+ L YHSEKLALAF LL P +PIRIKKN+R CGDCH +KF S++ DREI+VRD NR
Sbjct: 215 EEKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGDCHAAIKFVSKVVDREIIVRDTNR 274
Query: 182 FHRFAGGLCSCRDYW 226
FHRF G CSC DYW
Sbjct: 275 FHRFRDGSCSCGDYW 289
>ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 117 bits (293), Expect = 2e-24
Identities = 51/75 (68%), Positives = 58/75 (77%)
Frame = +2
Query: 2 EQSLWYHSEKLALAFGLLTLPANAPIRIKKNLRTCGDCHTVMKFASEIFDREIVVRDINR 181
EQ LW+HSEKLA+AFGL+ P APIR+KKNLR C DCHT KF S++ REI+VRDINR
Sbjct: 789 EQLLWHHSEKLAVAFGLIATPPGAPIRVKKNLRVCIDCHTAFKFISKVASREIIVRDINR 848
Query: 182 FHRFAGGLCSCRDYW 226
FH F G CSC DYW
Sbjct: 849 FHHFRDGSCSCGDYW 863
>ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g33170 gi|4455331|emb|CAB36791.1| putative protein
[Arabidopsis thaliana] gi|7270265|emb|CAB80034.1|
putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 117 bits (292), Expect = 2e-24
Identities = 48/75 (64%), Positives = 63/75 (84%)
Frame = +2
Query: 2 EQSLWYHSEKLALAFGLLTLPANAPIRIKKNLRTCGDCHTVMKFASEIFDREIVVRDINR 181
E++L+YHSEKLA+AFGLL+ P + PIR+ KNLR CGDCH MK+ +++++REIV+RD NR
Sbjct: 916 ERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANR 975
Query: 182 FHRFAGGLCSCRDYW 226
FHRF G+CSC DYW
Sbjct: 976 FHRFKDGICSCGDYW 990
>gb|EXB63452.1| hypothetical protein L484_005415 [Morus notabilis]
Length = 678
Score = 115 bits (288), Expect = 6e-24
Identities = 50/72 (69%), Positives = 57/72 (79%)
Frame = +2
Query: 11 LWYHSEKLALAFGLLTLPANAPIRIKKNLRTCGDCHTVMKFASEIFDREIVVRDINRFHR 190
+WYHSEKLALAFGL+ +P PIRI KNLR CGDCH+ +KF S I REI+VRD NRFH+
Sbjct: 607 VWYHSEKLALAFGLVAIPPGVPIRITKNLRICGDCHSAIKFISGIVGREIIVRDNNRFHQ 666
Query: 191 FAGGLCSCRDYW 226
F G CSCRDYW
Sbjct: 667 FKDGKCSCRDYW 678
>ref|XP_006339454.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like isoform X1 [Solanum tuberosum]
gi|565344726|ref|XP_006339455.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g27610-like isoform X2 [Solanum tuberosum]
Length = 797
Score = 115 bits (288), Expect = 6e-24
Identities = 51/75 (68%), Positives = 57/75 (76%)
Frame = +2
Query: 2 EQSLWYHSEKLALAFGLLTLPANAPIRIKKNLRTCGDCHTVMKFASEIFDREIVVRDINR 181
EQSL YHSEKLA+AFGLL +P PIRI KNLR CGDCH MKF S +FDR I++RD N
Sbjct: 723 EQSLSYHSEKLAIAFGLLYVPKGVPIRIYKNLRVCGDCHNAMKFVSRVFDRHIILRDSNC 782
Query: 182 FHRFAGGLCSCRDYW 226
FH F G+CSC DYW
Sbjct: 783 FHHFKEGICSCGDYW 797
>ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Glycine max]
Length = 686
Score = 115 bits (288), Expect = 6e-24
Identities = 50/72 (69%), Positives = 58/72 (80%)
Frame = +2
Query: 11 LWYHSEKLALAFGLLTLPANAPIRIKKNLRTCGDCHTVMKFASEIFDREIVVRDINRFHR 190
+WYHSEK+ALAFGL+TLP PIRI KNLR C DCH+ +KF S+I REI+VRD NRFHR
Sbjct: 615 VWYHSEKIALAFGLITLPRGVPIRITKNLRICIDCHSAIKFISKIVGREIIVRDNNRFHR 674
Query: 191 FAGGLCSCRDYW 226
F G CSC+DYW
Sbjct: 675 FKDGWCSCKDYW 686
>ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518476|gb|AET00100.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 684
Score = 115 bits (288), Expect = 6e-24
Identities = 49/72 (68%), Positives = 57/72 (79%)
Frame = +2
Query: 11 LWYHSEKLALAFGLLTLPANAPIRIKKNLRTCGDCHTVMKFASEIFDREIVVRDINRFHR 190
+WYHSEK+ALAFGL+ LP PIRI KNLR CGDCH+ +KF S I REI+VRD +RFHR
Sbjct: 613 VWYHSEKIALAFGLIALPQGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHR 672
Query: 191 FAGGLCSCRDYW 226
F G CSC+DYW
Sbjct: 673 FKDGCCSCKDYW 684
>ref|XP_007225674.1| hypothetical protein PRUPE_ppa002602mg [Prunus persica]
gi|462422610|gb|EMJ26873.1| hypothetical protein
PRUPE_ppa002602mg [Prunus persica]
Length = 653
Score = 115 bits (287), Expect = 8e-24
Identities = 50/72 (69%), Positives = 56/72 (77%)
Frame = +2
Query: 11 LWYHSEKLALAFGLLTLPANAPIRIKKNLRTCGDCHTVMKFASEIFDREIVVRDINRFHR 190
+WYHSEK+ALAFGL+ +P PIRI KNLR CGDCH +KF S I REI+VRD NRFHR
Sbjct: 582 VWYHSEKIALAFGLIAIPPGVPIRITKNLRICGDCHGAIKFISGIVGREIIVRDNNRFHR 641
Query: 191 FAGGLCSCRDYW 226
F G CSCRDYW
Sbjct: 642 FRDGHCSCRDYW 653
>ref|XP_004250455.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Solanum lycopersicum]
Length = 653
Score = 115 bits (287), Expect = 8e-24
Identities = 49/75 (65%), Positives = 58/75 (77%)
Frame = +2
Query: 2 EQSLWYHSEKLALAFGLLTLPANAPIRIKKNLRTCGDCHTVMKFASEIFDREIVVRDINR 181
E+ L YHSE+LALAF LL P+ +PIRIKKN+R CGDCHT KF S++ DREI++RD NR
Sbjct: 579 EERLQYHSERLALAFALLNSPSGSPIRIKKNIRVCGDCHTAFKFVSKVVDREIILRDTNR 638
Query: 182 FHRFAGGLCSCRDYW 226
FH F G CSC DYW
Sbjct: 639 FHHFRNGSCSCGDYW 653