BLASTX nr result
ID: Cocculus23_contig00032172
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00032172
(1295 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAV32158.1| putative polyprotein [Oryza sativa Japonica Group] 59 1e-08
emb|CAE04652.2| OSJNBa0061G20.8 [Oryza sativa Japonica Group] 58 2e-08
emb|CAH66687.1| OSIGBa0097A15.2 [Oryza sativa Indica Group] 58 2e-08
ref|XP_007032315.1| Uncharacterized protein TCM_017930 [Theobrom... 62 2e-08
ref|XP_006849815.1| hypothetical protein AMTR_s01849p00006620 [A... 52 3e-08
ref|XP_007214193.1| hypothetical protein PRUPE_ppa021406mg [Prun... 61 3e-08
emb|CAE02841.3| OSJNBa0014F04.7 [Oryza sativa Japonica Group] 56 4e-08
gb|ABA98110.1| retrotransposon protein, putative, Ty3-gypsy subc... 55 5e-08
gb|AAU44115.1| putative polyprotein [Oryza sativa Japonica Group] 54 7e-08
emb|CAH66015.1| OSIGBa0093M15.5 [Oryza sativa Indica Group] 55 9e-08
gb|AAP50978.1| putative polyprotein [Oryza sativa Japonica Group... 58 1e-07
emb|CAH66097.1| OSIGBa0114I04.4 [Oryza sativa Indica Group] 55 1e-07
emb|CAH66257.1| OSIGBa0139I12.6 [Oryza sativa Indica Group] 54 1e-07
gb|AAM74253.1|AC074355_15 Putative retroelement [Oryza sativa Ja... 54 2e-07
dbj|BAH80065.1| putative retrotransposon protein [Oryza sativa I... 56 2e-07
emb|CAE03652.2| OSJNBa0060N03.17 [Oryza sativa Japonica Group] 57 2e-07
emb|CAN62233.1| hypothetical protein VITISV_010121 [Vitis vinifera] 64 2e-07
emb|CAE02081.2| OSJNBa0074B10.9 [Oryza sativa Japonica Group] 54 2e-07
gb|AAM14693.1|AC097446_22 Putative polyprotein [Oryza sativa Jap... 54 2e-07
emb|CAH66018.1| OSIGBa0105N24.2 [Oryza sativa Indica Group] 52 2e-07
>gb|AAV32158.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1131
Score = 59.3 bits (142), Expect(3) = 1e-08
Identities = 37/119 (31%), Positives = 59/119 (49%)
Frame = -3
Query: 1074 CTFSELRIKDKVLLADLLVMNLEDYDIILGLDWLVLYNAQIDCRKKKGNLSLPSGQTLTI 895
CT + I++ L+ L+ + +D D+ILG+DWL + IDC +K L+ +GQT++
Sbjct: 403 CTSVTIEIEEIPFLSSLISLESKDLDVILGMDWLTRHRGVIDCANRKVTLTSSNGQTVSF 462
Query: 894 *GT*QNHQVSSYNPKGILVWTTKI*VRNLFSLL*TLARVEEISIVQGFTLVFLEDLPGL 718
VSS P G+ + ++EI IV+ + VF EDLPG+
Sbjct: 463 -------FVSSPKPHGLTL---------------NQVALQEIPIVRDYPDVFPEDLPGM 499
Score = 24.6 bits (52), Expect(3) = 1e-08
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 730 PPRSTSIREFDFVIDLVTGTHPV 662
PP+ R+ +F IDLV GT+P+
Sbjct: 500 PPK----RDIEFRIDLVPGTNPI 518
Score = 22.7 bits (47), Expect(3) = 1e-08
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -1
