BLASTX nr result
ID: Cocculus23_contig00031388
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00031388
(478 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004306275.1| PREDICTED: putative ribonuclease H protein A... 70 8e-11
ref|XP_007221701.1| hypothetical protein PRUPE_ppb013507mg [Prun... 62 2e-09
ref|XP_007226764.1| hypothetical protein PRUPE_ppa018732mg [Prun... 54 3e-09
ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787... 55 6e-09
ref|XP_007212990.1| hypothetical protein PRUPE_ppa022585mg, part... 66 6e-09
ref|XP_004298011.1| PREDICTED: uncharacterized protein LOC101296... 65 1e-08
ref|XP_007207609.1| hypothetical protein PRUPE_ppa018907mg, part... 59 1e-08
ref|XP_007219379.1| hypothetical protein PRUPE_ppa020102mg [Prun... 65 1e-08
ref|XP_006575357.1| PREDICTED: uncharacterized protein LOC102661... 54 3e-08
ref|XP_006575358.1| PREDICTED: uncharacterized protein LOC102661... 54 3e-08
ref|XP_006575359.1| PREDICTED: uncharacterized protein LOC102661... 54 3e-08
ref|XP_004293076.1| PREDICTED: putative ribonuclease H protein A... 61 3e-08
ref|XP_004287420.1| PREDICTED: uncharacterized protein LOC101302... 51 3e-08
ref|XP_004305406.1| PREDICTED: putative ribonuclease H protein A... 60 8e-08
ref|XP_004292219.1| PREDICTED: putative ribonuclease H protein A... 58 8e-08
ref|XP_004308642.1| PREDICTED: putative ribonuclease H protein A... 58 1e-07
ref|XP_004305178.1| PREDICTED: putative ribonuclease H protein A... 57 2e-07
ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein A... 54 2e-07
ref|XP_004308226.1| PREDICTED: putative ribonuclease H protein A... 55 3e-07
ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein A... 55 5e-07
>ref|XP_004306275.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 727
Score = 70.1 bits (170), Expect(2) = 8e-11
Identities = 31/113 (27%), Positives = 61/113 (53%)
Frame = +3
Query: 9 KASLQVSWSPPQVNWFAINTDXXXXXXXXXXXAILRNDNGIPLIAIAGAEEPKSMIIAEA 188
K + W PP + F +N D I+RN G+P+I + S+ EA
Sbjct: 554 KTPSAIKWQPPPASTFKVNFDGSVTSSSAACGTIIRNSEGVPIITSSKNIGKASVPTTEA 613
Query: 189 TALKEGLAVAISLGISNVLIQSDSQLLVQ*ILERRSCPWRIEPILDEIFGLLQ 347
TAL++ + +A + G++ ++++ DS++++ + + S PWR++ I+++I L Q
Sbjct: 614 TALRDSILIAKNRGLTRIIVEGDSKIIIDVVNGKISTPWRLQQIIEDIKNLAQ 666
Score = 21.9 bits (45), Expect(2) = 8e-11
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2
Query: 371 HIYREANRRAD 403
HIYREAN AD
