BLASTX nr result
ID: Cocculus23_contig00031193
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00031193
(448 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMT01545.1| hypothetical protein F775_52571 [Aegilops tauschii] 102 4e-29
gb|EYU18647.1| hypothetical protein MIMGU_mgv1a022303mg, partial... 91 1e-28
ref|XP_006410659.1| hypothetical protein EUTSA_v10016379mg [Eutr... 94 1e-28
gb|AFW85951.1| hypothetical protein ZEAMMB73_518426 [Zea mays] 97 2e-28
ref|XP_002437789.1| hypothetical protein SORBIDRAFT_10g002620 [S... 97 4e-28
ref|XP_004237347.1| PREDICTED: pentatricopeptide repeat-containi... 89 2e-27
dbj|BAJ93228.1| predicted protein [Hordeum vulgare subsp. vulgare] 101 2e-27
ref|XP_002881370.1| pentatricopeptide repeat-containing protein ... 88 1e-26
ref|XP_003561204.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-24
ref|XP_002322628.1| pentatricopeptide repeat-containing family p... 115 5e-24
ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containi... 111 1e-22
ref|XP_007028547.1| Pentatricopeptide repeat (PPR) superfamily p... 110 3e-22
ref|XP_004498123.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 109 4e-22
ref|XP_004308620.1| PREDICTED: pentatricopeptide repeat-containi... 104 1e-20
ref|XP_007204422.1| hypothetical protein PRUPE_ppb002215mg [Prun... 104 1e-20
gb|EXB41187.1| hypothetical protein L484_005223 [Morus notabilis] 104 1e-20
ref|XP_002529164.1| pentatricopeptide repeat-containing protein,... 104 1e-20
ref|XP_006663406.1| PREDICTED: pentatricopeptide repeat-containi... 102 7e-20
ref|XP_006587960.1| PREDICTED: pentatricopeptide repeat-containi... 102 7e-20
ref|XP_007161435.1| hypothetical protein PHAVU_001G068400g [Phas... 100 2e-19
>gb|EMT01545.1| hypothetical protein F775_52571 [Aegilops tauschii]
Length = 911
Score = 102 bits (255), Expect(2) = 4e-29
Identities = 53/92 (57%), Positives = 70/92 (76%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERN-SHHGIQWSGF 177
+G +DEAR LFD MP+RNVVSWNAM++GYA+NLR++EAL LF MPER+ + I +GF
Sbjct: 190 SGSVDEARGLFDGMPERNVVSWNAMISGYARNLRIDEALDLFMNMPERDVASWNIMITGF 249
Query: 178 IHNGILKWAQKLFNELHKRNVLSLTSSLQRLL 273
I N LK AQ+LF+E+ KRNV+S T+ + L
Sbjct: 250 IQNKDLKKAQELFDEMPKRNVVSWTTMMNGCL 281
Score = 51.2 bits (121), Expect(2) = 4e-29
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +3
Query: 330 DKVRPNQGTFVSVLSACSDLASLGEAKQIHQMISKTVYQ 446
D +RPNQ TF+ + ACS+LA L E +Q+HQMI KT +Q
Sbjct: 299 DGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTPFQ 337
Score = 67.8 bits (164), Expect = 1e-09
Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Frame = +1
Query: 7 KIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNS-HHGIQWSGFIH 183
+ DEAR LFD MP+RNVVSWN M+ YA R A LF+ MP R++ I + +
