BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00031550
         (1380 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cuc...   446   e-122
gb|EXB60277.1| hypothetical protein L484_005875 [Morus notabilis]     426   e-117
ref|XP_004295870.1| PREDICTED: pentatricopeptide repeat-containi...   426   e-116
ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containi...   387   e-105
ref|XP_002275535.1| PREDICTED: pentatricopeptide repeat-containi...   366   1e-98
ref|XP_004509956.1| PREDICTED: pentatricopeptide repeat-containi...   258   3e-66
ref|XP_003628741.1| Pentatricopeptide repeat-containing protein ...   257   7e-66
ref|XP_004292199.1| PREDICTED: pentatricopeptide repeat-containi...   252   2e-64
ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containi...   247   1e-62
emb|CBI16398.3| unnamed protein product [Vitis vinifera]              246   1e-62
ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containi...   246   1e-62
emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]   246   2e-62
ref|XP_004306131.1| PREDICTED: pentatricopeptide repeat-containi...   242   3e-61
ref|XP_007200721.1| hypothetical protein PRUPE_ppa025321mg [Prun...   241   4e-61
gb|EYU39274.1| hypothetical protein MIMGU_mgv1a004625mg [Mimulus...   241   6e-61
gb|EYU25996.1| hypothetical protein MIMGU_mgv1a024459mg, partial...   240   1e-60
ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containi...   240   1e-60
ref|XP_004491829.1| PREDICTED: pentatricopeptide repeat-containi...   239   2e-60
ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containi...   237   8e-60
ref|XP_002301860.2| pentatricopeptide repeat-containing family p...   237   1e-59

>ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
          Length = 2355

 Score =  446 bits (1146), Expect = e-122
 Identities = 220/352 (62%), Positives = 272/352 (77%), Gaps = 1/352 (0%)
 Frame = +1

Query: 325  RKLATLLLKCTAQLSMKQLLQVQAQIVTCAPPDLDDNLVAVKLIGVCSTHYKLNHAAFVF 504
            RK   LLL+C  QLSM+QL ++QAQI+    P +D N++AVK IGV S+H  L H+  +F
Sbjct: 22   RKTIHLLLRCATQLSMRQLFEIQAQIIASPIPSIDPNIIAVKFIGVSSSHGNLRHSVLIF 81

Query: 505  AQ-LHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPCASNPDDYTFTSVLKACAGLL 681
               L  PN+ A+NA+LKA +Q++ W  T+ YFN  L  P A NPD+YTFTSVLKACAGL 
Sbjct: 82   NHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLA 141

Query: 682  SVIDGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFGYPTIAQQLFDEMTVRDVVSWNILVS 861
             V++G KVH +V K G +SNL+VRNSLVD+YFK G   IAQ+LFDEM VRDVVSWN L+S
Sbjct: 142  QVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLIS 201

Query: 862  GYASYGDVESAKVVFDRMVERNFVTWSTMIAGFARSGNLDAARKLFDEMTERNVVCWNAM 1041
            GY   G V+ A++VFD M+E+N V+WSTMI+G+AR GNL+ AR+LF+ M  RNVV WNAM
Sbjct: 202  GYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVSWNAM 261

Query: 1042 IAGYVQNERYSDAVNLFRQMQQVGGLRPSDVTLVSVLSACAHLGALDLGKWVDRFITRSG 1221
            IAGY QNE+Y+DA+ LFRQMQ  GGL P+DVTLVSVLSACAHLGALDLGKW+ RFI R+ 
Sbjct: 262  IAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNK 321

Query: 1222 TELNLFLGNALADMFVKCGFLADAKRVFDKMLERDVVSWSIIICGSAMHGHA 1377
             E+ LFLGNALADM+ KCG + +AK VF +M ERDV+SWSIII G AM+G+A
Sbjct: 322  IEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYA 373



 Score =  100 bits (248), Expect = 2e-18
 Identities = 57/182 (31%), Positives = 97/182 (53%), Gaps = 4/182 (2%)
 Frame = +1

Query: 481  LNHAAFVFAQLHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPCASNPDDYTFTSVL 660
            L  A  +F  +   N+++WNA++  +AQN K+A+ +  F  +      + P+D T  SVL
Sbjct: 240  LEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLA-PNDVTLVSVL 298

Query: 661  KACAGLLSVIDGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFGYPTIAQQLFDEMTVRDVV 840
             ACA L ++  G  +H ++ +   +  L++ N+L DMY K G    A+ +F EM  RDV+
Sbjct: 299  SACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVI 358

Query: 841  SWNILVSGYASYGDVESAKVVFDRMV----ERNFVTWSTMIAGFARSGNLDAARKLFDEM 1008
            SW+I++ G A YG    A   F  M+    E N +++  ++     +G +D   + FD M
Sbjct: 359  SWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMM 418

Query: 1009 TE 1014
             +
Sbjct: 419  PQ 420



 Score = 87.4 bits (215), Expect = 1e-14
 Identities = 65/258 (25%), Positives = 118/258 (45%), Gaps = 42/258 (16%)
 Frame = +1

Query: 733  QSNLYVRNSLVDMYFKFGYPTIAQQLFDEMTVRDVVSWNILVSGYASYGDVESAKVVFDR 912
            + NL   ++++  Y + G    A+QLF+ M +R+VVSWN +++GYA       A  +F +
Sbjct: 221  EKNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQ 280

Query: 913  MVER-----NFVTWSTMIAGFARSGNLDA------------------------------- 984
            M        N VT  ++++  A  G LD                                
Sbjct: 281  MQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCG 340

Query: 985  ----ARKLFDEMTERNVVCWNAMIAGYVQNERYSDAVNLFRQMQQVGGLRPSDVTLVSVL 1152
                A+ +F EM ER+V+ W+ +I G       ++A N F +M +  GL P+D++ + +L
Sbjct: 341  CVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIE-DGLEPNDISFMGLL 399

Query: 1153 SACAHLGALDLG-KWVDRFITRSGTELNLFLGNALADMFVKCGFLADAKRVFDKM-LERD 1326
            +AC H G +D G ++ D      G    +     + D+  + G L  A+ + + M ++ +
Sbjct: 400  TACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPN 459

Query: 1327 VVSWSIIICGSAMHGHAE 1380
            V+ W  ++ G  ++  AE
Sbjct: 460  VIVWGALLGGCRIYKDAE 477


>gb|EXB60277.1| hypothetical protein L484_005875 [Morus notabilis]
          Length = 720

 Score =  426 bits (1096), Expect = e-117
 Identities = 214/364 (58%), Positives = 267/364 (73%), Gaps = 1/364 (0%)
 Frame = +1

Query: 289  ALQLQXXXXXXRRKLATLLLKCTAQLSMKQLLQVQAQIVTCAPPDLDDNLVAVKLIGVCS 468
            AL L         +L  LLLKC A+L+M+ L Q+QAQ+     P LD NLVAVKLIGVC+
Sbjct: 68   ALALLHGHTNNHPRLTHLLLKCAAKLTMRHLYQIQAQVTAHPIPSLDPNLVAVKLIGVCA 127

Query: 469  THYKLNHAAFVFAQ-LHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPCASNPDDYT 645
             H  + H   +FA  L  PN+ A+NA+LKA AQ++ W  T R+FN  L  P A  PD+Y+
Sbjct: 128  AHANVRHGVQIFAHYLPTPNIFAYNAVLKAFAQHNDWDNTFRWFNRQLLDPNAPIPDEYS 187

Query: 646  FTSVLKACAGLLSVIDGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFGYPTIAQQLFDEMT 825
            FTSVLKACAGL +  +G KVH  V K G   NL+VRNSLV  YF+ G   IA ++FDEM 
Sbjct: 188  FTSVLKACAGLGAAAEGRKVHCVVTKYGCDGNLFVRNSLVAFYFRIGCFDIAHEMFDEMP 247

Query: 826  VRDVVSWNILVSGYASYGDVESAKVVFDRMVERNFVTWSTMIAGFARSGNLDAARKLFDE 1005
            VRDVVSWN LV+GY   G V  A+VVFD MVERN V+WSTM++G+A++G+L+ AR+LFDE
Sbjct: 248  VRDVVSWNTLVAGYCLSGRVGDAQVVFDGMVERNLVSWSTMVSGYAKAGHLEEARRLFDE 307

Query: 1006 MTERNVVCWNAMIAGYVQNERYSDAVNLFRQMQQVGGLRPSDVTLVSVLSACAHLGALDL 1185
            M ERNV  WNAMIAGY QN +Y++A+ LFR+MQ V GL P+++TLVSVLSACAHLGALDL
Sbjct: 308  MPERNVGSWNAMIAGYAQNMKYAEAIELFRRMQGVEGLVPNEITLVSVLSACAHLGALDL 367

Query: 1186 GKWVDRFITRSGTELNLFLGNALADMFVKCGFLADAKRVFDKMLERDVVSWSIIICGSAM 1365
            G+WVDRFI R G EL+  LGNAL DM+ KCG + +A+R+F+ M ERDV+SWS+II G AM
Sbjct: 368  GRWVDRFIRRKGMELSPLLGNALVDMYAKCGCITEARRIFNTMQERDVISWSVIITGLAM 427

Query: 1366 HGHA 1377
            +GHA
Sbjct: 428  NGHA 431



 Score = 99.0 bits (245), Expect = 4e-18
 Identities = 58/180 (32%), Positives = 98/180 (54%), Gaps = 4/180 (2%)
 Frame = +1

Query: 481  LNHAAFVFAQLHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPCASNPDDYTFTSVL 660
            L  A  +F ++   N+ +WNA++  +AQN K+AE +  F  +        P++ T  SVL
Sbjct: 298  LEEARRLFDEMPERNVGSWNAMIAGYAQNMKYAEAIELFRRMQGVE-GLVPNEITLVSVL 356

Query: 661  KACAGLLSVIDGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFGYPTIAQQLFDEMTVRDVV 840
             ACA L ++  G  V  ++ + G + +  + N+LVDMY K G  T A+++F+ M  RDV+
Sbjct: 357  SACAHLGALDLGRWVDRFIRRKGMELSPLLGNALVDMYAKCGCITEARRIFNTMQERDVI 416

Query: 841  SWNILVSGYASYGDVESAKVVFDRMVER----NFVTWSTMIAGFARSGNLDAARKLFDEM 1008
            SW+++++G A  G    A   FD M+E     N +T+  ++     +G +D   + FD M
Sbjct: 417  SWSVIITGLAMNGHASEALERFDAMIEHGMRPNDITFMGLLTACTHAGLVDKGLRYFDVM 476



 Score = 94.7 bits (234), Expect = 8e-17
 Identities = 67/258 (25%), Positives = 121/258 (46%), Gaps = 42/258 (16%)
 Frame = +1

Query: 733  QSNLYVRNSLVDMYFKFGYPTIAQQLFDEMTVRDVVSWNILVSGYASYGDVESAKVVF-- 906
            + NL   +++V  Y K G+   A++LFDEM  R+V SWN +++GYA       A  +F  
Sbjct: 279  ERNLVSWSTMVSGYAKAGHLEEARRLFDEMPERNVGSWNAMIAGYAQNMKYAEAIELFRR 338

Query: 907  ---------------------------------DRMVERNFVTWSTMIAG-----FARSG 972
                                             DR + R  +  S ++       +A+ G
Sbjct: 339  MQGVEGLVPNEITLVSVLSACAHLGALDLGRWVDRFIRRKGMELSPLLGNALVDMYAKCG 398

Query: 973  NLDAARKLFDEMTERNVVCWNAMIAGYVQNERYSDAVNLFRQMQQVGGLRPSDVTLVSVL 1152
             +  AR++F+ M ER+V+ W+ +I G   N   S+A+  F  M +  G+RP+D+T + +L
Sbjct: 399  CITEARRIFNTMQERDVISWSVIITGLAMNGHASEALERFDAMIE-HGMRPNDITFMGLL 457

Query: 1153 SACAHLGALDLG-KWVDRFITRSGTELNLFLGNALADMFVKCGFLADAKRVFDKM-LERD 1326
            +AC H G +D G ++ D      G    +     + D+  + G L +A+++   M ++ +
Sbjct: 458  TACTHAGLVDKGLRYFDVMDRTYGIVPKVEHYGCVVDLLSRAGRLDEAEKLIISMPVKSN 517

