BLASTX nr result
ID: Cocculus23_contig00031557
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00031557
(909 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002517741.1| conserved hypothetical protein [Ricinus comm... 82 4e-13
ref|XP_002518274.1| conserved hypothetical protein [Ricinus comm... 78 4e-12
ref|XP_002535828.1| conserved hypothetical protein [Ricinus comm... 61 2e-11
ref|XP_002451896.1| hypothetical protein SORBIDRAFT_04g009491 [S... 70 5e-11
emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera] 73 2e-10
ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medica... 71 5e-10
ref|XP_002534687.1| NADH-ubiquinone oxidoreductase chain, putati... 58 6e-09
tpg|DAA47075.1| TPA: hypothetical protein ZEAMMB73_027346 [Zea m... 62 3e-07
>ref|XP_002517741.1| conserved hypothetical protein [Ricinus communis]
gi|223543139|gb|EEF44673.1| conserved hypothetical
protein [Ricinus communis]
Length = 111
Score = 81.6 bits (200), Expect = 4e-13
Identities = 44/63 (69%), Positives = 48/63 (76%)
Frame = -1
Query: 891 KKPPRHSWRVGSSVVAGELLARRP*DKLLKQTGGEDRPVQ*NSEERLLAAGGEMSLAPFK 712
K P HS RVGSS+VAG+LL RRP LKQ G EDRPVQ N EERLLA GG++SLA FK
Sbjct: 37 KIAPHHSRRVGSSIVAGQLLVRRP--YFLKQKGEEDRPVQSNFEERLLAVGGDLSLALFK 94
Query: 711 RKC 703
RKC
Sbjct: 95 RKC 97
>ref|XP_002518274.1| conserved hypothetical protein [Ricinus communis]
gi|223542494|gb|EEF44034.1| conserved hypothetical
protein [Ricinus communis]
Length = 431
Score = 78.2 bits (191), Expect = 4e-12
Identities = 45/84 (53%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +3
Query: 648 LRTGPHPILESSAELYPARISF*-RGPKTFLHLLPTVFLRNSTERVDPPLPFVLATYPKV 824
+ GP+PILE SA L PA F + PK LHLLPTVFL+N ERVDPP FVLATYPKV
Sbjct: 1 MHKGPYPILEPSAGLNPAPPHFLLKRPKKGLHLLPTVFLQNLIERVDPPPHFVLATYPKV 60
Query: 825 XXXXXXXXXXXXXXXXCGGAAFLF 896
CGGA F F
Sbjct: 61 SSLRVPRRRQKNQPVCCGGALFFF 84
>ref|XP_002535828.1| conserved hypothetical protein [Ricinus communis]
gi|255608154|ref|XP_002538850.1| conserved hypothetical
protein [Ricinus communis] gi|223510119|gb|EEF23533.1|
conserved hypothetical protein [Ricinus communis]
gi|223521805|gb|EEF26555.1| conserved hypothetical
protein [Ricinus communis]
Length = 86
Score = 60.8 bits (146), Expect(2) = 2e-11
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = -3
Query: 799 NGRGGSTRSVEFRRKTVGSRWRNVFGPLQKEMR 701
+G GGSTRSV+FRRKTVGSRWR FGPLQKEMR
Sbjct: 36 DGGGGSTRSVKFRRKTVGSRWRPFFGPLQKEMR 68
Score = 35.8 bits (81), Expect(2) = 2e-11
Identities = 18/25 (72%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = -2
Query: 722 PPSKGNAGR-VELGRGFENRVGSCP 651
P K GR V+LGRGFENRVGSCP
Sbjct: 62 PLQKEMRGRGVKLGRGFENRVGSCP 86
>ref|XP_002451896.1| hypothetical protein SORBIDRAFT_04g009491 [Sorghum bicolor]
gi|241931727|gb|EES04872.1| hypothetical protein
SORBIDRAFT_04g009491 [Sorghum bicolor]
Length = 289
