BLASTX nr result
ID: Cocculus23_contig00031792
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00031792
(226 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004304947.1| PREDICTED: pentatricopeptide repeat-containi... 84 2e-14
ref|XP_002517451.1| pentatricopeptide repeat-containing protein,... 84 2e-14
ref|XP_007216409.1| hypothetical protein PRUPE_ppa022709mg, part... 84 3e-14
ref|XP_006338488.1| PREDICTED: putative pentatricopeptide repeat... 80 4e-13
ref|XP_004233685.1| PREDICTED: putative pentatricopeptide repeat... 80 4e-13
emb|CBI35029.3| unnamed protein product [Vitis vinifera] 78 1e-12
ref|XP_002276684.1| PREDICTED: putative pentatricopeptide repeat... 78 1e-12
ref|XP_007032423.1| Tetratricopeptide repeat (TPR)-like superfam... 76 4e-12
ref|NP_001168258.1| hypothetical protein [Zea mays] gi|223947079... 74 2e-11
ref|XP_006395353.1| hypothetical protein EUTSA_v10005682mg [Eutr... 74 3e-11
ref|XP_006650550.1| PREDICTED: pentatricopeptide repeat-containi... 72 6e-11
ref|XP_003559455.1| PREDICTED: putative pentatricopeptide repeat... 72 6e-11
gb|EMS68422.1| hypothetical protein TRIUR3_23855 [Triticum urartu] 72 8e-11
gb|EMT01880.1| hypothetical protein F775_14784 [Aegilops tauschii] 72 1e-10
ref|XP_002877120.1| pentatricopeptide repeat-containing protein ... 72 1e-10
ref|XP_002439151.1| hypothetical protein SORBIDRAFT_09g001360 [S... 72 1e-10
gb|EEC76135.1| hypothetical protein OsI_13421 [Oryza sativa Indi... 70 2e-10
gb|EAY88621.1| hypothetical protein OsI_10098 [Oryza sativa Indi... 70 2e-10
ref|NP_001173276.1| Os03g0158900 [Oryza sativa Japonica Group] g... 70 2e-10
gb|EXB36666.1| hypothetical protein L484_002079 [Morus notabilis] 70 3e-10
>ref|XP_004304947.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g28660-like [Fragaria vesca subsp. vesca]
Length = 501
Score = 84.3 bits (207), Expect = 2e-14
Identities = 43/74 (58%), Positives = 50/74 (67%)
Frame = +3
Query: 3 LASVWGALLTACRIHSNXXXXXXXXXXXXXXXHGNGSEEDGAYVQLSNIYLSANRGEDAR 182
LASVWGALL+ CRIH+N + + EE GAYVQLSNIYL A R EDA
Sbjct: 385 LASVWGALLSGCRIHNNVDLAEIAVEQLLQVANDDRGEEVGAYVQLSNIYLGAQRSEDAL 444
Query: 183 RIRKMMGQRGIKKT 224
RIRKM+G++GIKKT
Sbjct: 445 RIRKMIGEKGIKKT 458
>ref|XP_002517451.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543462|gb|EEF44993.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 428
Score = 84.0 bits (206), Expect = 2e-14
Identities = 39/74 (52%), Positives = 51/74 (68%)