Query: 1211 ILFDSNATYSFIA 1173
+LFDS AT+SF++
Sbjct: 358 VLFDSGATHSFLS 370
>emb|CAE04652.2| OSJNBa0061G20.8 [Oryza sativa Japonica Group]
Length = 1598
Score = 57.8 bits (138), Expect(3) = 2e-08
Identities = 36/114 (31%), Positives = 58/114 (50%)
Frame = -3
Query: 1059 LRIKDKVLLADLLVMNLEDYDIILGLDWLVLYNAQIDCRKKKGNLSLPSGQTLTI*GT*Q 880
+ I+ LA+L+++ +D D+ILG+DWL Y IDC +K L+ G+ +T+
Sbjct: 552 IEIQGVPFLANLILLESKDLDVILGMDWLARYKGMIDCANRKVTLTSNDGRVVTV----- 606
Query: 879 NHQVSSYNPKGILVWTTKI*VRNLFSLL*TLARVEEISIVQGFTLVFLEDLPGL 718
H +SS + + L T +EEI IV+ + VF +DLPG+
Sbjct: 607 -HALSSESLRSSLNQMT----------------LEEIPIVREYPDVFPDDLPGM 643
Score = 25.8 bits (55), Expect(3) = 2e-08
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 730 PPRSTSIREFDFVIDLVTGTHPV 662
PP+ R+ +F+IDLV GT P+
Sbjct: 644 PPK----RDIEFIIDLVPGTTPI 662
Score = 22.7 bits (47), Expect(3) = 2e-08
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -1
Query: 1211 ILFDSNATYSFIAASVV*HLPLHTEIFRK 1125
+LF+S AT+SF++ S + + E R+
Sbjct: 502 VLFNSGATHSFLSMSFAGNHGMEVEDLRR 530
>emb|CAH66687.1| OSIGBa0097A15.2 [Oryza sativa Indica Group]
Length = 1560
Score = 57.8 bits (138), Expect(3) = 2e-08
Identities = 36/114 (31%), Positives = 58/114 (50%)
Frame = -3
Query: 1059 LRIKDKVLLADLLVMNLEDYDIILGLDWLVLYNAQIDCRKKKGNLSLPSGQTLTI*GT*Q 880
+ I+ LA+L+++ +D D+ILG+DWL Y IDC +K L+ G+ +T+
Sbjct: 552 IEIQGVPFLANLILLESKDLDVILGMDWLARYKGMIDCANRKVTLTSNDGRVVTV----- 606
Query: 879 NHQVSSYNPKGILVWTTKI*VRNLFSLL*TLARVEEISIVQGFTLVFLEDLPGL 718
H +SS + + L T +EEI IV+ + VF +DLPG+
Sbjct: 607 -HALSSESLRSSLNQMT----------------LEEIPIVREYPDVFPDDLPGM 643
Score = 25.8 bits (55), Expect(3) = 2e-08
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 730 PPRSTSIREFDFVIDLVTGTHPV 662
PP+ R+ +F+IDLV GT P+
Sbjct: 644 PPK----RDIEFIIDLVPGTTPI 662
Score = 22.7 bits (47), Expect(3) = 2e-08
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -1
Query: 1211 ILFDSNATYSFIAASVV*HLPLHTEIFRK 1125
+LF+S AT+SF++ S + + E R+
Sbjct: 502 VLFNSGATHSFLSMSFAGNHGMEVEDLRR 530
>ref|XP_007032315.1| Uncharacterized protein TCM_017930 [Theobroma cacao]
gi|508711344|gb|EOY03241.1| Uncharacterized protein
TCM_017930 [Theobroma cacao]
Length = 234
Score = 62.4 bits (150), Expect(2) = 2e-08
Identities = 41/122 (33%), Positives = 63/122 (51%), Gaps = 8/122 (6%)
Frame = -3
Query: 1059 LRIKDKVLLADLLVMNLEDYDIILGLDWLVLYNAQIDCRKKKGNLSLPSGQTLTI*GT*Q 880
+R+KDK L +L+V+N D+D+ILG+DWL Y+A +DC K P+ +I G
