BLASTX nr result
ID: Cocculus23_contig00031616
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00031616
(201 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004973240.1| PREDICTED: elongation factor Ts, mitochondri... 83 5e-14
ref|XP_006857587.1| hypothetical protein AMTR_s00061p00087560 [A... 82 8e-14
sp|B8BAI9.2|EFTS_ORYSI RecName: Full=Elongation factor Ts, mitoc... 81 1e-13
gb|EEC83537.1| hypothetical protein OsI_29150 [Oryza sativa Indi... 81 1e-13
ref|XP_006288226.1| hypothetical protein CARUB_v10001466mg [Caps... 80 4e-13
ref|NP_001061749.1| Os08g0399600 [Oryza sativa Japonica Group] g... 80 4e-13
gb|EEE68643.1| hypothetical protein OsJ_27216 [Oryza sativa Japo... 80 4e-13
tpg|DAA58656.1| TPA: hypothetical protein ZEAMMB73_211677 [Zea m... 79 5e-13
tpg|DAA58651.1| TPA: hypothetical protein ZEAMMB73_211677 [Zea m... 79 5e-13
ref|NP_001132619.1| elongation factor Ts, mitochondrial [Zea may... 79 5e-13
dbj|BAK05378.1| predicted protein [Hordeum vulgare subsp. vulgare] 79 9e-13
ref|XP_002872550.1| hypothetical protein ARALYDRAFT_489950 [Arab... 79 9e-13
ref|XP_003564186.1| PREDICTED: elongation factor Ts, mitochondri... 78 1e-12
ref|XP_006396954.1| hypothetical protein EUTSA_v10028718mg [Eutr... 77 2e-12
ref|NP_192850.2| putative translation elongation factor Ts [Arab... 77 2e-12
gb|EXC20561.1| Elongation factor Ts [Morus notabilis] 77 3e-12
ref|XP_006659344.1| PREDICTED: elongation factor Ts, mitochondri... 77 3e-12
ref|XP_002282316.1| PREDICTED: elongation factor Ts, mitochondri... 77 3e-12
ref|NP_001234645.1| ethylene-responsive elongation factor EF-Ts ... 76 4e-12
ref|XP_002524565.1| elongation factor ts, putative [Ricinus comm... 76 4e-12
>ref|XP_004973240.1| PREDICTED: elongation factor Ts, mitochondrial-like isoform X1
[Setaria italica] gi|514795198|ref|XP_004973241.1|
PREDICTED: elongation factor Ts, mitochondrial-like
isoform X2 [Setaria italica]
Length = 379
Score = 82.8 bits (203), Expect = 5e-14
Identities = 40/53 (75%), Positives = 46/53 (86%)
Frame = +3
Query: 42 MILRSFTVDVSASDKMSLIKHLRERTSAPIKDVKTALVNCNWDIEAAQKDLRK 200
M LR F+ VS+S++MSLIK LRERT APIKDVK +LV+CNWDIEAAQKDLRK
Sbjct: 45 MFLRRFSSQVSSSEQMSLIKQLRERTCAPIKDVKASLVSCNWDIEAAQKDLRK 97
>ref|XP_006857587.1| hypothetical protein AMTR_s00061p00087560 [Amborella trichopoda]
gi|548861683|gb|ERN19054.1| hypothetical protein
AMTR_s00061p00087560 [Amborella trichopoda]
Length = 391