Query: 1327 VVSWSIIICGSAMHGHAE 1380
            V+ W  ++ G  ++  AE
Sbjct: 518  VIVWGALLGGCRIYKDAE 535


>ref|XP_004295870.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like
            [Fragaria vesca subsp. vesca]
          Length = 729

 Score =  426 bits (1095), Expect = e-116
 Identities = 212/352 (60%), Positives = 265/352 (75%), Gaps = 1/352 (0%)
 Frame = +1

Query: 328  KLATLLLKCTAQLSMKQLLQVQAQIVTCAPPDLDDNLVAVKLIGVCSTHYKLNHAAFVFA 507
            KL  LLL+CT+ L+ + L Q+Q+ + T   P +D N++AVKLI   +      H + +F 
Sbjct: 90   KLTHLLLRCTSLLTTRHLFQIQSHLTTNPIPSIDPNILAVKLIAAFAHLANTRHLSLIFR 149

Query: 508  Q-LHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPCASNPDDYTFTSVLKACAGLLS 684
              L  PN+ A+NA+LKA AQN+ W  T+ YFN  L SP A  PD+YTFTSVLKACAGLL 
Sbjct: 150  HFLETPNIFAYNALLKAFAQNNDWHHTILYFNSQLLSPNAPTPDEYTFTSVLKACAGLLR 209

Query: 685  VIDGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFGYPTIAQQLFDEMTVRDVVSWNILVSG 864
            V +GGKVH  V K G + NL+VRNSL DMYFKFG   +AQ+LFDEM VRDVVSWN LV+G
Sbjct: 210  VTEGGKVHCLVTKFGCEENLFVRNSLTDMYFKFGKVGVAQKLFDEMRVRDVVSWNTLVAG 269

Query: 865  YASYGDVESAKVVFDRMVERNFVTWSTMIAGFARSGNLDAARKLFDEMTERNVVCWNAMI 1044
            Y   G+V  A+ VFD MVE++  +WSTMI+ +A+ G L+ A++LFD + +RNVV WNAMI
Sbjct: 270  YCVSGEVGEARRVFDGMVEKSSFSWSTMISAYAKLGELEEAQRLFDAVPQRNVVSWNAMI 329

Query: 1045 AGYVQNERYSDAVNLFRQMQQVGGLRPSDVTLVSVLSACAHLGALDLGKWVDRFITRSGT 1224
            AGY QNE+Y +AV LFR+MQ+  GL P+DVTLVSVLSACAHLGALDLGKW+DRFI RSG 
Sbjct: 330  AGYAQNEKYDEAVGLFREMQEC-GLAPNDVTLVSVLSACAHLGALDLGKWIDRFIKRSGM 388

Query: 1225 ELNLFLGNALADMFVKCGFLADAKRVFDKMLERDVVSWSIIICGSAMHGHAE 1380
            +L LFLGNALADM+ KCG + +A+RVF+ M ERDV+SWSIII G AM+GHA+
Sbjct: 389  DLGLFLGNALADMYAKCGCITEARRVFNNMQERDVISWSIIITGLAMNGHAD 440



 Score =  112 bits (279), Expect = 5e-22
 Identities = 80/296 (27%), Positives = 147/296 (49%), Gaps = 12/296 (4%)
 Frame = +1

Query: 478  KLNHAAFVFAQLHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPCASNPDDYTFTSV 657
            +L  A  +F  +   N+++WNA++  +AQN K+ E +  F  +    C   P+D T  SV
Sbjct: 306  ELEEAQRLFDAVPQRNVVSWNAMIAGYAQNEKYDEAVGLFREM--QECGLAPNDVTLVSV 363

Query: 658  LKACAGLLSVIDGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFGYPTIAQQLFDEMTVRDV 837
            L ACA L ++  G  +  ++ ++G    L++ N+L DMY K G  T A+++F+ M  RDV
Sbjct: 364  LSACAHLGALDLGKWIDRFIKRSGMDLGLFLGNALADMYAKCGCITEARRVFNNMQERDV 423

Query: 838  VSWNILVSGYASYGDVESAKVVFDRMVER----NFVTWSTMIAGFARSGNLDAARKLFDE 1005
            +SW+I+++G A  G  + A   FD+M+E     N +T+  ++     +G +D   + F+ 
Sbjct: 424  ISWSIIITGLAMNGHADQAFECFDKMIEHGLKPNEITFMGLLTACTHAGLVDKGLEYFNM 483

Query: 1006 MTER-----NVVCWNAMIAGYVQNERYSDAVNLFRQMQQVGGLRPSDVTLVSVLSACAHL 1170
            M +       +  +  ++    +  R + A ++   M     ++P+ +   ++L  C   
Sbjct: 484  MEKAFGISPKIEHYGCVVDLLSRASRLAKAEDMINSMP----MKPNVIVWGALLGGCRTY 539

Query: 1171 GALDLGKWVDRFITRSGTELN---LFLGNALADMFVKCGFLADAKRVFDKMLERDV 1329
               D G+ V R I    +E +   ++L N  A M    G L DA +   +M ++ V
Sbjct: 540  KDTDRGERVVRRILELDSEHSGSYIYLANLYASM----GRLDDAAQCRLRMRDKGV 591


>ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like
            [Cucumis sativus]
          Length = 632

 Score =  387 bits (995), Expect = e-105
 Identities = 199/352 (56%), Positives = 248/352 (70%), Gaps = 1/352 (0%)
 Frame = +1

Query: 325  RKLATLLLKCTAQLSMKQLLQVQAQIVTCAPPDLDDNLVAVKLIGVCSTHYKLNHAAFVF 504
            RK   LLL+C  QLSM+QL ++QAQI+    P +D N++AVK IGV S+H  L H+  +F
Sbjct: 22   RKTIHLLLRCATQLSMRQLFEIQAQIIASPIPSIDPNIIAVKFIGVSSSHGNLRHSVLIF 81

Query: 505  AQ-LHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPCASNPDDYTFTSVLKACAGLL 681
               L  PN+ A+NA+LKA +Q++ W  T+ YFN  L  P A NPD+YTFTSVLKACAGL 
Sbjct: 82   NHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLA 141

Query: 682  SVIDGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFGYPTIAQQLFDEMTVRDVVSWNILVS 861
             V++G KVH +V K G +SNL+VRNSLVD+YFK G   IAQ+LFDEM VRDVVSWN L+S
Sbjct: 142  QVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLIS 201

Query: 862  GYASYGDVESAKVVFDRMVERNFVTWSTMIAGFARSGNLDAARKLFDEMTERNVVCWNAM 1041
            GY   G V+ A++VFD M+E+N V+WSTMI+G+AR                         
Sbjct: 202  GYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYAR------------------------- 236

Query: 1042 IAGYVQNERYSDAVNLFRQMQQVGGLRPSDVTLVSVLSACAHLGALDLGKWVDRFITRSG 1221
                  NE+Y+DA+ LFRQMQ  GGL P+DVTLVSVLSACAHLGALDLGKW+ RFI R+ 
Sbjct: 237  ------NEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNK 290

Query: 1222 TELNLFLGNALADMFVKCGFLADAKRVFDKMLERDVVSWSIIICGSAMHGHA 1377
             E+ LFLGNALADM+ KCG + +AK VF +M ERDV+SWSIII G AM+G+A
Sbjct: 291  IEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYA 342



 Score = 97.8 bits (242), Expect = 1e-17
 Identities = 55/182 (30%), Positives = 97/182 (53%), Gaps = 4/182 (2%)
 Frame = +1

Query: 481  LNHAAFVFAQLHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPCASNPDDYTFTSVL 660
            ++ A  VF  +   NL++W+ ++  +A+N K+A+ +  F  +      + P+D T  SVL
Sbjct: 209  VDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLA-PNDVTLVSVL 267

Query: 661  KACAGLLSVIDGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFGYPTIAQQLFDEMTVRDVV 840
             ACA L ++  G  +H ++ +   +  L++ N+L DMY K G    A+ +F EM  RDV+
Sbjct: 268  SACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVI 327

Query: 841  SWNILVSGYASYGDVESAKVVFDRMV----ERNFVTWSTMIAGFARSGNLDAARKLFDEM 1008
            SW+I++ G A YG    A   F  M+    E N +++  ++     +G +D   + FD M
Sbjct: 328  SWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMM 387

Query: 1009 TE 1014
             +
Sbjct: 388  PQ 389


>ref|XP_002275535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
            chloroplastic-like [Vitis vinifera]
          Length = 513

 Score =  366 bits (939), Expect = 1e-98
 Identities = 181/351 (51%), Positives = 236/351 (67%)
 Frame = +1

Query: 328  KLATLLLKCTAQLSMKQLLQVQAQIVTCAPPDLDDNLVAVKLIGVCSTHYKLNHAAFVFA 507
            KL TLLL        KQLLQ+QAQ++T  P  L  NL+AVKLIG C+ +  L HA  +FA
Sbjct: 10   KLTTLLLNYAEHFQTKQLLQIQAQLITNPPLSLHPNLIAVKLIGACAANANLYHAQLIFA 69

Query: 508  QLHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPCASNPDDYTFTSVLKACAGLLSV 687
            QL NPN+ +WNAI+KAH     W   L  FN  LS P A NP++Y +TS++KACAGL ++
Sbjct: 70   QLPNPNVFSWNAIIKAHINCGAWEHALNCFNRQLSLPSAPNPNEYIYTSLIKACAGLEAI 129

Query: 688  IDGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFGYPTIAQQLFDEMTVRDVVSWNILVSGY 867
             DG KVHA V K+G  +N+++  SLVDMYFKF  P  A Q+FDEM +RDVVSWN +VSGY
Sbjct: 130  ADGLKVHAVVIKSGLDNNIHLGTSLVDMYFKFREPASAGQVFDEMPLRDVVSWNTMVSGY 189

Query: 868  ASYGDVESAKVVFDRMVERNFVTWSTMIAGFARSGNLDAARKLFDEMTERNVVCWNAMIA 1047
               GD+ESA+ VFD+M+ER+ ++W+ MI G+ ++G                         
Sbjct: 190  CLCGDLESARRVFDQMLERDVISWNAMIGGYVQNG------------------------- 224

Query: 1048 GYVQNERYSDAVNLFRQMQQVGGLRPSDVTLVSVLSACAHLGALDLGKWVDRFITRSGTE 1227
                  +YSDA+ +F +MQ+VGG+ P DVTLVSVLSACAH+GALD G+W+DRF+   G  
Sbjct: 225  ------KYSDAIEVFHEMQKVGGVVPDDVTLVSVLSACAHVGALDFGRWIDRFVGWRGRG 278

Query: 1228 LNLFLGNALADMFVKCGFLADAKRVFDKMLERDVVSWSIIICGSAMHGHAE 1380
            LNL+LGNAL DM+ KCG + +A+R+FD M ERDV+SWS +ICGS  HG A+
Sbjct: 279  LNLYLGNALIDMYAKCGTMEEARRIFDGMRERDVISWSTMICGSGTHGDAD 329



 Score =  102 bits (255), Expect = 3e-19
 Identities = 59/182 (32%), Positives = 102/182 (56%), Gaps = 4/182 (2%)
 Frame = +1

Query: 481  LNHAAFVFAQLHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPCASNPDDYTFTSVL 660
            L  A  VF Q+   ++I+WNA++  + QN K+++ +  F+  +       PDD T  SVL
Sbjct: 195  LESARRVFDQMLERDVISWNAMIGGYVQNGKYSDAIEVFH-EMQKVGGVVPDDVTLVSVL 253

Query: 661  KACAGLLSVIDGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFGYPTIAQQLFDEMTVRDVV 840
             ACA + ++  G  +  +V   G   NLY+ N+L+DMY K G    A+++FD M  RDV+
Sbjct: 254  SACAHVGALDFGRWIDRFVGWRGRGLNLYLGNALIDMYAKCGTMEEARRIFDGMRERDVI 313

Query: 841  SWNILVSGYASYGDVESAKVVFDRMVE----RNFVTWSTMIAGFARSGNLDAARKLFDEM 1008
            SW+ ++ G  ++GD + A   + +M+E     N VT+  +++  + +G +D   +LF  M
Sbjct: 314  SWSTMICGSGTHGDADEAFGYYSKMLECGVKPNEVTFMGLLSACSHAGLVDKGIELFSRM 373

Query: 1009 TE 1014
             +
Sbjct: 374  IQ 375


>ref|XP_004509956.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Cicer arietinum]
          Length = 603