Sbjct: 81 VRVKDKDTLVNLVVLNTLDFDVILGMDWLSPYHASVDCYHKLLRFDFPNEPPFSIQGDRS 140
Query: 879 NHQVSSYNPKGILVWTTKI*VRNLFSLL*TLAR--------VEEISIVQGFTLVFLEDLP 724
N + I V +T+ +R S + R + ++S+V F VFLE+LP
Sbjct: 141 NAPTNL-----ISVMSTRRLLRQDCSGYLAMVRDTQVKVGDISQVSVVNEFMDVFLEELP 195
Query: 723 GL 718
L
Sbjct: 196 SL 197
Score = 24.6 bits (52), Expect(2) = 2e-08
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -2
Query: 709 REFDFVIDLVTGTHPVAI 656
RE +F IDL+ T P++I
Sbjct: 201 REIEFCIDLIPDTRPISI 218
>ref|XP_006849815.1| hypothetical protein AMTR_s01849p00006620 [Amborella trichopoda]
gi|548853397|gb|ERN11396.1| hypothetical protein
AMTR_s01849p00006620 [Amborella trichopoda]
Length = 383
Score = 52.0 bits (123), Expect(2) = 3e-08
Identities = 24/57 (42%), Positives = 37/57 (64%)
Frame = -3
Query: 1059 LRIKDKVLLADLLVMNLEDYDIILGLDWLVLYNAQIDCRKKKGNLSLPSGQTLTI*G 889
+RI + L DL+V++L D+D+ILG+D+L Y A IDC++KK + G+T G
Sbjct: 327 VRIDGRELFVDLIVLDLFDFDVILGMDFLTKYGASIDCKQKKVVFTPEDGETFEFRG 383
Score = 34.3 bits (77), Expect(2) = 3e-08
Identities = 14/28 (50%), Positives = 23/28 (82%)
Frame = -1
Query: 1214 QILFDSNATYSFIAASVV*HLPLHTEIF 1131
++LFDS AT+SFIA+++V H+ +E+F
Sbjct: 275 KVLFDSGATHSFIASTIVNHINAPSELF 302
>ref|XP_007214193.1| hypothetical protein PRUPE_ppa021406mg [Prunus persica]
gi|462410058|gb|EMJ15392.1| hypothetical protein
PRUPE_ppa021406mg [Prunus persica]
Length = 881
Score = 60.8 bits (146), Expect(2) = 3e-08
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Frame = -3
Query: 1095 CVPIKLKCTFSELRIKDKVLLADLLVMNLEDYDIILGLDWLVLYNAQIDCRKKKGNLSLP 916
CV + C + I D L+ DL+++ YD+ILG+D L + A +DC KK ++L
Sbjct: 251 CVEVNKLCRSCTIEISDHKLVVDLMILKFMVYDVILGMDMLTQFKAILDCGKKMVTMTLS 310
Query: 915 SGQTLTI*GT*QNHQVSSYNPKGILVWTTKI*VRNLFSLL*TLA-------RVEEISIVQ 757
G+T + G ++ PK IL N L+ +A ++E I IV+
Sbjct: 311 KGKTFSFYG-----NRNTCKPKSILDNRN----CNYLRLIAHMANKDLGDPKLELIPIVK 361
Query: 756 GFTLVFLEDLPGL 718
F VFLE+L GL
Sbjct: 362 NFNDVFLEELSGL 374
Score = 25.0 bits (53), Expect(2) = 3e-08
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1
Query: 1214 QILFDSNATYSFIAASVV*HLPLHTEIFRKS 1122
+ILFD AT SFI+ S L L E + S
Sbjct: 211 RILFDPGATNSFISVSFASILGLEYEFMKSS 241
>emb|CAE02841.3| OSJNBa0014F04.7 [Oryza sativa Japonica Group]
Length = 1625
Score = 55.8 bits (133), Expect(3) = 4e-08
Identities = 35/117 (29%), Positives = 59/117 (50%)
Frame = -3
Query: 1068 FSELRIKDKVLLADLLVMNLEDYDIILGLDWLVLYNAQIDCRKKKGNLSLPSGQTLTI*G 889
F + I+ LA+L+++ +D D+ILG+DWL + IDC +K L+ G+ +T+