Sbjct: 675 HIYREANFAAD 685
>ref|XP_007221701.1| hypothetical protein PRUPE_ppb013507mg [Prunus persica]
gi|462418637|gb|EMJ22900.1| hypothetical protein
PRUPE_ppb013507mg [Prunus persica]
Length = 363
Score = 62.4 bits (150), Expect(2) = 2e-09
Identities = 32/111 (28%), Positives = 56/111 (50%)
Frame = +3
Query: 3 KTKASLQVSWSPPQVNWFAINTDXXXXXXXXXXXAILRNDNGIPLIAIAGAEEPKSMIIA 182
K+ + + W PP ++W +N D ++R+ NG +A S+ +A
Sbjct: 169 KSTGKVNIKWEPPPLDWVKVNFDGSVRGNLAATGFVIRDWNGNVRLAGTKNSGQVSITVA 228
Query: 183 EATALKEGLAVAISLGISNVLIQSDSQLLVQ*ILERRSCPWRIEPILDEIF 335
E AL++GLA AI G +L++ DS+L++ I S PW I ++ +I+
Sbjct: 229 ECLALRDGLAHAIHKGWQKILVEGDSKLIIDCINNLISVPWSISLLVQDIW 279
Score = 25.0 bits (53), Expect(2) = 2e-09
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +2
Query: 329 DIWVTST-SG*LKIKHIYREANRRADWLAS 415
DIW+ S+ + KHI+ EAN AD +AS
Sbjct: 277 DIWLLSSYCEEISFKHIFWEANFTADAVAS 306
>ref|XP_007226764.1| hypothetical protein PRUPE_ppa018732mg [Prunus persica]
gi|462423700|gb|EMJ27963.1| hypothetical protein
PRUPE_ppa018732mg [Prunus persica]
Length = 430
Score = 54.3 bits (129), Expect(2) = 3e-09
Identities = 31/105 (29%), Positives = 49/105 (46%)
Frame = +3
Query: 30 WSPPQVNWFAINTDXXXXXXXXXXXAILRNDNGIPLIAIAGAEEPKSMIIAEATALKEGL 209
W P++ W +NTD +LR+ G P+ A + + E A+ GL
Sbjct: 267 WKKPELGWTKLNTDGSVDRENAGYGGLLRDYKGDPICAFVSKALGDDIFLVELWAIWRGL 326
Query: 210 AVAISLGISNVLIQSDSQLLVQ*ILERRSCPWRIEPILDEIFGLL 344
+A+SLGI + ++SDS+ +VQ I R + L I+ LL
Sbjct: 327 VLALSLGIKVIWVESDSESVVQTINRDRPYSQKASSCLKHIWELL 371
Score = 32.7 bits (73), Expect(2) = 3e-09
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 362 KIKHIYREANRRADWLASHLVVFGRMVFCPFDIPQDL 472
++ H +RE NR AD L+ +++ +VF P D P L
Sbjct: 378 QVSHSWRETNRAADHLSKMVLLGSDVVFWPVDFPDSL 414
>ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787629 [Glycine max]
Length = 470
Score = 55.1 bits (131), Expect(2) = 6e-09
Identities = 29/106 (27%), Positives = 54/106 (50%)
Frame = +3
Query: 30 WSPPQVNWFAINTDXXXXXXXXXXXAILRNDNGIPLIAIAGAEEPKSMIIAEATALKEGL 209
W+ P+ W +NTD +LR+ G P+ A + +AE A+ GL
Sbjct: 308 WTKPEFGWTKLNTDGSIHSNTVSFGGLLRDYRGEPICAFVSKAPQGDVFLAELWAIWRGL 367
Query: 210 AVAISLGISNVLIQSDSQLLVQ*ILERRSCPWRIEPILDEIFGLLQ 347
+++ LGI + ++SDS +V+ + ++ CP + L++I+ LL+
Sbjct: 368 VLSLGLGIKAIWVESDSMSVVRTVNRKQLCP-KAVGYLNQIWKLLK 412
Score = 30.8 bits (68), Expect(2) = 6e-09
