BLASTX nr result
ID: Cocculus23_contig00031520
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00031520
(454 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004288283.1| PREDICTED: pentatricopeptide repeat-containi... 167 2e-39
ref|XP_003635488.1| PREDICTED: pentatricopeptide repeat-containi... 163 2e-38
ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containi... 163 3e-38
emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera] 163 3e-38
ref|XP_007208151.1| hypothetical protein PRUPE_ppa022107mg [Prun... 161 8e-38
gb|EXB78258.1| hypothetical protein L484_007776 [Morus notabilis] 156 3e-36
ref|XP_002320672.2| pentatricopeptide repeat-containing family p... 149 5e-34
emb|CBI18837.3| unnamed protein product [Vitis vinifera] 148 7e-34
ref|XP_006426150.1| hypothetical protein CICLE_v10025015mg [Citr... 147 1e-33
ref|XP_007047622.1| Pentatricopeptide repeat (PPR) superfamily p... 147 1e-33
ref|XP_006466415.1| PREDICTED: pentatricopeptide repeat-containi... 145 4e-33
ref|XP_006292229.1| hypothetical protein CARUB_v10018435mg [Caps... 145 6e-33
ref|XP_002875992.1| pentatricopeptide repeat-containing protein ... 143 3e-32
ref|XP_006358483.1| PREDICTED: pentatricopeptide repeat-containi... 142 4e-32
ref|XP_004230390.1| PREDICTED: pentatricopeptide repeat-containi... 142 5e-32
ref|XP_004513405.1| PREDICTED: pentatricopeptide repeat-containi... 142 6e-32
ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containi... 141 8e-32
ref|NP_190540.1| pentatricopeptide repeat-containing protein [Ar... 141 1e-31
ref|XP_006404111.1| hypothetical protein EUTSA_v10010157mg [Eutr... 139 5e-31
ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 136 3e-30
>ref|XP_004288283.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Fragaria vesca subsp. vesca]
Length = 719
Score = 167 bits (422), Expect = 2e-39
Identities = 76/88 (86%), Positives = 82/88 (93%)
Frame = +3
Query: 3 ALVKDGGAVEGEKEIMLGHHSEKLAIAFGLLSTKEREPILVVKNLRVCGDCHNAIKFISA 182
ALVKD VEGEKEIMLGHHSEKLA+AFGL+ST+E EPILVVKNLR+CGDCHNAIKFISA
Sbjct: 632 ALVKDDETVEGEKEIMLGHHSEKLAVAFGLISTREGEPILVVKNLRICGDCHNAIKFISA 691
Query: 183 IVSREITVRDAHRFHCFKEGRCSCGDYW 266
I REITVRDAHRFHCFK+G+CSCGDYW
Sbjct: 692 IAGREITVRDAHRFHCFKDGQCSCGDYW 719
>ref|XP_003635488.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 358
Score = 163 bits (413), Expect = 2e-38
Identities = 75/88 (85%), Positives = 80/88 (90%)
Frame = +3
Query: 3 ALVKDGGAVEGEKEIMLGHHSEKLAIAFGLLSTKEREPILVVKNLRVCGDCHNAIKFISA 182
ALVKD G GEKEI LGHHSEKLA+AFGL+STK+ EPILVVKNLR+CGDCHNAIKFISA