Sbjct: 734 FVRIEIQGVPFLANLILLESKDLDVILGMDWLARHKGVIDCANRKVTLTSNDGRVVTV-- 791
Query: 888 T*QNHQVSSYNPKGILVWTTKI*VRNLFSLL*TLARVEEISIVQGFTLVFLEDLPGL 718
H +SS + + L T +EEI +V+ + VF +DLPG+
Sbjct: 792 ----HALSSESLRSRLNQIT----------------LEEIPVVREYPDVFPDDLPGM 828
Score = 24.6 bits (52), Expect(3) = 4e-08
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 1211 ILFDSNATYSFIAASVV*HLPLHTEIFRK 1125
+LFDS AT+SF++ S + + E R+
Sbjct: 687 VLFDSGATHSFVSMSFAGNDGMEVEDLRR 715
Score = 24.3 bits (51), Expect(3) = 4e-08
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 730 PPRSTSIREFDFVIDLVTGTHPV 662
PP+ R+ +F IDLV+GT P+
Sbjct: 829 PPK----RDIEFRIDLVSGTTPI 847
>gb|ABA98110.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1226
Score = 55.5 bits (132), Expect(3) = 5e-08
Identities = 34/119 (28%), Positives = 60/119 (50%)
Frame = -3
Query: 1074 CTFSELRIKDKVLLADLLVMNLEDYDIILGLDWLVLYNAQIDCRKKKGNLSLPSGQTLTI 895
C + + I++ + L+++ +D D+ILG+DWL + IDC +K L+ +G+T++
Sbjct: 428 CPSATIEIEEVPFPSSLILLESKDLDVILGMDWLSRHRGVIDCANRKVTLTSSNGETVSF 487
Query: 894 *GT*QNHQVSSYNPKGILVWTTKI*VRNLFSLL*TLARVEEISIVQGFTLVFLEDLPGL 718
VSS +G+++ ++EI IVQ + VF EDLPG+
Sbjct: 488 -------FVSSPKYRGVIL---------------NQVALQEIPIVQDYPDVFPEDLPGM 524
Score = 25.0 bits (53), Expect(3) = 5e-08
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 730 PPRSTSIREFDFVIDLVTGTHPV 662
PP+ R+ +F IDLV GT+P+
Sbjct: 525 PPK----RDIEFQIDLVPGTNPI 543
Score = 23.9 bits (50), Expect(3) = 5e-08
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -1
Query: 1211 ILFDSNATYSFIAAS 1167
+LFDS AT+SF++ S
Sbjct: 383 VLFDSGATHSFLSKS 397
>gb|AAU44115.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1717
Score = 54.3 bits (129), Expect(3) = 7e-08
Identities = 33/119 (27%), Positives = 59/119 (49%)
Frame = -3
Query: 1074 CTFSELRIKDKVLLADLLVMNLEDYDIILGLDWLVLYNAQIDCRKKKGNLSLPSGQTLTI 895
C + + I++ + L+++ +D D+ILG+DWL + IDC +K L+ +G+T++
Sbjct: 690 CPSATIEIEEVPFPSSLILLESKDLDVILGMDWLSCHRGVIDCANRKVTLTSSNGETVSF 749
Query: 894 *GT*QNHQVSSYNPKGILVWTTKI*VRNLFSLL*TLARVEEISIVQGFTLVFLEDLPGL 718
+SS G+++ ++EI IVQ + VF EDLPG+
Sbjct: 750 -------FMSSPKSHGVIL---------------NQVALQEIPIVQDYPDVFPEDLPGM 786
Score = 25.8 bits (55), Expect(3) = 7e-08
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2
Query: 730 PPRSTSIREFDFVIDLVTGTHPV 662
PP+ RE +F IDLV GT+P+
Sbjct: 787 PPK----REIEFRIDLVPGTNPI 805
Score = 23.9 bits (50), Expect(3) = 7e-08
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -1
Query: 1211 ILFDSNATYSFIAAS 1167
+LFDS AT+SF++ S
