BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00031344
         (381 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]   129   6e-28
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]   129   6e-28
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]   124   2e-26
emb|CAN60844.1| hypothetical protein VITISV_005976 [Vitis vinifera]   122   5e-26
ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624...   121   9e-26
emb|CAN82452.1| hypothetical protein VITISV_003326 [Vitis vinifera]   121   9e-26
emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]   121   1e-25
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|...   120   3e-25
gb|AAB82754.1| retrofit [Oryza longistaminata]                        119   3e-25
emb|CAN67247.1| hypothetical protein VITISV_008682 [Vitis vinifera]   119   4e-25
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]   119   6e-25
emb|CAN66884.1| hypothetical protein VITISV_000961 [Vitis vinifera]   119   6e-25
gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subc...   118   1e-24
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]              117   1e-24
gb|AAP94600.1| putative copia-like retrotransposon Hopscotch pol...   117   2e-24
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop...   117   2e-24
gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [...   117   2e-24
emb|CAN68496.1| hypothetical protein VITISV_010947 [Vitis vinifera]   117   2e-24
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  116   3e-24
emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]   116   3e-24

>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score =  129 bits (323), Expect = 6e-28
 Identities = 53/90 (58%), Positives = 74/90 (82%)
 Frame = +2

Query: 2   NRLPSPILQFTSPFQLLYNKALDYSLFKVFGCLCFPYLRPYNRHKLQFRSTKCAFFGYST 181
           NRLP+ +L + SPFQ+L+ K+ +Y +FK+FGCLC+PY+RPYN++KL +RS++C F GYS+
Sbjct: 716 NRLPTKVLNYQSPFQILFGKSPNYHIFKIFGCLCYPYIRPYNKNKLSYRSSQCVFLGYSS 775

Query: 182 SHKGYLGLDLSSQRLYVTRHVVFDEYTFPF 271
           +HKGY+ L+  + RLYVTRHVVF E  FPF
Sbjct: 776 NHKGYMCLNPLTGRLYVTRHVVFHETVFPF 805


>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
          Length = 1271

 Score =  129 bits (323), Expect = 6e-28
 Identities = 53/90 (58%), Positives = 74/90 (82%)
 Frame = +2

Query: 2   NRLPSPILQFTSPFQLLYNKALDYSLFKVFGCLCFPYLRPYNRHKLQFRSTKCAFFGYST 181
           NRLP+ +L + SPFQ+L+ K+ +Y +FK+FGCLC+PY+RPYN++KL +RS++C F GYS+
Sbjct: 525 NRLPTKVLNYQSPFQILFGKSPNYHIFKIFGCLCYPYIRPYNKNKLSYRSSQCVFLGYSS 584

Query: 182 SHKGYLGLDLSSQRLYVTRHVVFDEYTFPF 271
           +HKGY+ L+  + RLYVTRHVVF E  FPF
Sbjct: 585 NHKGYMCLNPLTGRLYVTRHVVFHETVFPF 614


>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
          Length = 1432

 Score =  124 bits (310), Expect = 2e-26
 Identities = 51/89 (57%), Positives = 70/89 (78%)
 Frame = +2

Query: 2   NRLPSPILQFTSPFQLLYNKALDYSLFKVFGCLCFPYLRPYNRHKLQFRSTKCAFFGYST 181
           NR+PS +L++ SP+  L+ +  DY  F+VFGCLC+P++RPYN HKLQ+RS +C F GYS 
Sbjct: 685 NRMPSKVLEYDSPYFTLFRRHPDYKSFRVFGCLCYPFIRPYNTHKLQYRSVQCLFLGYSL 744

Query: 182 SHKGYLGLDLSSQRLYVTRHVVFDEYTFP 268
           +HKG+L LD ++ R+Y+T HVVFDE TFP
Sbjct: 745 NHKGFLCLDYATGRVYITPHVVFDESTFP 773


>emb|CAN60844.1| hypothetical protein VITISV_005976 [Vitis vinifera]
          Length = 1380