Sbjct: 271 ALVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPILVVKNLRICGDCHNAIKFISA 330
Query: 183 IVSREITVRDAHRFHCFKEGRCSCGDYW 266
I REITVRDAHRFHCFKEG+CSCGDYW
Sbjct: 331 IAGREITVRDAHRFHCFKEGQCSCGDYW 358
>ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 163 bits (412), Expect = 3e-38
Identities = 74/88 (84%), Positives = 80/88 (90%)
Frame = +3
Query: 3 ALVKDGGAVEGEKEIMLGHHSEKLAIAFGLLSTKEREPILVVKNLRVCGDCHNAIKFISA 182
ALVKD G GEKEI LGHHSEKLA+AFGL+STK+ EP+LVVKNLR+CGDCHNAIKFISA
Sbjct: 632 ALVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKFISA 691
Query: 183 IVSREITVRDAHRFHCFKEGRCSCGDYW 266
I REITVRDAHRFHCFKEG+CSCGDYW
Sbjct: 692 IAGREITVRDAHRFHCFKEGQCSCGDYW 719
>emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 163 bits (412), Expect = 3e-38
Identities = 74/88 (84%), Positives = 80/88 (90%)
Frame = +3
Query: 3 ALVKDGGAVEGEKEIMLGHHSEKLAIAFGLLSTKEREPILVVKNLRVCGDCHNAIKFISA 182
ALVKD G GEKEI LGHHSEKLA+AFGL+STK+ EP+LVVKNLR+CGDCHNAIKFISA
Sbjct: 632 ALVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKFISA 691
Query: 183 IVSREITVRDAHRFHCFKEGRCSCGDYW 266
I REITVRDAHRFHCFKEG+CSCGDYW
Sbjct: 692 IAGREITVRDAHRFHCFKEGQCSCGDYW 719
>ref|XP_007208151.1| hypothetical protein PRUPE_ppa022107mg [Prunus persica]
gi|462403793|gb|EMJ09350.1| hypothetical protein
PRUPE_ppa022107mg [Prunus persica]
Length = 720
Score = 161 bits (408), Expect = 8e-38
Identities = 73/87 (83%), Positives = 80/87 (91%)
Frame = +3
Query: 6 LVKDGGAVEGEKEIMLGHHSEKLAIAFGLLSTKEREPILVVKNLRVCGDCHNAIKFISAI 185
LVKD +V+GEKEI LGHHSEKLA+AFGL+ST++ EPILVVKNLR+CGDCHNAIKFISAI
Sbjct: 634 LVKDDESVQGEKEIRLGHHSEKLAVAFGLISTRKGEPILVVKNLRICGDCHNAIKFISAI 693
Query: 186 VSREITVRDAHRFHCFKEGRCSCGDYW 266
REITVRDAHRFHCFKEG CSCGDYW
Sbjct: 694 AGREITVRDAHRFHCFKEGHCSCGDYW 720
>gb|EXB78258.1| hypothetical protein L484_007776 [Morus notabilis]
Length = 719
Score = 156 bits (394), Expect = 3e-36
Identities = 71/88 (80%), Positives = 78/88 (88%)
Frame = +3
Query: 3 ALVKDGGAVEGEKEIMLGHHSEKLAIAFGLLSTKEREPILVVKNLRVCGDCHNAIKFISA 182
A+VK+ AV+GEKEI LGHHSEKLA+AFGL+STKE E ILVVKNLR+CGDCHNAIKFISA
Sbjct: 632 AMVKEDEAVDGEKEIRLGHHSEKLAVAFGLISTKEGEAILVVKNLRICGDCHNAIKFISA 691
Query: 183 IVSREITVRDAHRFHCFKEGRCSCGDYW 266
+ REITVRD HRFHCFK G CSCGDYW
Sbjct: 692 VTGREITVRDNHRFHCFKGGHCSCGDYW 719
>ref|XP_002320672.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550323097|gb|EEE98987.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 720
Score = 149 bits (375), Expect = 5e-34
