BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00031225
         (226 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006475766.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07
ref|XP_006451033.1| hypothetical protein CICLE_v10010814mg, part...    60   2e-07
ref|NP_189568.1| pentatricopeptide repeat-containing protein [Ar...    60   3e-07
gb|EXC04260.1| hypothetical protein L484_002345 [Morus notabilis]      59   7e-07
ref|NP_188283.1| pentatricopeptide repeat-containing protein [Ar...    59   7e-07
emb|CBI28135.3| unnamed protein product [Vitis vinifera]               59   7e-07
ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containi...    59   7e-07
ref|XP_002875497.1| pentatricopeptide repeat-containing protein ...    58   1e-06
ref|XP_004289579.1| PREDICTED: putative pentatricopeptide repeat...    58   2e-06
ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...    58   2e-06
ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat...    58   2e-06
ref|XP_006464333.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06
ref|XP_006352207.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06
ref|XP_006445525.1| hypothetical protein CICLE_v10019817mg [Citr...    57   2e-06
ref|XP_004503024.1| PREDICTED: putative pentatricopeptide repeat...    57   2e-06
ref|XP_002885157.1| pentatricopeptide repeat-containing protein ...    57   2e-06
ref|XP_006431157.1| hypothetical protein CICLE_v10011507mg [Citr...    57   3e-06
ref|XP_006395295.1| hypothetical protein EUTSA_v10003866mg [Eutr...    57   3e-06
ref|XP_002310258.2| pentatricopeptide repeat-containing family p...    57   3e-06
ref|XP_002318314.2| hypothetical protein POPTR_0012s03810g [Popu...    57   3e-06

>ref|XP_006475766.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like isoform X1 [Citrus sinensis]
          Length = 840

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 28/49 (57%), Positives = 37/49 (75%)
 Frame = -3

Query: 221 HGLAMEALNLFS*MQRVGISPDSVTLTHVLCACSHAGMVTVGLQVLYEM 75
           HGLA+EAL LF  +Q+ GI PDS+T T++L ACSHAG+V  GL++   M
Sbjct: 634 HGLAVEALALFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLELFVGM 682


>ref|XP_006451033.1| hypothetical protein CICLE_v10010814mg, partial [Citrus clementina]
           gi|557554259|gb|ESR64273.1| hypothetical protein
           CICLE_v10010814mg, partial [Citrus clementina]
          Length = 830

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 28/49 (57%), Positives = 37/49 (75%)
 Frame = -3

Query: 221 HGLAMEALNLFS*MQRVGISPDSVTLTHVLCACSHAGMVTVGLQVLYEM 75
           HGLA+EAL LF  +Q+ GI PDS+T T++L ACSHAG+V  GL++   M
Sbjct: 634 HGLAVEALALFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLELFVGM 682


>ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g29230 gi|9293916|dbj|BAB01819.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332644032|gb|AEE77553.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 600

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 27/52 (51%), Positives = 34/52 (65%)
 Frame = -3

Query: 221 HGLAMEALNLFS*MQRVGISPDSVTLTHVLCACSHAGMVTVGLQVLYEMSKV 66
           HG   EA+ LFS M+R GI PD VT   VLC+C+HAG++  G+   Y M KV
Sbjct: 394 HGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKV 445


>gb|EXC04260.1| hypothetical protein L484_002345 [Morus notabilis]
          Length = 1455

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 26/52 (50%), Positives = 36/52 (69%)
 Frame = -3

Query: 221  HGLAMEALNLFS*MQRVGISPDSVTLTHVLCACSHAGMVTVGLQVLYEMSKV 66
            HG+  EAL +FS M  +G+ PD V +T VL ACSHAG+++ GL+  Y + KV
Sbjct: 1028 HGMGKEALGIFSHMLEMGLKPDHVIITAVLSACSHAGLMSEGLETFYSIEKV 1079


>ref|NP_188283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75274288|sp|Q9LUS3.1|PP237_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g16610 gi|11994615|dbj|BAB02752.1| selenium-binding
           protein-like [Arabidopsis thaliana]
           gi|332642322|gb|AEE75843.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 27/51 (52%), Positives = 36/51 (70%)
 Frame = -3