 Score =  122 bits (306), Expect = 5e-26
 Identities = 51/89 (57%), Positives = 69/89 (77%)
 Frame = +2

Query: 2   NRLPSPILQFTSPFQLLYNKALDYSLFKVFGCLCFPYLRPYNRHKLQFRSTKCAFFGYST 181
           N +PS +L++ SP+  L+ K LDY   +VFGCLC+P++RPYN HKLQ+RS +C F GYS 
Sbjct: 475 NGMPSKVLKYDSPYFTLFRKHLDYKSLRVFGCLCYPFIRPYNTHKLQYRSVQCLFLGYSL 534

Query: 182 SHKGYLGLDLSSQRLYVTRHVVFDEYTFP 268
           +HKG+L LD ++ R+Y+T HVVFDE TFP
Sbjct: 535 NHKGFLCLDYATGRVYITPHVVFDESTFP 563


>ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624640 [Citrus sinensis]
          Length = 1682

 Score =  121 bits (304), Expect = 9e-26
 Identities = 55/90 (61%), Positives = 67/90 (74%)
 Frame = +2

Query: 2   NRLPSPILQFTSPFQLLYNKALDYSLFKVFGCLCFPYLRPYNRHKLQFRSTKCAFFGYST 181
           NRLP+P L   SP+Q L+ +  DY   +VFGC CFPYLRPYNRHKL FRS +C F GYS+
Sbjct: 119 NRLPTPTLNNISPYQKLFQQVPDYVSLRVFGCACFPYLRPYNRHKLSFRSNRCVFIGYSS 178

Query: 182 SHKGYLGLDLSSQRLYVTRHVVFDEYTFPF 271
           SHKGY  L  SS R+YV+ HV+FDE +FP+
Sbjct: 179 SHKGYQCLH-SSGRVYVSNHVIFDEQSFPY 207


>emb|CAN82452.1| hypothetical protein VITISV_003326 [Vitis vinifera]
          Length = 1139

 Score =  121 bits (304), Expect = 9e-26
 Identities = 50/89 (56%), Positives = 69/89 (77%)
 Frame = +2

Query: 2   NRLPSPILQFTSPFQLLYNKALDYSLFKVFGCLCFPYLRPYNRHKLQFRSTKCAFFGYST 181
           NR+PS +L++ SP+  L+ +  DY   +VFGCLC+P++RPYN HKLQ+RS +C F GYS 
Sbjct: 560 NRMPSKVLEYDSPYFTLFRRHPDYKSLRVFGCLCYPFIRPYNTHKLQYRSVQCLFLGYSL 619

Query: 182 SHKGYLGLDLSSQRLYVTRHVVFDEYTFP 268
           +HKG+L LD ++ R+Y+T HVVFDE TFP
Sbjct: 620 NHKGFLCLDYATGRVYITPHVVFDESTFP 648


>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
          Length = 1365

 Score =  121 bits (303), Expect = 1e-25
 Identities = 53/90 (58%), Positives = 66/90 (73%)
 Frame = +2

Query: 2   NRLPSPILQFTSPFQLLYNKALDYSLFKVFGCLCFPYLRPYNRHKLQFRSTKCAFFGYST 181
           NR+PS +LQ  SP+  L+ +  DY   +VFGCLC+P++RPYN HKLQ+RS KC F GYS 
Sbjct: 630 NRMPSKVLQNASPYFALFKRNPDYKFLRVFGCLCYPFIRPYNNHKLQYRSLKCVFLGYSL 689

Query: 182 SHKGYLGLDLSSQRLYVTRHVVFDEYTFPF 271
            HKGYL LD  + R+YV+ HVVFDE  FPF
Sbjct: 690 HHKGYLCLDNLTGRVYVSPHVVFDETQFPF 719


>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
           gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1447

 Score =  120 bits (300), Expect = 3e-25
 Identities = 52/90 (57%), Positives = 68/90 (75%)
 Frame = +2