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 362 KIKHIYREANRRADWLASHLVVFGRMVFCPFDIPQDLA 475
+I H +RE NR AD LA ++ +V P D P L+
Sbjct: 418 QISHSWRETNRAADHLAKMDLLANDVVLSPVDFPPSLS 455
>ref|XP_007212990.1| hypothetical protein PRUPE_ppa022585mg, partial [Prunus persica]
gi|462408855|gb|EMJ14189.1| hypothetical protein
PRUPE_ppa022585mg, partial [Prunus persica]
Length = 105
Score = 65.9 bits (159), Expect = 6e-09
Identities = 34/104 (32%), Positives = 55/104 (52%)
Frame = +3
Query: 3 KTKASLQVSWSPPQVNWFAINTDXXXXXXXXXXXAILRNDNGIPLIAIAGAEEPKSMIIA 182
K + + W PP W IN D ++RN +G L+A + S+ +A
Sbjct: 2 KKDIPMVIKWHPPPTGWIKINFDGSLMNSQGSIGFVIRNCDGHVLLAGSNNVGENSINVA 61
Query: 183 EATALKEGLAVAISLGISNVLIQSDSQLLVQ*ILERRSCPWRIE 314
E+ AL +GLAVAI G ++++ DS+L++ IL++ S PW I+
Sbjct: 62 ESIALWDGLAVAIERGWDQIVVEGDSKLVIDSILKKASPPWSIQ 105
>ref|XP_004298011.1| PREDICTED: uncharacterized protein LOC101296373 [Fragaria vesca
subsp. vesca]
Length = 204
Score = 65.1 bits (157), Expect = 1e-08
Identities = 36/106 (33%), Positives = 55/106 (51%)
Frame = +3
Query: 24 VSWSPPQVNWFAINTDXXXXXXXXXXXAILRNDNGIPLIAIAGAEEPKSMIIAEATALKE 203
+ W PP NW +N D ILRN NG PL+A A ++ ++E ALK+
Sbjct: 37 IKWIPPATNWVKLNFDGSVSDASAAAGYILRNSNGNPLVAGARRLYSSNVPVSECLALKD 96
Query: 204 GLAVAISLGISNVLIQSDSQLLVQ*ILERRSCPWRIEPILDEIFGL 341
GL A +L++ DS L++ + + + PW+I+PIL +I L
Sbjct: 97 GLLAAKLFNHKILLVEGDS-LVINSLRDPANAPWKIKPILCDILHL 141
>ref|XP_007207609.1| hypothetical protein PRUPE_ppa018907mg, partial [Prunus persica]
gi|462403251|gb|EMJ08808.1| hypothetical protein
PRUPE_ppa018907mg, partial [Prunus persica]
Length = 1566
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 30/110 (27%), Positives = 54/110 (49%)
Frame = +3
Query: 3 KTKASLQVSWSPPQVNWFAINTDXXXXXXXXXXXAILRNDNGIPLIAIAGAEEPKSMIIA 182
K+ + + W PP ++W +N D ++R+ NG +A S+ +A
Sbjct: 1393 KSTGKVNIKWEPPPLDWVKVNFDGSMRGNLAATGFVIRDWNGNVRLAGTKNSGQVSITVA 1452
Query: 183 EATALKEGLAVAISLGISNVLIQSDSQLLVQ*ILERRSCPWRIEPILDEI 332
E AL++GLA AI G + ++ DS+L++ + S PW I ++ +I
Sbjct: 1453 ECFALRDGLAHAIHKGWRKIFVEGDSKLIIDCVNNLVSVPWSISLLVQDI 1502
Score = 25.4 bits (54), Expect(2) = 1e-08
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 359 LKIKHIYREANRRADWLAS 415
+ KHI+REAN AD +AS
Sbjct: 1512 ISFKHIFREANFTADAVAS 1530
>ref|XP_007219379.1| hypothetical protein PRUPE_ppa020102mg [Prunus persica]
gi|462415841|gb|EMJ20578.1| hypothetical protein
PRUPE_ppa020102mg [Prunus persica]