Sbjct: 99 RADEARALFDRMPERNVVSWNTMLEAYASAGRTGAACALFDSMPVRDAGSWNILLAALVR 158
Query: 184 NGILKWAQKLFNELHKRNVLSLTSSLQRLLDTSNMGRGGTKD 309
+G + A+ LF + +RNV+S T+ + + + R G+ D
Sbjct: 159 SGTMDEARNLFERMPERNVMSWTTMV------AGLARSGSVD 194
Score = 59.7 bits (143), Expect = 4e-07
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Frame = +1
Query: 4 GKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQW----S 171
G++ +AR LFD P R+VVSW AMV YA+ +L EA LF R R + + W S
Sbjct: 35 GRVPDARRLFDRTPDRDVVSWTAMVAAYARQGQLHEASALFHRPDAR--RNVVTWTALLS 92
Query: 172 GFIHNGILKWAQKLFNELHKRNVLSLTSSLQRLLDTSNMG 291
G+ A+ LF+ + +RNV+S + L+ G
Sbjct: 93 GYARARRADEARALFDRMPERNVVSWNTMLEAYASAGRTG 132
>gb|EYU18647.1| hypothetical protein MIMGU_mgv1a022303mg, partial [Mimulus
guttatus]
Length = 539
Score = 91.3 bits (225), Expect(2) = 1e-28
Identities = 47/95 (49%), Positives = 69/95 (72%), Gaps = 2/95 (2%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHH-GIQWSGF 177
N ++DEAR LFD +P+RNVVSWNAM+TGYA+N RL EA LF++MPE+++ + F
Sbjct: 144 NKRVDEARLLFDTVPERNVVSWNAMITGYAQNTRLSEAYNLFKKMPEKDAQSWNAMITAF 203
Query: 178 IHNGILKWAQKLFNELHK-RNVLSLTSSLQRLLDT 279
I NG L+ A+KLF+E+ +NV+S T+ + L+ +
Sbjct: 204 IQNGELEKARKLFDEMPAGKNVVSWTAIISGLMQS 238
Score = 61.2 bits (147), Expect(2) = 1e-28
Identities = 27/40 (67%), Positives = 32/40 (80%)
Frame = +3
Query: 327 ADKVRPNQGTFVSVLSACSDLASLGEAKQIHQMISKTVYQ 446
+ KV+PN+ TF SVL ACSDLA LGE Q+HQ+ISKT YQ
Sbjct: 254 SSKVKPNEATFASVLGACSDLAGLGEGMQVHQVISKTAYQ 293
Score = 67.8 bits (164), Expect = 1e-09
Identities = 38/102 (37%), Positives = 65/102 (63%), Gaps = 5/102 (4%)
Frame = +1
Query: 4 GKIDEARELFDLMP-KRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQWS--- 171
G + EARELFD K++VV+W +M++GY K+ R+ EA +LF MP++N + W+
Sbjct: 20 GLVKEARELFDRADAKKDVVTWTSMISGYLKSKRISEAERLFHAMPDKNV---VTWNTMI 76
Query: 172 -GFIHNGILKWAQKLFNELHKRNVLSLTSSLQRLLDTSNMGR 294
G++ +G ++ A +F+E+ +RNV+S + + L+ N GR
Sbjct: 77 DGYVRSGRIEHALTVFDEMGERNVVSWNTVISGLV---NCGR 115
Score = 64.3 bits (155), Expect = 2e-08
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Frame = +1
Query: 7 KIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQW----SG 174
+I EA LF MP +NVV+WN M+ GY ++ R+E AL +F+ M ERN + W SG
Sbjct: 53 RISEAERLFHAMPDKNVVTWNTMIDGYVRSGRIEHALTVFDEMGERNV---VSWNTVISG 109
Query: 175 FIHNGILKWAQKLFNELHKRNVLSLTSSLQRL 270
++ G + A F+ +NV+S T + L
Sbjct: 110 LVNCGRIDEAMGFFSRTPLKNVISWTIMISGL 141
Score = 57.4 bits (137), Expect = 2e-06
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQW---- 168
+G+I+ A +FD M +RNVVSWN +++G R++EA+ F R P +N I W
Sbjct: 82 SGRIEHALTVFDEMGERNVVSWNTVISGLVNCGRIDEAMGFFSRTPLKNV---ISWTIMI 138
Query: 169 SGFIHNGILKWAQKLFNELHKRNVLS 246
SG N + A+ LF+ + +RNV+S
Sbjct: 139 SGLARNKRVDEARLLFDTVPERNVVS 164
>ref|XP_006410659.1| hypothetical protein EUTSA_v10016379mg [Eutrema salsugineum]
