BLASTX nr result
ID: Cocculus23_contig00032492
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00032492
(304 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007011287.1| OB-fold nucleic acid binding domain-containi... 89 6e-16
ref|XP_007011286.1| OB-fold nucleic acid binding domain-containi... 89 6e-16
ref|XP_007011285.1| OB-fold nucleic acid binding domain-containi... 89 6e-16
ref|XP_007011284.1| OB-fold nucleic acid binding domain-containi... 89 6e-16
ref|XP_007011283.1| OB-fold nucleic acid binding domain-containi... 89 6e-16
ref|XP_007011282.1| OB-fold nucleic acid binding domain-containi... 89 6e-16
ref|XP_007011281.1| OB-fold nucleic acid binding domain-containi... 89 6e-16
ref|XP_007011280.1| OB-fold nucleic acid binding domain-containi... 89 6e-16
ref|XP_002275301.2| PREDICTED: uncharacterized tRNA-binding prot... 82 1e-13
emb|CAN60565.1| hypothetical protein VITISV_013997 [Vitis vinifera] 81 1e-13
ref|XP_002325488.1| hypothetical protein POPTR_0019s08680g [Popu... 76 6e-12
ref|XP_006486160.1| PREDICTED: probable methionine--tRNA ligase-... 75 7e-12
ref|XP_006435931.1| hypothetical protein CICLE_v10031719mg [Citr... 75 7e-12
ref|XP_006294100.1| hypothetical protein CARUB_v10023092mg [Caps... 69 7e-10
ref|XP_002520877.1| methionyl-tRNA synthetase, putative [Ricinus... 67 2e-09
ref|XP_002879883.1| tRNA-binding region domain-containing protei... 65 8e-09
ref|XP_007136419.1| hypothetical protein PHAVU_009G043500g [Phas... 65 1e-08
ref|XP_004146435.1| PREDICTED: probable methionine--tRNA ligase-... 64 2e-08
ref|NP_565938.1| nucleic acid-binding, OB-fold-like protein [Ara... 64 3e-08
ref|XP_004502825.1| PREDICTED: probable methionine--tRNA ligase-... 63 4e-08
>ref|XP_007011287.1| OB-fold nucleic acid binding domain-containing protein isoform 8
[Theobroma cacao] gi|508728200|gb|EOY20097.1| OB-fold
nucleic acid binding domain-containing protein isoform 8
[Theobroma cacao]
Length = 296
Score = 89.0 bits (219), Expect = 6e-16
Identities = 45/89 (50%), Positives = 62/89 (69%)
Frame = +3
Query: 36 ANNSLLNRKQAIVSSLCTHLSLNPQSLPSESVGTNDIKGLFSIVLKLSGHEALLSNNEAM 215
+ N+ R+Q IVSS+C H SL+P++ SE G NDIK L+ +LK SG E+ +N+E M
Sbjct: 4 SGNNDPKRRQLIVSSICKHFSLDPKAFSSEVPG-NDIKNLYLNILKSSGKESPKNNDEVM 62
Query: 216 KWVKFADIFPVESEACKGVIKGLNEDLAQ 302
KW+ FA+ FP +S+AC GV+ LN DLAQ
Sbjct: 63 KWIAFAESFPKDSKACHGVLNELNADLAQ 91