Length = 175
Score = 64.7 bits (156), Expect = 1e-08
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 2/145 (1%)
Frame = +3
Query: 24 VSWSPPQVNWFAINTDXXXXXXXXXXXAILRNDNGIPLIAIAGAEEPKSMIIAEATALKE 203
+ W PP + W+ I D ++R+DN ++A A S+I+AE L++
Sbjct: 31 IKWLPPPLGWYKIKFDGSVRCSHAAIGFVIRDDNAHVVLAGAKKIGCNSIIVAECLTLRD 90
Query: 204 GLA--VAISLGISNVLIQSDSQLLVQ*ILERRSCPWRIEPILDEIFGLLQLVGN*KLNIF 377
LA V+IS G S +L++ DS+L++ +L+R S PW I ++ +I L +
Sbjct: 91 DLAYVVSISKGWSKLLVEGDSKLVIDSVLKRCSTPWCINQLVQDILHLRTFCDQVSFSHV 150
Query: 378 IEKPTAVLIG*LVTLLFLVGWCFAL 452
+ AV+ L W F+L
Sbjct: 151 FREANAVVNA-------LASWSFSL 168
>ref|XP_006575357.1| PREDICTED: uncharacterized protein LOC102661917 isoform X1 [Glycine
max]
Length = 470
Score = 54.3 bits (129), Expect(2) = 3e-08
Identities = 29/106 (27%), Positives = 53/106 (50%)
Frame = +3
Query: 30 WSPPQVNWFAINTDXXXXXXXXXXXAILRNDNGIPLIAIAGAEEPKSMIIAEATALKEGL 209
W+ P+ W +NTD +LR+ G P+ A + +AE A+ GL
Sbjct: 308 WTKPEFGWTKLNTDGSIHSNTASFGGLLRDYRGEPICAFVSKAPQGDIFLAELWAMWRGL 367
Query: 210 AVAISLGISNVLIQSDSQLLVQ*ILERRSCPWRIEPILDEIFGLLQ 347
+++ LGI + ++SDS +V+ + ++ CP + L +I+ LL+
Sbjct: 368 VLSLGLGIKAIWVESDSMSVVKTVNRKQFCP-KAVGYLKQIWKLLK 412
Score = 29.3 bits (64), Expect(2) = 3e-08
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 362 KIKHIYREANRRADWLASHLVVFGRMVFCPFDIPQDL 472
+I H +R+ NR AD LA ++ +V P D P L
Sbjct: 418 QISHTWRQTNRAADHLAKMDLLANDVVLWPVDFPPSL 454
>ref|XP_006575358.1| PREDICTED: uncharacterized protein LOC102661917 isoform X2 [Glycine
max]
Length = 441
Score = 54.3 bits (129), Expect(2) = 3e-08
Identities = 29/106 (27%), Positives = 53/106 (50%)
Frame = +3
Query: 30 WSPPQVNWFAINTDXXXXXXXXXXXAILRNDNGIPLIAIAGAEEPKSMIIAEATALKEGL 209
W+ P+ W +NTD +LR+ G P+ A + +AE A+ GL
Sbjct: 279 WTKPEFGWTKLNTDGSIHSNTASFGGLLRDYRGEPICAFVSKAPQGDIFLAELWAMWRGL 338
Query: 210 AVAISLGISNVLIQSDSQLLVQ*ILERRSCPWRIEPILDEIFGLLQ 347
+++ LGI + ++SDS +V+ + ++ CP + L +I+ LL+
Sbjct: 339 VLSLGLGIKAIWVESDSMSVVKTVNRKQFCP-KAVGYLKQIWKLLK 383
Score = 29.3 bits (64), Expect(2) = 3e-08
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 362 KIKHIYREANRRADWLASHLVVFGRMVFCPFDIPQDL 472
+I H +R+ NR AD LA ++ +V P D P L
Sbjct: 389 QISHTWRQTNRAADHLAKMDLLANDVVLWPVDFPPSL 425
>ref|XP_006575359.1| PREDICTED: uncharacterized protein LOC102661917 isoform X3 [Glycine
max]
Length = 414
Score = 54.3 bits (129), Expect(2) = 3e-08
Identities = 29/106 (27%), Positives = 53/106 (50%)
