BLASTX nr result
ID: Cocculus23_contig00031892
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00031892
(771 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004293118.1| PREDICTED: pentatricopeptide repeat-containi... 296 7e-78
gb|EXC37761.1| hypothetical protein L484_001219 [Morus notabilis] 286 4e-75
ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containi... 286 6e-75
ref|XP_006481538.1| PREDICTED: pentatricopeptide repeat-containi... 283 4e-74
ref|XP_006424118.1| hypothetical protein CICLE_v10028449mg [Citr... 283 4e-74
ref|XP_002299777.1| pentatricopeptide repeat-containing family p... 280 4e-73
ref|XP_007015694.1| Tetratricopeptide repeat (TPR)-like superfam... 278 2e-72
ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containi... 276 4e-72
ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containi... 275 1e-71
ref|XP_004159118.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 273 4e-71
ref|XP_007150033.1| hypothetical protein PHAVU_005G120400g [Phas... 272 8e-71
ref|XP_004251424.1| PREDICTED: pentatricopeptide repeat-containi... 261 2e-67
ref|XP_004487456.1| PREDICTED: pentatricopeptide repeat-containi... 260 4e-67
ref|XP_006340426.1| PREDICTED: pentatricopeptide repeat-containi... 257 3e-66
gb|EYU20652.1| hypothetical protein MIMGU_mgv1a0263781mg, partia... 253 7e-65
ref|XP_003596872.1| Pentatricopeptide repeat-containing protein ... 248 2e-63
emb|CBI24422.3| unnamed protein product [Vitis vinifera] 244 2e-62
gb|AEP33751.1| chloroplast biogenesis 19, partial [Lepidium virg... 243 4e-62
gb|AEP33752.1| chloroplast biogenesis 19, partial [Lobularia mar... 243 5e-62
gb|AEP33754.1| chloroplast biogenesis 19, partial [Nasturtium of... 241 3e-61
>ref|XP_004293118.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 504
Score = 296 bits (757), Expect = 7e-78
Identities = 139/203 (68%), Positives = 168/203 (82%)
Frame = +3
Query: 3 YAEEALEHFYRMQVEGFKPDGVSFTGALTACSHAGFVEKGLHLYKTMKNAYKISPRIEHH 182
+AEEALE F++MQ EGFKPDGVSFTGALTACSHAG V++GLH + MK +KI+PRIEH+
Sbjct: 296 HAEEALEFFHQMQKEGFKPDGVSFTGALTACSHAGLVDEGLHFFDKMKRIHKITPRIEHY 355
Query: 183 GCMVDLFSRAGRLEDAFCVIKNMKMKPNEVVIGSLLAACRTHGDVTLAEKLTDYLVELDP 362
GC+VDL+SRAGRLEDA +I+NM MKPNEVV+GSLLAACRT G+V LAE+L YL +LDP
Sbjct: 356 GCIVDLYSRAGRLEDALSIIENMPMKPNEVVLGSLLAACRTSGNVNLAERLMKYLFKLDP 415
Query: 363 DSDFNHVLLSNTYAAAGRWDDVGKIRKRMKDLGIKKKPGFSSIEIDCNVHEFICGDKSHS 542
D N+VLL+N YAA GRWD K+RK MKDLGI+K PGFSS+EIDC++HEF+ GDKSH
Sbjct: 416 GVDSNYVLLANIYAADGRWDGASKVRKTMKDLGIQKTPGFSSVEIDCDIHEFVAGDKSHV 475
Query: 543 DSDHIYEMLNQLSIELSLYGYLP 611
D+++IY L LS EL L GY+P