 Score =  258 bits (660), Expect = 3e-66
 Identities = 149/381 (39%), Positives = 215/381 (56%), Gaps = 31/381 (8%)
 Frame = +1

Query: 328  KLATLLLKCTAQLSMKQLLQVQAQIVTCAPPDLDDNLVAVKLIGVCSTHYKLNHAAFVFA 507
            K  +LL  C    S + L Q+QAQIVT      D   VA   I  CS   ++ HA  +F 
Sbjct: 20   KFISLLRSCK---SCEHLHQIQAQIVTHGLEHND--FVAPSFITTCSRLRRMQHARKLFD 74

Query: 508  QLHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPCASNPDDYTFTSVLKACAGLLSV 687
            ++  PN   WNA+ + ++QN    + +  F C L+   A  P+ +TF  ++K+C    + 
Sbjct: 75   KIPEPNTATWNAMFRGYSQNEHHRDAVILF-CKLNRVSAV-PNCFTFPMIIKSCTKTKAF 132

Query: 688  IDGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFGYPTIAQQLFDEMTVRDVVSWNILVSGY 867
            I+G +VH   AK G++SN +V  +L+DMY   G    A ++F E+  R+VV W  ++S Y
Sbjct: 133  IEGEEVHCCAAKRGFKSNSFVATTLIDMYSTKGCVENAYKVFGEIRERNVVVWTAIISAY 192

Query: 868  ASYGDVESAKVVFDRMVERNFVTWSTMIAGF----------------------------- 960
             S GDV S K +FD   ER+ V WS +I+G+                             
Sbjct: 193  ISCGDVTSGKRLFDLAPERDVVMWSIVISGYIELKNMVAARELFNKMPNRDTMSWNAMLN 252

Query: 961  --ARSGNLDAARKLFDEMTERNVVCWNAMIAGYVQNERYSDAVNLFRQMQQVGGLRPSDV 1134
              A +G++D   KLFDEM E+NV  WN +I GYV+NE +SDA+  F +M   G + P+D 
Sbjct: 253  GYAANGDVDLFEKLFDEMPEKNVYSWNGLIGGYVKNELFSDALESFNRMLVEGHVVPNDF 312

Query: 1135 TLVSVLSACAHLGALDLGKWVDRFITRSGTELNLFLGNALADMFVKCGFLADAKRVFDKM 1314
            TLV+VLSAC+ LGALD+GKWV  +    G + NLF+GNAL DM+ KCG + +A  VF+ +
Sbjct: 313  TLVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNALIDMYAKCGVIENAVVVFNGL 372

Query: 1315 LERDVVSWSIIICGSAMHGHA 1377
              +D++SW+ II G A+HGHA
Sbjct: 373  DRKDIISWNTIINGLAVHGHA 393



 Score = 97.4 bits (241), Expect = 1e-17
 Identities = 63/230 (27%), Positives = 113/230 (49%), Gaps = 9/230 (3%)
 Frame = +1

Query: 499  VFAQLHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPCASNPDDYTFTSVLKACAGL 678
            +F ++   N+ +WN ++  + +N  +++ L  FN +L       P+D+T  +VL AC+ L
Sbjct: 266  LFDEMPEKNVYSWNGLIGGYVKNELFSDALESFNRMLVEGHVV-PNDFTLVAVLSACSRL 324

Query: 679  LSVIDGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFGYPTIAQQLFDEMTVRDVVSWNILV 858
             ++  G  VH Y    GY+ NL+V N+L+DMY K G    A  +F+ +  +D++SWN ++
Sbjct: 325  GALDMGKWVHVYAESIGYKGNLFVGNALIDMYAKCGVIENAVVVFNGLDRKDIISWNTII 384

Query: 859  SGYASYGDVESAKVVFDRM----VERNFVTWSTMIAGFARSGNLDAARKLFDEMTER--- 1017
            +G A +G    A  +FDRM     E + VT+  +++     G +      F  M +    
Sbjct: 385  NGLAVHGHAPDALSLFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSMVDHYKI 444

Query: 1018 --NVVCWNAMIAGYVQNERYSDAVNLFRQMQQVGGLRPSDVTLVSVLSAC 1161
               +  +  M+    +      AV+  R+M     + P  V   ++L AC
Sbjct: 445  VPQIEHYGCMVDLLGRAGLLDQAVSFIRKMP----MEPDAVIWAALLGAC 490



 Score = 83.6 bits (205), Expect = 2e-13
 Identities = 78/359 (21%), Positives = 147/359 (40%), Gaps = 42/359 (11%)
 Frame = +1

Query: 430  DNLVAVKLIGVCSTHYKLNHAAFVFAQLHNPNLIAWNAILKAHAQNHKWAETLRYFNCLL 609
            ++ VA  LI + ST   + +A  VF ++   N++ W AI+ A+          R F+   
Sbjct: 150  NSFVATTLIDMYSTKGCVENAYKVFGEIRERNVVVWTAIISAYISCGDVTSGKRLFDL-- 207

Query: 610  SSPCASNPDDYTFTSVLKACAGLLSVIDGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFGY 789
                A   D   ++ V+     L +++   ++   +      S     N++++ Y   G 
Sbjct: 208  ----APERDVVMWSIVISGYIELKNMVAARELFNKMPNRDTMS----WNAMLNGYAANGD 259

Query: 790  PTIAQQLFDEMTVRDVVSWNILVSGYASYGDVESAKVVFDRMV----------------- 918
              + ++LFDEM  ++V SWN L+ GY        A   F+RM+                 
Sbjct: 260  VDLFEKLFDEMPEKNVYSWNGLIGGYVKNELFSDALESFNRMLVEGHVVPNDFTLVAVLS 319

Query: 919  -----------------------ERNFVTWSTMIAGFARSGNLDAARKLFDEMTERNVVC 1029
                                   + N    + +I  +A+ G ++ A  +F+ +  ++++ 
Sbjct: 320  ACSRLGALDMGKWVHVYAESIGYKGNLFVGNALIDMYAKCGVIENAVVVFNGLDRKDIIS 379

Query: 1030 WNAMIAGYVQNERYSDAVNLFRQMQQVGGLRPSDVTLVSVLSACAHLGALDLG-KWVDRF 1206
            WN +I G   +    DA++LF +M+  G   P  VT V +LSAC H+G +  G  +    
Sbjct: 380  WNTIINGLAVHGHAPDALSLFDRMKSEGE-EPDGVTFVGILSACTHMGLVKDGFLYFKSM 438

Query: 1207 ITRSGTELNLFLGNALADMFVKCGFLADAKRVFDKM-LERDVVSWSIIICGSAMHGHAE 1380
            +        +     + D+  + G L  A     KM +E D V W+ ++    ++ + E
Sbjct: 439  VDHYKIVPQIEHYGCMVDLLGRAGLLDQAVSFIRKMPMEPDAVIWAALLGACRIYKNVE 497


>ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355522763|gb|AET03217.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 758

 Score =  257 bits (657), Expect = 7e-66
 Identities = 148/381 (38%), Positives = 214/381 (56%), Gaps = 31/381 (8%)
 Frame = +1

Query: 328  KLATLLLKCTAQLSMKQLLQVQAQIVTCAPPDLDDNLVAVKLIGVCSTHYKLNHAAFVFA 507
            K  TLL  C    + ++L Q+QAQIVT      D   VA   I  CS   +++HA  +F 
Sbjct: 14   KFITLLRSCK---NYERLHQIQAQIVTHGLEHND--FVAPNFITTCSRFKRIHHARKLFD 68

Query: 508  QLHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPCASNPDDYTFTSVLKACAGLLSV 687
            ++  PN   WNA+ + + QN    +T+  F  L  +  A  P+ +TF  ++K+C  L  V
Sbjct: 69   KIPQPNTATWNAMFRGYLQNGHHRDTVVLFGEL--NRIAGMPNCFTFPMIIKSCGKLEGV 126

Query: 688  IDGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFGYPTIAQQLFDEMTVRDVVSWNILVSGY 867
             +G +VH    K G++SN +V  SL+DMY K G    A ++F EM  R+VV W  +++GY
Sbjct: 127  REGEEVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGY 186

Query: 868  ASYGDVESAKVVFDRMVERNFVTWSTMIAGFARSGNLDAAR------------------- 990
               GDV S + +FD   ER+ V WS +I+G+  S N+ AAR                   
Sbjct: 187  ILCGDVVSGRRLFDLAPERDVVMWSVLISGYIESKNMAAARELFDKMPNRDTMSWNAMLN 246

Query: 991  ------------KLFDEMTERNVVCWNAMIAGYVQNERYSDAVNLFRQMQQVGGLRPSDV 1134
                        K+FDEM ERNV  WN +I GYV+N  +S+ +  F++M   G + P+D 
Sbjct: 247  GYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDF 306

Query: 1135 TLVSVLSACAHLGALDLGKWVDRFITRSGTELNLFLGNALADMFVKCGFLADAKRVFDKM 1314
            TLV+VLSAC+ LGALD+GKWV  +    G + NLF+GN L DM+ KCG + +A  VF+ +
Sbjct: 307  TLVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCL 366

Query: 1315 LERDVVSWSIIICGSAMHGHA 1377
              +D++SW+ II G A+HGHA
Sbjct: 367  DRKDIISWNTIINGLAIHGHA 387



 Score = 97.1 bits (240), Expect = 2e-17
 Identities = 65/230 (28%), Positives = 112/230 (48%), Gaps = 9/230 (3%)
 Frame = +1

Query: 499  VFAQLHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPCASNPDDYTFTSVLKACAGL 678
            VF ++   N+ +WN ++  + +N  ++ETL  F  +L       P+D+T  +VL AC+ L
Sbjct: 260  VFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVI-PNDFTLVAVLSACSRL 318

Query: 679  LSVIDGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFGYPTIAQQLFDEMTVRDVVSWNILV 858
             ++  G  VH Y    GY+ NL+V N L+DMY K G    A  +F+ +  +D++SWN ++
Sbjct: 319  GALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNTII 378

Query: 859  SGYASYGDVESAKVVFDRM----VERNFVTWSTMIAGFARSGNLDAARKLFDEMTER--- 1017
            +G A +G    A  +FDRM     E + VT+  +++     G +      F  M +    
Sbjct: 379  NGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSMVDHYSI 438

Query: 1018 --NVVCWNAMIAGYVQNERYSDAVNLFRQMQQVGGLRPSDVTLVSVLSAC 1161
               +  +  M+    +      A+N  R+M     + P  V   ++L AC
Sbjct: 439  VPQIEHYGCMVDLLGRAGLLDQALNFIRKMP----IEPDAVIWAALLGAC 484



 Score = 78.2 bits (191), Expect = 8e-12
 Identities = 77/359 (21%), Positives = 141/359 (39%), Gaps = 42/359 (11%)
 Frame = +1

Query: 430  DNLVAVKLIGVCSTHYKLNHAAFVFAQLHNPNLIAWNAILKAHAQNHKWAETLRYFNCLL 609
            ++ VA  LI + S    +  A  VF ++H  N++ W AI+  +          R F+   
Sbjct: 144  NSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILCGDVVSGRRLFDL-- 201

Query: 610  SSPCASNPDDYTFTSVLKACAGLLSVIDGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFGY 789
                 +   D    SVL   +G +   +         K   +  +   N++++ Y   G 
Sbjct: 202  -----APERDVVMWSVL--ISGYIESKNMAAARELFDKMPNRDTMSW-NAMLNGYAVNGE 253

Query: 790  PTIAQQLFDEMTVRDVVSWNILVSGYASYGDVESAKVVFDRMV----------------- 918
              + +++FDEM  R+V SWN L+ GY   G        F RM+                 
Sbjct: 254  VEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLS 313

Query: 919  -----------------------ERNFVTWSTMIAGFARSGNLDAARKLFDEMTERNVVC 1029
                                   + N    + +I  +A+ G ++ A  +F+ +  ++++ 
Sbjct: 314  ACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIIS 373

Query: 1030 WNAMIAGYVQNERYSDAVNLFRQMQQVGGLRPSDVTLVSVLSACAHLGALDLG-KWVDRF 1206
            WN +I G   +    DA+ +F +M+  G   P  VT V +LSAC H+G +  G  +    
Sbjct: 374  WNTIINGLAIHGHAPDALGMFDRMKSEGE-EPDGVTFVGILSACTHMGLVKDGFLYFKSM 432

