BLASTX nr result
ID: Cocculus23_contig00031460
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00031460
(300 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containi... 140 2e-31
emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera] 140 2e-31
ref|XP_004514991.1| PREDICTED: pentatricopeptide repeat-containi... 131 9e-29
ref|XP_007152410.1| hypothetical protein PHAVU_004G127800g [Phas... 130 1e-28
ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containi... 127 2e-27
ref|XP_003619639.1| Pentatricopeptide repeat-containing protein ... 126 4e-27
ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containi... 100 4e-19
emb|CBI31119.3| unnamed protein product [Vitis vinifera] 100 4e-19
ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containi... 98 1e-18
emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera] 98 1e-18
ref|XP_007222052.1| hypothetical protein PRUPE_ppa003120mg [Prun... 98 1e-18
gb|EXB90004.1| hypothetical protein L484_023657 [Morus notabilis] 97 2e-18
ref|XP_007141857.1| hypothetical protein PHAVU_008G231600g [Phas... 97 3e-18
ref|XP_006372460.1| hypothetical protein POPTR_0017s01850g [Popu... 97 3e-18
ref|XP_004298455.1| PREDICTED: putative pentatricopeptide repeat... 97 3e-18
ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat... 96 4e-18
emb|CBI16436.3| unnamed protein product [Vitis vinifera] 96 4e-18
ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containi... 96 4e-18
emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera] 96 4e-18
ref|NP_201453.1| pentatricopeptide repeat-containing protein [Ar... 96 5e-18
>ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 140 bits (352), Expect = 2e-31
Identities = 66/100 (66%), Positives = 81/100 (81%)
Frame = +1
Query: 1 VSWSIVIAGFVQVGGFLEALELFHKMLHTGPSPNEFTLVSALTACANLRALDQGRWIHAY 180
VSW+ +IAG+VQVG F EAL+LFH+ML TGP PNEFTL SAL ACANL ALDQGRWIH Y
Sbjct: 215 VSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVY 274
Query: 181 IERARIRMNERLLTIHIDM*AKCGQMEFTSKVFYAADNLK 300
I+++ I+MNERLL +DM AKCG+++F +KVF+ LK
Sbjct: 275 IDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLK 314
>emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 140 bits (352), Expect = 2e-31
Identities = 66/100 (66%), Positives = 81/100 (81%)
Frame = +1
Query: 1 VSWSIVIAGFVQVGGFLEALELFHKMLHTGPSPNEFTLVSALTACANLRALDQGRWIHAY 180
VSW+ +IAG+VQVG F EAL+LFH+ML TGP PNEFTL SAL ACANL ALDQGRWIH Y
Sbjct: 130 VSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVY 189
Query: 181 IERARIRMNERLLTIHIDM*AKCGQMEFTSKVFYAADNLK 300
I+++ I+MNERLL +DM AKCG+++F +KVF+ LK
Sbjct: 190 IDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLK 229
>ref|XP_004514991.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cicer arietinum]