Sbjct: 476 DAEYIYSTLELLSFELKLCGYVP 498
>gb|EXC37761.1| hypothetical protein L484_001219 [Morus notabilis]
Length = 508
Score = 286 bits (733), Expect = 4e-75
Identities = 140/203 (68%), Positives = 163/203 (80%)
Frame = +3
Query: 3 YAEEALEHFYRMQVEGFKPDGVSFTGALTACSHAGFVEKGLHLYKTMKNAYKISPRIEHH 182
+AEEAL+ F MQ EGFKPDGVSFTGALTACSHAG VE+GL L++ MK + I RIEH+
Sbjct: 298 HAEEALKFFNLMQREGFKPDGVSFTGALTACSHAGLVEEGLLLFENMKRVHGIRHRIEHY 357
Query: 183 GCMVDLFSRAGRLEDAFCVIKNMKMKPNEVVIGSLLAACRTHGDVTLAEKLTDYLVELDP 362
GC+VDL+SRAGRLEDA VI+ M MKPNEVV+GSLLAACRTHGD+TLAE+L YL +LDP
Sbjct: 358 GCIVDLYSRAGRLEDALNVIEYMPMKPNEVVLGSLLAACRTHGDITLAERLMKYLSDLDP 417
Query: 363 DSDFNHVLLSNTYAAAGRWDDVGKIRKRMKDLGIKKKPGFSSIEIDCNVHEFICGDKSHS 542
D N+VLL+N YAA G+WD GK+RK MK LGI+K PGFSSIEIDCN+HEF+ GDKSH
Sbjct: 418 GGDSNYVLLANMYAAVGKWDGAGKVRKTMKALGIQKTPGFSSIEIDCNIHEFVAGDKSHV 477
Query: 543 DSDHIYEMLNQLSIELSLYGYLP 611
D + IY ML LS EL GY+P
Sbjct: 478 DKNCIYSMLELLSSELKASGYVP 500
>ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Vitis vinifera]
Length = 518
Score = 286 bits (732), Expect = 6e-75
Identities = 137/204 (67%), Positives = 166/204 (81%)
Frame = +3
Query: 3 YAEEALEHFYRMQVEGFKPDGVSFTGALTACSHAGFVEKGLHLYKTMKNAYKISPRIEHH 182
+AEEALE F M+ EGF+PDGVSFTGALTACSH+G V++GL + MK KISPRIEH+
Sbjct: 305 HAEEALEFFNLMRKEGFRPDGVSFTGALTACSHSGLVDEGLQFFDIMKRTRKISPRIEHY 364
Query: 183 GCMVDLFSRAGRLEDAFCVIKNMKMKPNEVVIGSLLAACRTHGDVTLAEKLTDYLVELDP 362
GC+VDL+SRAGRLEDA VI NM MKPNEVV+GSLLAACRTHGDV LAE+L YL E+DP
Sbjct: 365 GCLVDLYSRAGRLEDALNVIANMPMKPNEVVLGSLLAACRTHGDVGLAERLMKYLCEVDP 424
Query: 363 DSDFNHVLLSNTYAAAGRWDDVGKIRKRMKDLGIKKKPGFSSIEIDCNVHEFICGDKSHS 542
SD N+VLLSN YAA GRWD K+RK+MK LGI KKPGFSSIE+D ++HEF+ GDK+H
Sbjct: 425 GSDSNYVLLSNIYAAVGRWDGASKVRKKMKALGIHKKPGFSSIEMDGSIHEFVAGDKTHV 484
Query: 543 DSDHIYEMLNQLSIELSLYGYLPQ 614
++ +IY ML+ L +EL + GY+P+
Sbjct: 485 ETQNIYAMLDHLFLELRICGYVPE 508
>ref|XP_006481538.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Citrus sinensis]
Length = 509
Score = 283 bits (725), Expect = 4e-74
Identities = 134/205 (65%), Positives = 163/205 (79%)
Frame = +3
Query: 3 YAEEALEHFYRMQVEGFKPDGVSFTGALTACSHAGFVEKGLHLYKTMKNAYKISPRIEHH 182
+ EALE+F MQ EGFKPDGVSFTGALTACSHAG +E GL + MK Y++SPRIEH+
Sbjct: 296 FVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY 355
Query: 183 GCMVDLFSRAGRLEDAFCVIKNMKMKPNEVVIGSLLAACRTHGDVTLAEKLTDYLVELDP 362
GC+VDL+SRAGRLEDA V++NM MKPNEVV+GSLLAACRT GD+ LAE+L YLV+LDP
Sbjct: 356 GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDP 415
Query: 363 DSDFNHVLLSNTYAAAGRWDDVGKIRKRMKDLGIKKKPGFSSIEIDCNVHEFICGDKSHS 542
D N+VLL+N YAA G+WD GKIR+ MK GI+KKPG SSIEI +HEF+ GD+SH