>ref|XP_007011286.1| OB-fold nucleic acid binding domain-containing protein isoform 7
[Theobroma cacao] gi|508728199|gb|EOY20096.1| OB-fold
nucleic acid binding domain-containing protein isoform 7
[Theobroma cacao]
Length = 351
Score = 89.0 bits (219), Expect = 6e-16
Identities = 45/89 (50%), Positives = 62/89 (69%)
Frame = +3
Query: 36 ANNSLLNRKQAIVSSLCTHLSLNPQSLPSESVGTNDIKGLFSIVLKLSGHEALLSNNEAM 215
+ N+ R+Q IVSS+C H SL+P++ SE G NDIK L+ +LK SG E+ +N+E M
Sbjct: 4 SGNNDPKRRQLIVSSICKHFSLDPKAFSSEVPG-NDIKNLYLNILKSSGKESPKNNDEVM 62
Query: 216 KWVKFADIFPVESEACKGVIKGLNEDLAQ 302
KW+ FA+ FP +S+AC GV+ LN DLAQ
Sbjct: 63 KWIAFAESFPKDSKACHGVLNELNADLAQ 91
>ref|XP_007011285.1| OB-fold nucleic acid binding domain-containing protein isoform 6
[Theobroma cacao] gi|508728198|gb|EOY20095.1| OB-fold
nucleic acid binding domain-containing protein isoform 6
[Theobroma cacao]
Length = 343
Score = 89.0 bits (219), Expect = 6e-16
Identities = 45/89 (50%), Positives = 62/89 (69%)
Frame = +3
Query: 36 ANNSLLNRKQAIVSSLCTHLSLNPQSLPSESVGTNDIKGLFSIVLKLSGHEALLSNNEAM 215
+ N+ R+Q IVSS+C H SL+P++ SE G NDIK L+ +LK SG E+ +N+E M
Sbjct: 4 SGNNDPKRRQLIVSSICKHFSLDPKAFSSEVPG-NDIKNLYLNILKSSGKESPKNNDEVM 62
Query: 216 KWVKFADIFPVESEACKGVIKGLNEDLAQ 302
KW+ FA+ FP +S+AC GV+ LN DLAQ
Sbjct: 63 KWIAFAESFPKDSKACHGVLNELNADLAQ 91
>ref|XP_007011284.1| OB-fold nucleic acid binding domain-containing protein isoform 5
[Theobroma cacao] gi|508728197|gb|EOY20094.1| OB-fold
nucleic acid binding domain-containing protein isoform 5
[Theobroma cacao]
Length = 335
Score = 89.0 bits (219), Expect = 6e-16
Identities = 45/89 (50%), Positives = 62/89 (69%)
Frame = +3
Query: 36 ANNSLLNRKQAIVSSLCTHLSLNPQSLPSESVGTNDIKGLFSIVLKLSGHEALLSNNEAM 215
+ N+ R+Q IVSS+C H SL+P++ SE G NDIK L+ +LK SG E+ +N+E M
Sbjct: 4 SGNNDPKRRQLIVSSICKHFSLDPKAFSSEVPG-NDIKNLYLNILKSSGKESPKNNDEVM 62
Query: 216 KWVKFADIFPVESEACKGVIKGLNEDLAQ 302
KW+ FA+ FP +S+AC GV+ LN DLAQ
Sbjct: 63 KWIAFAESFPKDSKACHGVLNELNADLAQ 91
>ref|XP_007011283.1| OB-fold nucleic acid binding domain-containing protein isoform 4
[Theobroma cacao] gi|508728196|gb|EOY20093.1| OB-fold
nucleic acid binding domain-containing protein isoform 4
[Theobroma cacao]
Length = 347
Score = 89.0 bits (219), Expect = 6e-16
Identities = 45/89 (50%), Positives = 62/89 (69%)
Frame = +3
Query: 36 ANNSLLNRKQAIVSSLCTHLSLNPQSLPSESVGTNDIKGLFSIVLKLSGHEALLSNNEAM 215
+ N+ R+Q IVSS+C H SL+P++ SE G NDIK L+ +LK SG E+ +N+E M