Score = 70.1 bits (170), Expect(2) = 5e-11
Identities = 28/30 (93%), Positives = 30/30 (100%)
Frame = +1
Query: 169 YACIFRLDSQIFCFSGGGEQCSLRCGRCPP 258
YAC+FRLDS+IFCFSGGGEQCSLRCGRCPP
Sbjct: 239 YACLFRLDSRIFCFSGGGEQCSLRCGRCPP 268
Score = 24.6 bits (52), Expect(2) = 5e-11
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +3
Query: 138 RRRPLSLDYYLCMY 179
+R PLSLD+Y C++
Sbjct: 230 KRGPLSLDHYACLF 243
>emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]
Length = 280
Score = 72.8 bits (177), Expect = 2e-10
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = +1
Query: 808 QLILRSPRQELPGDDRGANPPAVAGRLFCFTIRP 909
QLILRSPRQELPGDDRG NPPAVAGRLFCFTIRP
Sbjct: 135 QLILRSPRQELPGDDRGTNPPAVAGRLFCFTIRP 168
Score = 67.0 bits (162), Expect = 1e-08
Identities = 56/137 (40%), Positives = 62/137 (45%), Gaps = 3/137 (2%)
Frame = +2
Query: 2 NNGRVRGGPKAELTGGGWSKLQ*VATPF---SGNRT*DFRIIRLRPELPSSALVIRLLSM 172
NNGRVRGGPKAELTGGGWSKL + F G R R P P
Sbjct: 30 NNGRVRGGPKAELTGGGWSKLHLDSRIFCFSGGGEQCSLRCGRCPPVGPG---------- 79
Query: 173 HVFSAWTLKSFASRVVANNAACVAGDARPKEPLTS*AD*WEGAVKNHAFRTERNARLPNP 352
+ A +S ASR G R +NHAFRTERNARLP
Sbjct: 80 -LLPARKNRSLASRTSG-------GPIRRH-------------TENHAFRTERNARLPKK 118
Query: 353 EKWARWEERWSAACRAH 403
+K +R SAACRAH
Sbjct: 119 KKNGLVGKR-SAACRAH 134
>ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
gi|355477316|gb|AES58519.1| NADH-ubiquinone
oxidoreductase chain [Medicago truncatula]
Length = 556
Score = 71.2 bits (173), Expect = 5e-10
Identities = 52/115 (45%), Positives = 59/115 (51%), Gaps = 7/115 (6%)
Frame = -3
Query: 325 GSKGMVFYGPL-------PLVRLASERFFRAGISRNASCIVRHHPRSKRFESPGGKYMHR 167
GS+ F+GPL PLVRLASERFFRA + H P+ K SP
Sbjct: 257 GSRWRHFFGPLKKKGNGPPLVRLASERFFRARSGPGPTG--GHLPQRKLHCSP------- 307
Query: 166 **SNDKGRRRKLGTEPYDAEVSRTVP*EGSGYLLELRPTTTGQFRFGATPYSTVI 2
P D + R E SGYLLELRPTTTG+FRFGATPYST+I
Sbjct: 308 ---------------PPDKQKIR----ESSGYLLELRPTTTGKFRFGATPYSTII 343
>ref|XP_002534687.1| NADH-ubiquinone oxidoreductase chain, putative [Ricinus communis]
gi|223524771|gb|EEF27701.1| NADH-ubiquinone
oxidoreductase chain, putative [Ricinus communis]
Length = 366
Score = 57.8 bits (138), Expect(2) = 6e-09
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = -3
Query: 91 P*EGSGYLLELRPTTTGQFRFGATPYSTVI 2
P +G GYLLELRPTTTGQFRFGATPYST+I
Sbjct: 23 PEKGVGYLLELRPTTTGQFRFGATPYSTII 52
Score = 30.0 bits (66), Expect(2) = 6e-09
Identities = 16/27 (59%), Positives = 16/27 (59%)
Frame = -1
Query: 156 MTRAXXXXXXXXXXXRKSHVRFPEKGV 76
MTRA RKSHVRFPEKGV
Sbjct: 1 MTRADDGSSGRSRMMRKSHVRFPEKGV 27
>tpg|DAA47075.1| TPA: hypothetical protein ZEAMMB73_027346 [Zea mays]
Length = 88
Score = 62.0 bits (149), Expect = 3e-07
Identities = 26/28 (92%), Positives = 26/28 (92%)
Frame = -2
Query: 794 EGRIDPFSRIPKKDCWQQVEKCLWPPSK 711
EGRIDPFSRIPKKDCWQQVE LWPPSK
Sbjct: 61 EGRIDPFSRIPKKDCWQQVETFLWPPSK 88