Frame = +3
Query: 3 LASVWGALLTACRIHSNXXXXXXXXXXXXXXXHGNGSEEDGAYVQLSNIYLSANRGEDAR 182
LASVWGA+L++CR H N +GNG+EED A+VQL NIYLS RGEDA
Sbjct: 299 LASVWGAVLSSCRTHKNAELAEFAVQELLQLENGNGNEEDAAFVQLWNIYLSTGRGEDAS 358
Query: 183 RIRKMMGQRGIKKT 224
+I +++G+RG+KKT
Sbjct: 359 KIHRLIGERGLKKT 372
>ref|XP_007216409.1| hypothetical protein PRUPE_ppa022709mg, partial [Prunus persica]
gi|462412559|gb|EMJ17608.1| hypothetical protein
PRUPE_ppa022709mg, partial [Prunus persica]
Length = 541
Score = 83.6 bits (205), Expect = 3e-14
Identities = 44/74 (59%), Positives = 49/74 (66%)
Frame = +3
Query: 3 LASVWGALLTACRIHSNXXXXXXXXXXXXXXXHGNGSEEDGAYVQLSNIYLSANRGEDAR 182
LASVWGALL+ CRIH+N + EE GAYVQLSNIYL A RGEDA
Sbjct: 370 LASVWGALLSGCRIHNNVDLAELAVKELLQLENDVRGEEVGAYVQLSNIYLGARRGEDAI 429
Query: 183 RIRKMMGQRGIKKT 224
RIRKM+G+ GIKKT
Sbjct: 430 RIRKMIGESGIKKT 443
>ref|XP_006338488.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g28640-like [Solanum tuberosum]
Length = 512
Score = 79.7 bits (195), Expect = 4e-13
Identities = 39/73 (53%), Positives = 49/73 (67%)
Frame = +3
Query: 6 ASVWGALLTACRIHSNXXXXXXXXXXXXXXXHGNGSEEDGAYVQLSNIYLSANRGEDARR 185
ASVWGALL+ CR H+N GN +EED AYVQLSNIYL+A + +DARR
Sbjct: 395 ASVWGALLSGCRNHNNVNLAELAVKEILLVEDGNEAEEDSAYVQLSNIYLAARQCDDARR 454
Query: 186 IRKMMGQRGIKKT 224
IR+ +G RG++KT
Sbjct: 455 IRRRIGDRGLRKT 467
>ref|XP_004233685.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g28640-like [Solanum lycopersicum]
Length = 487
Score = 79.7 bits (195), Expect = 4e-13
Identities = 39/73 (53%), Positives = 49/73 (67%)
Frame = +3
Query: 6 ASVWGALLTACRIHSNXXXXXXXXXXXXXXXHGNGSEEDGAYVQLSNIYLSANRGEDARR 185
ASVWGALL+ CR H+N GN +EED AYVQLSNIYL+A + +DARR
Sbjct: 370 ASVWGALLSGCRNHNNVNLAELAVKEILLVEDGNEAEEDSAYVQLSNIYLAARQCDDARR 429
Query: 186 IRKMMGQRGIKKT 224
IR+ +G RG++KT
Sbjct: 430 IRRRIGDRGLRKT 442
>emb|CBI35029.3| unnamed protein product [Vitis vinifera]
Length = 1596
Score = 78.2 bits (191), Expect = 1e-12
Identities = 38/71 (53%), Positives = 49/71 (69%)
Frame = +3
Query: 6 ASVWGALLTACRIHSNXXXXXXXXXXXXXXXHGNGSEEDGAYVQLSNIYLSANRGEDARR 185
A+VWGALL+ CR H+N +G+G+EEDGAYVQLSNIYL+A + EDA R
Sbjct: 378 AAVWGALLSGCRTHNNVDLAELAARELLMVGNGDGTEEDGAYVQLSNIYLAAQKCEDACR 437
Query: 186 IRKMMGQRGIK 218
IR+M+G + IK
Sbjct: 438 IRRMIGDKRIK 448
>ref|XP_002276684.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g28640-like [Vitis vinifera]
Length = 511
Score = 78.2 bits (191), Expect = 1e-12