Query: 2   NRLPSPILQFTSPFQLLYNKALDYSLFKVFGCLCFPYLRPYNRHKLQFRSTKCAFFGYST 181
           NR P+ +LQF +P + L+N+  DYS  +VFGC C+P+LRPYN HKLQFRS +C F GYST
Sbjct: 653 NRTPTKLLQFLTPLEHLFNQTPDYSSLRVFGCACWPHLRPYNTHKLQFRSKQCTFLGYST 712

Query: 182 SHKGYLGLDLSSQRLYVTRHVVFDEYTFPF 271
            HKG+  LD S+ R+Y++R V+FDE  FPF
Sbjct: 713 LHKGFKCLDPSTGRVYISRDVIFDETNFPF 742


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score =  119 bits (299), Expect = 3e-25
 Identities = 52/90 (57%), Positives = 69/90 (76%)
 Frame = +2

Query: 2   NRLPSPILQFTSPFQLLYNKALDYSLFKVFGCLCFPYLRPYNRHKLQFRSTKCAFFGYST 181
           NR+PS  +Q ++P + L+N+  DYS  +VFGC C+P+LRPYN HKLQFRS +C F G+ST
Sbjct: 653 NRIPSKTIQNSTPLEKLFNQKPDYSSLRVFGCACWPHLRPYNTHKLQFRSKQCVFLGFST 712

Query: 182 SHKGYLGLDLSSQRLYVTRHVVFDEYTFPF 271
            HKG+  LD+SS R+Y++R VVFDE  FPF
Sbjct: 713 HHKGFKCLDVSSGRVYISRDVVFDENVFPF 742


>emb|CAN67247.1| hypothetical protein VITISV_008682 [Vitis vinifera]
          Length = 1270

 Score =  119 bits (298), Expect = 4e-25
 Identities = 51/90 (56%), Positives = 69/90 (76%)
 Frame = +2

Query: 2   NRLPSPILQFTSPFQLLYNKALDYSLFKVFGCLCFPYLRPYNRHKLQFRSTKCAFFGYST 181
           N LP+ +L F SP Q+L++K  +Y   +VFGCLCFP LRPYN HKL +RST C F GY++
Sbjct: 568 NLLPTKLLNFQSPLQVLFHKIPNYHHLRVFGCLCFPSLRPYNHHKLSYRSTACVFLGYAS 627

Query: 182 SHKGYLGLDLSSQRLYVTRHVVFDEYTFPF 271
           +HKGY+ LD+S+ RLY++R V+F E +FPF
Sbjct: 628 AHKGYICLDVSTSRLYISRDVLFHESSFPF 657


>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
          Length = 1402

 Score =  119 bits (297), Expect = 6e-25
 Identities = 52/90 (57%), Positives = 65/90 (72%)
 Frame = +2

Query: 2   NRLPSPILQFTSPFQLLYNKALDYSLFKVFGCLCFPYLRPYNRHKLQFRSTKCAFFGYST 181
           NR+PS +L   SP+  L+ +  DY   +VFGCLC+P++RPYN HKLQ+RS KC F GYS 
Sbjct: 680 NRMPSKVLXNASPYFALFKRNPDYKFLRVFGCLCYPFIRPYNNHKLQYRSLKCVFLGYSL 739

Query: 182 SHKGYLGLDLSSQRLYVTRHVVFDEYTFPF 271
            HKGYL LD  + R+YV+ HVVFDE  FPF
Sbjct: 740 HHKGYLCLDNLTGRVYVSPHVVFDETQFPF 769


>emb|CAN66884.1| hypothetical protein VITISV_000961 [Vitis vinifera]
          Length = 685

 Score =  119 bits (297), Expect = 6e-25
 Identities = 59/122 (48%), Positives = 75/122 (61%)
 Frame = +2

Query: 2   NRLPSPILQFTSPFQLLYNKALDYSLFKVFGCLCFPYLRPYNRHKLQFRSTKCAFFGYST 181
           NRLP+PIL+   P +LL+    +YS  KVFGC C+P  RP+N+HKLQFRST C F GYS 
Sbjct: 333 NRLPTPILKQKCPLELLFKTKPNYSFLKVFGCACYPNTRPFNKHKLQFRSTVCTFMGYSL 392