gi|557111828|gb|ESQ52112.1| hypothetical protein
EUTSA_v10016379mg [Eutrema salsugineum]
Length = 626
Score = 94.0 bits (232), Expect(2) = 1e-28
Identities = 46/88 (52%), Positives = 64/88 (72%), Gaps = 1/88 (1%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERN-SHHGIQWSGF 177
NGK+DEAR +FD MP+RN +SWNAM+TGYA N R+EEA +LF+ MPERN + +GF
Sbjct: 214 NGKVDEARRVFDCMPERNTISWNAMITGYAHNNRIEEADQLFQVMPERNFASWNTMITGF 273
Query: 178 IHNGILKWAQKLFNELHKRNVLSLTSSL 261
I NG + A LF+ + ++NV+S T+ +
Sbjct: 274 IRNGEINRACGLFDRMPQKNVISWTTMI 301
Score = 58.2 bits (139), Expect(2) = 1e-28
Identities = 25/37 (67%), Positives = 34/37 (91%)
Frame = +3
Query: 336 VRPNQGTFVSVLSACSDLASLGEAKQIHQMISKTVYQ 446
V+PN+GT+VS+LSACSD+A L E +QIHQ+ISK+V+Q
Sbjct: 326 VKPNEGTYVSILSACSDMAGLVEGQQIHQLISKSVHQ 362
Score = 73.2 bits (178), Expect = 4e-11
Identities = 38/101 (37%), Positives = 60/101 (59%), Gaps = 4/101 (3%)
Frame = +1
Query: 4 GKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQWS---- 171
G+I EA LF+ MP R+V+SW AMV G KN +++EA ++F+ MPERN+ I W+
Sbjct: 184 GRIQEAMNLFERMPTRDVISWTAMVDGLGKNGKVDEARRVFDCMPERNT---ISWNAMIT 240
Query: 172 GFIHNGILKWAQKLFNELHKRNVLSLTSSLQRLLDTSNMGR 294
G+ HN ++ A +LF + +RN S + + + + R
Sbjct: 241 GYAHNNRIEEADQLFQVMPERNFASWNTMITGFIRNGEINR 281
Score = 69.7 bits (169), Expect = 4e-10
Identities = 36/86 (41%), Positives = 57/86 (66%), Gaps = 4/86 (4%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQWSGFI 180
+G+ID+A ELFD MP+RN VSWN ++ A+ R++EA+ LFERMP R+ I W+ +
Sbjct: 152 SGRIDKALELFDEMPERNTVSWNTLIKALAQLGRIQEAMNLFERMPTRDV---ISWTAMV 208
Query: 181 ----HNGILKWAQKLFNELHKRNVLS 246
NG + A+++F+ + +RN +S
Sbjct: 209 DGLGKNGKVDEARRVFDCMPERNTIS 234
Score = 66.6 bits (161), Expect = 3e-09
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 4/88 (4%)
Frame = +1
Query: 19 ARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQWSGFI----HN 186
A LF MP+RN VSWN M+ GYA++ R+++AL+LF+ MPERN+ + W+ I
Sbjct: 127 AEMLFQEMPERNEVSWNTMIDGYAQSGRIDKALELFDEMPERNT---VSWNTLIKALAQL 183
Query: 187 GILKWAQKLFNELHKRNVLSLTSSLQRL 270
G ++ A LF + R+V+S T+ + L
Sbjct: 184 GRIQEAMNLFERMPTRDVISWTAMVDGL 211
Score = 56.2 bits (134), Expect = 4e-06
Identities = 24/45 (53%), Positives = 33/45 (73%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERM 135
NG+I+ A LFD MP++NV+SW M+TGY +N E+ALK+F M
Sbjct: 276 NGEINRACGLFDRMPQKNVISWTTMITGYVQNKENEDALKVFSNM 320
>gb|AFW85951.1| hypothetical protein ZEAMMB73_518426 [Zea mays]
Length = 620
Score = 97.4 bits (241), Expect(2) = 2e-28
Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 3/111 (2%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERN-SHHGIQWSGF 177
+G +DEAR LFD MP+RNVVSWNAM++GY +N RL+EAL LF +MP R+ + I +GF
Sbjct: 209 SGNVDEARLLFDSMPERNVVSWNAMISGYTRNHRLDEALDLFTKMPHRDIASCNIMITGF 268