Query: 1207 ITRSGTELNLFLGNALADMFVKCGFLADAKRVFDKM-LERDVVSWSIIICGSAMHGHAE 1380
            +        +     + D+  + G L  A     KM +E D V W+ ++    ++ + E
Sbjct: 433  VDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWAALLGACRLYKNVE 491


>ref|XP_004292199.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06145-like
            [Fragaria vesca subsp. vesca]
          Length = 532

 Score =  252 bits (644), Expect = 2e-64
 Identities = 132/323 (40%), Positives = 207/323 (64%), Gaps = 4/323 (1%)
 Frame = +1

Query: 424  LDDNLVAVKLIGVCSTHYKLNHAAFVFAQLHNPNLIAWNAILKAHAQ-NHKWAETLRYFN 600
            + D+    +LI   S+  +LNHAA  F+ + NPN   +NA++KA     H +   L + N
Sbjct: 7    IQDSFFTNQLITASSSLSRLNHAALAFSHIQNPNAFVYNAMIKASVHCGHPFQGLLCFIN 66

Query: 601  CLLSSPCASNPDDYTFTSVLKACAGLLSVIDGGKVHAYVAKTGYQSNLYVRNSLVDMYFK 780
             L +      P  YT+ S++KACA +  +  G  VH  V KTG+ S++YV+ +L+D+Y K
Sbjct: 67   MLRNRVF---PTSYTYPSLIKACASVSVMGFGEGVHGRVWKTGFDSHVYVQTALIDLYSK 123

Query: 781  FGYPTIAQQLFDEMTVRDVVSWNILVSGYASYGDVESAKVVFDRMVER---NFVTWSTMI 951
             G    A+++FDEM  RD  +W  +V+ +   GD+ SA+V+FD M+ER   N  TW+TMI
Sbjct: 124  LGRVGDARKVFDEMPDRDGFAWTTMVASHVRVGDMSSARVLFDEMLERCIANAATWNTMI 183

Query: 952  AGFARSGNLDAARKLFDEMTERNVVCWNAMIAGYVQNERYSDAVNLFRQMQQVGGLRPSD 1131
             G+AR G++++A  LFD+M  R+++ W AMI  Y QN+R+ +A+ +F +M+ + G+ P  
Sbjct: 184  DGYARLGDVESAGMLFDQMPARDLISWTAMINCYCQNKRFGEALAVFDEMR-INGVSPDA 242

Query: 1132 VTLVSVLSACAHLGALDLGKWVDRFITRSGTELNLFLGNALADMFVKCGFLADAKRVFDK 1311
            VT+ +V+SACAHLGALDLGK +  ++ R+G +L++++G+AL DM+ KCG L  A  VF  
Sbjct: 243  VTMSTVVSACAHLGALDLGKEIHYYVMRNGFDLDVYIGSALIDMYAKCGALDRALVVFFN 302

Query: 1312 MLERDVVSWSIIICGSAMHGHAE 1380
            + E+++  W+ +I G A HG AE
Sbjct: 303  LREKNLFCWNSVIEGLAAHGDAE 325



 Score =  105 bits (262), Expect = 5e-20
 Identities = 65/243 (26%), Positives = 128/243 (52%), Gaps = 9/243 (3%)
 Frame = +1

Query: 490  AAFVFAQLHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPCASNPDDYTFTSVLKAC 669
            A  +F Q+   +LI+W A++  + QN ++ E L  F+ +  +    +PD  T ++V+ AC
Sbjct: 195  AGMLFDQMPARDLISWTAMINCYCQNKRFGEALAVFDEMRIN--GVSPDAVTMSTVVSAC 252

Query: 670  AGLLSVIDGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFGYPTIAQQLFDEMTVRDVVSWN 849
            A L ++  G ++H YV + G+  ++Y+ ++L+DMY K G    A  +F  +  +++  WN
Sbjct: 253  AHLGALDLGKEIHYYVMRNGFDLDVYIGSALIDMYAKCGALDRALVVFFNLREKNLFCWN 312

Query: 850  ILVSGYASYGDVESAKVVFDRM----VERNFVTWSTMIAGFARSGNLDAARKLFDEMTER 1017
             ++ G A++GD E A  +F +M    ++ N VT+ ++++    +G ++  R+ F  MT+ 
Sbjct: 313  SVIEGLAAHGDAEKALAMFSKMAREKIKPNGVTFVSVLSACTHAGLVEEGRRRFSSMTQD 372

Query: 1018 NVVC-----WNAMIAGYVQNERYSDAVNLFRQMQQVGGLRPSDVTLVSVLSACAHLGALD 1182
              +      +  M+    +     DA+ L R M+    L+P+ V   ++L  C     L+
Sbjct: 373  YSISPGAEHYGCMVDLLSRAGLLDDALELIRSMK----LKPNSVIWGALLGGCKLHKNLE 428

Query: 1183 LGK 1191
            + K
Sbjct: 429  IAK 431


>ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Vitis vinifera]
          Length = 623

 Score =  247 bits (630), Expect = 1e-62
 Identities = 137/378 (36%), Positives = 217/378 (57%), Gaps = 31/378 (8%)
 Frame = +1

Query: 328  KLATLLLKCTAQLSMKQLLQVQAQIVTCAPPDLDDNLVAVKLIGVCSTHYKLNHAAFVFA 507
            +  +LL  C      KQ+ Q+QAQI+  A     +  +  KL+ +C+T  ++ +A  +F 
Sbjct: 40   RFISLLQSCKTS---KQVHQIQAQII--ANGFQYNEYITPKLVTICATLKRMTYARQLFD 94

Query: 508  QLHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPCASNPDDYTFTSVLKACAGLLSV 687
            Q+ +PN+  WN++ + +AQ+  + E +  F  +        P+ +TF  VLK+C  + ++
Sbjct: 95   QIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDI--RPNCFTFPVVLKSCGKINAL 152

Query: 688  IDGGKVHAYVAKTGYQSNLYVRNSLVDMY---------FKF-----------------GY 789
            I+G +VH ++ K G++ N +V  +L+DMY         +K                  GY
Sbjct: 153  IEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGY 212

Query: 790  -----PTIAQQLFDEMTVRDVVSWNILVSGYASYGDVESAKVVFDRMVERNFVTWSTMIA 954
                    A++LFD    RDVV WNI+VSGY   GD+  A+ +F  M  R+ + W+T++ 
Sbjct: 213  ILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPNRDVMFWNTVLK 272

Query: 955  GFARSGNLDAARKLFDEMTERNVVCWNAMIAGYVQNERYSDAVNLFRQMQQVGGLRPSDV 1134
            G+A +GN++A   LF+EM ERN+  WNA+I GY  N  + + +  F++M     + P+D 
Sbjct: 273  GYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDA 332

Query: 1135 TLVSVLSACAHLGALDLGKWVDRFITRSGTELNLFLGNALADMFVKCGFLADAKRVFDKM 1314
            TLV+VLSACA LGALDLGKWV  +   SG + N+++GNAL DM+ KCG + +A  VF  M
Sbjct: 333  TLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGM 392

Query: 1315 LERDVVSWSIIICGSAMH 1368
              +D++SW+ +I G AMH
Sbjct: 393  DTKDLISWNTLIGGLAMH 410



 Score = 86.7 bits (213), Expect = 2e-14
 Identities = 49/139 (35%), Positives = 76/139 (54%)
 Frame = +1

Query: 499 VFAQLHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPCASNPDDYTFTSVLKACAGL 678
           +F ++   N+ +WNA++  +A N  + E L  F  +LS      P+D T  +VL ACA L
Sbjct: 286 LFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVP-PNDATLVTVLSACARL 344

Query: 679 LSVIDGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFGYPTIAQQLFDEMTVRDVVSWNILV 858
            ++  G  VH Y   +G + N+YV N+L+DMY K G    A  +F  M  +D++SWN L+
Sbjct: 345 GALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLI 404

Query: 859 SGYASYGDVESAKVVFDRM 915
            G A +     A  +F +M
Sbjct: 405 GGLAMHSRGADALNLFFQM 423



 Score = 81.3 bits (199), Expect = 1e-12
 Identities = 81/362 (22%), Positives = 142/362 (39%), Gaps = 48/362 (13%)
 Frame = +1

Query: 439  VAVKLIGVCSTHYKLNHAAFVFAQLHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSP 618
            V   LI + S    +  A  +F ++   N++AW +++  +  +       R F+      
Sbjct: 173  VGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLFDL----- 227

Query: 619  CASNPDDYTFTSVLKACAGLLSVIDGGKVHAYVAKTGYQSNLYVR--NSLVDMYFKFGYP 792
              +   D    +++ +       I+GG +           N  V   N+++  Y   G  
Sbjct: 228  --APERDVVLWNIMVS-----GYIEGGDMVEARKLFHEMPNRDVMFWNTVLKGYATNGNV 280

Query: 793  TIAQQLFDEMTVRDVVSWNILVSGYASYGDVESAKVVFDRMVER-----NFVTWSTMIAG 957
               + LF+EM  R++ SWN L+ GYA  G        F RM+       N  T  T+++ 
Sbjct: 281  EALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSA 340

Query: 958  FARSGNLDAAR-----------------------------------KLFDEMTERNVVCW 1032
             AR G LD  +                                    +F  M  ++++ W
Sbjct: 341  CARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISW 400

Query: 1033 NAMIAGYVQNERYSDAVNLFRQMQQVGGLRPSDVTLVSVLSACAHLGALDLG-----KWV 1197
            N +I G   + R +DA+NLF QM+   G +P  +T + +L AC H+G ++ G        
Sbjct: 401  NTLIGGLAMHSRGADALNLFFQMKN-AGQKPDGITFIGILCACTHMGLVEDGFAYFQSMA 459

Query: 1198 DRFITRSGTELNLFLGNALADMFVKCGFLADAKRVFDKM-LERDVVSWSIIICGSAMHGH 1374
            D ++     E        + DM  + G L  A     KM +E D V W+ ++    ++ +
Sbjct: 460  DDYLIMPQIEHY----GCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAGLLGACRIYKN 515

Query: 1375 AE 1380
             E
Sbjct: 516  VE 517


>emb|CBI16398.3| unnamed protein product [Vitis vinifera]
          Length = 608

 Score =  246 bits (629), Expect = 1e-62
 Identities = 132/349 (37%), Positives = 212/349 (60%), Gaps = 2/349 (0%)
 Frame = +1

Query: 337  TLLLKCTAQLSMKQLLQVQAQIVTCAPPDLDDNLVAVKLIGVC--STHYKLNHAAFVFAQ 510
            +LL KC    S+ QL Q+Q+Q+V      ++D   + +LI  C  S    L++   +   
Sbjct: 55   SLLEKCK---SISQLKQIQSQMVLTGL--IEDGFASSRLIAFCAISEWRDLDYCTNILFN 109

Query: 511  LHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPCASNPDDYTFTSVLKACAGLLSVI 690
              NPN  +WN  ++    +    E +  +  +L     + PD+YT+  + KACA L  + 
Sbjct: 110  TRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCD-GTKPDNYTYPLLFKACARLSLIR 168

Query: 691  DGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFGYPTIAQQLFDEMTVRDVVSWNILVSGYA 870
             G ++  +V   G+ S+++V N+++ +    G    A+++FD+  VRD+VSWN +++GY 
Sbjct: 169  MGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYC 228

Query: 871  SYGDVESAKVVFDRMVERNFVTWSTMIAGFARSGNLDAARKLFDEMTERNVVCWNAMIAG 1050
              G++ESA+ +FD M  +  V+W+TM+ G+A+SG LD A KLFDEM +++VV WNAMI G
Sbjct: 229  --GNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGG 286

Query: 1051 YVQNERYSDAVNLFRQMQQVGGLRPSDVTLVSVLSACAHLGALDLGKWVDRFITRSGTEL 1230
            YV   R  +A+ LF +MQ +  + P +VT+VS LSAC+ LGALD+G W+  +I +    L
Sbjct: 287  YVHANRGKEALALFNEMQAMN-INPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSL 345

Query: 1231 NLFLGNALADMFVKCGFLADAKRVFDKMLERDVVSWSIIICGSAMHGHA 1377
            N+ LG AL DM+ KCG +  A +VF ++  R+ ++W+ II G A+HG+A
Sbjct: 346  NVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNA 394