Identities = 68/88 (77%), Positives = 76/88 (86%)
Frame = +3
Query: 3 ALVKDGGAVEGEKEIMLGHHSEKLAIAFGLLSTKEREPILVVKNLRVCGDCHNAIKFISA 182
A VKD E EKEIML HHSEKLA+AFGLL TK EP+LVVKNLR+CGDCHNAIKF+SA
Sbjct: 633 AFVKDDETGEQEKEIMLAHHSEKLAVAFGLLFTKHGEPLLVVKNLRICGDCHNAIKFMSA 692
Query: 183 IVSREITVRDAHRFHCFKEGRCSCGDYW 266
I R+ITVRDA+RFHCF++GRCSCGDYW
Sbjct: 693 IARRKITVRDAYRFHCFEDGRCSCGDYW 720
>emb|CBI18837.3| unnamed protein product [Vitis vinifera]
Length = 1589
Score = 148 bits (374), Expect = 7e-34
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +3
Query: 3 ALVKDGGAVEGEKEIMLGHHSEKLAIAFGLLSTKEREPILVVKNLRVCGDCHNAIKFISA 182
ALVKD G GEKEI LGHHSEKLA+AFGL+STK+ EPILVVKNLR+CGDCHNAIKFISA
Sbjct: 258 ALVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPILVVKNLRICGDCHNAIKFISA 317
Query: 183 IVSREITVRDAHRFHCFKEGRCS 251
I REITVRDAHRFHCFKEG+CS
Sbjct: 318 IAGREITVRDAHRFHCFKEGQCS 340
>ref|XP_006426150.1| hypothetical protein CICLE_v10025015mg [Citrus clementina]
gi|557528140|gb|ESR39390.1| hypothetical protein
CICLE_v10025015mg [Citrus clementina]
Length = 718
Score = 147 bits (371), Expect = 1e-33
Identities = 69/88 (78%), Positives = 74/88 (84%)
Frame = +3
Query: 3 ALVKDGGAVEGEKEIMLGHHSEKLAIAFGLLSTKEREPILVVKNLRVCGDCHNAIKFISA 182
ALVKD GEKE L HHSEKLA+AFGLLST EPILV+KNLR+CGDCHNAIKFISA
Sbjct: 631 ALVKDDEIGHGEKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISA 690
Query: 183 IVSREITVRDAHRFHCFKEGRCSCGDYW 266
I REITVRD +RFHCFK+GRCSCGDYW
Sbjct: 691 IAGREITVRDTYRFHCFKDGRCSCGDYW 718
>ref|XP_007047622.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao] gi|508699883|gb|EOX91779.1| Pentatricopeptide
repeat (PPR) superfamily protein [Theobroma cacao]
Length = 718
Score = 147 bits (371), Expect = 1e-33
Identities = 68/87 (78%), Positives = 74/87 (85%)
Frame = +3
Query: 6 LVKDGGAVEGEKEIMLGHHSEKLAIAFGLLSTKEREPILVVKNLRVCGDCHNAIKFISAI 185
LVKD GEKEI LG HSEKLA+AFGLLSTK+ EPILV+KNLR+CGDCHNAIKFISAI
Sbjct: 632 LVKDDEIEPGEKEIRLGQHSEKLAVAFGLLSTKDGEPILVIKNLRICGDCHNAIKFISAI 691
Query: 186 VSREITVRDAHRFHCFKEGRCSCGDYW 266
REITVRD RFH FK+G+CSCGDYW
Sbjct: 692 AGREITVRDTRRFHSFKDGKCSCGDYW 718
>ref|XP_006466415.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Citrus sinensis]
Length = 718
Score = 145 bits (367), Expect = 4e-33
Identities = 69/88 (78%), Positives = 73/88 (82%)
Frame = +3
Query: 3 ALVKDGGAVEGEKEIMLGHHSEKLAIAFGLLSTKEREPILVVKNLRVCGDCHNAIKFISA 182
ALVKD GEKE L HHSEKLA+AFGLLST EPILV+KNLR+CGDCHNAIKFISA
Sbjct: 631 ALVKDDEIGHGEKEKRLVHHSEKLAVAFGLLSTSYGEPILVMKNLRICGDCHNAIKFISA 690