Frame = +3
Query: 30 WSPPQVNWFAINTDXXXXXXXXXXXAILRNDNGIPLIAIAGAEEPKSMIIAEATALKEGL 209
W+ P+ W +NTD +LR+ G P+ A + +AE A+ GL
Sbjct: 252 WTKPEFGWTKLNTDGSIHSNTASFGGLLRDYRGEPICAFVSKAPQGDIFLAELWAMWRGL 311
Query: 210 AVAISLGISNVLIQSDSQLLVQ*ILERRSCPWRIEPILDEIFGLLQ 347
+++ LGI + ++SDS +V+ + ++ CP + L +I+ LL+
Sbjct: 312 VLSLGLGIKAIWVESDSMSVVKTVNRKQFCP-KAVGYLKQIWKLLK 356
Score = 29.3 bits (64), Expect(2) = 3e-08
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 362 KIKHIYREANRRADWLASHLVVFGRMVFCPFDIPQDL 472
+I H +R+ NR AD LA ++ +V P D P L
Sbjct: 362 QISHTWRQTNRAADHLAKMDLLANDVVLWPVDFPPSL 398
>ref|XP_004293076.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 487
Score = 60.8 bits (146), Expect(2) = 3e-08
Identities = 34/106 (32%), Positives = 54/106 (50%)
Frame = +3
Query: 15 SLQVSWSPPQVNWFAINTDXXXXXXXXXXXAILRNDNGIPLIAIAGAEEPKSMIIAEATA 194
S + W PP N+ IN D + RN +G ++A A ++ AEATA
Sbjct: 316 SSTIRWLPPHNNFIKINFDGSVQGRSAAGGFVFRNSDGNVILAAAKGLGSTTIPTAEATA 375
Query: 195 LKEGLAVAISLGISNVLIQSDSQLLVQ*ILERRSCPWRIEPILDEI 332
L++ L A G NV ++ DS+L++ I + S PWR++ I+ +I
Sbjct: 376 LRDSLVKARDRGYMNVQVEGDSKLVIDAINGKLSPPWRLQKIVQDI 421
Score = 22.3 bits (46), Expect(2) = 3e-08
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 371 HIYREANRRADWLAS 415
H+YREAN AD A+
Sbjct: 435 HVYREANFMADAFAN 449
>ref|XP_004287420.1| PREDICTED: uncharacterized protein LOC101302388 [Fragaria vesca
subsp. vesca]
Length = 425
Score = 50.8 bits (120), Expect(2) = 3e-08
Identities = 32/106 (30%), Positives = 47/106 (44%)
Frame = +3
Query: 30 WSPPQVNWFAINTDXXXXXXXXXXXAILRNDNGIPLIAIAGAEEPKSMIIAEATALKEGL 209
W PQV W +NTD +LRN G P+ A + E A+ GL
Sbjct: 262 WKKPQVGWTKLNTDGSVDPGNAGFGGLLRNYKGEPICAFVSKALGDDTFLVELWAIWRGL 321
Query: 210 AVAISLGISNVLIQSDSQLLVQ*ILERRSCPWRIEPILDEIFGLLQ 347
+A SLGI + ++SDS +V+ I + + L I+ LL+
Sbjct: 322 ILASSLGIKVLWVESDSLSVVKTINRDQPYSLKASSCLKHIWELLK 367
Score = 32.3 bits (72), Expect(2) = 3e-08
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 362 KIKHIYREANRRADWLASHLVVFGRMVFCPFDIPQDL 472
++ H +RE NR AD LA ++ +VF P D P L
Sbjct: 373 RVSHSWRETNRAADHLAKMVLSESDVVFWPGDFPDSL 409
>ref|XP_004305406.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 399
Score = 60.5 bits (145), Expect(2) = 8e-08
Identities = 33/103 (32%), Positives = 53/103 (51%)
Frame = +3
Query: 24 VSWSPPQVNWFAINTDXXXXXXXXXXXAILRNDNGIPLIAIAGAEEPKSMIIAEATALKE 203