 Score = 89.0 bits (219), Expect = 5e-15
 Identities = 51/183 (27%), Positives = 97/183 (53%), Gaps = 4/183 (2%)
 Frame = +1

Query: 481  LNHAAFVFAQLHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPCASNPDDYTFTSVL 660
            L+ A  +F ++ + +++ WNA++  +   ++  E L  FN + +     NPD+ T  S L
Sbjct: 262  LDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNI--NPDEVTMVSCL 319

Query: 661  KACAGLLSVIDGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFGYPTIAQQLFDEMTVRDVV 840
             AC+ L ++  G  +H Y+ K     N+ +  +L+DMY K G  T A Q+F E+  R+ +
Sbjct: 320  SACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSL 379

Query: 841  SWNILVSGYASYGDVESAKVVFDRMVERNF----VTWSTMIAGFARSGNLDAARKLFDEM 1008
            +W  ++SG A +G+   A   F  M++ +     VT+  +++     G ++  RK F +M
Sbjct: 380  TWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQM 439

Query: 1009 TER 1017
            + +
Sbjct: 440  SSK 442


>ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18840-like
            [Vitis vinifera]
          Length = 536

 Score =  246 bits (629), Expect = 1e-62
 Identities = 134/341 (39%), Positives = 200/341 (58%), Gaps = 3/341 (0%)
 Frame = +1

Query: 367  SMKQLLQVQAQIVTCAPPDLDDNLVAVKLIGVCSTH---YKLNHAAFVFAQLHNPNLIAW 537
            S+ +L Q  A I+      +     A +LI   ST+     + +A  +F+++ NPN   W
Sbjct: 19   SISELHQAHAHILKSGL--IHSTFAASRLIASVSTNSHAQAIPYAHSIFSRIPNPNSYMW 76

Query: 538  NAILKAHAQNHKWAETLRYFNCLLSSPCASNPDDYTFTSVLKACAGLLSVIDGGKVHAYV 717
            N I++A+A +      L  F+ +L +     PD YTFT  LK+C     V +G ++H +V
Sbjct: 77   NTIIRAYANSPTPEAALTIFHQMLHASVL--PDKYTFTFALKSCGSFSGVEEGRQIHGHV 134

Query: 718  AKTGYQSNLYVRNSLVDMYFKFGYPTIAQQLFDEMTVRDVVSWNILVSGYASYGDVESAK 897
             KTG   +L+++N+L+ +Y   G    A+ L D M  RDVVSWN L+S YA  G +E A 
Sbjct: 135  LKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGLMELAC 194

Query: 898  VVFDRMVERNFVTWSTMIAGFARSGNLDAARKLFDEMTERNVVCWNAMIAGYVQNERYSD 1077
             +FD M ERN  +W+ MI+G+   G L+ AR++F E   +NVV WNAMI GY    R+S+
Sbjct: 195  HLFDEMTERNVESWNFMISGYVGVGLLEEARRVFGETPVKNVVSWNAMITGYSHAGRFSE 254

Query: 1078 AVNLFRQMQQVGGLRPSDVTLVSVLSACAHLGALDLGKWVDRFITRSGTELNLFLGNALA 1257
             + LF  MQ   G++P + TLVSVLSACAH+GAL  G+WV  +I ++G  ++ F+  AL 
Sbjct: 255  VLVLFEDMQH-AGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALV 313

Query: 1258 DMFVKCGFLADAKRVFDKMLERDVVSWSIIICGSAMHGHAE 1380
            DM+ KCG +  A  VF+  L +D+ +W+ II G + HG  +
Sbjct: 314  DMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQ 354



 Score =  108 bits (271), Expect = 4e-21
 Identities = 80/293 (27%), Positives = 147/293 (50%), Gaps = 10/293 (3%)
 Frame = +1

Query: 481  LNHAAFVFAQLHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPCASNPDDYTFTSVL 660
            L  A  VF +    N+++WNA++  ++   +++E L  F  +  +     PD+ T  SVL
Sbjct: 221  LEEARRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHA--GVKPDNCTLVSVL 278

Query: 661  KACAGLLSVIDGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFGYPTIAQQLFDEMTVRDVV 840
             ACA + ++  G  VHAY+ K G   + +V  +LVDMY K G    A ++F+    +D+ 
Sbjct: 279  SACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDIS 338

Query: 841  SWNILVSGYASYGDVESAKVVFDRMVERNF----VTWSTMIAGFARSGNLDAARKLFDEM 1008
            +WN ++SG +++G  + A  +F  M+   F    VT+  +++  +R+G LD  R++F+ M
Sbjct: 339  TWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLM 398

Query: 1009 T-----ERNVVCWNAMIAGYVQNERYSDAVNLFRQMQQVGGLRPSDVTLVSVLSACAHLG 1173
                  +  +  +  M+    +     +A  L ++M Q    + + V   S+L AC + G
Sbjct: 399  VHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQ----KEASVVWESLLGACRNHG 454

Query: 1174 ALDLGKWV-DRFITRSGTELNLFLGNALADMFVKCGFLADAKRVFDKMLERDV 1329
             ++L + V  + +  S  E + F+   L++M+   G   D   V  KM  + V
Sbjct: 455  NVELAERVAQKLLELSPQESSSFV--QLSNMYASMGRWKDVMEVRQKMRAQGV 505


>emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
          Length = 686

 Score =  246 bits (628), Expect = 2e-62
 Identities = 134/363 (36%), Positives = 212/363 (58%), Gaps = 31/363 (8%)
 Frame = +1

Query: 373  KQLLQVQAQIVTCAPPDLDDNLVAVKLIGVCSTHYKLNHAAFVFAQLHNPNLIAWNAILK 552
            KQ+ Q+QAQI+  A     +  +  KL+ +C+T  ++ +A  +F Q+ +PN+  WN++ +
Sbjct: 115  KQVHQIQAQII--ANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFR 172

Query: 553  AHAQNHKWAETLRYFNCLLSSPCASNPDDYTFTSVLKACAGLLSVIDGGKVHAYVAKTGY 732
             +AQ+  + E +  F  +        P+ +TF  VLK+C  + ++I+G +VH ++ K G+
Sbjct: 173  GYAQSESYREVVFLFFQMKGMDI--RPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGF 230

Query: 733  QSNLYVRNSLVDMY---------FKF-----------------GY-----PTIAQQLFDE 819
            + N +V  +L+DMY         +K                  GY        A++LFD 
Sbjct: 231  RGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLFDL 290

Query: 820  MTVRDVVSWNILVSGYASYGDVESAKVVFDRMVERNFVTWSTMIAGFARSGNLDAARKLF 999
               RDVV WNI+VSGY   GD+  A+ +F  M  R+ + W+T++ G+A +GN++A   LF
Sbjct: 291  APERDVVLWNIMVSGYIEGGDMVEARKLFXEMPNRDVMFWNTVLKGYATNGNVEALEGLF 350

Query: 1000 DEMTERNVVCWNAMIAGYVQNERYSDAVNLFRQMQQVGGLRPSDVTLVSVLSACAHLGAL 1179
            +EM ERN+  WNA+I GY  N  + + +  F++M     + P+D TLV+VLSACA LGAL
Sbjct: 351  EEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGAL 410

Query: 1180 DLGKWVDRFITRSGTELNLFLGNALADMFVKCGFLADAKRVFDKMLERDVVSWSIIICGS 1359
            DLGKWV  +   SG + N+++GNAL DM+ KCG + +A  VF  M  +D++SW+ +I G 
Sbjct: 411  DLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGL 470

Query: 1360 AMH 1368
            AMH
Sbjct: 471  AMH 473



 Score = 86.7 bits (213), Expect = 2e-14
 Identities = 49/139 (35%), Positives = 76/139 (54%)
 Frame = +1

Query: 499 VFAQLHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPCASNPDDYTFTSVLKACAGL 678
           +F ++   N+ +WNA++  +A N  + E L  F  +LS      P+D T  +VL ACA L
Sbjct: 349 LFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVP-PNDATLVTVLSACARL 407

Query: 679 LSVIDGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFGYPTIAQQLFDEMTVRDVVSWNILV 858
            ++  G  VH Y   +G + N+YV N+L+DMY K G    A  +F  M  +D++SWN L+
Sbjct: 408 GALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLI 467

Query: 859 SGYASYGDVESAKVVFDRM 915
            G A +     A  +F +M
Sbjct: 468 GGLAMHSRGADALNLFFQM 486



 Score = 81.6 bits (200), Expect = 7e-13
 Identities = 81/362 (22%), Positives = 142/362 (39%), Gaps = 48/362 (13%)
 Frame = +1

Query: 439  VAVKLIGVCSTHYKLNHAAFVFAQLHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSP 618
            V   LI + S    +  A  +F ++   N++AW +++  +  +       R F+      
Sbjct: 236  VGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLFDL----- 290

Query: 619  CASNPDDYTFTSVLKACAGLLSVIDGGKVHAYVAKTGYQSNLYVR--NSLVDMYFKFGYP 792
              +   D    +++ +       I+GG +           N  V   N+++  Y   G  
Sbjct: 291  --APERDVVLWNIMVS-----GYIEGGDMVEARKLFXEMPNRDVMFWNTVLKGYATNGNV 343

Query: 793  TIAQQLFDEMTVRDVVSWNILVSGYASYGDVESAKVVFDRMVER-----NFVTWSTMIAG 957
               + LF+EM  R++ SWN L+ GYA  G        F RM+       N  T  T+++ 
Sbjct: 344  EALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSA 403

Query: 958  FARSGNLDAAR-----------------------------------KLFDEMTERNVVCW 1032
             AR G LD  +                                    +F  M  ++++ W
Sbjct: 404  CARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISW 463

Query: 1033 NAMIAGYVQNERYSDAVNLFRQMQQVGGLRPSDVTLVSVLSACAHLGALDLG-----KWV 1197
            N +I G   + R +DA+NLF QM+   G +P  +T + +L AC H+G ++ G        
Sbjct: 464  NTLIGGLAMHSRGADALNLFFQMKN-AGQKPDGITFIGILCACTHMGLVEDGFAYFQSMA 522

Query: 1198 DRFITRSGTELNLFLGNALADMFVKCGFLADAKRVFDKM-LERDVVSWSIIICGSAMHGH 1374
            D ++     E        + DM  + G L  A     KM +E D V W+ ++    ++ +
Sbjct: 523  DDYLIMPQIEHY----GCMVDMLARAGRLEQAXAFVRKMPVEADGVIWAGLLGACRIYKN 578

Query: 1375 AE 1380
             E
Sbjct: 579  VE 580


>ref|XP_004306131.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15300-like
            [Fragaria vesca subsp. vesca]
          Length = 540

 Score =  242 bits (617), Expect = 3e-61
 Identities = 141/361 (39%), Positives = 212/361 (58%), Gaps = 8/361 (2%)
 Frame = +1

Query: 322  RRKLATLLLKCTAQLSMKQLLQVQAQIVTC---APPDLDDNLVAVKLIGVCSTHYKLNHA 492
            R++ +TL  KCT   ++K L QV A +V     + P     L+    + +  T   + +A
Sbjct: 13   RQQRSTLFQKCT---NLKALKQVHASMVIHGFNSNPSALGELIFASAMSISGT---IGYA 66

Query: 493  AFVFAQLHNPNLIAWNAILKAHAQNHKWAETLRYFNCLL----SSPCASNPDDYTFTSVL 660
              VF Q+  PN   WN +++  AQ+      LR  N ++           PDD+TF  VL
Sbjct: 67   HKVFDQITEPNTFMWNTMIRGSAQS------LRPLNAVVLYTRMEKRGLRPDDFTFPFVL 120

Query: 661  KACAGLLSVIDGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFGYPTIAQQLFDEMTVRDVV 840
            KAC  L  V  G  +H  V + G++SN  VRN+L+D + K G   +A  LFD    RDVV
Sbjct: 121  KACNKLCWVRMGMGIHGKVVRFGFESNASVRNTLIDFHAKCGDLRVATALFDGSARRDVV 180

Query: 841  SWNILVSGYASYGDVESAKVVFDRMVERNFVTWSTMIAGFARSGNLDAARKLFDEMTERN 1020
            +W+ L +GYA  G +++A+ +FD M  ++ V+W+ MI G+ + G +++ARKLFDE+  R+
Sbjct: 181  AWSALTAGYARRGKLDAARRLFDEMPVKDLVSWNVMITGYTKQGEMESARKLFDEVPRRD 240