Sbjct: 416 GVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHI 475
Query: 543 DSDHIYEMLNQLSIELSLYGYLPQS 617
+S+HIY ML LS +L L GY+P++
Sbjct: 476 ESEHIYSMLELLSFDLKLCGYVPET 500
>ref|XP_006424118.1| hypothetical protein CICLE_v10028449mg [Citrus clementina]
gi|557526052|gb|ESR37358.1| hypothetical protein
CICLE_v10028449mg [Citrus clementina]
Length = 445
Score = 283 bits (725), Expect = 4e-74
Identities = 134/205 (65%), Positives = 163/205 (79%)
Frame = +3
Query: 3 YAEEALEHFYRMQVEGFKPDGVSFTGALTACSHAGFVEKGLHLYKTMKNAYKISPRIEHH 182
+ EALE+F MQ EGFKPDGVSFTGALTACSHAG +E GL + MK Y++SPRIEH+
Sbjct: 226 FVGEALEYFNSMQKEGFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHY 285
Query: 183 GCMVDLFSRAGRLEDAFCVIKNMKMKPNEVVIGSLLAACRTHGDVTLAEKLTDYLVELDP 362
GC+VDL+SRAGRLEDA V++NM MKPNEVV+GSLLAACRT GD+ LAE+L YLV+LDP
Sbjct: 286 GCIVDLYSRAGRLEDALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDP 345
Query: 363 DSDFNHVLLSNTYAAAGRWDDVGKIRKRMKDLGIKKKPGFSSIEIDCNVHEFICGDKSHS 542
D N+VLL+N YAA G+WD GKIR+ MK GI+KKPG SSIEI +HEF+ GD+SH
Sbjct: 346 GVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHI 405
Query: 543 DSDHIYEMLNQLSIELSLYGYLPQS 617
+S+HIY ML LS +L L GY+P++
Sbjct: 406 ESEHIYSMLELLSFDLKLCGYVPET 430
>ref|XP_002299777.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222847035|gb|EEE84582.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 439
Score = 280 bits (716), Expect = 4e-73
Identities = 134/205 (65%), Positives = 163/205 (79%)
Frame = +3
Query: 3 YAEEALEHFYRMQVEGFKPDGVSFTGALTACSHAGFVEKGLHLYKTMKNAYKISPRIEHH 182
+ EEALEHF MQ +GFKP+ VSFTGALTACSH G V++GL + M+ +KISPRIEH+
Sbjct: 226 FTEEALEHFDLMQKQGFKPNDVSFTGALTACSHTGLVDEGLKYFDIMERVHKISPRIEHY 285
Query: 183 GCMVDLFSRAGRLEDAFCVIKNMKMKPNEVVIGSLLAACRTHGDVTLAEKLTDYLVELDP 362
GC+VDL+SRAGRLEDA V++NM MKPNEVV+GSLLAACRT GDV LAE+L +YLV LDP
Sbjct: 286 GCIVDLYSRAGRLEDAMSVVQNMPMKPNEVVVGSLLAACRTRGDVELAERLMNYLVHLDP 345
Query: 363 DSDFNHVLLSNTYAAAGRWDDVGKIRKRMKDLGIKKKPGFSSIEIDCNVHEFICGDKSHS 542
+D N+VLLSN YAA GRWD K R MK LGI+KKPGFSSIEI C++HEF+ GDKSH
Sbjct: 346 GADSNYVLLSNIYAAVGRWDGACKQRMTMKALGIQKKPGFSSIEIGCDIHEFVAGDKSHD 405
Query: 543 DSDHIYEMLNQLSIELSLYGYLPQS 617
++ IY ML LS + +L GY+P++
Sbjct: 406 KAEDIYSMLELLSFDQALCGYVPEA 430
>ref|XP_007015694.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao] gi|508786057|gb|EOY33313.1| Tetratricopeptide
repeat (TPR)-like superfamily protein [Theobroma cacao]
Length = 509
Score = 278 bits (710), Expect = 2e-72
Identities = 134/204 (65%), Positives = 164/204 (80%)
Frame = +3
Query: 3 YAEEALEHFYRMQVEGFKPDGVSFTGALTACSHAGFVEKGLHLYKTMKNAYKISPRIEHH 182