+ W PP N+ IN D + RN +G ++A A ++ AEATAL++
Sbjct: 227 IRWLPPHNNFIKINFDGSVQGRSAVGGFVFRNSDGNVILAAAKGLGSTTIPTAEATALRD 286
Query: 204 GLAVAISLGISNVLIQSDSQLLVQ*ILERRSCPWRIEPILDEI 332
L A G NV ++ DS+L++ I + S PWR++ I+ +I
Sbjct: 287 NLVKARDRGYMNVQVEGDSKLVIDAINGKLSPPWRLQKIVQDI 329
Score = 21.6 bits (44), Expect(2) = 8e-08
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 371 HIYREANRRADWLAS 415
H+YREAN AD A+
Sbjct: 343 HVYREANFVADAFAN 357
>ref|XP_004292219.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 170
Score = 58.2 bits (139), Expect(2) = 8e-08
Identities = 29/103 (28%), Positives = 52/103 (50%)
Frame = +3
Query: 24 VSWSPPQVNWFAINTDXXXXXXXXXXXAILRNDNGIPLIAIAGAEEPKSMIIAEATALKE 203
+ W+PP NW IN D +LR+++G PL++ A ++ +AEA L+
Sbjct: 2 IRWTPPPSNWVKINFDDSVQNKAAAGGFVLRSNDGKPLVSAAFNSGTANVPLAEALTLRN 61
Query: 204 GLAVAISLGISNVLIQSDSQLLVQ*ILERRSCPWRIEPILDEI 332
L A G+ V ++ DS+L++ + PWR+ ++ +I
Sbjct: 62 NLLCAKEKGVLKVEVEGDSKLIIDIVNGVCDLPWRLLKVVQDI 104
Score = 23.9 bits (50), Expect(2) = 8e-08
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +2
Query: 359 LKIKHIYREANRRADWLAS--HLVVFGRM 439
++ KH++REAN A+ LA+ H V R+
Sbjct: 114 IRFKHVFREANFVANALANLGHRVQISRL 142
>ref|XP_004308642.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 214
Score = 57.8 bits (138), Expect(2) = 1e-07
Identities = 31/103 (30%), Positives = 54/103 (52%)
Frame = +3
Query: 24 VSWSPPQVNWFAINTDXXXXXXXXXXXAILRNDNGIPLIAIAGAEEPKSMIIAEATALKE 203
++W P IN D AI+R+ G P++A S+ +AEATAL++
Sbjct: 74 ITWLSPPNKTVKINFDGSVSSNSAASGAIIRDSKGNPILASTRNLGSTSVPVAEATALRD 133
Query: 204 GLAVAISLGISNVLIQSDSQLLVQ*ILERRSCPWRIEPILDEI 332
L G +V+++ DS+L++ + ++ + PWRI I+D+I
Sbjct: 134 SLLSVKEKGFIDVVVEGDSKLVIDVMTQKINPPWRIHQIVDDI 176
Score = 23.5 bits (49), Expect(2) = 1e-07
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 359 LKIKHIYREANRRADWLASH 418
+ H+YREAN AD + S+
Sbjct: 186 ISFHHVYREANFAADAVVSY 205
>ref|XP_004305178.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 305
Score = 57.0 bits (136), Expect(2) = 2e-07
Identities = 30/103 (29%), Positives = 51/103 (49%)
Frame = +3
Query: 24 VSWSPPQVNWFAINTDXXXXXXXXXXXAILRNDNGIPLIAIAGAEEPKSMIIAEATALKE 203
+ W+PP NW IN D +LR+D+G PL++ A S+ +AEA +
Sbjct: 137 IRWTPPLSNWVKINFDGSVQNKAAAGGFVLRSDDGKPLVSAAFNSGTASVPLAEALEFRN 196
Query: 204 GLAVAISLGISNVLIQSDSQLLVQ*ILERRSCPWRIEPILDEI 332
L A G+ V ++ DS+L++ + PWR+ ++ +I
Sbjct: 197 SLLCAKEKGVLKVEVEGDSKLIIDIMNGVCDPPWRLLKVVKDI 239