Length = 690
Score = 131 bits (330), Expect = 9e-29
Identities = 62/94 (65%), Positives = 74/94 (78%)
Frame = +1
Query: 1 VSWSIVIAGFVQVGGFLEALELFHKMLHTGPSPNEFTLVSALTACANLRALDQGRWIHAY 180
VSWS +IAG+VQVG F+EAL+ FHKML T PNE+T+VSAL AC+NL ALDQG+WIH Y
Sbjct: 281 VSWSTIIAGYVQVGCFMEALDFFHKMLQTKVKPNEYTMVSALAACSNLVALDQGKWIHVY 340
Query: 181 IERARIRMNERLLTIHIDM*AKCGQMEFTSKVFY 282
I R I+MN+RLL IDM AKCG++E S VFY
Sbjct: 341 IRRGEIKMNDRLLASLIDMYAKCGEIESASSVFY 374
>ref|XP_007152410.1| hypothetical protein PHAVU_004G127800g [Phaseolus vulgaris]
gi|561025719|gb|ESW24404.1| hypothetical protein
PHAVU_004G127800g [Phaseolus vulgaris]
Length = 623
Score = 130 bits (328), Expect = 1e-28
Identities = 61/94 (64%), Positives = 76/94 (80%)
Frame = +1
Query: 1 VSWSIVIAGFVQVGGFLEALELFHKMLHTGPSPNEFTLVSALTACANLRALDQGRWIHAY 180
VSWS +IAG+VQVG F+EAL+ F++ML GP PNE+TLVSA AC+NL ALDQG+WIHAY
Sbjct: 214 VSWSTIIAGYVQVGCFVEALDFFNEMLQIGPRPNEYTLVSAFAACSNLVALDQGKWIHAY 273
Query: 181 IERARIRMNERLLTIHIDM*AKCGQMEFTSKVFY 282
I R I+MNERLL IDM AKCG++E S++F+
Sbjct: 274 IGRGEIKMNERLLASIIDMYAKCGEIESASRIFF 307
>ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 127 bits (318), Expect = 2e-27
Identities = 61/100 (61%), Positives = 78/100 (78%)
Frame = +1
Query: 1 VSWSIVIAGFVQVGGFLEALELFHKMLHTGPSPNEFTLVSALTACANLRALDQGRWIHAY 180
VSW+ +I+G +QVG F+EAL++FH ML G SPNE+TL S+L ACANL ALDQGRW+H Y
Sbjct: 200 VSWTTMISGCLQVGYFMEALDIFHNMLAKGMSPNEYTLASSLAACANLVALDQGRWMHVY 259
Query: 181 IERARIRMNERLLTIHIDM*AKCGQMEFTSKVFYAADNLK 300
I++ I+MNERLL IDM AKCG++EF SK+F + LK
Sbjct: 260 IKKNNIQMNERLLAGLIDMYAKCGELEFASKLFNSNPRLK 299
>ref|XP_003619639.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494654|gb|AES75857.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1182
Score = 126 bits (316), Expect = 4e-27
Identities = 59/94 (62%), Positives = 74/94 (78%)
Frame = +1
Query: 1 VSWSIVIAGFVQVGGFLEALELFHKMLHTGPSPNEFTLVSALTACANLRALDQGRWIHAY 180
VSWS +IAG+VQVG F+EAL+ FHKML + PNE+T+VSAL AC+NL ALDQG+WIH Y
Sbjct: 376 VSWSTIIAGYVQVGCFMEALDFFHKMLQSEVKPNEYTMVSALAACSNLVALDQGKWIHVY 435
Query: 181 IERARIRMNERLLTIHIDM*AKCGQMEFTSKVFY 282
I R I+MN+RLL IDM AKCG+++ S VF+
Sbjct: 436 IRRDNIKMNDRLLASLIDMYAKCGEIDSASSVFH 469
>ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 537
Score = 99.8 bits (247), Expect = 4e-19
Identities = 52/93 (55%), Positives = 64/93 (68%)
Frame = +1
Query: 1 VSWSIVIAGFVQVGGFLEALELFHKMLHTGPSPNEFTLVSALTACANLRALDQGRWIHAY 180
VSWS +I G+ Q+G F EALELF+ M G PN +V ALTACA L ALDQGRWIHAY
Sbjct: 211 VSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQGRWIHAY 270
Query: 181 IERARIRMNERLLTIHIDM*AKCGQMEFTSKVF 279
++R R+ ++ L T IDM AKCG +E +VF