Query: 183 IVSREITVRDAHRFHCFKEGRCSCGDYW 266
I REITVRD +RFHCFK GRCSCGDYW
Sbjct: 691 IAGREITVRDTYRFHCFKGGRCSCGDYW 718
>ref|XP_006292229.1| hypothetical protein CARUB_v10018435mg [Capsella rubella]
gi|482560936|gb|EOA25127.1| hypothetical protein
CARUB_v10018435mg [Capsella rubella]
Length = 721
Score = 145 bits (366), Expect = 6e-33
Identities = 63/88 (71%), Positives = 78/88 (88%)
Frame = +3
Query: 3 ALVKDGGAVEGEKEIMLGHHSEKLAIAFGLLSTKEREPILVVKNLRVCGDCHNAIKFISA 182
A+VK+ GA EGE+E+ LGHHSEKLA+AFGL+ST++ E ++VVKNLR+CGDCHNAIKF+SA
Sbjct: 634 AMVKEDGAGEGEEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSA 693
Query: 183 IVSREITVRDAHRFHCFKEGRCSCGDYW 266
+ REI VRD RFHCFK+G+CSCGDYW
Sbjct: 694 VAGREIIVRDNLRFHCFKDGKCSCGDYW 721
>ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297321830|gb|EFH52251.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 721
Score = 143 bits (360), Expect = 3e-32
Identities = 63/88 (71%), Positives = 77/88 (87%)
Frame = +3
Query: 3 ALVKDGGAVEGEKEIMLGHHSEKLAIAFGLLSTKEREPILVVKNLRVCGDCHNAIKFISA 182
A+VK+ A EGE+E+ LGHHSEKLA+AFGL+ST++ E I+VVKNLR+CGDCHNAIKF+SA
Sbjct: 634 AMVKEDEAGEGEEEMRLGHHSEKLAVAFGLMSTRDGEEIVVVKNLRICGDCHNAIKFMSA 693
Query: 183 IVSREITVRDAHRFHCFKEGRCSCGDYW 266
+ REI VRD RFHCFK+G+CSCGDYW
Sbjct: 694 VAGREIIVRDNLRFHCFKDGKCSCGDYW 721
>ref|XP_006358483.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Solanum tuberosum]
Length = 720
Score = 142 bits (359), Expect = 4e-32
Identities = 62/88 (70%), Positives = 73/88 (82%)
Frame = +3
Query: 3 ALVKDGGAVEGEKEIMLGHHSEKLAIAFGLLSTKEREPILVVKNLRVCGDCHNAIKFISA 182
A+++D G + EKE L HHSEKLA+AFGLLSTK+ EPIL++KNLR+CGDCHNAIK +S
Sbjct: 633 AMMRDDGTRQEEKERSLWHHSEKLAVAFGLLSTKDGEPILIIKNLRICGDCHNAIKILSG 692
Query: 183 IVSREITVRDAHRFHCFKEGRCSCGDYW 266
+ REITVRD HRFHCFK G CSCGDYW
Sbjct: 693 MTGREITVRDCHRFHCFKAGACSCGDYW 720
>ref|XP_004230390.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Solanum lycopersicum]
Length = 720
Score = 142 bits (358), Expect = 5e-32
Identities = 62/88 (70%), Positives = 73/88 (82%)
Frame = +3
Query: 3 ALVKDGGAVEGEKEIMLGHHSEKLAIAFGLLSTKEREPILVVKNLRVCGDCHNAIKFISA 182
AL++D G + EKE L HHSEKLA+AFG+LSTK+ EPIL++KNLR+CGDCHNAIK +S
Sbjct: 633 ALMRDDGTRQEEKERSLWHHSEKLAVAFGILSTKDGEPILIIKNLRICGDCHNAIKILSG 692
Query: 183 IVSREITVRDAHRFHCFKEGRCSCGDYW 266
+ REITVRD HRFHCFK G CSCGDYW
Sbjct: 693 MTGREITVRDCHRFHCFKGGACSCGDYW 720
>ref|XP_004513405.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cicer arietinum]
Length = 722
Score = 142 bits (357), Expect = 6e-32
Identities = 68/88 (77%), Positives = 71/88 (80%)