Query: 182 SHKGYLGLDLSSQRLYVTRHVVFDEYTFPFXXXXXXXXXXXXXXXXXXXFVSYCPL*MTV 361
           +HKGY  LD S+ +LY++R V+FDE TFPF                     S  PL +TV
Sbjct: 393 NHKGYKRLD-SNGKLYISRDVIFDETTFPFAQIDQSSYSIHNSSSLSNSIPSASPLILTV 451

Query: 362 PT 367
           P+
Sbjct: 452 PS 453


>gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1145

 Score =  118 bits (295), Expect = 1e-24
 Identities = 51/90 (56%), Positives = 69/90 (76%)
 Frame = +2

Query: 2   NRLPSPILQFTSPFQLLYNKALDYSLFKVFGCLCFPYLRPYNRHKLQFRSTKCAFFGYST 181
           NR+PS ++Q T+P +  +++  DYS  +VFGC C+P LRPYN+HKLQFRS +CAF G+S 
Sbjct: 523 NRVPSRVIQNTTPLEKFFHQKPDYSSLRVFGCACWPNLRPYNKHKLQFRSKRCAFLGFSN 582

Query: 182 SHKGYLGLDLSSQRLYVTRHVVFDEYTFPF 271
            HKG+  LD+SS R+Y++R VVFDE  FPF
Sbjct: 583 MHKGFKCLDISSGRVYISRDVVFDENIFPF 612


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score =  117 bits (294), Expect = 1e-24
 Identities = 51/90 (56%), Positives = 66/90 (73%)
 Frame = +2

Query: 2   NRLPSPILQFTSPFQLLYNKALDYSLFKVFGCLCFPYLRPYNRHKLQFRSTKCAFFGYST 181
           NRLPS +L + SP++ L+++   Y   KVFGC CFPYLRPYN  KLQ RS +C F GYS 
Sbjct: 597 NRLPSRVLNYASPYEQLFHRVPQYHSLKVFGCACFPYLRPYNSSKLQLRSKRCVFLGYSL 656

Query: 182 SHKGYLGLDLSSQRLYVTRHVVFDEYTFPF 271
           +H+GY   D SS R+Y++RHV+FDE +FPF
Sbjct: 657 NHQGYRCFDPSSGRVYLSRHVLFDESSFPF 686


>gb|AAP94600.1| putative copia-like retrotransposon Hopscotch polyprotein [Zea
           mays]
          Length = 969

 Score =  117 bits (292), Expect = 2e-24
 Identities = 51/90 (56%), Positives = 68/90 (75%)
 Frame = +2

Query: 2   NRLPSPILQFTSPFQLLYNKALDYSLFKVFGCLCFPYLRPYNRHKLQFRSTKCAFFGYST 181
           NR P+ IL   +PF+ L++K  DYS+ ++FGC+C+P LRPYN HKLQFRS +C F GYS+
Sbjct: 500 NRTPTKILNLDTPFERLFHKQPDYSVLRIFGCVCWPNLRPYNSHKLQFRSKQCVFLGYSS 559

Query: 182 SHKGYLGLDLSSQRLYVTRHVVFDEYTFPF 271
            HKG+  LD+S+ R+YV+R V FDE  FPF
Sbjct: 560 LHKGFKCLDVSTGRVYVSRDVTFDENFFPF 589


>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea
           mays]
          Length = 1313

 Score =  117 bits (292), Expect = 2e-24
 Identities = 51/90 (56%), Positives = 68/90 (75%)
 Frame = +2

Query: 2   NRLPSPILQFTSPFQLLYNKALDYSLFKVFGCLCFPYLRPYNRHKLQFRSTKCAFFGYST 181
           NR P+ IL   +PF+ L++K  DYS+ ++FGC+C+P LRPYN HKLQFRS +C F GYS+
Sbjct: 500 NRTPTKILNLDTPFERLFHKQPDYSVLRIFGCVCWPNLRPYNSHKLQFRSKQCVFLGYSS 559