Sbjct: 271 VDRNRMVLDRILGTALIDMYAKCGCVETACRVF 303
>emb|CBI31119.3| unnamed protein product [Vitis vinifera]
Length = 512
Score = 99.8 bits (247), Expect = 4e-19
Identities = 52/93 (55%), Positives = 64/93 (68%)
Frame = +1
Query: 1 VSWSIVIAGFVQVGGFLEALELFHKMLHTGPSPNEFTLVSALTACANLRALDQGRWIHAY 180
VSWS +I G+ Q+G F EALELF+ M G PN +V ALTACA L ALDQGRWIHAY
Sbjct: 186 VSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQGRWIHAY 245
Query: 181 IERARIRMNERLLTIHIDM*AKCGQMEFTSKVF 279
++R R+ ++ L T IDM AKCG +E +VF
Sbjct: 246 VDRNRMVLDRILGTALIDMYAKCGCVETACRVF 278
>ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 98.2 bits (243), Expect = 1e-18
Identities = 48/98 (48%), Positives = 66/98 (67%)
Frame = +1
Query: 1 VSWSIVIAGFVQVGGFLEALELFHKMLHTGPSPNEFTLVSALTACANLRALDQGRWIHAY 180
+SWS +I G++Q G F+EALE+FH+M P +F L S L+ACANL ALDQGRWIH Y
Sbjct: 268 ISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTY 327
Query: 181 IERARIRMNERLLTIHIDM*AKCGQMEFTSKVFYAADN 294
+R I+++ L T +DM AKCG+++ +VF N
Sbjct: 328 AKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSN 365
>emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 98.2 bits (243), Expect = 1e-18
Identities = 48/98 (48%), Positives = 66/98 (67%)
Frame = +1
Query: 1 VSWSIVIAGFVQVGGFLEALELFHKMLHTGPSPNEFTLVSALTACANLRALDQGRWIHAY 180
+SWS +I G++Q G F+EALE+FH+M P +F L S L+ACANL ALDQGRWIH Y
Sbjct: 269 ISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTY 328
Query: 181 IERARIRMNERLLTIHIDM*AKCGQMEFTSKVFYAADN 294
+R I+++ L T +DM AKCG+++ +VF N
Sbjct: 329 AKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSN 366
>ref|XP_007222052.1| hypothetical protein PRUPE_ppa003120mg [Prunus persica]
gi|462418988|gb|EMJ23251.1| hypothetical protein
PRUPE_ppa003120mg [Prunus persica]
Length = 601
Score = 97.8 bits (242), Expect = 1e-18
Identities = 49/94 (52%), Positives = 63/94 (67%)
Frame = +1
Query: 1 VSWSIVIAGFVQVGGFLEALELFHKMLHTGPSPNEFTLVSALTACANLRALDQGRWIHAY 180
++W+ +IAG+ Q G EAL LFH M G NE ++VS L+AC++L ALDQGRW HAY
Sbjct: 195 IAWNAMIAGYAQCGKSREALNLFHLMQMEGVRVNEVSMVSVLSACSHLGALDQGRWAHAY 254
Query: 181 IERARIRMNERLLTIHIDM*AKCGQMEFTSKVFY 282
IER ++RM L T IDM AKCG M +VF+
Sbjct: 255 IERNKLRMTVTLGTALIDMYAKCGNMNKAMEVFW 288
>gb|EXB90004.1| hypothetical protein L484_023657 [Morus notabilis]
Length = 616
Score = 97.1 bits (240), Expect = 2e-18
Identities = 47/93 (50%), Positives = 64/93 (68%)
Frame = +1
Query: 1 VSWSIVIAGFVQVGGFLEALELFHKMLHTGPSPNEFTLVSALTACANLRALDQGRWIHAY 180
+SWS + G+++ G F EALE+F+ M G P +F L S L ACAN+ ALDQGRWIHAY
Sbjct: 288 ISWSAITNGYIKGGYFKEALEVFYLMQREGIGPRKFILSSVLAACANVGALDQGRWIHAY 347
Query: 181 IERARIRMNERLLTIHIDM*AKCGQMEFTSKVF 279
+ER IR++ L T +DM AKCG+++ +VF
Sbjct: 348 VERNLIRVDAVLGTALLDMYAKCGRLDLAWEVF 380