Sbjct: 4 SGNNDPKRRQLIVSSICKHFSLDPKAFSSEVPG-NDIKNLYLNILKSSGKESPKNNDEVM 62
Query: 216 KWVKFADIFPVESEACKGVIKGLNEDLAQ 302
KW+ FA+ FP +S+AC GV+ LN DLAQ
Sbjct: 63 KWIAFAESFPKDSKACHGVLNELNADLAQ 91
>ref|XP_007011282.1| OB-fold nucleic acid binding domain-containing protein isoform 3
[Theobroma cacao] gi|508728195|gb|EOY20092.1| OB-fold
nucleic acid binding domain-containing protein isoform 3
[Theobroma cacao]
Length = 390
Score = 89.0 bits (219), Expect = 6e-16
Identities = 45/89 (50%), Positives = 62/89 (69%)
Frame = +3
Query: 36 ANNSLLNRKQAIVSSLCTHLSLNPQSLPSESVGTNDIKGLFSIVLKLSGHEALLSNNEAM 215
+ N+ R+Q IVSS+C H SL+P++ SE G NDIK L+ +LK SG E+ +N+E M
Sbjct: 4 SGNNDPKRRQLIVSSICKHFSLDPKAFSSEVPG-NDIKNLYLNILKSSGKESPKNNDEVM 62
Query: 216 KWVKFADIFPVESEACKGVIKGLNEDLAQ 302
KW+ FA+ FP +S+AC GV+ LN DLAQ
Sbjct: 63 KWIAFAESFPKDSKACHGVLNELNADLAQ 91
>ref|XP_007011281.1| OB-fold nucleic acid binding domain-containing protein isoform 2
[Theobroma cacao] gi|508728194|gb|EOY20091.1| OB-fold
nucleic acid binding domain-containing protein isoform 2
[Theobroma cacao]
Length = 382
Score = 89.0 bits (219), Expect = 6e-16
Identities = 45/89 (50%), Positives = 62/89 (69%)
Frame = +3
Query: 36 ANNSLLNRKQAIVSSLCTHLSLNPQSLPSESVGTNDIKGLFSIVLKLSGHEALLSNNEAM 215
+ N+ R+Q IVSS+C H SL+P++ SE G NDIK L+ +LK SG E+ +N+E M
Sbjct: 4 SGNNDPKRRQLIVSSICKHFSLDPKAFSSEVPG-NDIKNLYLNILKSSGKESPKNNDEVM 62
Query: 216 KWVKFADIFPVESEACKGVIKGLNEDLAQ 302
KW+ FA+ FP +S+AC GV+ LN DLAQ
Sbjct: 63 KWIAFAESFPKDSKACHGVLNELNADLAQ 91
>ref|XP_007011280.1| OB-fold nucleic acid binding domain-containing protein isoform 1
[Theobroma cacao] gi|508728193|gb|EOY20090.1| OB-fold
nucleic acid binding domain-containing protein isoform 1
[Theobroma cacao]
Length = 409
Score = 89.0 bits (219), Expect = 6e-16
Identities = 45/89 (50%), Positives = 62/89 (69%)
Frame = +3
Query: 36 ANNSLLNRKQAIVSSLCTHLSLNPQSLPSESVGTNDIKGLFSIVLKLSGHEALLSNNEAM 215
+ N+ R+Q IVSS+C H SL+P++ SE G NDIK L+ +LK SG E+ +N+E M
Sbjct: 4 SGNNDPKRRQLIVSSICKHFSLDPKAFSSEVPG-NDIKNLYLNILKSSGKESPKNNDEVM 62
Query: 216 KWVKFADIFPVESEACKGVIKGLNEDLAQ 302
KW+ FA+ FP +S+AC GV+ LN DLAQ
Sbjct: 63 KWIAFAESFPKDSKACHGVLNELNADLAQ 91
>ref|XP_002275301.2| PREDICTED: uncharacterized tRNA-binding protein C30C2.04-like
[Vitis vinifera] gi|297736480|emb|CBI25351.3| unnamed
protein product [Vitis vinifera]
Length = 392
Score = 81.6 bits (200), Expect = 1e-13