Query: 182 SHKGYLGLDLSSQRLYVTRHVVFDEYTFPF 271
            HKG+  LD+S+ R+YV+R V FDE  FPF
Sbjct: 560 LHKGFKCLDVSTGRVYVSRDVTFDENFFPF 589


>gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [Oryza sativa
           Japonica Group] gi|31431217|gb|AAP53032.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 1042

 Score =  117 bits (292), Expect = 2e-24
 Identities = 51/89 (57%), Positives = 66/89 (74%)
 Frame = +2

Query: 2   NRLPSPILQFTSPFQLLYNKALDYSLFKVFGCLCFPYLRPYNRHKLQFRSTKCAFFGYST 181
           NR+PS ILQ+ +P + L+N  LDYS F++FGC C+P LRPYN HKLQFRS +C F G S 
Sbjct: 546 NRIPSRILQYDTPLECLFNHKLDYSSFRIFGCACWPNLRPYNAHKLQFRSMQCVFLGPSH 605

Query: 182 SHKGYLGLDLSSQRLYVTRHVVFDEYTFP 268
           +H GY  LD+++ R+Y+ R VVFDE  FP
Sbjct: 606 THNGYKCLDIATGRIYICRDVVFDENVFP 634


>emb|CAN68496.1| hypothetical protein VITISV_010947 [Vitis vinifera]
          Length = 1539

 Score =  117 bits (292), Expect = 2e-24
 Identities = 50/90 (55%), Positives = 68/90 (75%)
 Frame = +2

Query: 2    NRLPSPILQFTSPFQLLYNKALDYSLFKVFGCLCFPYLRPYNRHKLQFRSTKCAFFGYST 181
            N LP+ +L F SP Q+L++K  +Y   +VF CLCFP LRPYN HKL +RST C F GY++
Sbjct: 844  NLLPAKLLNFQSPLQVLFHKIPNYHHLRVFACLCFPSLRPYNHHKLSYRSTACVFLGYAS 903

Query: 182  SHKGYLGLDLSSQRLYVTRHVVFDEYTFPF 271
            +HKGY+ LD+S+ RLY++R V+F E +FPF
Sbjct: 904  AHKGYICLDVSTSRLYISRDVLFHESSFPF 933


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  116 bits (291), Expect = 3e-24
 Identities = 51/90 (56%), Positives = 68/90 (75%)
 Frame = +2

Query: 2   NRLPSPILQFTSPFQLLYNKALDYSLFKVFGCLCFPYLRPYNRHKLQFRSTKCAFFGYST 181
           NR+PS  +Q ++P + L+N+  DY   +VFGC C+P+LRPYN HKLQFRS +C F G+ST
Sbjct: 653 NRVPSKTIQNSTPLEKLFNQKPDYLSLRVFGCACWPHLRPYNTHKLQFRSKQCVFLGFST 712

Query: 182 SHKGYLGLDLSSQRLYVTRHVVFDEYTFPF 271
            HKG+  LD+SS R+Y++R VVFDE  FPF
Sbjct: 713 HHKGFKCLDVSSGRVYISRDVVFDENIFPF 742


>emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]
          Length = 920

 Score =  116 bits (291), Expect = 3e-24
 Identities = 48/89 (53%), Positives = 68/89 (76%)
 Frame = +2

Query: 2   NRLPSPILQFTSPFQLLYNKALDYSLFKVFGCLCFPYLRPYNRHKLQFRSTKCAFFGYST 181
           NR+ S +L++ SP+  L+ +  DY   +VFGCLC+P+++PYN HKLQ+RS +C F GYS 
Sbjct: 488 NRMXSKVLEYDSPYFTLFRRHPDYKSLRVFGCLCYPFIQPYNTHKLQYRSVQCFFLGYSL 547

Query: 182 SHKGYLGLDLSSQRLYVTRHVVFDEYTFP 268
           +HKG+L LD ++ R+Y+T HVVFDE TFP
Sbjct: 548 NHKGFLCLDYATGRVYITPHVVFDESTFP 576