+AEEAL++F MQ EGFKPDGVSFTGALTACSHAG V++GL + MK Y+ISPRIEH
Sbjct: 296 FAEEALKYFDSMQKEGFKPDGVSFTGALTACSHAGLVDEGLRYFGIMKRVYRISPRIEHF 355
Query: 183 GCMVDLFSRAGRLEDAFCVIKNMKMKPNEVVIGSLLAACRTHGDVTLAEKLTDYLVELDP 362
GC+VDL+SRAG+LE+A VI+NM MKPNEVV+GSLLAACR HGD++LAE++ LV LDP
Sbjct: 356 GCIVDLYSRAGKLEEALDVIENMPMKPNEVVLGSLLAACRNHGDISLAERIVKNLVALDP 415
Query: 363 DSDFNHVLLSNTYAAAGRWDDVGKIRKRMKDLGIKKKPGFSSIEIDCNVHEFICGDKSHS 542
SD N+VLL+N YAA GRW+ K+R+RMK LGI+KKPGFSSIEI VHEF+ GDKSH
Sbjct: 416 GSDSNYVLLANIYAAVGRWEGASKVRRRMKALGIQKKPGFSSIEISGCVHEFVAGDKSHL 475
Query: 543 DSDHIYEMLNQLSIELSLYGYLPQ 614
+++ IY+ML L +L L GY P+
Sbjct: 476 ETECIYKMLELLCFDLLLSGYAPE 499
>ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Cucumis sativus]
Length = 525
Score = 276 bits (707), Expect = 4e-72
Identities = 130/205 (63%), Positives = 163/205 (79%)
Frame = +3
Query: 3 YAEEALEHFYRMQVEGFKPDGVSFTGALTACSHAGFVEKGLHLYKTMKNAYKISPRIEHH 182
+A+E+LE FY MQ EGFKPDGVS+TGALTACSHAG V KGL L+ MK+ +KI+PRIEH+
Sbjct: 308 FADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKITPRIEHY 367
Query: 183 GCMVDLFSRAGRLEDAFCVIKNMKMKPNEVVIGSLLAACRTHGDVTLAEKLTDYLVELDP 362
GC+VDL+ RAGRLEDA +I+ M MKPNEVV+GSLLAACRTHGDV LAE+L +L +LDP
Sbjct: 368 GCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMKHLFKLDP 427
Query: 363 DSDFNHVLLSNTYAAAGRWDDVGKIRKRMKDLGIKKKPGFSSIEIDCNVHEFICGDKSHS 542
+ D +VLLSN YAA G+WD +R+ MK G++KKPG+SS+EID VHEF+ GD H+
Sbjct: 428 EGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFVAGDNYHA 487
Query: 543 DSDHIYEMLNQLSIELSLYGYLPQS 617
D+D+IY ML+ L EL + GY+P S
Sbjct: 488 DADNIYSMLDLLCHELKVCGYVPGS 512
>ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Glycine max]
Length = 521
Score = 275 bits (703), Expect = 1e-71
Identities = 128/202 (63%), Positives = 161/202 (79%)
Frame = +3
Query: 6 AEEALEHFYRMQVEGFKPDGVSFTGALTACSHAGFVEKGLHLYKTMKNAYKISPRIEHHG 185
A+EAL +F MQ EGFKPDGVS+TGAL ACSHAG + +GL +++ MK +I PRIEH+G
Sbjct: 309 ADEALSYFNSMQEEGFKPDGVSYTGALMACSHAGLIGEGLRIFEHMKRVRRILPRIEHYG 368
Query: 186 CMVDLFSRAGRLEDAFCVIKNMKMKPNEVVIGSLLAACRTHGDVTLAEKLTDYLVELDPD 365
C+VDL+SRAGRLE+A V+KNM MKPNEV++GSLLAACRT G++ LAE + +YL+ELD
Sbjct: 369 CLVDLYSRAGRLEEALNVLKNMPMKPNEVILGSLLAACRTQGNIGLAENVMNYLIELDSG 428
Query: 366 SDFNHVLLSNTYAAAGRWDDVGKIRKRMKDLGIKKKPGFSSIEIDCNVHEFICGDKSHSD 545
D N+VLLSN YAA G+WD K+R+RMK+ GI+KKPGFSSIEID ++H+F+ GDKSH +
Sbjct: 429 GDSNYVLLSNIYAAVGKWDGANKVRRRMKERGIQKKPGFSSIEIDSSIHKFVSGDKSHEE 488
Query: 546 SDHIYEMLNQLSIELSLYGYLP 611
DHIY L LS EL L GY+P
Sbjct: 489 KDHIYAALEFLSFELQLCGYIP 510
>ref|XP_004159118.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05750, chloroplastic-like [Cucumis sativus]