Identities = 44/95 (46%), Positives = 64/95 (67%)
Frame = +3
Query: 18 MEVNGVANNSLLNRKQAIVSSLCTHLSLNPQSLPSESVGTNDIKGLFSIVLKLSGHEALL 197
M A N +L RKQ+IVSSLC HLSL+P+ +S+ NDIK L + +LK SG A
Sbjct: 1 MATGDAAANVVLRRKQSIVSSLCKHLSLDPKIF-LDSIVENDIKSLCANILKSSGR-APK 58
Query: 198 SNNEAMKWVKFADIFPVESEACKGVIKGLNEDLAQ 302
+++E KW+ FA+ +PV+S+AC G + +NE+LA+
Sbjct: 59 NSDEVSKWISFAESYPVDSKACFGALHVINEELAE 93
>emb|CAN60565.1| hypothetical protein VITISV_013997 [Vitis vinifera]
Length = 523
Score = 81.3 bits (199), Expect = 1e-13
Identities = 44/96 (45%), Positives = 64/96 (66%)
Frame = +3
Query: 15 EMEVNGVANNSLLNRKQAIVSSLCTHLSLNPQSLPSESVGTNDIKGLFSIVLKLSGHEAL 194
+M A N +L RKQ+IVSSLC HLSL+P+ +S+ NDIK L + +LK SG A
Sbjct: 87 KMATGDAAANVVLRRKQSIVSSLCKHLSLDPKIF-LDSIVENDIKSLCANILKSSGR-AP 144
Query: 195 LSNNEAMKWVKFADIFPVESEACKGVIKGLNEDLAQ 302
+++E KW+ FA+ +PV+S AC G + +NE+LA+
Sbjct: 145 KNSDEVSKWISFAESYPVDSXACFGALHVINEELAE 180
>ref|XP_002325488.1| hypothetical protein POPTR_0019s08680g [Populus trichocarpa]
gi|566236850|ref|XP_006371288.1| hypothetical protein
POPTR_0019s08680g [Populus trichocarpa]
gi|222862363|gb|EEE99869.1| hypothetical protein
POPTR_0019s08680g [Populus trichocarpa]
gi|550317036|gb|ERP49085.1| hypothetical protein
POPTR_0019s08680g [Populus trichocarpa]
Length = 425
Score = 75.9 bits (185), Expect = 6e-12
Identities = 40/84 (47%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Frame = +3
Query: 51 LNRKQAIVSSLCTHLSLNPQSLPSESVGTNDIKGLFSIVLKLSGHEA-LLSNNEAMKWVK 227
L RKQ I S+L HLSL+P++ PS +G DIK L+ +LK SG + + E MKW+
Sbjct: 45 LQRKQIISSALSKHLSLSPEA-PSGDLGEYDIKSLYLNILKSSGKRSPSKESEEVMKWIS 103
Query: 228 FADIFPVESEACKGVIKGLNEDLA 299
FA+IFP++S C + GLN+DLA
Sbjct: 104 FAEIFPIDSPTCFDALSGLNKDLA 127
>ref|XP_006486160.1| PREDICTED: probable methionine--tRNA ligase-like [Citrus sinensis]
Length = 408
Score = 75.5 bits (184), Expect = 7e-12
Identities = 45/94 (47%), Positives = 59/94 (62%)
Frame = +3
Query: 18 MEVNGVANNSLLNRKQAIVSSLCTHLSLNPQSLPSESVGTNDIKGLFSIVLKLSGHEALL 197
M NG N + RKQ IVS LC HLSL+ + S + DIK L+S +LK SG
Sbjct: 1 MAANGSKNPT---RKQLIVSILCKHLSLDHKDF-SSNAAEKDIKTLYSDILKSSGKR--- 53
Query: 198 SNNEAMKWVKFADIFPVESEACKGVIKGLNEDLA 299
SN+E MKW++FA+ FP +S+AC V+ LNE+LA
Sbjct: 54 SNDEVMKWIEFAESFPADSKACFDVLIKLNEELA 87
>ref|XP_006435931.1| hypothetical protein CICLE_v10031719mg [Citrus clementina]
gi|557538127|gb|ESR49171.1| hypothetical protein