Identities = 38/71 (53%), Positives = 49/71 (69%)
Frame = +3
Query: 6 ASVWGALLTACRIHSNXXXXXXXXXXXXXXXHGNGSEEDGAYVQLSNIYLSANRGEDARR 185
A+VWGALL+ CR H+N +G+G+EEDGAYVQLSNIYL+A + EDA R
Sbjct: 378 AAVWGALLSGCRTHNNVDLAELAARELLMVGNGDGTEEDGAYVQLSNIYLAAQKCEDACR 437
Query: 186 IRKMMGQRGIK 218
IR+M+G + IK
Sbjct: 438 IRRMIGDKRIK 448
>ref|XP_007032423.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao] gi|508711452|gb|EOY03349.1|
Tetratricopeptide repeat (TPR)-like superfamily protein,
putative [Theobroma cacao]
Length = 499
Score = 76.3 bits (186), Expect = 4e-12
Identities = 38/73 (52%), Positives = 46/73 (63%)
Frame = +3
Query: 3 LASVWGALLTACRIHSNXXXXXXXXXXXXXXXHGNGSEEDGAYVQLSNIYLSANRGEDAR 182
LASVWGALL +CRI++N +G EED A VQLSNIY SA + ED
Sbjct: 384 LASVWGALLNSCRIYNNVQLAELAVKELLELEDCDGDEEDAALVQLSNIYFSAQKSEDGH 443
Query: 183 RIRKMMGQRGIKK 221
RIR+M+G RG+KK
Sbjct: 444 RIRRMIGDRGLKK 456
>ref|NP_001168258.1| hypothetical protein [Zea mays] gi|223947079|gb|ACN27623.1| unknown
[Zea mays] gi|413942312|gb|AFW74961.1| hypothetical
protein ZEAMMB73_025514 [Zea mays]
Length = 506
Score = 74.3 bits (181), Expect = 2e-11
Identities = 38/73 (52%), Positives = 46/73 (63%)
Frame = +3
Query: 3 LASVWGALLTACRIHSNXXXXXXXXXXXXXXXHGNGSEEDGAYVQLSNIYLSANRGEDAR 182
LASVWG++L CR H N GS ++G YVQLSNIYL ANR +DAR
Sbjct: 378 LASVWGSVLAGCRSHGNVELAEVAARELERL---GGSADEGVYVQLSNIYLDANRKDDAR 434
Query: 183 RIRKMMGQRGIKK 221
R+RK++G RGIKK
Sbjct: 435 RVRKLIGGRGIKK 447
>ref|XP_006395353.1| hypothetical protein EUTSA_v10005682mg [Eutrema salsugineum]
gi|557091992|gb|ESQ32639.1| hypothetical protein
EUTSA_v10005682mg [Eutrema salsugineum]
Length = 505
Score = 73.6 bits (179), Expect = 3e-11
Identities = 37/73 (50%), Positives = 43/73 (58%)
Frame = +3
Query: 3 LASVWGALLTACRIHSNXXXXXXXXXXXXXXXHGNGSEEDGAYVQLSNIYLSANRGEDAR 182
LASVWGALL CR H N GN EE+ A VQLSNIYL A R +A
Sbjct: 389 LASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNADEEEAALVQLSNIYLIAQRNTEAS 448
Query: 183 RIRKMMGQRGIKK 221
IR+M+GQ+GI+K
Sbjct: 449 NIRRMIGQKGIRK 461
>ref|XP_006650550.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g28660-like [Oryza brachyantha]
Length = 493
Score = 72.4 bits (176), Expect = 6e-11
Identities = 38/73 (52%), Positives = 49/73 (67%)
Frame = +3
Query: 3 LASVWGALLTACRIHSNXXXXXXXXXXXXXXXHGNGSEEDGAYVQLSNIYLSANRGEDAR 182
L SVWG++LT CRI++N G G++E G YVQLSNIYL ANR +DAR
Sbjct: 371 LTSVWGSVLTGCRIYANVELAEVAAGELAKL--GAGADE-GVYVQLSNIYLDANRKDDAR 427