Frame = +3
Query: 3 ALVKDGGAVEGEKEIMLGHHSEKLAIAFGLLSTKEREPILVVKNLRVCGDCHNAIKFISA 182
ALVKD EKE L HHSEKLAIAFGL+ST E PILVVKNLR+CGDCHNAIK ISA
Sbjct: 635 ALVKDEEVAPEEKERRLWHHSEKLAIAFGLISTAEGVPILVVKNLRICGDCHNAIKLISA 694
Query: 183 IVSREITVRDAHRFHCFKEGRCSCGDYW 266
I REITVRD HRFHCFKEG+CSC DYW
Sbjct: 695 ISGREITVRDTHRFHCFKEGKCSCRDYW 722
>ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 141 bits (356), Expect = 8e-32
Identities = 67/88 (76%), Positives = 72/88 (81%)
Frame = +3
Query: 3 ALVKDGGAVEGEKEIMLGHHSEKLAIAFGLLSTKEREPILVVKNLRVCGDCHNAIKFISA 182
ALVKD EKE L +HSEKLA+AFGL+ST+E PILVVKNLR+CGDCHNAIK ISA
Sbjct: 635 ALVKDEEVEPDEKERRLLYHSEKLAVAFGLISTEEWVPILVVKNLRICGDCHNAIKLISA 694
Query: 183 IVSREITVRDAHRFHCFKEGRCSCGDYW 266
I REITVRD HRFHCFKEG CSCGDYW
Sbjct: 695 ITGREITVRDTHRFHCFKEGHCSCGDYW 722
>ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g49710 gi|6723416|emb|CAB66909.1| putative protein
[Arabidopsis thaliana] gi|332645058|gb|AEE78579.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 721
Score = 141 bits (355), Expect = 1e-31
Identities = 61/88 (69%), Positives = 77/88 (87%)
Frame = +3
Query: 3 ALVKDGGAVEGEKEIMLGHHSEKLAIAFGLLSTKEREPILVVKNLRVCGDCHNAIKFISA 182
A+VK+ A EG++E+ LGHHSEKLA+AFGL+ST++ E ++VVKNLR+CGDCHNAIKF+SA
Sbjct: 634 AMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSA 693
Query: 183 IVSREITVRDAHRFHCFKEGRCSCGDYW 266
+ REI VRD RFHCFK+G+CSCGDYW
Sbjct: 694 VAGREIIVRDNLRFHCFKDGKCSCGDYW 721
>ref|XP_006404111.1| hypothetical protein EUTSA_v10010157mg [Eutrema salsugineum]
gi|557105230|gb|ESQ45564.1| hypothetical protein
EUTSA_v10010157mg [Eutrema salsugineum]
Length = 721
Score = 139 bits (349), Expect = 5e-31
Identities = 62/88 (70%), Positives = 74/88 (84%)
Frame = +3
Query: 3 ALVKDGGAVEGEKEIMLGHHSEKLAIAFGLLSTKEREPILVVKNLRVCGDCHNAIKFISA 182
A+VK+ A EGE+E LGHHSEKLA+AFGL+ST+E E I+V KNLR+CGDCHNAIKF+SA
Sbjct: 634 AMVKEDEAGEGEEEKRLGHHSEKLAVAFGLMSTREGEEIVVKKNLRICGDCHNAIKFMSA 693
Query: 183 IVSREITVRDAHRFHCFKEGRCSCGDYW 266
+ REI VRD RFHCFK+G+CSC DYW
Sbjct: 694 VAGREIIVRDTLRFHCFKDGKCSCSDYW 721
>ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 136 bits (343), Expect = 3e-30
Identities = 58/77 (75%), Positives = 70/77 (90%)
Frame = +3
Query: 36 EKEIMLGHHSEKLAIAFGLLSTKEREPILVVKNLRVCGDCHNAIKFISAIVSREITVRDA 215
E+E+ LGHHSEKLA++FGL+ST+E EPILV KNLR+C DCHNAIK+IS +V REITVRD+
Sbjct: 644 EEELRLGHHSEKLAVSFGLMSTREGEPILVFKNLRICVDCHNAIKYISEVVKREITVRDS 703
Query: 216 HRFHCFKEGRCSCGDYW 266
HRFHCFK+G+CSCG YW
Sbjct: 704 HRFHCFKDGQCSCGGYW 720