CICLE_v10031719mg [Citrus clementina]
Length = 402
Score = 75.5 bits (184), Expect = 7e-12
Identities = 45/94 (47%), Positives = 59/94 (62%)
Frame = +3
Query: 18 MEVNGVANNSLLNRKQAIVSSLCTHLSLNPQSLPSESVGTNDIKGLFSIVLKLSGHEALL 197
M NG N + RKQ IVS LC HLSL+ + S + DIK L+S +LK SG
Sbjct: 1 MAANGSKNPT---RKQLIVSILCKHLSLDHKDF-SSNAAEKDIKTLYSDILKSSGKR--- 53
Query: 198 SNNEAMKWVKFADIFPVESEACKGVIKGLNEDLA 299
SN+E MKW++FA+ FP +S+AC V+ LNE+LA
Sbjct: 54 SNDEVMKWIEFAESFPADSKACFDVLIKLNEELA 87
>ref|XP_006294100.1| hypothetical protein CARUB_v10023092mg [Capsella rubella]
gi|482562808|gb|EOA26998.1| hypothetical protein
CARUB_v10023092mg [Capsella rubella]
Length = 489
Score = 68.9 bits (167), Expect = 7e-10
Identities = 34/80 (42%), Positives = 50/80 (62%)
Frame = +3
Query: 60 KQAIVSSLCTHLSLNPQSLPSESVGTNDIKGLFSIVLKLSGHEALLSNNEAMKWVKFADI 239
KQ I+S+LC H SL+P++ +D+K L+S VLK SG E NNE +KW+ F++
Sbjct: 108 KQMILSALCKHFSLDPENFLG-GASQSDVKTLYSNVLKASGKEVSAQNNEVLKWLDFSEA 166
Query: 240 FPVESEACKGVIKGLNEDLA 299
FP S+ C ++ LN +LA
Sbjct: 167 FPAISKDCFAALEKLNVELA 186
>ref|XP_002520877.1| methionyl-tRNA synthetase, putative [Ricinus communis]
gi|223540008|gb|EEF41586.1| methionyl-tRNA synthetase,
putative [Ricinus communis]
Length = 391
Score = 67.4 bits (163), Expect = 2e-09
Identities = 41/90 (45%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Frame = +3
Query: 36 ANNSL-LNRKQAIVSSLCTHLSLNPQSLPSESVGTNDIKGLFSIVLKLSGH-EALLSNNE 209
AN S+ L R Q I S+L HLSL+ + SE G +DIK L+ +LK SG N+E
Sbjct: 4 ANESITLKRNQLIASALSKHLSLHSGTSLSECRG-DDIKSLYVNILKSSGKWSQQKENDE 62
Query: 210 AMKWVKFADIFPVESEACKGVIKGLNEDLA 299
MKW+ FA+ FPV++ AC + GLN+ LA
Sbjct: 63 VMKWIDFAESFPVDTSACFNALNGLNQHLA 92
>ref|XP_002879883.1| tRNA-binding region domain-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297325722|gb|EFH56142.1| tRNA-binding
region domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 389
Score = 65.5 bits (158), Expect = 8e-09
Identities = 33/80 (41%), Positives = 49/80 (61%)
Frame = +3
Query: 60 KQAIVSSLCTHLSLNPQSLPSESVGTNDIKGLFSIVLKLSGHEALLSNNEAMKWVKFADI 239
KQ I+S+LC H SL+P+ G +D++ L+S VLK SG E N+E +KW+ FA+
Sbjct: 6 KQMILSALCKHFSLDPEPFLG-GAGDSDVRTLYSNVLKASGKEVSAQNDEVLKWLDFAEG 64
Query: 240 FPVESEACKGVIKGLNEDLA 299
F S+ C ++ LN +LA
Sbjct: 65 FSANSKDCYAALEKLNLELA 84
>ref|XP_007136419.1| hypothetical protein PHAVU_009G043500g [Phaseolus vulgaris]