>ref|XP_007141857.1| hypothetical protein PHAVU_008G231600g [Phaseolus vulgaris]
gi|561014990|gb|ESW13851.1| hypothetical protein
PHAVU_008G231600g [Phaseolus vulgaris]
Length = 525
Score = 96.7 bits (239), Expect = 3e-18
Identities = 47/96 (48%), Positives = 64/96 (66%)
Frame = +1
Query: 1 VSWSIVIAGFVQVGGFLEALELFHKMLHTGPSPNEFTLVSALTACANLRALDQGRWIHAY 180
VSW+ +I+G+V+ G E LELF KM G P+EFT+VS L+ACA+L AL G W+H Y
Sbjct: 220 VSWNSMISGYVRNGRLTEGLELFRKMQEEGVEPSEFTMVSLLSACAHLGALQHGEWVHDY 279
Query: 181 IERARIRMNERLLTIHIDM*AKCGQMEFTSKVFYAA 288
I+R ++N +LT IDM KCG +E +VF A+
Sbjct: 280 IKRGNFKLNVIVLTAIIDMYCKCGSIEKAVEVFAAS 315
>ref|XP_006372460.1| hypothetical protein POPTR_0017s01850g [Populus trichocarpa]
gi|550319085|gb|ERP50257.1| hypothetical protein
POPTR_0017s01850g [Populus trichocarpa]
Length = 446
Score = 96.7 bits (239), Expect = 3e-18
Identities = 50/98 (51%), Positives = 66/98 (67%)
Frame = +1
Query: 1 VSWSIVIAGFVQVGGFLEALELFHKMLHTGPSPNEFTLVSALTACANLRALDQGRWIHAY 180
VSW +IAG+V++G F EALE+F+ M +G N ++V ALTACA L ALDQGRWIHAY
Sbjct: 128 VSWGALIAGYVRIGFFKEALEVFYDMQVSGFRLNRASIVGALTACAFLGALDQGRWIHAY 187
Query: 181 IERARIRMNERLLTIHIDM*AKCGQMEFTSKVFYAADN 294
++R + ++ L T IDM AKCG +E VF D+
Sbjct: 188 VKRHHMSLDRMLGTALIDMYAKCGCIEMACSVFDEMDD 225
>ref|XP_004298455.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Fragaria vesca subsp. vesca]
Length = 614
Score = 96.7 bits (239), Expect = 3e-18
Identities = 49/94 (52%), Positives = 62/94 (65%)
Frame = +1
Query: 1 VSWSIVIAGFVQVGGFLEALELFHKMLHTGPSPNEFTLVSALTACANLRALDQGRWIHAY 180
V+W+ IAG+ Q G EAL LFH M G NE +VS L+AC++L ALDQGRW HAY
Sbjct: 207 VAWNATIAGYAQCGKSREALGLFHLMQVEGVRVNEVCMVSVLSACSHLGALDQGRWAHAY 266
Query: 181 IERARIRMNERLLTIHIDM*AKCGQMEFTSKVFY 282
IER+++RM L T +DM AKCG M +VF+
Sbjct: 267 IERSKVRMTVALGTALLDMYAKCGNMSKAMEVFW 300
>ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 96.3 bits (238), Expect = 4e-18
Identities = 48/94 (51%), Positives = 64/94 (68%)
Frame = +1
Query: 1 VSWSIVIAGFVQVGGFLEALELFHKMLHTGPSPNEFTLVSALTACANLRALDQGRWIHAY 180
++W+ +I+G+VQ G EAL LF+ M G NE ++VS L+AC++L ALDQGRW HAY
Sbjct: 209 IAWNAMISGYVQCGQSREALSLFNLMQREGVKVNEVSMVSVLSACSHLGALDQGRWAHAY 268
Query: 181 IERARIRMNERLLTIHIDM*AKCGQMEFTSKVFY 282
IER ++RM L T IDM AKCG M +VF+
Sbjct: 269 IERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFW 302
>emb|CBI16436.3| unnamed protein product [Vitis vinifera]
Length = 545
Score = 96.3 bits (238), Expect = 4e-18
Identities = 50/100 (50%), Positives = 65/100 (65%)
Frame = +1
Query: 1 VSWSIVIAGFVQVGGFLEALELFHKMLHTGPSPNEFTLVSALTACANLRALDQGRWIHAY 180
VSW+ +IAG+VQVG F EAL+LFH+ML T ALDQGRWIH Y
Sbjct: 188 VSWTTIIAGYVQVGCFKEALDLFHEMLQTV-------------------ALDQGRWIHVY 228