Length = 525
Score = 273 bits (699), Expect = 4e-71
Identities = 129/205 (62%), Positives = 162/205 (79%)
Frame = +3
Query: 3 YAEEALEHFYRMQVEGFKPDGVSFTGALTACSHAGFVEKGLHLYKTMKNAYKISPRIEHH 182
+A+E+LE F MQ EGFKPDGVS+TGALTACSHAG V KGL L+ MK+ +KI+PRIEH+
Sbjct: 308 FADESLEFFXAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKITPRIEHY 367
Query: 183 GCMVDLFSRAGRLEDAFCVIKNMKMKPNEVVIGSLLAACRTHGDVTLAEKLTDYLVELDP 362
GC+VDL+ RAGRLEDA +I+ M MKPNEVV+GSLLAACRTHGDV LAE+L +L +LDP
Sbjct: 368 GCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMKHLFKLDP 427
Query: 363 DSDFNHVLLSNTYAAAGRWDDVGKIRKRMKDLGIKKKPGFSSIEIDCNVHEFICGDKSHS 542
+ D +VLLSN YAA G+WD +R+ MK G++KKPG+SS+EID VHEF+ GD H+
Sbjct: 428 EGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFVAGDNYHA 487
Query: 543 DSDHIYEMLNQLSIELSLYGYLPQS 617
D+D+IY ML+ L EL + GY+P S
Sbjct: 488 DADNIYSMLDLLCHELKVCGYVPGS 512
>ref|XP_007150033.1| hypothetical protein PHAVU_005G120400g [Phaseolus vulgaris]
gi|561023297|gb|ESW22027.1| hypothetical protein
PHAVU_005G120400g [Phaseolus vulgaris]
Length = 514
Score = 272 bits (696), Expect = 8e-71
Identities = 126/203 (62%), Positives = 161/203 (79%)
Frame = +3
Query: 3 YAEEALEHFYRMQVEGFKPDGVSFTGALTACSHAGFVEKGLHLYKTMKNAYKISPRIEHH 182
+A+EAL +F MQ GFKPDGVS TGAL ACSHAG + KGL +++ MK +ISPRIEH+
Sbjct: 301 FADEALNYFNSMQEAGFKPDGVSHTGALMACSHAGLINKGLKIFENMKRVLRISPRIEHY 360
Query: 183 GCMVDLFSRAGRLEDAFCVIKNMKMKPNEVVIGSLLAACRTHGDVTLAEKLTDYLVELDP 362
GC+VDL+SRAGRLE+A+ V+KNM M+PNEVV+GSLLAACRT G++ LAE + +L+ELDP
Sbjct: 361 GCLVDLYSRAGRLEEAWNVLKNMPMRPNEVVLGSLLAACRTQGNIELAENVMKHLIELDP 420
Query: 363 DSDFNHVLLSNTYAAAGRWDDVGKIRKRMKDLGIKKKPGFSSIEIDCNVHEFICGDKSHS 542
D N+VLLSN YAA G+WD K+R+ MK+ GI+K PGFSSIEID ++H+F+ GDKSH
Sbjct: 421 GKDSNYVLLSNIYAAVGKWDGANKVRRIMKERGIQKIPGFSSIEIDSSIHKFVAGDKSHE 480
Query: 543 DSDHIYEMLNQLSIELSLYGYLP 611
++DH+Y L LS EL L GY+P
Sbjct: 481 ENDHVYAALELLSFELQLCGYVP 503
>ref|XP_004251424.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Solanum lycopersicum]
Length = 507
Score = 261 bits (667), Expect = 2e-67
Identities = 124/202 (61%), Positives = 157/202 (77%)
Frame = +3
Query: 3 YAEEALEHFYRMQVEGFKPDGVSFTGALTACSHAGFVEKGLHLYKTMKNAYKISPRIEHH 182
+A +AL++F MQ EGF+PDGV+FTG LTACSHAG VEKGL +K MK ++I+PRIEH+
Sbjct: 295 HAIDALQYFDLMQNEGFQPDGVTFTGVLTACSHAGLVEKGLKYFKAMKRVHRITPRIEHY 354
Query: 183 GCMVDLFSRAGRLEDAFCVIKNMKMKPNEVVIGSLLAACRTHGDVTLAEKLTDYLVELDP 362
GC+VDL+SRAGRLEDA +IK M +KPNEV++GS+LAACR H DV LAE+L Y+ ELDP
Sbjct: 355 GCIVDLYSRAGRLEDALGIIKKMPVKPNEVILGSILAACRNHSDVRLAERLMHYIYELDP 414
Query: 363 DSDFNHVLLSNTYAAAGRWDDVGKIRKRMKDLGIKKKPGFSSIEIDCNVHEFICGDKSHS 542