Query: 1021 VVCWNAMIAGYVQNERYSDAVNLFRQMQQVGGLRPSDVTLVSVLSACAHLGALDLGKWVD 1200
            VV WNAMIAGYV+      A+ +F +M  +G  +P +VT++S+LSACA +G L++GK + 
Sbjct: 241  VVTWNAMIAGYVRCGCVEQALQMFEEMTSLGE-KPDEVTMLSLLSACADVGELEIGKRLH 299

Query: 1201 RFITRSGT-ELNLFLGNALADMFVKCGFLADAKRVFDKMLERDVVSWSIIICGSAMHGHA 1377
              +   G+ E+++  GNAL DM+ KCG +  A  VF  M E+DV SW+ +I G A HGHA
Sbjct: 300  SSLLELGSGEISIIHGNALIDMYSKCGSIERALEVFWGMREKDVSSWNSVIGGLAFHGHA 359

Query: 1378 E 1380
            E
Sbjct: 360  E 360



 Score = 77.8 bits (190), Expect = 1e-11
 Identities = 58/248 (23%), Positives = 121/248 (48%), Gaps = 10/248 (4%)
 Frame = +1

Query: 478  KLNHAAFVFAQLHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPCASNPDDYTFTSV 657
            ++  A  +F ++   +++ WNA++  + +     + L+ F  + S      PD+ T  S+
Sbjct: 225  EMESARKLFDEVPRRDVVTWNAMIAGYVRCGCVEQALQMFEEMTS--LGEKPDEVTMLSL 282

Query: 658  LKACAGLLSVIDGGKVHAYVAKTGY-QSNLYVRNSLVDMYFKFGYPTIAQQLFDEMTVRD 834
            L ACA +  +  G ++H+ + + G  + ++   N+L+DMY K G    A ++F  M  +D
Sbjct: 283  LSACADVGELEIGKRLHSSLLELGSGEISIIHGNALIDMYSKCGSIERALEVFWGMREKD 342

Query: 835  VVSWNILVSGYASYGDVESAKVVFDRM----VERNFVTWSTMIAGFARSGNLDAARKLFD 1002
            V SWN ++ G A +G  E +  +F+ M    V  + +T+  ++   + +G ++  R  F 
Sbjct: 343  VSSWNSVIGGLAFHGHAEESVNLFEEMRRLKVRPDGITFVGVLVACSHAGKVEDGRGYFS 402

Query: 1003 EM-----TERNVVCWNAMIAGYVQNERYSDAVNLFRQMQQVGGLRPSDVTLVSVLSACAH 1167
             M      E N+  +  M+    +     +A +    M+    ++P+ +   ++L AC  
Sbjct: 403  LMRNKYKIEPNIKHYGCMVDLLGRAGLLDEAFDCIENME----MQPNAIVWRTLLGACKV 458

Query: 1168 LGALDLGK 1191
             G ++LG+
Sbjct: 459  HGNVELGR 466


>ref|XP_007200721.1| hypothetical protein PRUPE_ppa025321mg [Prunus persica]
            gi|462396121|gb|EMJ01920.1| hypothetical protein
            PRUPE_ppa025321mg [Prunus persica]
          Length = 529

 Score =  241 bits (616), Expect = 4e-61
 Identities = 121/318 (38%), Positives = 200/318 (62%), Gaps = 1/318 (0%)
 Frame = +1

Query: 430  DNLVAVKLIGVCSTHYKLNHAAFVFAQLHNPNLIAWNAILKAHAQ-NHKWAETLRYFNCL 606
            D+    +LI  CST  ++++A   F Q+ +PN+  +NA++K      H       Y N L
Sbjct: 9    DSFFMNQLITACSTLSRIDYAVLAFTQIESPNVFVYNAMIKGFVCCGHPCQALGCYINML 68

Query: 607  LSSPCASNPDDYTFTSVLKACAGLLSVIDGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFG 786
                    P  YTF+S++KAC  L ++  G  V  ++ K G+ S+++V+ SL+D Y K  
Sbjct: 69   RGMVL---PTSYTFSSLIKACTSLSALGVGEAVQGHIWKNGFGSHVFVQTSLIDFYSKLR 125

Query: 787  YPTIAQQLFDEMTVRDVVSWNILVSGYASYGDVESAKVVFDRMVERNFVTWSTMIAGFAR 966
              + ++++FDEM  RD  +W  +VS +   GD+ SA+++FD M ERN  TW+TMI G+AR
Sbjct: 126  RISESRKVFDEMPERDAFAWTTMVSSHVRVGDMSSARILFDEMEERNITTWNTMIDGYAR 185

Query: 967  SGNLDAARKLFDEMTERNVVCWNAMIAGYVQNERYSDAVNLFRQMQQVGGLRPSDVTLVS 1146
             GN+++A  LF+ M  R+++ W  MI  Y QN+++ +A+ +F  M ++ G+ P +VT+ +
Sbjct: 186  LGNVESAELLFNHMPTRDIISWTTMIDCYSQNKKFGEALAVFSDM-RMKGISPDEVTMAT 244

Query: 1147 VLSACAHLGALDLGKWVDRFITRSGTELNLFLGNALADMFVKCGFLADAKRVFDKMLERD 1326
            V+SACAHLGALDLGK +  +I ++G +L++++G+AL DM+ KCG L  +  VF K+ +++
Sbjct: 245  VISACAHLGALDLGKEIHLYILQNGFDLDVYIGSALIDMYAKCGALDRSLLVFFKLQDKN 304

Query: 1327 VVSWSIIICGSAMHGHAE 1380
            +  W+  I G A+HG A+
Sbjct: 305  LFCWNSAIEGLAVHGFAK 322



 Score = 93.2 bits (230), Expect = 2e-16
 Identities = 59/243 (24%), Positives = 121/243 (49%), Gaps = 9/243 (3%)
 Frame = +1

Query: 490  AAFVFAQLHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPCASNPDDYTFTSVLKAC 669
            A  +F  +   ++I+W  ++  ++QN K+ E L  F+ +       +PD+ T  +V+ AC
Sbjct: 192  AELLFNHMPTRDIISWTTMIDCYSQNKKFGEALAVFSDMRMK--GISPDEVTMATVISAC 249

Query: 670  AGLLSVIDGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFGYPTIAQQLFDEMTVRDVVSWN 849
            A L ++  G ++H Y+ + G+  ++Y+ ++L+DMY K G    +  +F ++  +++  WN
Sbjct: 250  AHLGALDLGKEIHLYILQNGFDLDVYIGSALIDMYAKCGALDRSLLVFFKLQDKNLFCWN 309

Query: 850  ILVSGYASYGDVESAKVVFDRM----VERNFVTWSTMIAGFARSGNLDAARKLFDEMTE- 1014
              + G A +G  + A  +F +M    +  N VT+ ++++    +G ++  R+ F  MT+ 
Sbjct: 310  SAIEGLAVHGFAKEALAMFSKMEREKINPNGVTFVSVLSSCTHAGLVEEGRRRFSSMTQD 369

Query: 1015 ----RNVVCWNAMIAGYVQNERYSDAVNLFRQMQQVGGLRPSDVTLVSVLSACAHLGALD 1182
                  V  +  M+    +     DA+ L R M+      P+ V   ++L  C     L+
Sbjct: 370  YSILPEVEHYGCMVDLLSKAGLLEDALELIRSMK----FEPNAVIWGALLGGCKLHRNLE 425

Query: 1183 LGK 1191
            + K
Sbjct: 426  IAK 428


>gb|EYU39274.1| hypothetical protein MIMGU_mgv1a004625mg [Mimulus guttatus]
          Length = 517

 Score =  241 bits (615), Expect = 6e-61
 Identities = 123/309 (39%), Positives = 198/309 (64%)
 Frame = +1

Query: 454  IGVCSTHYKLNHAAFVFAQLHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPCASNP 633
            I  CS  + L+ A F F+Q+HNPN+  +NAI+ A     +  E LRY+  +L +     P
Sbjct: 5    ITACSNVHSLDSAIFAFSQVHNPNVFVYNAIIGAFLNLFRPLEGLRYYVDMLRN--GVTP 62

Query: 634  DDYTFTSVLKACAGLLSVIDGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFGYPTIAQQLF 813
              YTF++++K+C  L  V  G  VH  V K G   +++V+ SLVD Y   G    ++++F
Sbjct: 63   TSYTFSALIKSCRVLSVVGFGETVHGQVLKNGLALHVHVQTSLVDFYSSLGRVIQSRKMF 122

Query: 814  DEMTVRDVVSWNILVSGYASYGDVESAKVVFDRMVERNFVTWSTMIAGFARSGNLDAARK 993
            DEMT RD  +W+ ++S YA  GD++SA+ VFD M E+N  +W+T+I G+  +GN+++A +
Sbjct: 123  DEMTDRDGFAWSSMISAYARAGDLDSARSVFDEMPEKNNASWNTIIHGYVEAGNVESAEE 182

Query: 994  LFDEMTERNVVCWNAMIAGYVQNERYSDAVNLFRQMQQVGGLRPSDVTLVSVLSACAHLG 1173
            LF  M +R+V+ W  MI  Y +++ Y +A+ LF +M++  G RP  VT+ +V+SACAHLG
Sbjct: 183  LFRIMPKRDVISWTTMINCYSKHKLYREALELFDEMKRT-GTRPDGVTMATVISACAHLG 241

Query: 1174 ALDLGKWVDRFITRSGTELNLFLGNALADMFVKCGFLADAKRVFDKMLERDVVSWSIIIC 1353
             LD GK +  ++ ++  ++++ +G+AL DM+ KCG L  A  VF K+ ++++  WS +I 
Sbjct: 242  VLDQGKEMHLYVMQNRFKIDVHIGSALIDMYAKCGVLERALVVFYKLEDKNLFCWSSVID 301

Query: 1354 GSAMHGHAE 1380
            G A+HG+AE
Sbjct: 302  GLAVHGYAE 310



 Score = 89.7 bits (221), Expect = 3e-15
 Identities = 67/287 (23%), Positives = 140/287 (48%), Gaps = 10/287 (3%)
 Frame = +1

Query: 499  VFAQLHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPCASNPDDYTFTSVLKACAGL 678
            +F  +   ++I+W  ++  ++++  + E L  F+ +  +   + PD  T  +V+ ACA L
Sbjct: 183  LFRIMPKRDVISWTTMINCYSKHKLYREALELFDEMKRT--GTRPDGVTMATVISACAHL 240

Query: 679  LSVIDGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFGYPTIAQQLFDEMTVRDVVSWNILV 858
              +  G ++H YV +  ++ ++++ ++L+DMY K G    A  +F ++  +++  W+ ++
Sbjct: 241  GVLDQGKEMHLYVMQNRFKIDVHIGSALIDMYAKCGVLERALVVFYKLEDKNLFCWSSVI 300

Query: 859  SGYASYGDVESAKVVFDRM----VERNFVTWSTMIAGFARSGNLDAARKLFDEMTER--- 1017
             G A +G  E A  +FD+M    +E N V + +++A    +G ++   + F EMT +   
Sbjct: 301  DGLAVHGYAEEALAMFDKMDKEKIEPNRVIFVSVLAACTHAGLVEEGNRRFLEMTSKYSI 360

Query: 1018 --NVVCWNAMIAGYVQNERYSDAVNLFRQMQQVGGLRPSDVTLVSVLSACAHLGALDLGK 1191
               +  +  M+    +     +A+ L R M+    ++P+ V   ++L  C     L++ +
Sbjct: 361  LPEIEHYGCMVDLLCRVGLIEEALVLIRSMR----MQPNSVIWGALLGGCKLHKNLEIAR 416

Query: 1192 -WVDRFITRSGTELNLFLGNALADMFVKCGFLADAKRVFDKMLERDV 1329
              VDR +         F    L +M+ +    AD  R+   M ER V
Sbjct: 417  VAVDRLMILETDSSGYF--TLLINMYAEANRWADVARIRATMKERGV 461


>gb|EYU25996.1| hypothetical protein MIMGU_mgv1a024459mg, partial [Mimulus guttatus]
          Length = 526

 Score =  240 bits (612), Expect = 1e-60
 Identities = 122/309 (39%), Positives = 198/309 (64%)
 Frame = +1