Query: 178 IHNGILKWAQKLFNELHKRNVLSLTSSLQRLL--DTSNMGRGGTKDVLKSG 324
I N LK A+KLF+E+ +RNV++ T+ + L S + G + +L SG
Sbjct: 269 IQNKDLKRARKLFDEMPERNVVTWTTMMNGYLKGKQSELSLGLFRGMLMSG 319
Score = 54.3 bits (129), Expect(2) = 2e-28
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = +3
Query: 336 VRPNQGTFVSVLSACSDLASLGEAKQIHQMISKTVYQ 446
+RPNQ TF+ L ACSDLA+L E KQ+HQMI KT +Q
Sbjct: 320 IRPNQVTFLGALDACSDLATLCEGKQVHQMICKTAFQ 356
Score = 64.3 bits (155), Expect = 2e-08
Identities = 35/96 (36%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Frame = +1
Query: 4 GKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNS-HHGIQWSGFI 180
G +DEA LF MP+RNVVSWN M+ YA R +A LF+RMP R++ I + +
Sbjct: 117 GLVDEAEVLFQRMPQRNVVSWNTMLEAYAVAGRAGDACALFDRMPVRDAGSWNILLAMLV 176
Query: 181 HNGILKWAQKLFNELHKRNVLSLTSSLQRLLDTSNM 288
+G + A++LF + +R+V++ T+ + + + N+
Sbjct: 177 RSGSVDKARELFGRMPERDVMAWTTMVDGVARSGNV 212
Score = 62.4 bits (150), Expect = 6e-08
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Frame = +1
Query: 4 GKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQW----S 171
G++ +AR+LFD P+R+VVSW A+V+ YA+ L +A LF+R R + + W S
Sbjct: 54 GRVWDARKLFDGTPERDVVSWTALVSAYARRGMLRDARSLFDRSDAR--RNVVTWTALLS 111
Query: 172 GFIHNGILKWAQKLFNELHKRNVLSLTSSLQ 264
G+ G++ A+ LF + +RNV+S + L+
Sbjct: 112 GYARAGLVDEAEVLFQRMPQRNVVSWNTMLE 142
>ref|XP_002437789.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
gi|241916012|gb|EER89156.1| hypothetical protein
SORBIDRAFT_10g002620 [Sorghum bicolor]
Length = 623
Score = 97.4 bits (241), Expect(2) = 4e-28
Identities = 49/92 (53%), Positives = 70/92 (76%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERN-SHHGIQWSGF 177
+GK+DEAR LFD MP+RNVVSWNAM++GY +N R++EAL LF +MPER+ + I +GF
Sbjct: 211 SGKVDEARVLFDSMPERNVVSWNAMISGYTRNHRIDEALDLFMKMPERDIASCNIMVTGF 270
Query: 178 IHNGILKWAQKLFNELHKRNVLSLTSSLQRLL 273
I N LK A++LF+E+ +RNV++ T+ + L
Sbjct: 271 IQNKDLKRARELFDEMPERNVVTWTTMMNGYL 302
Score = 53.1 bits (126), Expect(2) = 4e-28
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +3
Query: 339 RPNQGTFVSVLSACSDLASLGEAKQIHQMISKTVYQ 446
RPNQ TF+ L ACSDLA+L E KQ+HQMI KT +Q
Sbjct: 323 RPNQVTFLGALDACSDLAALCEGKQVHQMICKTTFQ 358
Score = 63.2 bits (152), Expect = 4e-08
Identities = 33/83 (39%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Frame = +1
Query: 10 IDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNS-HHGIQWSGFIHN 186
+DEA LF MP+RNVVSWN M+ YA R+ +A LF+RMP R++ I + + +
Sbjct: 121 VDEAEALFQRMPQRNVVSWNTMLEAYAAAGRVGDACALFDRMPVRDAGSWNILLATLVRS 180
Query: 187 GILKWAQKLFNELHKRNVLSLTS 255
G + A++LF + +R+V++ T+
Sbjct: 181 GSVDKARELFGRMPERDVMAWTT 203
Score = 56.6 bits (135), Expect = 3e-06
Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Frame = +1