Sbjct: 645 VLFDSGATHSFLSKS 659
>emb|CAH66015.1| OSIGBa0093M15.5 [Oryza sativa Indica Group]
Length = 986
Score = 55.1 bits (131), Expect(3) = 9e-08
Identities = 34/119 (28%), Positives = 60/119 (50%)
Frame = -3
Query: 1074 CTFSELRIKDKVLLADLLVMNLEDYDIILGLDWLVLYNAQIDCRKKKGNLSLPSGQTLTI 895
C + I++ + + L+++ +D D+ILG+DWL + IDC +K L+ +G+T++
Sbjct: 430 CPSVTIEIEEVLFPSSLILLESKDLDVILGMDWLSRHRGVIDCANRKVTLTNSNGETVSF 489
Query: 894 *GT*QNHQVSSYNPKGILVWTTKI*VRNLFSLL*TLARVEEISIVQGFTLVFLEDLPGL 718
+ +PK V ++ ++EI IVQ + VFLEDLPG+
Sbjct: 490 ---------FASSPKSHGVTLNQV-------------ALQEIPIVQDYPDVFLEDLPGM 526
Score = 24.6 bits (52), Expect(3) = 9e-08
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 730 PPRSTSIREFDFVIDLVTGTHPV 662
PP+ R+ +F IDLV GT+P+
Sbjct: 527 PPK----RDIEFRIDLVPGTNPI 545
Score = 23.9 bits (50), Expect(3) = 9e-08
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -1
Query: 1211 ILFDSNATYSFIAAS 1167
+LFDS AT+SF++ S
Sbjct: 385 VLFDSGATHSFLSKS 399
>gb|AAP50978.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108710193|gb|ABF97988.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1564
Score = 58.2 bits (139), Expect(2) = 1e-07
Identities = 36/114 (31%), Positives = 58/114 (50%)
Frame = -3
Query: 1059 LRIKDKVLLADLLVMNLEDYDIILGLDWLVLYNAQIDCRKKKGNLSLPSGQTLTI*GT*Q 880
+ I++ LA+L+++ +D D+ILG+DWL Y IDC +K L+ GQ + +
Sbjct: 569 IEIQEVTFLANLILLESKDLDVILGMDWLARYKGVIDCANRKVTLTSNDGQVVIV----- 623
Query: 879 NHQVSSYNPKGILVWTTKI*VRNLFSLL*TLARVEEISIVQGFTLVFLEDLPGL 718
H +SS + + L T +EEI IV+ + VF +DLPG+
Sbjct: 624 -HALSSESLRSSLNQMT----------------LEEIPIVREYPDVFPDDLPGM 660
Score = 26.2 bits (56), Expect(2) = 1e-07
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 1211 ILFDSNATYSFIAASVV*HLPLHTEIFRK 1125
+LFDS AT+SF++ S V + + E R+
Sbjct: 519 VLFDSGATHSFLSMSFVGNHGMEVEDLRR 547
>emb|CAH66097.1| OSIGBa0114I04.4 [Oryza sativa Indica Group]
Length = 1455
Score = 55.1 bits (131), Expect(3) = 1e-07
Identities = 34/119 (28%), Positives = 59/119 (49%)
Frame = -3
Query: 1074 CTFSELRIKDKVLLADLLVMNLEDYDIILGLDWLVLYNAQIDCRKKKGNLSLPSGQTLTI 895
C + + I++ + L+++ +D D+ILG+DWL + IDC +K L+ +G+T++
Sbjct: 432 CPSATIEIEEVPFPSSLILLESKDLDVILGMDWLSRHRGVIDCANRKVTLTSSNGETVSF 491
Query: 894 *GT*QNHQVSSYNPKGILVWTTKI*VRNLFSLL*TLARVEEISIVQGFTLVFLEDLPGL 718
VSS G+++ ++EI IVQ + VF EDLPG+
Sbjct: 492 -------FVSSPKSHGVIL---------------NQVALQEIPIVQDYPDVFPEDLPGM 528
Score = 24.6 bits (52), Expect(3) = 1e-07
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 730 PPRSTSIREFDFVIDLVTGTHPV 662