Query: 454  IGVCSTHYKLNHAAFVFAQLHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPCASNP 633
            I  CS  + L+ A F F+Q+HNPN+  +NAI+ A     +  E LRY+  +L +     P
Sbjct: 14   ITACSNVHSLDSAIFAFSQVHNPNVFVYNAIIGAFLNLFRPLEGLRYYVDMLRN--GLTP 71

Query: 634  DDYTFTSVLKACAGLLSVIDGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFGYPTIAQQLF 813
              YTF++++K+C  L  V  G  VH  V K G   +++V+ SLVD Y   G    ++++F
Sbjct: 72   TSYTFSALIKSCRVLSVVGFGETVHGQVLKNGLALHVHVQTSLVDFYSSLGKVIQSRKMF 131

Query: 814  DEMTVRDVVSWNILVSGYASYGDVESAKVVFDRMVERNFVTWSTMIAGFARSGNLDAARK 993
            DEMT RD  +W+ ++S YA  GD++SA+ VFD M E+N  +W+T+I G+  +GN+++A +
Sbjct: 132  DEMTERDGFAWSSMISAYARAGDLDSARSVFDEMPEKNNASWNTIIHGYVEAGNVESADE 191

Query: 994  LFDEMTERNVVCWNAMIAGYVQNERYSDAVNLFRQMQQVGGLRPSDVTLVSVLSACAHLG 1173
            LF  M +R+V+ W  MI  Y +++ Y +A+ LF +M++  G RP  VT+ +V+SACAHLG
Sbjct: 192  LFQIMPKRDVISWTTMINCYSKHKLYREALELFDEMKRT-GTRPDGVTMATVISACAHLG 250

Query: 1174 ALDLGKWVDRFITRSGTELNLFLGNALADMFVKCGFLADAKRVFDKMLERDVVSWSIIIC 1353
             L+ GK +  ++ ++  ++++ +G+AL DM+ KCG L  A  VF K+ ++++  WS +I 
Sbjct: 251  VLEQGKEMHLYVMQNRFKIDVHIGSALIDMYAKCGVLERALVVFYKLEDKNLFCWSSVID 310

Query: 1354 GSAMHGHAE 1380
            G A+HG+AE
Sbjct: 311  GLAVHGYAE 319



 Score = 92.0 bits (227), Expect = 5e-16
 Identities = 69/287 (24%), Positives = 140/287 (48%), Gaps = 10/287 (3%)
 Frame = +1

Query: 499  VFAQLHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPCASNPDDYTFTSVLKACAGL 678
            +F  +   ++I+W  ++  ++++  + E L  F+ +  +   + PD  T  +V+ ACA L
Sbjct: 192  LFQIMPKRDVISWTTMINCYSKHKLYREALELFDEMKRT--GTRPDGVTMATVISACAHL 249

Query: 679  LSVIDGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFGYPTIAQQLFDEMTVRDVVSWNILV 858
              +  G ++H YV +  ++ ++++ ++L+DMY K G    A  +F ++  +++  W+ ++
Sbjct: 250  GVLEQGKEMHLYVMQNRFKIDVHIGSALIDMYAKCGVLERALVVFYKLEDKNLFCWSSVI 309

Query: 859  SGYASYGDVESAKVVFDRM----VERNFVTWSTMIAGFARSGNLDAARKLFDEMTER--- 1017
             G A +G  E A  +FD+M    +E N V + +++A    +G ++   + F EMT +   
Sbjct: 310  DGLAVHGYAEEALAMFDKMDKEKIEPNRVIFVSVLAACTHAGLVEEGNRRFLEMTSKYSI 369

Query: 1018 --NVVCWNAMIAGYVQNERYSDAVNLFRQMQQVGGLRPSDVTLVSVLSACAHLGALDLGK 1191
               +  +  M+    +     +A+ L R M+    L+P+ V   ++L  C     LD+ +
Sbjct: 370  LPEIEHYGCMVDLLCRVGLIEEALVLIRSMR----LQPNSVIWGALLGGCKLHKNLDIAR 425

Query: 1192 -WVDRFITRSGTELNLFLGNALADMFVKCGFLADAKRVFDKMLERDV 1329
              VDR +         F    L +M+ +    AD  R+   M ER V
Sbjct: 426  VAVDRLMILETDSSGYF--TLLINMYAEANRWADVARIRAMMKERGV 470


>ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06145-like
            [Cucumis sativus]
          Length = 697

 Score =  240 bits (612), Expect = 1e-60
 Identities = 119/307 (38%), Positives = 195/307 (63%), Gaps = 2/307 (0%)
 Frame = +1

Query: 466  STHYKLNHAAFVFAQLHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPCASN--PDD 639
            S HY +    F F Q+ NPN+  +NA++K            R   C +     SN  P  
Sbjct: 183  SVHYPV----FAFTQMENPNVFVYNAMIKGFVY---CGYPFRALQCYVHMLEESNVLPTS 235

Query: 640  YTFTSVLKACAGLLSVIDGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFGYPTIAQQLFDE 819
            YTF+S++KAC  + +V  G  VH ++ K G++S+L+V+ +LVD Y K    + A+++FDE
Sbjct: 236  YTFSSLVKACTFMCAVELGQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDE 295

Query: 820  MTVRDVVSWNILVSGYASYGDVESAKVVFDRMVERNFVTWSTMIAGFARSGNLDAARKLF 999
            M  RD  +W  +VS  A  GD++SA+ +F+ M ERN  TW+TMI G+AR GN+++A  LF
Sbjct: 296  MCERDAFAWTAMVSALARVGDMDSARKLFEEMPERNTATWNTMIDGYARLGNVESAELLF 355

Query: 1000 DEMTERNVVCWNAMIAGYVQNERYSDAVNLFRQMQQVGGLRPSDVTLVSVLSACAHLGAL 1179
            ++M  ++++ W  MI  Y QN++Y DA+ ++ +M ++ G+ P +VT+ +V SACAH+GAL
Sbjct: 356  NQMPTKDIISWTTMITCYSQNKQYQDALAIYSEM-RLNGIIPDEVTMSTVASACAHIGAL 414

Query: 1180 DLGKWVDRFITRSGTELNLFLGNALADMFVKCGFLADAKRVFDKMLERDVVSWSIIICGS 1359
            +LGK +  ++   G  L++++G+AL DM+ KCG L  +  +F K+ ++++  W+ +I G 
Sbjct: 415  ELGKEIHHYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGL 474

Query: 1360 AMHGHAE 1380
            A+HG+AE
Sbjct: 475  AVHGYAE 481



 Score = 87.4 bits (215), Expect = 1e-14
 Identities = 56/243 (23%), Positives = 124/243 (51%), Gaps = 9/243 (3%)
 Frame = +1

Query: 490  AAFVFAQLHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPCASNPDDYTFTSVLKAC 669
            A  +F Q+   ++I+W  ++  ++QN ++ + L  ++ +  +     PD+ T ++V  AC
Sbjct: 351  AELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYSEMRLNGII--PDEVTMSTVASAC 408

Query: 670  AGLLSVIDGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFGYPTIAQQLFDEMTVRDVVSWN 849
            A + ++  G ++H YV   G   ++Y+ ++LVDMY K G   ++  +F ++T +++  WN
Sbjct: 409  AHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWN 468

Query: 850  ILVSGYASYGDVESAKVVFDRM----VERNFVTWSTMIAGFARSGNLDAARKLFDEMT-- 1011
             ++ G A +G  E A  +F  M    +  N VT+ ++++    +G +D  R  F  MT  
Sbjct: 469  AVIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRD 528

Query: 1012 ---ERNVVCWNAMIAGYVQNERYSDAVNLFRQMQQVGGLRPSDVTLVSVLSACAHLGALD 1182
                 ++  +  M+    ++   ++A+ L + M+      P+ +   ++L+ C   G  +
Sbjct: 529  YDIRPDIRHYGCMVDMLSKSGYLNEALELIKSME----FEPNSIIWGALLNGCKLHGNCE 584

Query: 1183 LGK 1191
            + +
Sbjct: 585  IAE 587


>ref|XP_004491829.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15300-like
            [Cicer arietinum]
          Length = 521

 Score =  239 bits (611), Expect = 2e-60
 Identities = 129/315 (40%), Positives = 193/315 (61%), Gaps = 2/315 (0%)
 Frame = +1

Query: 442  AVKLIGVCSTHYKLNHAAFVFAQLHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPC 621
            +  L+G  +T    N+A  +FAQ+  P+   +N +++  +Q+    + LR  +       
Sbjct: 46   STSLVGPTATPTVTNYAHQLFAQIPQPDTFMFNTMIRGSSQS---PDPLRAVSLYAQMHY 102

Query: 622  AS-NPDDYTFTSVLKACAGLLSVIDGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFGYPTI 798
             S  PD YTF  VLKAC  L+ V  G  VH    + G+ SN +VRN+L+  + K G   +
Sbjct: 103  RSLKPDSYTFPFVLKACTKLIWVNTGSAVHGLAVRFGFCSNTFVRNALLVFHAKCGDLKV 162

Query: 799  AQQLFDEMTVRDVVSWNILVSGYASYGDVESAKVVFDRMVERNFVTWSTMIAGFARSGNL 978
            A  +FD+    DVV+W+ L++GYA  GD++ A+ +FD M ER+ V+W+ MI G+A+ G +
Sbjct: 163  ATSIFDDSCKGDVVAWSSLIAGYAKRGDLKVARKLFDEMPERDLVSWNVMITGYAKQGEM 222

Query: 979  DAARKLFDEMTERNVVCWNAMIAGYVQNERYSDAVNLFRQMQQVGGLRPSDVTLVSVLSA 1158
            ++AR LFDE   ++VV WNA+IAGYV       A+ LF +M +VGG+ P +VTL+S+LSA
Sbjct: 223  ESARMLFDEAPVKDVVSWNAVIAGYVVCRLNRQALELFDEMSRVGGVYPDEVTLLSLLSA 282

Query: 1159 CAHLGALDLGKWVDRFITR-SGTELNLFLGNALADMFVKCGFLADAKRVFDKMLERDVVS 1335
            CA LG L+ G+ V   I   S  ++N  LGNAL DM+ KCG + +A  VF  + ++DV+S
Sbjct: 283  CAELGDLENGRKVHAEIMEISMGKVNTLLGNALVDMYAKCGNIEEAIHVFWSIRDKDVIS 342

Query: 1336 WSIIICGSAMHGHAE 1380
            W+ +I G A HGH E
Sbjct: 343  WNTVIVGLAFHGHGE 357



 Score = 98.6 bits (244), Expect = 6e-18
 Identities = 66/252 (26%), Positives = 118/252 (46%), Gaps = 43/252 (17%)
 Frame = +1

Query: 754  NSLVDMYFKFGYPTIAQQLFDEMTVRDVVSWNILVSGY---------------------- 867
            N ++  Y K G    A+ LFDE  V+DVVSWN +++GY                      
Sbjct: 210  NVMITGYAKQGEMESARMLFDEAPVKDVVSWNAVIAGYVVCRLNRQALELFDEMSRVGGV 269

Query: 868  --------------ASYGDVESAKVVFDRMVERNFVTWSTMIAG-----FARSGNLDAAR 990
                          A  GD+E+ + V   ++E +    +T++       +A+ GN++ A 
Sbjct: 270  YPDEVTLLSLLSACAELGDLENGRKVHAEIMEISMGKVNTLLGNALVDMYAKCGNIEEAI 329

Query: 991  KLFDEMTERNVVCWNAMIAGYVQNERYSDAVNLFRQMQQVGGLRPSDVTLVSVLSACAHL 1170
             +F  + +++V+ WN +I G   +    +++ LF++M +   + P+D+T V VL+AC+H 
Sbjct: 330  HVFWSIRDKDVISWNTVIVGLAFHGHGEESLGLFKEMLRT-KICPNDITFVGVLAACSHA 388

Query: 1171 GALDLG-KWVDRFITRSGTELNLFLGNALADMFVKCGFLADAKRVFDKM-LERDVVSWSI 1344
            G +D G ++ D   +    E N+     + DM  + G L  A    D M +E + + W  
Sbjct: 389  GKVDEGYRYFDLMRSEYKIEPNIRHCGCMVDMLGRAGLLNKAAEFIDSMKIEPNAIVWRT 448