Query: 183 RIRKMMGQRGIKK 221
R+RK++G RGI+K
Sbjct: 428 RVRKLIGSRGIRK 440
>ref|XP_003559455.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g28640-like [Brachypodium distachyon]
Length = 493
Score = 72.4 bits (176), Expect = 6e-11
Identities = 39/73 (53%), Positives = 48/73 (65%)
Frame = +3
Query: 3 LASVWGALLTACRIHSNXXXXXXXXXXXXXXXHGNGSEEDGAYVQLSNIYLSANRGEDAR 182
LASVWG+LL CR++ N G G++E G YVQLSNIYL ANR +DAR
Sbjct: 367 LASVWGSLLAGCRMYGNVELAEVAATELGKL--GAGADE-GVYVQLSNIYLDANRKDDAR 423
Query: 183 RIRKMMGQRGIKK 221
RIRK++G RG+KK
Sbjct: 424 RIRKLIGSRGLKK 436
>gb|EMS68422.1| hypothetical protein TRIUR3_23855 [Triticum urartu]
Length = 425
Score = 72.0 bits (175), Expect = 8e-11
Identities = 38/73 (52%), Positives = 48/73 (65%)
Frame = +3
Query: 3 LASVWGALLTACRIHSNXXXXXXXXXXXXXXXHGNGSEEDGAYVQLSNIYLSANRGEDAR 182
LASVWG+LL CR++ N G G++E G YVQLSNIYL ANR +DAR
Sbjct: 285 LASVWGSLLAGCRMYGNVELAEVAAKELEKL--GMGADE-GVYVQLSNIYLDANRKDDAR 341
Query: 183 RIRKMMGQRGIKK 221
R+RK++G RG+KK
Sbjct: 342 RVRKLIGNRGLKK 354
>gb|EMT01880.1| hypothetical protein F775_14784 [Aegilops tauschii]
Length = 426
Score = 71.6 bits (174), Expect = 1e-10
Identities = 38/73 (52%), Positives = 48/73 (65%)
Frame = +3
Query: 3 LASVWGALLTACRIHSNXXXXXXXXXXXXXXXHGNGSEEDGAYVQLSNIYLSANRGEDAR 182
LASVWG+LL CR++ N G G++E G YVQLSNIYL ANR +DAR
Sbjct: 285 LASVWGSLLAGCRMYGNVKLAEVAAKELEKL--GVGADE-GVYVQLSNIYLDANRKDDAR 341
Query: 183 RIRKMMGQRGIKK 221
R+RK++G RG+KK
Sbjct: 342 RVRKLIGSRGLKK 354
>ref|XP_002877120.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297322958|gb|EFH53379.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 399
Score = 71.6 bits (174), Expect = 1e-10
Identities = 36/74 (48%), Positives = 42/74 (56%)
Frame = +3
Query: 3 LASVWGALLTACRIHSNXXXXXXXXXXXXXXXHGNGSEEDGAYVQLSNIYLSANRGEDAR 182
LASVWGALL CR H N GN EE+ A VQLSNIY S R +A
Sbjct: 283 LASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNAEEEEAALVQLSNIYFSVQRNPEAS 342
Query: 183 RIRKMMGQRGIKKT 224
++R M+ QRGI+KT
Sbjct: 343 KVRGMIEQRGIRKT 356
>ref|XP_002439151.1| hypothetical protein SORBIDRAFT_09g001360 [Sorghum bicolor]
gi|190688727|gb|ACE86390.1| pentatricopeptide (PPR)
repeat-containing protein [Sorghum bicolor]
gi|241944436|gb|EES17581.1| hypothetical protein
SORBIDRAFT_09g001360 [Sorghum bicolor]
Length = 517
Score = 71.6 bits (174), Expect = 1e-10
Identities = 36/73 (49%), Positives = 46/73 (63%)