PP+ R+ +F IDLV GT+P+
Sbjct: 529 PPK----RDIEFRIDLVPGTNPI 547
Score = 23.5 bits (49), Expect(3) = 1e-07
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -1
Query: 1211 ILFDSNATYSFIAAS 1167
+LFDS AT+SF++ S
Sbjct: 387 VLFDSGATHSFMSKS 401
>emb|CAH66257.1| OSIGBa0139I12.6 [Oryza sativa Indica Group]
Length = 1443
Score = 54.3 bits (129), Expect(3) = 1e-07
Identities = 33/119 (27%), Positives = 58/119 (48%)
Frame = -3
Query: 1074 CTFSELRIKDKVLLADLLVMNLEDYDIILGLDWLVLYNAQIDCRKKKGNLSLPSGQTLTI 895
C + I++ + + L+++ +D D+ILG+DWL + IDC +K L+ SG+T++
Sbjct: 392 CPSVTIEIEEVLFPSSLILLESKDLDVILGMDWLSRHRGVIDCANRKVTLTSSSGETVSF 451
Query: 894 *GT*QNHQVSSYNPKGILVWTTKI*VRNLFSLL*TLARVEEISIVQGFTLVFLEDLPGL 718
SS G+++ ++EI +VQ + VF EDLPG+
Sbjct: 452 -------FASSPKSHGVIL---------------NQVALQEIPVVQDYPDVFPEDLPGM 488
Score = 24.6 bits (52), Expect(3) = 1e-07
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 730 PPRSTSIREFDFVIDLVTGTHPV 662
PP+ R+ +F IDLV GT+P+
Sbjct: 489 PPK----RDIEFRIDLVPGTNPI 507
Score = 23.9 bits (50), Expect(3) = 1e-07
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -1
Query: 1211 ILFDSNATYSFIAAS 1167
+LFDS AT+SF++ S
Sbjct: 347 VLFDSGATHSFLSKS 361
>gb|AAM74253.1|AC074355_15 Putative retroelement [Oryza sativa Japonica Group]
gi|31430430|gb|AAP52347.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1140
Score = 54.3 bits (129), Expect(3) = 2e-07
Identities = 34/119 (28%), Positives = 59/119 (49%)
Frame = -3
Query: 1074 CTFSELRIKDKVLLADLLVMNLEDYDIILGLDWLVLYNAQIDCRKKKGNLSLPSGQTLTI 895
C + + I++ + L+++ +D D+ILG+DWL + IDC +K L+ +G+T++
Sbjct: 292 CPSATIEIEEVPFPSSLILLESKDLDVILGMDWLSRHRGVIDCANRKVTLTSSNGETVSF 351
Query: 894 *GT*QNHQVSSYNPKGILVWTTKI*VRNLFSLL*TLARVEEISIVQGFTLVFLEDLPGL 718
VSS G+++ ++EI IVQ + VF EDLPG+
Sbjct: 352 -------FVSSPKYHGVIL---------------NQVALQEIPIVQDYPDVFPEDLPGM 388
Score = 24.6 bits (52), Expect(3) = 2e-07
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 730 PPRSTSIREFDFVIDLVTGTHPV 662
PP+ R+ +F IDLV GT+P+
Sbjct: 389 PPK----RDIEFRIDLVPGTNPI 407
Score = 23.9 bits (50), Expect(3) = 2e-07
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -1
Query: 1211 ILFDSNATYSFIAAS 1167
+LFDS AT+SF++ S
Sbjct: 247 VLFDSGATHSFLSKS 261
>dbj|BAH80065.1| putative retrotransposon protein [Oryza sativa Indica Group]
Length = 821
Score = 55.8 bits (133), Expect(3) = 2e-07
Identities = 34/119 (28%), Positives = 61/119 (51%)
Frame = -3
Query: 1074 CTFSELRIKDKVLLADLLVMNLEDYDIILGLDWLVLYNAQIDCRKKKGNLSLPSGQTLTI 895