D D NHVLLSN YAA G W +RK+MK LGI+K+PG SSIEID ++EF+ GD+SH
Sbjct: 415 DGDSNHVLLSNIYAAVGSWRGASTVRKKMKALGIQKRPGTSSIEIDGVLNEFVAGDRSHL 474
Query: 543 DSDHIYEMLNQLSIELSLYGYL 608
++ +Y ML LS EL + GY+
Sbjct: 475 HAEQVYAMLEHLSGELKVSGYV 496
>ref|XP_004487456.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Cicer arietinum]
Length = 512
Score = 260 bits (664), Expect = 4e-67
Identities = 123/203 (60%), Positives = 158/203 (77%)
Frame = +3
Query: 3 YAEEALEHFYRMQVEGFKPDGVSFTGALTACSHAGFVEKGLHLYKTMKNAYKISPRIEHH 182
+A+EAL FY M+ EGF+PDGVS+TGALTACSHAG +++GL ++ MK + PRIEH+
Sbjct: 299 HADEALSFFYSMKKEGFEPDGVSYTGALTACSHAGLIDEGLKIFANMKKVSRNLPRIEHY 358
Query: 183 GCMVDLFSRAGRLEDAFCVIKNMKMKPNEVVIGSLLAACRTHGDVTLAEKLTDYLVELDP 362
GC+VDL+SRAGR+++A+ VIK M MKPNEVV+GSLLAACRT GDV LAEK+ YLVEL P
Sbjct: 359 GCLVDLYSRAGRVKEAWHVIKKMPMKPNEVVLGSLLAACRTQGDVKLAEKVMKYLVELYP 418
Query: 363 DSDFNHVLLSNTYAAAGRWDDVGKIRKRMKDLGIKKKPGFSSIEIDCNVHEFICGDKSHS 542
+ D N+VLLSN YAA G+WD K+R MK+ G++KK FSSIEID ++H+F+ GDK H
Sbjct: 419 EGDSNYVLLSNIYAAVGKWDGASKVRMAMKERGLQKKLAFSSIEIDSSIHKFVSGDKYHE 478
Query: 543 DSDHIYEMLNQLSIELSLYGYLP 611
+++ IY L LS EL L GY+P
Sbjct: 479 ENNSIYSALELLSFELKLCGYVP 501
>ref|XP_006340426.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Solanum tuberosum]
Length = 509
Score = 257 bits (657), Expect = 3e-66
Identities = 122/202 (60%), Positives = 156/202 (77%)
Frame = +3
Query: 3 YAEEALEHFYRMQVEGFKPDGVSFTGALTACSHAGFVEKGLHLYKTMKNAYKISPRIEHH 182
+A +AL++F MQ EGF PD V+FTG LTACSHAG VEKGL +K+MK ++I+PRIEH+
Sbjct: 297 HAVDALQYFELMQNEGFLPDAVTFTGVLTACSHAGLVEKGLKYFKSMKRVHRITPRIEHY 356
Query: 183 GCMVDLFSRAGRLEDAFCVIKNMKMKPNEVVIGSLLAACRTHGDVTLAEKLTDYLVELDP 362
GC+VDL+SRAGRLEDA +IKNM MKPNEV++GS+LAACR DV LAE+L Y+ +LDP
Sbjct: 357 GCIVDLYSRAGRLEDALGIIKNMPMKPNEVILGSILAACRNLSDVKLAERLMHYIYKLDP 416
Query: 363 DSDFNHVLLSNTYAAAGRWDDVGKIRKRMKDLGIKKKPGFSSIEIDCNVHEFICGDKSHS 542
D D NHVLLSN YAA G W +RK+MK LGI+K+PG SSIE+D ++EF+ GD+SH
Sbjct: 417 DGDSNHVLLSNIYAAVGSWRGASTVRKKMKALGIQKRPGISSIEVDGVLNEFVAGDRSHV 476
Query: 543 DSDHIYEMLNQLSIELSLYGYL 608
++ +Y ML LS EL + GY+
Sbjct: 477 HAEQVYAMLEHLSGELKVSGYV 498
>gb|EYU20652.1| hypothetical protein MIMGU_mgv1a0263781mg, partial [Mimulus
guttatus]
Length = 216
Score = 253 bits (645), Expect = 7e-65
Identities = 119/193 (61%), Positives = 152/193 (78%)
Frame = +3
Query: 27 FYRMQVEGFKPDGVSFTGALTACSHAGFVEKGLHLYKTMKNAYKISPRIEHHGCMVDLFS 206
F+ MQ +GF PD VSFTGALTACSHAG V++G+ L+KTM+ ++I+PRIEH+GC+VDL+S
Sbjct: 14 FHSMQKDGFDPDSVSFTGALTACSHAGLVDEGIKLFKTMRKVHRITPRIEHYGCIVDLYS 73
Query: 207 RAGRLEDAFCVIKNMKMKPNEVVIGSLLAACRTHGDVTLAEKLTDYLVELDPDSDFNHVL 386