Score = 82.0 bits (201), Expect = 8e-14
Identities = 39/53 (73%), Positives = 49/53 (92%)
Frame = +3
Query: 42 MILRSFTVDVSASDKMSLIKHLRERTSAPIKDVKTALVNCNWDIEAAQKDLRK 200
+++R F+V+VSAS++M+LIK LRERTSAPIK VK+ALV+C WDIEAAQKDLRK
Sbjct: 57 ILVRRFSVEVSASEQMNLIKQLRERTSAPIKAVKSALVDCKWDIEAAQKDLRK 109
>sp|B8BAI9.2|EFTS_ORYSI RecName: Full=Elongation factor Ts, mitochondrial; Short=EF-Ts;
Short=EF-TsMt; Flags: Precursor
Length = 385
Score = 81.3 bits (199), Expect = 1e-13
Identities = 38/52 (73%), Positives = 47/52 (90%)
Frame = +3
Query: 45 ILRSFTVDVSASDKMSLIKHLRERTSAPIKDVKTALVNCNWDIEAAQKDLRK 200
+LR F+ +V AS++M+LIK LRERTSAPIKDVK +LV+CNWDI+AAQKDLRK
Sbjct: 46 LLRRFSSEVPASEQMNLIKQLRERTSAPIKDVKASLVSCNWDIDAAQKDLRK 97
>gb|EEC83537.1| hypothetical protein OsI_29150 [Oryza sativa Indica Group]
Length = 175
Score = 81.3 bits (199), Expect = 1e-13
Identities = 38/52 (73%), Positives = 47/52 (90%)
Frame = +3
Query: 45 ILRSFTVDVSASDKMSLIKHLRERTSAPIKDVKTALVNCNWDIEAAQKDLRK 200
+LR F+ +V AS++M+LIK LRERTSAPIKDVK +LV+CNWDI+AAQKDLRK
Sbjct: 46 LLRRFSSEVPASEQMNLIKQLRERTSAPIKDVKASLVSCNWDIDAAQKDLRK 97
>ref|XP_006288226.1| hypothetical protein CARUB_v10001466mg [Capsella rubella]
gi|482556932|gb|EOA21124.1| hypothetical protein
CARUB_v10001466mg [Capsella rubella]
Length = 321
Score = 79.7 bits (195), Expect = 4e-13
Identities = 38/51 (74%), Positives = 44/51 (86%)
Frame = +3
Query: 48 LRSFTVDVSASDKMSLIKHLRERTSAPIKDVKTALVNCNWDIEAAQKDLRK 200
LRSF+ + SD+MSLIK LR+RTSAPIKDVK +LV CNWD+EAAQKDLRK
Sbjct: 60 LRSFSSTPAVSDQMSLIKQLRQRTSAPIKDVKASLVECNWDLEAAQKDLRK 110
>ref|NP_001061749.1| Os08g0399600 [Oryza sativa Japonica Group]
gi|75294316|sp|Q6ZJS7.1|EFTS_ORYSJ RecName:
Full=Elongation factor Ts, mitochondrial; Short=EF-Ts;
Short=EF-TsMt; Flags: Precursor
gi|37805964|dbj|BAC99379.1| putative ethylene-responsive
elongation factor EF-Ts precursor [Oryza sativa Japonica
Group] gi|113623718|dbj|BAF23663.1| Os08g0399600 [Oryza
sativa Japonica Group] gi|215701316|dbj|BAG92740.1|
unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 79.7 bits (195), Expect = 4e-13
Identities = 37/52 (71%), Positives = 46/52 (88%)
Frame = +3
Query: 45 ILRSFTVDVSASDKMSLIKHLRERTSAPIKDVKTALVNCNWDIEAAQKDLRK 200
+LR F+ +V AS++M+LIK LRERTSAPIKDVK +LV+CNWDI+ AQKDLRK
Sbjct: 46 LLRRFSSEVPASEQMNLIKQLRERTSAPIKDVKASLVSCNWDIDVAQKDLRK 97
>gb|EEE68643.1| hypothetical protein OsJ_27216 [Oryza sativa Japonica Group]
Length = 247