C + + I++ + + L+++ +D D+ILG+DWL + IDC +K L+ +G+T++
Sbjct: 221 CPSATIEIEEVLFPSSLILLESKDLDVILGMDWLSRHRGVIDCANRKVTLTSSNGETVSF 280
Query: 894 *GT*QNHQVSSYNPKGILVWTTKI*VRNLFSLL*TLARVEEISIVQGFTLVFLEDLPGL 718
VSS G+++ ++EI IVQ ++ VF EDLPG+
Sbjct: 281 -------FVSSPKYHGVVL---------------NQVALQEIPIVQDYSDVFPEDLPGM 317
Score = 24.6 bits (52), Expect(3) = 2e-07
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 730 PPRSTSIREFDFVIDLVTGTHPV 662
PP+ R+ +F IDLV GT+P+
Sbjct: 318 PPK----RDIEFRIDLVPGTNPI 336
Score = 22.3 bits (46), Expect(3) = 2e-07
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -1
Query: 1211 ILFDSNATYSFIAAS 1167
+ FDS AT+SF++ S
Sbjct: 176 VFFDSGATHSFLSKS 190
>emb|CAE03652.2| OSJNBa0060N03.17 [Oryza sativa Japonica Group]
Length = 1634
Score = 57.4 bits (137), Expect(2) = 2e-07
Identities = 37/114 (32%), Positives = 59/114 (51%)
Frame = -3
Query: 1059 LRIKDKVLLADLLVMNLEDYDIILGLDWLVLYNAQIDCRKKKGNLSLPSGQTLTI*GT*Q 880
+ I+ LA+L+++ +D D+ILG+DWL + IDC KK L+ G+ +T+
Sbjct: 664 IEIQGVPFLANLILLESKDLDVILGMDWLARHKGVIDCANKKVTLTSYDGRVVTV----- 718
Query: 879 NHQVSSYNPKGILVWTTKI*VRNLFSLL*TLARVEEISIVQGFTLVFLEDLPGL 718
H +SS + + L T +EEISIV+ + VF +DLPG+
Sbjct: 719 -HALSSESLRSRLNQIT----------------LEEISIVREYPDVFPDDLPGM 755
Score = 26.2 bits (56), Expect(2) = 2e-07
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 1211 ILFDSNATYSFIAASVV*HLPLHTEIFRK 1125
+LFDS AT+SF++ S V + + E R+
Sbjct: 614 VLFDSGATHSFLSMSFVGNHGMEVEDLRR 642
>emb|CAN62233.1| hypothetical protein VITISV_010121 [Vitis vinifera]
Length = 1797
Score = 63.5 bits (153), Expect = 2e-07
Identities = 40/115 (34%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Frame = -3
Query: 1038 LLADLLVMNLEDYDIILGLDWLVLYNAQIDCRKKKGNLSLPSGQTLTI*GT*QNH----- 874
+L DL++++L+D+D+ILG+DWL Y+A IDC +K+ S+P + G +
Sbjct: 155 MLVDLVLLDLQDFDVILGMDWLTSYHASIDCFEKRVTFSIPGQPKFSFEGKHVDRPLRMI 214
Query: 873 ---QVSSYNPKGILVWTTKI*VRNLFSLL*TLARVEEISIVQGFTLVFLEDLPGL 718
+ SS KG + + + N L ++E+I IV+ + VFLEDLPGL
Sbjct: 215 SALRASSLLKKGCQGFLASV-MSNESDL-----KLEDIPIVREYPDVFLEDLPGL 263
>emb|CAE02081.2| OSJNBa0074B10.9 [Oryza sativa Japonica Group]
Length = 1659
Score = 53.9 bits (128), Expect(3) = 2e-07
Identities = 33/119 (27%), Positives = 59/119 (49%)
Frame = -3
Query: 1074 CTFSELRIKDKVLLADLLVMNLEDYDIILGLDWLVLYNAQIDCRKKKGNLSLPSGQTLTI 895
C + + I++ + L+++ +D D+ILG+DWL + IDC +K ++ +G+T++
Sbjct: 624 CPSATIEIEEVPFPSSLILLESKDLDVILGMDWLSRHRGVIDCANRKVTITSSNGETISF 683