RAGRL++A V+KNM MKPNEVV+GSLLAACR DV LAE+L Y+ +LDP DFN+VL
Sbjct: 74 RAGRLKEALVVVKNMPMKPNEVVVGSLLAACRNFDDVGLAERLMKYIYDLDPSGDFNYVL 133
Query: 387 LSNTYAAAGRWDDVGKIRKRMKDLGIKKKPGFSSIEIDCNVHEFICGDKSHSDSDHIYEM 566
LSN YAA G W +RK MKD G++KKPG SSIE++ ++ F GDKSH+D++ IYEM
Sbjct: 134 LSNIYAAKGSWRGASNVRKTMKDRGVQKKPGISSIEVNGILNRFGAGDKSHADAESIYEM 193
Query: 567 LNQLSIELSLYGY 605
L LS EL++ GY
Sbjct: 194 LEYLSEELTVCGY 206
>ref|XP_003596872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240903|gb|ABD32761.1| Tetratricopeptide-like
helical [Medicago truncatula]
gi|355485920|gb|AES67123.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 517
Score = 248 bits (633), Expect = 2e-63
Identities = 117/202 (57%), Positives = 153/202 (75%)
Frame = +3
Query: 6 AEEALEHFYRMQVEGFKPDGVSFTGALTACSHAGFVEKGLHLYKTMKNAYKISPRIEHHG 185
A++AL F M+ EG +P+GVS+T ALTACSHAG +++GL ++ +K ++ SPRIEH+G
Sbjct: 305 ADKALSFFRSMKKEGLEPNGVSYTSALTACSHAGLIDEGLKIFADIKRDHRNSPRIEHYG 364
Query: 186 CMVDLFSRAGRLEDAFCVIKNMKMKPNEVVIGSLLAACRTHGDVTLAEKLTDYLVELDPD 365
C+VDL+SRAGRL++A+ VIK M M PNEVV+GSLLAACRT GDV LAEK+ Y VEL P
Sbjct: 365 CLVDLYSRAGRLKEAWDVIKKMPMMPNEVVLGSLLAACRTQGDVELAEKVMKYQVELYPG 424
Query: 366 SDFNHVLLSNTYAAAGRWDDVGKIRKRMKDLGIKKKPGFSSIEIDCNVHEFICGDKSHSD 545
D N+VL SN YAA G+WD K+R+ MK+ G++K FSSIEID +H+F+ GDK H +
Sbjct: 425 GDSNYVLFSNIYAAVGKWDGASKVRREMKERGLQKNLAFSSIEIDSGIHKFVSGDKYHEE 484
Query: 546 SDHIYEMLNQLSIELSLYGYLP 611
+D+IY L LS EL LYGY+P
Sbjct: 485 NDYIYSALELLSFELHLYGYVP 506
>emb|CBI24422.3| unnamed protein product [Vitis vinifera]
Length = 502
Score = 244 bits (623), Expect = 2e-62
Identities = 122/204 (59%), Positives = 150/204 (73%)
Frame = +3
Query: 3 YAEEALEHFYRMQVEGFKPDGVSFTGALTACSHAGFVEKGLHLYKTMKNAYKISPRIEHH 182
+AEEALE F M+ EG H+G V++GL + MK KISPRIEH+
Sbjct: 305 HAEEALEFFNLMRKEG----------------HSGLVDEGLQFFDIMKRTRKISPRIEHY 348
Query: 183 GCMVDLFSRAGRLEDAFCVIKNMKMKPNEVVIGSLLAACRTHGDVTLAEKLTDYLVELDP 362
GC+VDL+SRAGRLEDA VI NM MKPNEVV+GSLLAACRTHGDV LAE+L YL E+DP
Sbjct: 349 GCLVDLYSRAGRLEDALNVIANMPMKPNEVVLGSLLAACRTHGDVGLAERLMKYLCEVDP 408
Query: 363 DSDFNHVLLSNTYAAAGRWDDVGKIRKRMKDLGIKKKPGFSSIEIDCNVHEFICGDKSHS 542
SD N+VLLSN YAA GRWD K+RK+MK LGI KKPGFSSIE+D ++HEF+ GDK+H
Sbjct: 409 GSDSNYVLLSNIYAAVGRWDGASKVRKKMKALGIHKKPGFSSIEMDGSIHEFVAGDKTHV 468
Query: 543 DSDHIYEMLNQLSIELSLYGYLPQ 614
++ +IY ML+ L +EL + GY+P+
Sbjct: 469 ETQNIYAMLDHLFLELRICGYVPE 492
>gb|AEP33751.1| chloroplast biogenesis 19, partial [Lepidium virginicum]
Length = 485
Score = 243 bits (621), Expect = 4e-62
Identities = 118/198 (59%), Positives = 155/198 (78%), Gaps = 1/198 (0%)
Frame = +3