Score = 79.7 bits (195), Expect = 4e-13
Identities = 37/52 (71%), Positives = 46/52 (88%)
Frame = +3
Query: 45 ILRSFTVDVSASDKMSLIKHLRERTSAPIKDVKTALVNCNWDIEAAQKDLRK 200
+LR F+ +V AS++M+LIK LRERTSAPIKDVK +LV+CNWDI+ AQKDLRK
Sbjct: 118 LLRRFSSEVPASEQMNLIKQLRERTSAPIKDVKASLVSCNWDIDVAQKDLRK 169
>tpg|DAA58656.1| TPA: hypothetical protein ZEAMMB73_211677 [Zea mays]
Length = 260
Score = 79.3 bits (194), Expect = 5e-13
Identities = 37/53 (69%), Positives = 46/53 (86%)
Frame = +3
Query: 42 MILRSFTVDVSASDKMSLIKHLRERTSAPIKDVKTALVNCNWDIEAAQKDLRK 200
+ +R F +VS+S++M+LIK LR+RTSAPIKDVK +LV CNWDIEAAQKDLRK
Sbjct: 45 VFIRRFGSEVSSSEQMNLIKQLRQRTSAPIKDVKASLVTCNWDIEAAQKDLRK 97
>tpg|DAA58651.1| TPA: hypothetical protein ZEAMMB73_211677 [Zea mays]
Length = 381
Score = 79.3 bits (194), Expect = 5e-13
Identities = 37/53 (69%), Positives = 46/53 (86%)
Frame = +3
Query: 42 MILRSFTVDVSASDKMSLIKHLRERTSAPIKDVKTALVNCNWDIEAAQKDLRK 200
+ +R F +VS+S++M+LIK LR+RTSAPIKDVK +LV CNWDIEAAQKDLRK
Sbjct: 45 VFIRRFGSEVSSSEQMNLIKQLRQRTSAPIKDVKASLVTCNWDIEAAQKDLRK 97
>ref|NP_001132619.1| elongation factor Ts, mitochondrial [Zea mays]
gi|313118222|sp|B4FHF0.1|EFTS_MAIZE RecName:
Full=Elongation factor Ts, mitochondrial; Short=EF-Ts;
Short=EF-TsMt; Flags: Precursor
gi|194694918|gb|ACF81543.1| unknown [Zea mays]
gi|414881521|tpg|DAA58652.1| TPA: elongation factor Ts
isoform 1 [Zea mays] gi|414881522|tpg|DAA58653.1| TPA:
elongation factor Ts isoform 2 [Zea mays]
gi|414881523|tpg|DAA58654.1| TPA: elongation factor Ts
isoform 3 [Zea mays] gi|414881524|tpg|DAA58655.1| TPA:
elongation factor Ts isoform 4 [Zea mays]
Length = 379
Score = 79.3 bits (194), Expect = 5e-13
Identities = 37/53 (69%), Positives = 46/53 (86%)
Frame = +3
Query: 42 MILRSFTVDVSASDKMSLIKHLRERTSAPIKDVKTALVNCNWDIEAAQKDLRK 200
+ +R F +VS+S++M+LIK LR+RTSAPIKDVK +LV CNWDIEAAQKDLRK
Sbjct: 45 VFIRRFGSEVSSSEQMNLIKQLRQRTSAPIKDVKASLVTCNWDIEAAQKDLRK 97
>dbj|BAK05378.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 379
Score = 78.6 bits (192), Expect = 9e-13
Identities = 41/66 (62%), Positives = 50/66 (75%)
Frame = +3
Query: 3 SSNGYSHIGSLRKMILRSFTVDVSASDKMSLIKHLRERTSAPIKDVKTALVNCNWDIEAA 182
SSN ++ G MI R F+ +V AS++M+LI+ LRERT APIKDVK +LV CNWDIE A
Sbjct: 36 SSNHFAQNG----MIRRRFSSEVPASEQMNLIRQLRERTCAPIKDVKASLVTCNWDIEDA 91
Query: 183 QKDLRK 200
QKDLRK
Sbjct: 92 QKDLRK 97
>ref|XP_002872550.1| hypothetical protein ARALYDRAFT_489950 [Arabidopsis lyrata subsp.
