BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00031964
         (478 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB84820.1| hypothetical protein L484_003853 [Morus notabilis]      65   1e-08
ref|XP_002273255.1| PREDICTED: pentatricopeptide repeat-containi...    65   1e-08
ref|XP_006428907.1| hypothetical protein CICLE_v10011055mg [Citr...    63   5e-08
ref|XP_004305248.1| PREDICTED: pentatricopeptide repeat-containi...    62   6e-08
ref|XP_007027210.1| Tetratricopeptide repeat (TPR)-like superfam...    61   2e-07
ref|XP_002525196.1| pentatricopeptide repeat-containing protein,...    58   2e-06
ref|XP_007208081.1| hypothetical protein PRUPE_ppa001520mg [Prun...    57   4e-06

>gb|EXB84820.1| hypothetical protein L484_003853 [Morus notabilis]
          Length = 822

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 40/85 (47%), Positives = 55/85 (64%)
 Frame = +2

Query: 23  EVKDALVKLLQDVLGLTVVSTGPKIPFIQNDPRSRRDSVLKHKNLEQNEFHSDDDDSSAR 202
           EVKDA+ KLL+D LGL V+STG KI     +P  + DS     +L  ++F S +   S R
Sbjct: 741 EVKDAITKLLKDELGLEVLSTGLKI-----EPNRQVDS----DSLGSSDF-SGEMKYSTR 790

Query: 203 RPTILQRLKVTRISLNRWLQKRIGI 277
           RP ++QRLKVT+ SL  WLQ++I +
Sbjct: 791 RPVVIQRLKVTKESLQHWLQRKISL 815


>ref|XP_002273255.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
            chloroplastic [Vitis vinifera]
            gi|297741486|emb|CBI32618.3| unnamed protein product
            [Vitis vinifera]
          Length = 842

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 42/92 (45%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
 Frame = +2

Query: 20   SEVKDALVKLLQDVLGLTVVSTGPKIPF-----IQNDPRSRRDSVLKHKNLEQNEFHSDD 184
            S VK A++KLLQD LGL V   GPKI       +   P S  D     + L +N   ++ 
Sbjct: 753  SPVKGAIIKLLQDELGLEVAFAGPKIALDKRINLGGPPGSDPDW---QEALGRNRLPTEL 809

Query: 185  DDSSARRPTILQRLKVTRISLNRWLQKRIGIT 280
            + SS RRP +LQR KVTR SL+ WLQ+R+G T
Sbjct: 810  E-SSTRRPAVLQRFKVTRKSLDHWLQRRVGAT 840


>ref|XP_006428907.1| hypothetical protein CICLE_v10011055mg [Citrus clementina]
            gi|568853887|ref|XP_006480569.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g02830,
            chloroplastic-like [Citrus sinensis]
            gi|557530964|gb|ESR42147.1| hypothetical protein
            CICLE_v10011055mg [Citrus clementina]
          Length = 850

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 40/96 (41%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
 Frame = +2

Query: 23   EVKDALVKLLQDVLGLTVVSTGPKIPFIQNDPRSRRDSVLKHKNLEQNEFHSDDDD---- 190
            EVKDA+ KLLQD LGL V   GP I               +HKN    +    + +    
Sbjct: 768  EVKDAITKLLQDDLGLKVFLDGPSI---------------QHKNAHMQKLLDSESNMAKT 812

Query: 191  ------SSARRPTILQRLKVTRISLNRWLQKRIGIT 280
                  SS RRP ILQRLKV + SL+ WLQ+R+G T
Sbjct: 813  LHIELKSSTRRPKILQRLKVPKKSLHHWLQRRVGST 848


>ref|XP_004305248.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 847

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 36/85 (42%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
 Frame = +2

Query: 23   EVKDALVKLLQDVLGLTVVSTGPKIPFIQNDPRSRRDSVLKHKNLEQNEFHSDDDDS--- 193
            EVKDA+ KLLQD LGL V+ST PK+    +     ++++   +NL++     +       
Sbjct: 760  EVKDAITKLLQDELGLKVLSTVPKVAL--DTTIVSQNTIDSDQNLDEKPLRKELQPELIY 817

Query: 194  SARRPTILQRLKVTRISLNRWLQKR 268
            S RRP +L+RLKV+R SL +WL+KR
Sbjct: 818  STRRPVVLERLKVSRKSLQQWLRKR 842


>ref|XP_007027210.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
            [Theobroma cacao] gi|508715815|gb|EOY07712.1|
            Tetratricopeptide repeat (TPR)-like superfamily protein,
            putative [Theobroma cacao]
          Length = 858

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 42/92 (45%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
 Frame = +2

Query: 8    ADDGSEVKDALVKLLQDVLGLTVVSTGPKIP--FIQNDPRSRRDSVLKHKNLEQNEFHSD 181
            A   SEVKDA++KLLQD LGL V+   P++    +        D VL  + + +N   S 
Sbjct: 766  AKQKSEVKDAVMKLLQDELGLEVLLVEPQVKNGLVDLQTPIDADPVLL-ETVGKNSL-SS 823

Query: 182  DDDSSARRPTILQRLKVTRISLNRWLQKRIGI 277
               SS RRP ILQRLKVTR SLN WL +R  +
Sbjct: 824  KPLSSTRRPVILQRLKVTRKSLNHWLWRRADV 855


>ref|XP_002525196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535493|gb|EEF37162.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 786

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
 Frame = +2

Query: 8   ADDGSEVKDALVKLLQDVLGLTVVSTGPKIPF-IQNDPRSRRDSVLKHKNLEQNEFHSDD 184
           A   +EVKDA+ KLL + LGL V+   P+    ++ D     +S   ++N  ++    + 
Sbjct: 696 ATQKAEVKDAIFKLLHNELGLEVLIVVPRYTADLETDLEIPLNS---YQNWSKSSGRENI 752

Query: 185 DDSSARRPTILQRLKVTRISLNRWLQKRIG 274
             SSARRP +LQRLKVTR SL+ WLQ++ G
Sbjct: 753 RVSSARRPLVLQRLKVTRNSLHSWLQRKAG 782


>ref|XP_007208081.1| hypothetical protein PRUPE_ppa001520mg [Prunus persica]
           gi|462403723|gb|EMJ09280.1| hypothetical protein
           PRUPE_ppa001520mg [Prunus persica]
          Length = 809

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 39/104 (37%), Positives = 52/104 (50%), Gaps = 15/104 (14%)
 Frame = +2

Query: 2   GVADDGS-----EVKDALVKLLQDVLGLTVVSTGPKIPFIQNDPRSRRDSVLKHKNLEQN 166
           G  D GS     EVKDA+ KLLQD LGL V++ G K+           D+ ++  N   +
Sbjct: 710 GEVDGGSTTQNLEVKDAITKLLQDELGLKVLAAGAKVGL---------DTTIERGNTTDS 760

Query: 167 EFHSDDDDS----------SARRPTILQRLKVTRISLNRWLQKR 268
           +   D+             S RRP  L+RLKVTR SL  WL++R
Sbjct: 761 DQDLDEMSGRDELPAELIYSTRRPVALERLKVTRGSLQHWLRRR 804