Frame = +3
Query: 3 LASVWGALLTACRIHSNXXXXXXXXXXXXXXXHGNGSEEDGAYVQLSNIYLSANRGEDAR 182
LASVWG++L CR + N G+ ++G YVQLSNIYL ANR +DAR
Sbjct: 380 LASVWGSVLAGCRSYGNVELAEVAVRELEKL---GGTADEGVYVQLSNIYLDANRKDDAR 436
Query: 183 RIRKMMGQRGIKK 221
R+RK++G RGIKK
Sbjct: 437 RVRKLIGSRGIKK 449
>gb|EEC76135.1| hypothetical protein OsI_13421 [Oryza sativa Indica Group]
Length = 406
Score = 70.5 bits (171), Expect = 2e-10
Identities = 36/73 (49%), Positives = 46/73 (63%)
Frame = +3
Query: 3 LASVWGALLTACRIHSNXXXXXXXXXXXXXXXHGNGSEEDGAYVQLSNIYLSANRGEDAR 182
LASVWG++LT CR ++N G + G YVQLSNIYL ANR +DAR
Sbjct: 283 LASVWGSVLTGCRTYANVELAEVAAAELGKLGAG---PDKGVYVQLSNIYLDANRKDDAR 339
Query: 183 RIRKMMGQRGIKK 221
R+RK++G RGI+K
Sbjct: 340 RVRKLIGSRGIRK 352
>gb|EAY88621.1| hypothetical protein OsI_10098 [Oryza sativa Indica Group]
Length = 313
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/73 (47%), Positives = 47/73 (64%)
Frame = +3
Query: 3 LASVWGALLTACRIHSNXXXXXXXXXXXXXXXHGNGSEEDGAYVQLSNIYLSANRGEDAR 182
LASVWG++LT CR ++N G ++G YVQLSNIYL +NR +DAR
Sbjct: 192 LASVWGSVLTGCRTYANVELAEVAAAEL-----GKLGADEGVYVQLSNIYLDSNRKDDAR 246
Query: 183 RIRKMMGQRGIKK 221
R+RK++G RGI+K
Sbjct: 247 RVRKLIGSRGIRK 259
>ref|NP_001173276.1| Os03g0158900 [Oryza sativa Japonica Group]
gi|22773237|gb|AAN06843.1| Hypothetical protein [Oryza
sativa Japonica Group] gi|108706287|gb|ABF94082.1|
pentatricopeptide, putative, expressed [Oryza sativa
Japonica Group] gi|125584986|gb|EAZ25650.1| hypothetical
protein OsJ_09480 [Oryza sativa Japonica Group]
gi|255674223|dbj|BAH92004.1| Os03g0158900 [Oryza sativa
Japonica Group]
Length = 490
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/73 (47%), Positives = 47/73 (64%)
Frame = +3
Query: 3 LASVWGALLTACRIHSNXXXXXXXXXXXXXXXHGNGSEEDGAYVQLSNIYLSANRGEDAR 182
LASVWG++LT CR ++N G ++G YVQLSNIYL +NR +DAR
Sbjct: 369 LASVWGSVLTGCRTYANVELAEVAAAEL-----GKLGADEGVYVQLSNIYLDSNRKDDAR 423
Query: 183 RIRKMMGQRGIKK 221
R+RK++G RGI+K
Sbjct: 424 RVRKLIGSRGIRK 436
>gb|EXB36666.1| hypothetical protein L484_002079 [Morus notabilis]
Length = 487
Score = 70.1 bits (170), Expect = 3e-10
Identities = 37/74 (50%), Positives = 46/74 (62%)
Frame = +3
Query: 3 LASVWGALLTACRIHSNXXXXXXXXXXXXXXXHGNGSEEDGAYVQLSNIYLSANRGEDAR 182
LASVWGALL+ CRI + + + +DG YVQLSNIYL+A R EDA
Sbjct: 355 LASVWGALLSGCRIRNYVDLAELAVKELVLLENEDKRGQDGVYVQLSNIYLAAQRTEDAV 414
Query: 183 RIRKMMGQRGIKKT 224
IRKM+G +GI+KT
Sbjct: 415 LIRKMIGDKGIRKT 428