lyrata] gi|297318387|gb|EFH48809.1| hypothetical protein
ARALYDRAFT_489950 [Arabidopsis lyrata subsp. lyrata]
Length = 394
Score = 78.6 bits (192), Expect = 9e-13
Identities = 42/66 (63%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Frame = +3
Query: 6 SNGYSHIGSLRKMILRSFTVDVSA-SDKMSLIKHLRERTSAPIKDVKTALVNCNWDIEAA 182
S+GY+ +RSF+ + A SD+MSLIK LRERTSAPIKDVK +LV CNWD+EAA
Sbjct: 46 SSGYTSPVRGFGSFIRSFSSEAPAVSDQMSLIKQLRERTSAPIKDVKASLVECNWDLEAA 105
Query: 183 QKDLRK 200
QKDLRK
Sbjct: 106 QKDLRK 111
>ref|XP_003564186.1| PREDICTED: elongation factor Ts, mitochondrial-like [Brachypodium
distachyon]
Length = 372
Score = 77.8 bits (190), Expect = 1e-12
Identities = 37/53 (69%), Positives = 45/53 (84%)
Frame = +3
Query: 42 MILRSFTVDVSASDKMSLIKHLRERTSAPIKDVKTALVNCNWDIEAAQKDLRK 200
M+LR F+ +V AS++ +LIK LR RTSAP KDVK +LVNCNW+IEAAQKDLRK
Sbjct: 45 MLLRGFSSEVPASEQTNLIKQLRIRTSAPFKDVKASLVNCNWNIEAAQKDLRK 97
>ref|XP_006396954.1| hypothetical protein EUTSA_v10028718mg [Eutrema salsugineum]
gi|557097971|gb|ESQ38407.1| hypothetical protein
EUTSA_v10028718mg [Eutrema salsugineum]
Length = 392
Score = 77.4 bits (189), Expect = 2e-12
Identities = 41/65 (63%), Positives = 50/65 (76%)
Frame = +3
Query: 6 SNGYSHIGSLRKMILRSFTVDVSASDKMSLIKHLRERTSAPIKDVKTALVNCNWDIEAAQ 185
S+GY+ LRSF+ + + SD+MSLIK LR+RTSAPIKDVK +LV CNWD+EAAQ
Sbjct: 46 SHGYASPVRGFGKFLRSFSSE-AVSDQMSLIKQLRQRTSAPIKDVKASLVECNWDLEAAQ 104
Query: 186 KDLRK 200
KDLRK
Sbjct: 105 KDLRK 109
>ref|NP_192850.2| putative translation elongation factor Ts [Arabidopsis thaliana]
gi|75287865|sp|Q5XF75.1|EFTS_ARATH RecName:
Full=Elongation factor Ts, mitochondrial; Short=EF-Ts;
Short=EF-TsMt; Flags: Precursor
gi|52627103|gb|AAU84678.1| At4g11120 [Arabidopsis
thaliana] gi|55167888|gb|AAV43776.1| At4g11120
[Arabidopsis thaliana] gi|332657575|gb|AEE82975.1|
putative translation elongation factor Ts [Arabidopsis
thaliana]
Length = 395
Score = 77.4 bits (189), Expect = 2e-12
Identities = 40/66 (60%), Positives = 50/66 (75%), Gaps = 2/66 (3%)
Frame = +3
Query: 9 NGYSHIGSLRKMILRSFTVDV--SASDKMSLIKHLRERTSAPIKDVKTALVNCNWDIEAA 182
+GY+ + +RSF+ + + SD+MSLIK LRERTSAPIKDVK +LV CNWD+EAA
Sbjct: 47 SGYTSLVRGFGNFIRSFSSEAPPAVSDQMSLIKQLRERTSAPIKDVKASLVECNWDLEAA 106
Query: 183 QKDLRK 200
QKDLRK
Sbjct: 107 QKDLRK 112
>gb|EXC20561.1| Elongation factor Ts [Morus notabilis]
Length = 386