Query: 221 HGLAMEALNLFS*MQRVGISPDSVTLTHVLCACSHAGMVTVGLQVLYEMSK 69
           HGL  EAL+LF+ MQ  G++PD VTL  +L ACSH+G+V  G Q+   MS+
Sbjct: 488 HGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSR 538


>emb|CBI28135.3| unnamed protein product [Vitis vinifera]
          Length = 1974

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 27/49 (55%), Positives = 35/49 (71%)
 Frame = -3

Query: 221  HGLAMEALNLFS*MQRVGISPDSVTLTHVLCACSHAGMVTVGLQVLYEM 75
            HG A+EAL LF  +Q+ GI PDS+T T +L ACSHAG+V  GL +  +M
Sbjct: 1729 HGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADM 1777


>ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Vitis vinifera]
          Length = 858

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 27/49 (55%), Positives = 35/49 (71%)
 Frame = -3

Query: 221 HGLAMEALNLFS*MQRVGISPDSVTLTHVLCACSHAGMVTVGLQVLYEM 75
           HG A+EAL LF  +Q+ GI PDS+T T +L ACSHAG+V  GL +  +M
Sbjct: 634 HGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADM 682


>ref|XP_002875497.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297321335|gb|EFH51756.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 629

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/52 (50%), Positives = 34/52 (65%)
 Frame = -3

Query: 221 HGLAMEALNLFS*MQRVGISPDSVTLTHVLCACSHAGMVTVGLQVLYEMSKV 66
           HG   EA+ LFS M++ GI PD VT   VLC+C+HAG++  G+   Y M KV
Sbjct: 394 HGHGKEAIELFSRMRKEGIWPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKV 445


>ref|XP_004289579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08490-like [Fragaria vesca subsp. vesca]
          Length = 883

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 26/52 (50%), Positives = 37/52 (71%)
 Frame = -3

Query: 221 HGLAMEALNLFS*MQRVGISPDSVTLTHVLCACSHAGMVTVGLQVLYEMSKV 66
           HG+  EAL +FS M  +GI PD+V +T VL ACSHAG+V  GL++ + + +V
Sbjct: 682 HGMGEEALRIFSHMLELGIKPDNVIITAVLSACSHAGLVNEGLKIFHTIEEV 733


>ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g47840-like [Cucumis
           sativus]
          Length = 712

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/51 (54%), Positives = 34/51 (66%)
 Frame = -3

Query: 221 HGLAMEALNLFS*MQRVGISPDSVTLTHVLCACSHAGMVTVGLQVLYEMSK 69
           HG + EA+ LF  +Q+VG+ PDSVT   VL ACSHAGMV +G      MSK
Sbjct: 498 HGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSK 548


>ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Cucumis sativus]
          Length = 712

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/51 (54%), Positives = 34/51 (66%)
 Frame = -3

Query: 221 HGLAMEALNLFS*MQRVGISPDSVTLTHVLCACSHAGMVTVGLQVLYEMSK 69
           HG + EA+ LF  +Q+VG+ PDSVT   VL ACSHAGMV +G      MSK
Sbjct: 498 HGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSK 548


>ref|XP_006464333.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Citrus sinensis]
          Length = 608

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/52 (53%), Positives = 36/52 (69%)
 Frame = -3

Query: 221 HGLAMEALNLFS*MQRVGISPDSVTLTHVLCACSHAGMVTVGLQVLYEMSKV 66
           HG A +AL++FS M +VGI PD VT   VL ACSHAG+V  G +   +MS+V
Sbjct: 404 HGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEGCKHFLDMSRV 455


>ref|XP_006352207.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Solanum tuberosum]
          Length = 844

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/52 (50%), Positives = 35/52 (67%)
 Frame = -3

Query: 221 HGLAMEALNLFS*MQRVGISPDSVTLTHVLCACSHAGMVTVGLQVLYEMSKV 66
           HG A+EAL LF  + + G+ PDS+T T VL +C HAG++  GL V Y+M  V
Sbjct: 638 HGRAIEALALFKRLCKEGVEPDSITFTSVLSSCCHAGLIKEGLDVFYDMLSV 689


>ref|XP_006445525.1| hypothetical protein CICLE_v10019817mg [Citrus clementina]
           gi|557547787|gb|ESR58765.1| hypothetical protein
           CICLE_v10019817mg [Citrus clementina]
          Length = 501