Query: 6 AEEALEHFYRMQVEGFKPDGVSFTGALTACSHAGFVEKGLHLYKTMKNAYKISPRIEHHG 185
A E+L +F +MQ EGF PDGV+FTGALTACSH G VE+G ++ MK+ Y+ISPRIEH+G
Sbjct: 273 ANESLVYFRKMQREGFTPDGVTFTGALTACSHVGLVEEGFQYFQMMKHDYRISPRIEHYG 332
Query: 186 CMVDLFSRAGRLEDAFCVIKNMKMKPNEVVIGSLLAACRTHGDVT-LAEKLTDYLVELDP 362
C+VDL+SRAGRLEDAF V+++M MKPNEVVIGSLLAACR HG+ T LAE+L Y+ +LD
Sbjct: 333 CLVDLYSRAGRLEDAFIVVESMPMKPNEVVIGSLLAACRNHGNHTILAERLMKYITDLDV 392
Query: 363 DSDFNHVLLSNTYAAAGRWDDVGKIRKRMKDLGIKKKPGFSSIEIDCNVHEFICGDKSHS 542
S N+V+LSN YAA G+W+ K+R++MK LG+KK+PG+SSIEID H F+ GD +H
Sbjct: 393 KSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGYSSIEIDDCTHVFMAGDSAHV 452
Query: 543 DSDHIYEMLNQLSIELSL 596
++ +I E+L +S +L L
Sbjct: 453 ETAYIREVLELISSDLRL 470
>gb|AEP33752.1| chloroplast biogenesis 19, partial [Lobularia maritima]
Length = 496
Score = 243 bits (620), Expect = 5e-62
Identities = 119/206 (57%), Positives = 160/206 (77%), Gaps = 1/206 (0%)
Frame = +3
Query: 3 YAEEALEHFYRMQVEGFKPDGVSFTGALTACSHAGFVEKGLHLYKTMKNAYKISPRIEHH 182
+A+E+L +F RMQ EGFKP+ V+FTGALTACSH G VE+GL ++TMK Y+ISPRIEH+
Sbjct: 283 HADESLVYFRRMQEEGFKPNAVTFTGALTACSHVGLVEEGLRYFQTMKKEYRISPRIEHY 342
Query: 183 GCMVDLFSRAGRLEDAFCVIKNMKMKPNEVVIGSLLAACRTHGDVT-LAEKLTDYLVELD 359
GC+VDL+SRAGRLEDA V+++M MKPNEVVIGSLLAACRTHG+ T LAE+L +L + +
Sbjct: 343 GCLVDLYSRAGRLEDALNVVQSMPMKPNEVVIGSLLAACRTHGNNTVLAERLMKHLSDTN 402
Query: 360 PDSDFNHVLLSNTYAAAGRWDDVGKIRKRMKDLGIKKKPGFSSIEIDCNVHEFICGDKSH 539
S N+V+LSN YAA G+W+ K+R++MK LG+KK+PGFSSIEID H F+ GD +H
Sbjct: 403 VKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCTHVFMAGDSAH 462
Query: 540 SDSDHIYEMLNQLSIELSLYGYLPQS 617
++ +I E+L LS ++ G + ++
Sbjct: 463 VETGYIREVLEILSSDMQSQGCVDET 488
>gb|AEP33754.1| chloroplast biogenesis 19, partial [Nasturtium officinale]
Length = 447
Score = 241 bits (614), Expect = 3e-61
Identities = 119/200 (59%), Positives = 156/200 (78%), Gaps = 1/200 (0%)
Frame = +3
Query: 6 AEEALEHFYRMQVEGFKPDGVSFTGALTACSHAGFVEKGLHLYKTMKNAYKISPRIEHHG 185
A E+L +F +MQ EGFKPD V+FTGALTACSH G VE+GL ++TMK Y+ISPRIEH+G
Sbjct: 235 AHESLFYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDYRISPRIEHYG 294
Query: 186 CMVDLFSRAGRLEDAFCVIKNMKMKPNEVVIGSLLAACRTHGDVT-LAEKLTDYLVELDP 362
C+VDL+SRAGRLEDA V+++M MKPNEVVIGSLLAAC+ HG+ T LAE+L +L +L+
Sbjct: 295 CIVDLYSRAGRLEDALKVVQSMPMKPNEVVIGSLLAACKNHGNNTLLAERLMKHLSDLNV 354
Query: 363 DSDFNHVLLSNTYAAAGRWDDVGKIRKRMKDLGIKKKPGFSSIEIDCNVHEFICGDKSHS 542
S N+V+LSN YAA G+W+ K+R++MK LG+KK+PGFSSIEID H F+ GD +H
Sbjct: 355 KSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDECTHVFMAGDSAHV 414
Query: 543 DSDHIYEMLNQLSIELSLYG 602
++ +I E+L +S +L L G
Sbjct: 415 ETANIREILGLMSSDLRLQG 434