Score = 76.6 bits (187), Expect = 3e-12
Identities = 36/50 (72%), Positives = 42/50 (84%)
Frame = +3
Query: 51 RSFTVDVSASDKMSLIKHLRERTSAPIKDVKTALVNCNWDIEAAQKDLRK 200
R F + SA D++ LIK LRERTSAPIKDVK +L++CNWDIEAAQKDLRK
Sbjct: 66 RRFGSEASAVDQLDLIKQLRERTSAPIKDVKASLIDCNWDIEAAQKDLRK 115
>ref|XP_006659344.1| PREDICTED: elongation factor Ts, mitochondrial-like [Oryza
brachyantha]
Length = 379
Score = 76.6 bits (187), Expect = 3e-12
Identities = 42/76 (55%), Positives = 54/76 (71%), Gaps = 10/76 (13%)
Frame = +3
Query: 3 SSNGYS------HIGSLRK----MILRSFTVDVSASDKMSLIKHLRERTSAPIKDVKTAL 152
++ GYS H+ S R +LR F+ +V A +++SLIK LRERT APIKDVK +L
Sbjct: 22 AARGYSNSAFQAHLSSRRVEQSGTLLRRFSSEVPALEQISLIKKLRERTCAPIKDVKASL 81
Query: 153 VNCNWDIEAAQKDLRK 200
V+CNWDI+AAQKDLRK
Sbjct: 82 VSCNWDIDAAQKDLRK 97
>ref|XP_002282316.1| PREDICTED: elongation factor Ts, mitochondrial [Vitis vinifera]
gi|297738982|emb|CBI28227.3| unnamed protein product
[Vitis vinifera]
Length = 378
Score = 76.6 bits (187), Expect = 3e-12
Identities = 35/50 (70%), Positives = 43/50 (86%)
Frame = +3
Query: 51 RSFTVDVSASDKMSLIKHLRERTSAPIKDVKTALVNCNWDIEAAQKDLRK 200
R F+ + AS+ M+LIK LRERTS+PIKDVK AL++CNWDIEAAQK+LRK
Sbjct: 45 RRFSAEAPASEHMNLIKQLRERTSSPIKDVKAALIDCNWDIEAAQKELRK 94
>ref|NP_001234645.1| ethylene-responsive elongation factor EF-Ts precursor [Solanum
lycopersicum] gi|5669636|gb|AAD46403.1|AF096247_1
ethylene-responsive elongation factor EF-Ts precursor
[Solanum lycopersicum]
Length = 391
Score = 76.3 bits (186), Expect = 4e-12
Identities = 35/51 (68%), Positives = 45/51 (88%)
Frame = +3
Query: 48 LRSFTVDVSASDKMSLIKHLRERTSAPIKDVKTALVNCNWDIEAAQKDLRK 200
+R ++ ++S+S++M+LIK LRERTSAPIK+VK ALV NWDIEAAQKDLRK
Sbjct: 59 IRRYSAEISSSEQMNLIKQLRERTSAPIKEVKAALVTSNWDIEAAQKDLRK 109
>ref|XP_002524565.1| elongation factor ts, putative [Ricinus communis]
gi|313118247|sp|B9SEZ6.1|EFTS_RICCO RecName:
Full=Elongation factor Ts, mitochondrial; Short=EF-Ts;
Short=EF-TsMt; Flags: Precursor
gi|223536118|gb|EEF37773.1| elongation factor ts,
putative [Ricinus communis]
Length = 379
Score = 76.3 bits (186), Expect = 4e-12
Identities = 38/54 (70%), Positives = 46/54 (85%), Gaps = 1/54 (1%)
Frame = +3
Query: 42 MILRSFTVDV-SASDKMSLIKHLRERTSAPIKDVKTALVNCNWDIEAAQKDLRK 200
M +R F+ +A+++MSLIK LRERTSAPIKDVK +LV+CNWDIEAAQKDLRK
Sbjct: 41 MFVRLFSAHAPAAAEQMSLIKQLRERTSAPIKDVKASLVDCNWDIEAAQKDLRK 94