Score = 23.9 bits (50), Expect(2) = 2e-07
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +2
Query: 359 LKIKHIYREANRRADWLAS 415
+++KH++REAN A+ LA+
Sbjct: 249 IRLKHVFREANFVANALAN 267
>ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 316
Score = 54.3 bits (129), Expect(2) = 2e-07
Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Frame = +3
Query: 21 QVSWSPPQVNWFAINTDXXXXXXXXXXXA--ILRNDNGIPLIAIAGAEEPKSMIIAEATA 194
+V+W+ P W INTD A ILR+ G ++A A + S AE A
Sbjct: 136 KVAWNRPPEEWIKINTDGSAINNPGKIGAGGILRDTEGRLVLAFATSLGEGSNNQAEMEA 195
Query: 195 LKEGLAVAISLGISNVLIQSDSQLLVQ*ILERRSCPWRIEPILDEIFGLLQ 347
+ GL+ AI L N++++ DSQ++VQ I ++ + W + L++I L+Q
Sbjct: 196 AQFGLSWAIDLDYRNIILEVDSQIVVQWITKKTTHHWSVSNQLEKIQQLIQ 246
Score = 26.2 bits (56), Expect(2) = 2e-07
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 362 KIKHIYREANRRADWLASH 418
K +HI+REAN AD L+ H
Sbjct: 252 KCEHIFREANWTADSLSKH 270
>ref|XP_004308226.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 179
Score = 55.1 bits (131), Expect(2) = 3e-07
Identities = 31/99 (31%), Positives = 50/99 (50%)
Frame = +3
Query: 36 PPQVNWFAINTDXXXXXXXXXXXAILRNDNGIPLIAIAGAEEPKSMIIAEATALKEGLAV 215
PP NW IN D +LR+D+G PL++ A S+ +AEA AL+ L
Sbjct: 15 PPPSNWVKINFDGSVRNKAAARGFVLRSDDGKPLVSAAFNSGNASVPLAEALALRNSLFC 74
Query: 216 AISLGISNVLIQSDSQLLVQ*ILERRSCPWRIEPILDEI 332
A G+ V ++ DS+L++ + PWR+ ++ +I
Sbjct: 75 AKEKGVLKVEMEGDSKLIIDIVNGVCDPPWRLLKVVQDI 113
Score = 25.0 bits (53), Expect(2) = 3e-07
Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +2
Query: 359 LKIKHIYREANRRADWLAS--HLVVFGRM 439
++ KH+++EAN A+ LA+ H V F R+
Sbjct: 123 IRFKHVFKEANFVANALANLGHRVEFSRL 151
>ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 308
Score = 54.7 bits (130), Expect(2) = 5e-07
Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Frame = +3
Query: 24 VSWSPPQVNWFAINTDXXXXXXXXXXXA--ILRNDNGIPLIAIAGAEEPKSMIIAEATAL 197
V+W+ P W INTD A ILR+ G ++A A S AE A
Sbjct: 129 VAWNRPPEQWIKINTDGSALTNLGQIGAGGILRDREGKMVLAFATPLGEGSNNKAETAAA 188
Query: 198 KEGLAVAISLGISNVLIQSDSQLLVQ*ILERRSCPWRIEPILDEIFGLLQLVGN*K 365
GL+ A+ LG N+LI+ DSQL+VQ I ++ + W + ++ I L+ N K
Sbjct: 189 LFGLSWALELGYRNILIELDSQLVVQWISKKTAPHWSVTKQIERIQHLIMQTQNFK 244
Score = 24.6 bits (52), Expect(2) = 5e-07
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 362 KIKHIYREANRRADWLASH 418
K HI+REAN AD L+ H
Sbjct: 244 KCTHIFREANWVADSLSKH 262