gi|561009506|gb|ESW08413.1| hypothetical protein
PHAVU_009G043500g [Phaseolus vulgaris]
Length = 389
Score = 65.1 bits (157), Expect = 1e-08
Identities = 35/85 (41%), Positives = 59/85 (69%)
Frame = +3
Query: 45 SLLNRKQAIVSSLCTHLSLNPQSLPSESVGTNDIKGLFSIVLKLSGHEALLSNNEAMKWV 224
S+ +RK+++V +LC +LSL+P +P+ES+ + DIK L+ + +GH S+ E +KWV
Sbjct: 3 SVDSRKKSVVLALCKYLSLDPSVVPAESLDS-DIKSLYLKIKAENGHGDNHSD-EVLKWV 60
Query: 225 KFADIFPVESEACKGVIKGLNEDLA 299
FA+ FPV ++AC +K LN++L+
Sbjct: 61 AFAEAFPVANDACLENLKRLNDELS 85
>ref|XP_004146435.1| PREDICTED: probable methionine--tRNA ligase-like [Cucumis sativus]
gi|449491630|ref|XP_004158957.1| PREDICTED: probable
methionine--tRNA ligase-like [Cucumis sativus]
Length = 392
Score = 63.9 bits (154), Expect = 2e-08
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
Frame = +3
Query: 33 VANN-SLLNRKQAIVSSLCTHLSLNPQSLPSESVGTNDIKGLFSIVLKLSGHEALLSNN- 206
VAN S L+RKQ + S+L H +L+ +L E+ D + +LK S + A + +N
Sbjct: 2 VANGGSALDRKQLVASALAKHFALDHNALIGENAEC-DFRAYVLNILKASRNGASVDDNI 60
Query: 207 EAMKWVKFADIFPVESEACKGVIKGLNEDLA 299
E KW+ FAD FPV+S+AC V+K LNE+LA
Sbjct: 61 EVTKWITFADSFPVDSKACFDVLKQLNEELA 91
>ref|NP_565938.1| nucleic acid-binding, OB-fold-like protein [Arabidopsis thaliana]
gi|14334468|gb|AAK59432.1| putative methionyl-tRNA
synthetase [Arabidopsis thaliana]
gi|16323444|gb|AAL15216.1| putative methionyl-tRNA
synthetase [Arabidopsis thaliana]
gi|330254767|gb|AEC09861.1| nucleic acid-binding,
OB-fold-like protein [Arabidopsis thaliana]
Length = 389
Score = 63.5 bits (153), Expect = 3e-08
Identities = 34/80 (42%), Positives = 49/80 (61%)
Frame = +3
Query: 60 KQAIVSSLCTHLSLNPQSLPSESVGTNDIKGLFSIVLKLSGHEALLSNNEAMKWVKFADI 239
KQ I+S+LC H SL+P+ G +DIK L+S VLK SG E NN+ +KW+ FA+
Sbjct: 6 KQMILSALCKHFSLDPEPFVG-GAGESDIKTLYSNVLKASGKEVSAQNNDVLKWLDFAEG 64
Query: 240 FPVESEACKGVIKGLNEDLA 299
F +S+ ++ LN +LA
Sbjct: 65 FSSDSKDWFSALEKLNLELA 84
>ref|XP_004502825.1| PREDICTED: probable methionine--tRNA ligase-like isoform X2 [Cicer
arietinum]
Length = 385
Score = 63.2 bits (152), Expect = 4e-08
Identities = 35/85 (41%), Positives = 56/85 (65%)
Frame = +3
Query: 45 SLLNRKQAIVSSLCTHLSLNPQSLPSESVGTNDIKGLFSIVLKLSGHEALLSNNEAMKWV 224
S+ NRK+++V +L HLSL+P +P++S+ DIK L+ + SG E S+ E +KWV
Sbjct: 3 SVDNRKKSVVLALSKHLSLDPSVIPADSLD-GDIKTLYLNITAASGQEVNHSD-EVLKWV 60
Query: 225 KFADIFPVESEACKGVIKGLNEDLA 299
+FA+ PV +AC +K LN++L+
Sbjct: 61 EFAESLPVALDACFESLKRLNDELS 85