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/52 (53%), Positives = 36/52 (69%)
 Frame = -3

Query: 221 HGLAMEALNLFS*MQRVGISPDSVTLTHVLCACSHAGMVTVGLQVLYEMSKV 66
           HG A +AL++FS M +VGI PD VT   VL ACSHAG+V  G +   +MS+V
Sbjct: 297 HGKAWKALDIFSEMSQVGIEPDEVTFVGVLSACSHAGLVEEGCKHFLDMSRV 348


>ref|XP_004503024.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08490-like [Cicer arietinum]
          Length = 874

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/52 (48%), Positives = 34/52 (65%)
 Frame = -3

Query: 221 HGLAMEALNLFS*MQRVGISPDSVTLTHVLCACSHAGMVTVGLQVLYEMSKV 66
           HG+  EAL+ FS M  +GI PD V  T +L ACSHAG +  GL++ Y + K+
Sbjct: 671 HGMGKEALSTFSQMLNLGIKPDHVIFTSILSACSHAGRIDEGLKIFYSIEKI 722


>ref|XP_002885157.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330997|gb|EFH61416.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 655

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/51 (52%), Positives = 35/51 (68%)
 Frame = -3

Query: 221 HGLAMEALNLFS*MQRVGISPDSVTLTHVLCACSHAGMVTVGLQVLYEMSK 69
           HGL  EAL+LF+ MQ  G+ PD VTL  +L ACSH+G+V  G Q+   MS+
Sbjct: 488 HGLGKEALSLFNSMQDTGVHPDEVTLLAILSACSHSGLVDEGKQLFNSMSR 538


>ref|XP_006431157.1| hypothetical protein CICLE_v10011507mg [Citrus clementina]
           gi|557533214|gb|ESR44397.1| hypothetical protein
           CICLE_v10011507mg [Citrus clementina]
          Length = 514

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/52 (55%), Positives = 34/52 (65%)
 Frame = -3

Query: 221 HGLAMEALNLFS*MQRVGISPDSVTLTHVLCACSHAGMVTVGLQVLYEMSKV 66
           HG A EAL LFS M+   ISP+ VT   VLCAC+HAGMV  G +  +EM  V
Sbjct: 309 HGYAEEALELFSNMKNSSISPNYVTFLGVLCACNHAGMVEDGYRYFHEMEHV 360


>ref|XP_006395295.1| hypothetical protein EUTSA_v10003866mg [Eutrema salsugineum]
           gi|557091934|gb|ESQ32581.1| hypothetical protein
           EUTSA_v10003866mg [Eutrema salsugineum]
          Length = 598

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/51 (49%), Positives = 33/51 (64%)
 Frame = -3

Query: 221 HGLAMEALNLFS*MQRVGISPDSVTLTHVLCACSHAGMVTVGLQVLYEMSK 69
           HG   +A+ LFS M+R G+ PD VT   VLC+C+HAG+V  G+   Y M K
Sbjct: 392 HGHGKKAIELFSRMRREGVRPDKVTFIAVLCSCNHAGLVDEGIDYFYSMEK 442


>ref|XP_002310258.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550334781|gb|EEE90708.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 666

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/52 (50%), Positives = 35/52 (67%)
 Frame = -3

Query: 221 HGLAMEALNLFS*MQRVGISPDSVTLTHVLCACSHAGMVTVGLQVLYEMSKV 66
           HG + EA++LF  + +VG+ PDSVT   VL ACSHAG+V +G      +SKV
Sbjct: 450 HGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKV 501


>ref|XP_002318314.2| hypothetical protein POPTR_0012s03810g [Populus trichocarpa]
           gi|550326327|gb|EEE96534.2| hypothetical protein
           POPTR_0012s03810g [Populus trichocarpa]
          Length = 643

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/51 (52%), Positives = 34/51 (66%)
 Frame = -3

Query: 221 HGLAMEALNLFS*MQRVGISPDSVTLTHVLCACSHAGMVTVGLQVLYEMSK 69
           HG   EAL +F  M+RVG+ PD VTL  VL ACSH+GM+  G++    MSK
Sbjct: 350 HGRGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSK 400