Query: 894 *GT*QNHQVSSYNPKGILVWTTKI*VRNLFSLL*TLARVEEISIVQGFTLVFLEDLPGL 718
Y+PK V ++ ++EI IVQ + VF EDLPG+
Sbjct: 684 ---------FVYSPKSHGVNLNQV-------------ALQEIPIVQDYPDVFPEDLPGM 720
Score = 24.6 bits (52), Expect(3) = 2e-07
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 730 PPRSTSIREFDFVIDLVTGTHPV 662
PP+ R+ +F IDLV GT+P+
Sbjct: 721 PPK----RDIEFRIDLVPGTNPI 739
Score = 23.9 bits (50), Expect(3) = 2e-07
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -1
Query: 1211 ILFDSNATYSFIAAS 1167
+LFDS AT+SF++ S
Sbjct: 579 VLFDSGATHSFLSKS 593
>gb|AAM14693.1|AC097446_22 Putative polyprotein [Oryza sativa Japonica Group]
gi|110288622|gb|ABB46770.2| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1630
Score = 53.9 bits (128), Expect(3) = 2e-07
Identities = 34/119 (28%), Positives = 58/119 (48%)
Frame = -3
Query: 1074 CTFSELRIKDKVLLADLLVMNLEDYDIILGLDWLVLYNAQIDCRKKKGNLSLPSGQTLTI 895
C + I++ + L+++ +D D+ILG+DWL + IDC +K L+ +G+T++
Sbjct: 655 CPSVTIEIEEVPFPSSLILLESKDLDVILGMDWLSRHRGVIDCANRKVTLTSSNGETVSF 714
Query: 894 *GT*QNHQVSSYNPKGILVWTTKI*VRNLFSLL*TLARVEEISIVQGFTLVFLEDLPGL 718
VSS G+++ ++EI IVQ + VF EDLPG+
Sbjct: 715 -------FVSSPKSHGVIL---------------NQVALQEIPIVQDYPDVFPEDLPGM 751
Score = 24.6 bits (52), Expect(3) = 2e-07
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 730 PPRSTSIREFDFVIDLVTGTHPV 662
PP+ R+ +F IDLV GT+P+
Sbjct: 752 PPK----RDIEFRIDLVPGTNPI 770
Score = 23.9 bits (50), Expect(3) = 2e-07
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -1
Query: 1211 ILFDSNATYSFIAAS 1167
+LFDS AT+SF++ S
Sbjct: 610 VLFDSGATHSFLSKS 624
>emb|CAH66018.1| OSIGBa0105N24.2 [Oryza sativa Indica Group]
Length = 1608
Score = 52.4 bits (124), Expect(3) = 2e-07
Identities = 33/119 (27%), Positives = 58/119 (48%)
Frame = -3
Query: 1074 CTFSELRIKDKVLLADLLVMNLEDYDIILGLDWLVLYNAQIDCRKKKGNLSLPSGQTLTI 895
C + + I++ + L+++ +D D+ILG+DWL + IDC +K L+ +G+T++
Sbjct: 599 CPSATIEIEEVPFPSSLILLESKDRDVILGMDWLSRHRGVIDCANRKVTLTNSNGETVSF 658
Query: 894 *GT*QNHQVSSYNPKGILVWTTKI*VRNLFSLL*TLARVEEISIVQGFTLVFLEDLPGL 718
SS G+++ ++EI IVQ + VF EDLPG+
Sbjct: 659 -------FASSPKSHGVIL---------------NQVDLQEIPIVQDYPDVFPEDLPGM 695
Score = 26.2 bits (56), Expect(3) = 2e-07
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2
Query: 730 PPRSTSIREFDFVIDLVTGTHPV 662
PP+ R+ DF IDLV GT+P+
Sbjct: 696 PPK----RDIDFRIDLVPGTNPI 714
Score = 23.9 bits (50), Expect(3) = 2e-07
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -1
Query: 1211 ILFDSNATYSFIAAS 1167
+LFDS AT+SF++ S
Sbjct: 554 VLFDSGATHSFLSKS 568