Query: 1345 IICGSAMHGHAE 1380
            ++  S +HG  E
Sbjct: 449  LLGASKVHGDVE 460



 Score = 78.2 bits (191), Expect = 8e-12
 Identities = 52/182 (28%), Positives = 93/182 (51%), Gaps = 5/182 (2%)
 Frame = +1

Query: 478  KLNHAAFVFAQLHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPCASNPDDYTFTSV 657
            ++  A  +F +    ++++WNA++  +       + L  F+  +S      PD+ T  S+
Sbjct: 221  EMESARMLFDEAPVKDVVSWNAVIAGYVVCRLNRQALELFD-EMSRVGGVYPDEVTLLSL 279

Query: 658  LKACAGLLSVIDGGKVHAYVAKTGY-QSNLYVRNSLVDMYFKFGYPTIAQQLFDEMTVRD 834
            L ACA L  + +G KVHA + +    + N  + N+LVDMY K G    A  +F  +  +D
Sbjct: 280  LSACAELGDLENGRKVHAEIMEISMGKVNTLLGNALVDMYAKCGNIEEAIHVFWSIRDKD 339

Query: 835  VVSWNILVSGYASYGDVESAKVVFDRMVER----NFVTWSTMIAGFARSGNLDAARKLFD 1002
            V+SWN ++ G A +G  E +  +F  M+      N +T+  ++A  + +G +D   + FD
Sbjct: 340  VISWNTVIVGLAFHGHGEESLGLFKEMLRTKICPNDITFVGVLAACSHAGKVDEGYRYFD 399

Query: 1003 EM 1008
             M
Sbjct: 400  LM 401



 Score = 64.7 bits (156), Expect = 9e-08
 Identities = 56/234 (23%), Positives = 108/234 (46%), Gaps = 9/234 (3%)
 Frame = +1

Query: 331  LATLLLKCTAQLSMKQLLQVQAQIVTCAPPDLDDNLVAVKLIGVCSTHYKLNHAAFVFAQ 510
            L +LL  C     ++   +V A+I+  +   ++  L+   L+ + +    +  A  VF  
Sbjct: 276  LLSLLSACAELGDLENGRKVHAEIMEISMGKVN-TLLGNALVDMYAKCGNIEEAIHVFWS 334

Query: 511  LHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPCASNPDDYTFTSVLKACAGLLSVI 690
            + + ++I+WN ++   A +    E+L  F  +L +     P+D TF  VL AC+     +
Sbjct: 335  IRDKDVISWNTVIVGLAFHGHGEESLGLFKEMLRTKIC--PNDITFVGVLAACSHA-GKV 391

Query: 691  DGGKVHAYVAKTGYQSNLYVRNS--LVDMYFKFGYPTIAQQLFDEMTVR-DVVSWNILVS 861
            D G  +  + ++ Y+    +R+   +VDM  + G    A +  D M +  + + W  L+ 
Sbjct: 392  DEGYRYFDLMRSEYKIEPNIRHCGCMVDMLGRAGLLNKAAEFIDSMKIEPNAIVWRTLLG 451

Query: 862  GYASYGDVESAKVVFDRMVER------NFVTWSTMIAGFARSGNLDAARKLFDE 1005
                +GDVE AKV  +R++        ++V  S + A       ++  RKL D+
Sbjct: 452  ASKVHGDVEFAKVANERLLRMRKDHSGDYVLMSNLYASRGEWDGVEKVRKLMDD 505


>ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06145-like
            [Cucumis sativus]
          Length = 600

 Score =  237 bits (605), Expect = 8e-60
 Identities = 117/307 (38%), Positives = 194/307 (63%), Gaps = 2/307 (0%)
 Frame = +1

Query: 466  STHYKLNHAAFVFAQLHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPCASN--PDD 639
            S HY +    F F Q+ NPN+  +NA++K            R   C +     SN  P  
Sbjct: 86   SVHYPV----FAFTQMENPNVFVYNAMIKGFVY---CGYPFRALQCYVHMLEESNVLPTS 138

Query: 640  YTFTSVLKACAGLLSVIDGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFGYPTIAQQLFDE 819
            YTF+S++KAC  + +V  G  VH ++ K G++S+L+V+ +LVD Y K    + A+++FDE
Sbjct: 139  YTFSSLVKACTFMCAVELGQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDE 198

Query: 820  MTVRDVVSWNILVSGYASYGDVESAKVVFDRMVERNFVTWSTMIAGFARSGNLDAARKLF 999
            M  RD  +W  ++S  A  GD++SA+ +F+ M ERN  TW+TMI G+ R GN+++A  LF
Sbjct: 199  MCERDAFAWTAMLSALARVGDMDSARKLFEEMPERNTATWNTMIDGYTRLGNVESAELLF 258

Query: 1000 DEMTERNVVCWNAMIAGYVQNERYSDAVNLFRQMQQVGGLRPSDVTLVSVLSACAHLGAL 1179
            ++M  ++++ W  MI  Y QN++Y DA+ ++ +M ++ G+ P +VT+ +V SACAH+GAL
Sbjct: 259  NQMPTKDIISWTTMITCYSQNKQYQDALAIYSEM-RLNGIIPDEVTMSTVASACAHIGAL 317

Query: 1180 DLGKWVDRFITRSGTELNLFLGNALADMFVKCGFLADAKRVFDKMLERDVVSWSIIICGS 1359
            +LGK +  ++   G  L++++G+AL DM+ KCG L  +  +F K+ ++++  W+ +I G 
Sbjct: 318  ELGKEIHHYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGL 377

Query: 1360 AMHGHAE 1380
            A+HG+AE
Sbjct: 378  AVHGYAE 384



 Score = 87.4 bits (215), Expect = 1e-14
 Identities = 56/243 (23%), Positives = 124/243 (51%), Gaps = 9/243 (3%)
 Frame = +1

Query: 490  AAFVFAQLHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPCASNPDDYTFTSVLKAC 669
            A  +F Q+   ++I+W  ++  ++QN ++ + L  ++ +  +     PD+ T ++V  AC
Sbjct: 254  AELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYSEMRLNGII--PDEVTMSTVASAC 311

Query: 670  AGLLSVIDGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFGYPTIAQQLFDEMTVRDVVSWN 849
            A + ++  G ++H YV   G   ++Y+ ++LVDMY K G   ++  +F ++T +++  WN
Sbjct: 312  AHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWN 371

Query: 850  ILVSGYASYGDVESAKVVFDRM----VERNFVTWSTMIAGFARSGNLDAARKLFDEMT-- 1011
             ++ G A +G  E A  +F  M    +  N VT+ ++++    +G +D  R  F  MT  
Sbjct: 372  AVIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRD 431

Query: 1012 ---ERNVVCWNAMIAGYVQNERYSDAVNLFRQMQQVGGLRPSDVTLVSVLSACAHLGALD 1182
                 ++  +  M+    ++   ++A+ L + M+      P+ +   ++L+ C   G  +
Sbjct: 432  YDIRPDIRHYGCMVDMLSKSGYLNEALELIKSME----FEPNSIIWGALLNGCKLHGNCE 487

Query: 1183 LGK 1191
            + +
Sbjct: 488  IAE 490


>ref|XP_002301860.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550345843|gb|EEE81133.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 933

 Score =  237 bits (604), Expect = 1e-59
 Identities = 117/311 (37%), Positives = 195/311 (62%)
 Frame = +1

Query: 448  KLIGVCSTHYKLNHAAFVFAQLHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPCAS 627
            + I   ST  ++++A   + Q+  PN+  +NA++K   Q+++  + L  +  +L +  + 
Sbjct: 19   QFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQPVQALELYVQMLRANVS- 77

Query: 628  NPDDYTFTSVLKACAGLLSVIDGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFGYPTIAQQ 807
             P  YTF S++KAC  +  +     VH +V + G+ S+++V+ SLVD Y   G    + +
Sbjct: 78   -PTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTSLVDFYSSMGRIEESVR 136

Query: 808  LFDEMTVRDVVSWNILVSGYASYGDVESAKVVFDRMVERNFVTWSTMIAGFARSGNLDAA 987
            +FDEM  RDV +W  +VSG    GD+ SA  +FD M +RN  TW+T+I G+AR   +D A
Sbjct: 137  VFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPDRNLATWNTLIDGYARLREVDVA 196

Query: 988  RKLFDEMTERNVVCWNAMIAGYVQNERYSDAVNLFRQMQQVGGLRPSDVTLVSVLSACAH 1167
              LF++M  R+++ W  MI  Y QN+R+ +A+ +F +M +  G+ P +VT+ +V+SACAH
Sbjct: 197  ELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAK-HGISPDEVTMATVISACAH 255

Query: 1168 LGALDLGKWVDRFITRSGTELNLFLGNALADMFVKCGFLADAKRVFDKMLERDVVSWSII 1347
            LGALDLGK +  +I + G  L++++G+AL DM+ KCG L  +  +F K+ E+++  W+ +
Sbjct: 256  LGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFKLREKNLFCWNSV 315

Query: 1348 ICGSAMHGHAE 1380
            I G A+HG+AE
Sbjct: 316  IEGLAVHGYAE 326



 Score = 99.4 bits (246), Expect = 3e-18
 Identities = 62/233 (26%), Positives = 123/233 (52%), Gaps = 9/233 (3%)
 Frame = +1

Query: 490  AAFVFAQLHNPNLIAWNAILKAHAQNHKWAETLRYFNCLLSSPCASNPDDYTFTSVLKAC 669
            A  +F Q+   ++I+W  ++  ++QN ++ E L  FN +       +PD+ T  +V+ AC
Sbjct: 196  AELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAKH--GISPDEVTMATVISAC 253

Query: 670  AGLLSVIDGGKVHAYVAKTGYQSNLYVRNSLVDMYFKFGYPTIAQQLFDEMTVRDVVSWN 849
            A L ++  G ++H Y+ + G+  ++Y+ ++L+DMY K G    +  +F ++  +++  WN
Sbjct: 254  AHLGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFKLREKNLFCWN 313

Query: 850  ILVSGYASYGDVESAKVVFDRM----VERNFVTWSTMIAGFARSGNLDAARKLFDEMTER 1017
             ++ G A +G  E A  +FD+M    ++ N VT+ ++++    +G ++  RK F  MT  
Sbjct: 314  SVIEGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGLIEEGRKRFASMTRD 373

Query: 1018 N-----VVCWNAMIAGYVQNERYSDAVNLFRQMQQVGGLRPSDVTLVSVLSAC 1161
            +     V  +  M+    +     +A+ L R M+    L P+ V   ++LS C
Sbjct: 374  HSIPPGVEHYGCMVDLLSKAGLLEEALQLIRTMK----LEPNAVIWGALLSGC 422



 Score = 94.7 bits (234), Expect = 8e-17
 Identities = 66/255 (25%), Positives = 120/255 (47%), Gaps = 41/255 (16%)
 Frame = +1

Query: 739  NLYVRNSLVDMYFKFGYPTIAQQLFDEMTVRDVVSWNILVSGYASYGDVESAKVVFDRMV 918
            NL   N+L+D Y +     +A+ LF++M  RD++SW  +++ Y+       A  VF+ M 
Sbjct: 176  NLATWNTLIDGYARLREVDVAELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMA 235

Query: 919  ERNF----VTWSTMIAG-----------------------------------FARSGNLD 981
            +       VT +T+I+                                    +A+ G+LD
Sbjct: 236  KHGISPDEVTMATVISACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLD 295

Query: 982  AARKLFDEMTERNVVCWNAMIAGYVQNERYSDAVNLFRQMQQVGGLRPSDVTLVSVLSAC 1161
             +  +F ++ E+N+ CWN++I G   +    +A+ +F +M++   ++P+ VT VSVLSAC
Sbjct: 296  RSLLMFFKLREKNLFCWNSVIEGLAVHGYAEEALAMFDKMEREK-IKPNGVTFVSVLSAC 354

Query: 1162 AHLGALDLGKWVDRFITRS-GTELNLFLGNALADMFVKCGFLADAKRVFDKM-LERDVVS 1335
             H G ++ G+     +TR       +     + D+  K G L +A ++   M LE + V 
Sbjct: 355  NHAGLIEEGRKRFASMTRDHSIPPGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEPNAVI 414

Query: 1336 WSIIICGSAMHGHAE 1380
            W  ++ G  +H + E
Sbjct: 415  WGALLSGCKLHRNLE 429