Query: 181 IERARIRMNERLLTIHIDM*AKCGQMEFTSKVFYAADNLK 300
I+++ I+MNERLL +DM AKCG+++F +KVF+ LK
Sbjct: 229 IDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLK 268
>ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
[Vitis vinifera] gi|296089231|emb|CBI39003.3| unnamed
protein product [Vitis vinifera]
Length = 601
Score = 96.3 bits (238), Expect = 4e-18
Identities = 44/93 (47%), Positives = 66/93 (70%)
Frame = +1
Query: 1 VSWSIVIAGFVQVGGFLEALELFHKMLHTGPSPNEFTLVSALTACANLRALDQGRWIHAY 180
VSW +IAG+VQ + EAL++F +M+ G PN+ T+ SALTACA L +LDQGRW+H Y
Sbjct: 272 VSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEY 331
Query: 181 IERARIRMNERLLTIHIDM*AKCGQMEFTSKVF 279
++R+++ +N +L T +DM +KCG ++ VF
Sbjct: 332 VDRSKLGLNSKLGTALVDMYSKCGCVDEALLVF 364
Score = 63.9 bits (154), Expect = 2e-08
Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 VSWSIVIAGFVQVGGFLEALELFHKMLHTGPSPNEFTLVSALTACANLRALDQGRWIHA- 177
VSW+ +I G ++ G +EALE F +M +G +E T+VS L A A LR + GRW+H
Sbjct: 170 VSWTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGF 229
Query: 178 YIERARIRMNERLLTIHIDM*AKCGQMEFTSKVF 279
Y+E R+ + + + +DM +KCG + KVF
Sbjct: 230 YVESGRVIWDVYVGSALVDMYSKCGYCDDAVKVF 263
>emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
Length = 601
Score = 96.3 bits (238), Expect = 4e-18
Identities = 44/93 (47%), Positives = 66/93 (70%)
Frame = +1
Query: 1 VSWSIVIAGFVQVGGFLEALELFHKMLHTGPSPNEFTLVSALTACANLRALDQGRWIHAY 180
VSW +IAG+VQ + EAL++F +M+ G PN+ T+ SALTACA L +LDQGRW+H Y
Sbjct: 272 VSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEY 331
Query: 181 IERARIRMNERLLTIHIDM*AKCGQMEFTSKVF 279
++R+++ +N +L T +DM +KCG ++ VF
Sbjct: 332 VDRSKLGLNSKLGTALVDMYSKCGCVDEALLVF 364
Score = 64.3 bits (155), Expect = 2e-08
Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 VSWSIVIAGFVQVGGFLEALELFHKMLHTGPSPNEFTLVSALTACANLRALDQGRWIHA- 177
VSW+ +I G ++ G +EALE F +M +G +E T+VS L A A LR + GRW+H
Sbjct: 170 VSWTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGF 229
Query: 178 YIERARIRMNERLLTIHIDM*AKCGQMEFTSKVF 279
Y+E R+ + + + +DM +KCG + KVF
Sbjct: 230 YVESGRVIWDVYVGSALVDMYSKCGYCDDAVKVF 263
>ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g66520 gi|10177533|dbj|BAB10928.1| selenium-binding
protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 95.9 bits (237), Expect = 5e-18
Identities = 45/93 (48%), Positives = 67/93 (72%)
Frame = +1
Query: 1 VSWSIVIAGFVQVGGFLEALELFHKMLHTGPSPNEFTLVSALTACANLRALDQGRWIHAY 180
+SW+ +I+G+VQ EAL+LFH+M ++ P+ +L +AL+ACA L AL+QG+WIH+Y
Sbjct: 213 ISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSY 272
Query: 181 IERARIRMNERLLTIHIDM*AKCGQMEFTSKVF 279
+ + RIRM+ L + IDM AKCG+ME +VF
Sbjct: 273 LNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVF 305