Query: 4 GKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQW----S 171
G++ +AR+LFD P +VVSW A+V+ YA+ L +A +LF+R R + + W S
Sbjct: 56 GRVWDARKLFDGTPDWDVVSWTALVSAYARRGMLRDARELFDRPDAR--RNVVTWTALLS 113
Query: 172 GFIHNGILKWAQKLFNELHKRNVLSLTSSLQRLLDTSNMG 291
G+ ++ A+ LF + +RNV+S + L+ +G
Sbjct: 114 GYARARLVDEAEALFQRMPQRNVVSWNTMLEAYAAAGRVG 153
>ref|XP_004237347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Solanum lycopersicum]
Length = 624
Score = 88.6 bits (218), Expect(2) = 2e-27
Identities = 45/88 (51%), Positives = 64/88 (72%), Gaps = 1/88 (1%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPER-NSHHGIQWSGF 177
NG+++EAR LFD P+RNVVSWNAM+TGY +N RL+EA +LFE MPE+ S GF
Sbjct: 221 NGRVEEARTLFDRTPERNVVSWNAMITGYTQNSRLDEAFELFEIMPEKIVSSWNTMIMGF 280
Query: 178 IHNGILKWAQKLFNELHKRNVLSLTSSL 261
I NG L A+ LF+++ +R+V+S ++ +
Sbjct: 281 IQNGELGRARILFDKMRQRDVVSWSTMI 308
Score = 59.7 bits (143), Expect(2) = 2e-27
Identities = 27/37 (72%), Positives = 31/37 (83%)
Frame = +3
Query: 336 VRPNQGTFVSVLSACSDLASLGEAKQIHQMISKTVYQ 446
V+PN+GTFVSVL ACSDLA L E QIHQ+I+KT YQ
Sbjct: 333 VKPNEGTFVSVLGACSDLAGLSEGMQIHQVINKTTYQ 369
Score = 76.3 bits (186), Expect = 4e-12
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQW---- 168
NG+I+EAR LFD MP++NVVSW M+ G ++N R+EEA LF+R PERN + W
Sbjct: 190 NGRINEARVLFDQMPEKNVVSWTTMIAGLSRNGRVEEARTLFDRTPERNV---VSWNAMI 246
Query: 169 SGFIHNGILKWAQKLFNELHKRNVLSLTSSLQRLLDTSNMGR 294
+G+ N L A +LF + ++ V S + + + +GR
Sbjct: 247 TGYTQNSRLDEAFELFEIMPEKIVSSWNTMIMGFIQNGELGR 288
Score = 71.2 bits (173), Expect = 1e-10
Identities = 37/92 (40%), Positives = 62/92 (67%), Gaps = 4/92 (4%)
Frame = +1
Query: 7 KIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQW----SG 174
+I EA LF+ MP++NVVSWN+++ GYA+N R+++ L+LF +M ERN + W +G
Sbjct: 130 RILEAEMLFNEMPEKNVVSWNSLIDGYARNGRIDKGLELFWKMGERNV---VSWNMVIAG 186
Query: 175 FIHNGILKWAQKLFNELHKRNVLSLTSSLQRL 270
NG + A+ LF+++ ++NV+S T+ + L
Sbjct: 187 LAQNGRINEARVLFDQMPEKNVVSWTTMIAGL 218
Score = 70.5 bits (171), Expect = 2e-10
Identities = 39/100 (39%), Positives = 60/100 (60%), Gaps = 4/100 (4%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQW---- 168
NG+ID+ ELF M +RNVVSWN ++ G A+N R+ EA LF++MPE+N + W
Sbjct: 159 NGRIDKGLELFWKMGERNVVSWNMVIAGLAQNGRINEARVLFDQMPEKNV---VSWTTMI 215
Query: 169 SGFIHNGILKWAQKLFNELHKRNVLSLTSSLQRLLDTSNM 288
+G NG ++ A+ LF+ +RNV+S + + S +
Sbjct: 216 AGLSRNGRVEEARTLFDRTPERNVVSWNAMITGYTQNSRL 255
Score = 62.4 bits (150), Expect = 6e-08
Identities = 35/103 (33%), Positives = 62/103 (60%), Gaps = 5/103 (4%)
Frame = +1
Query: 4 GKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQWSGFI- 180
G++DEAR+LFD M + +VVSW AM++GY + ++++A +LF+R + + W+ +
Sbjct: 66 GQVDEARKLFDKMSEPDVVSWTAMISGYIRCGKIDKARELFDRTDAKRD--VVTWTAMVA 123
Query: 181 ----HNGILKWAQKLFNELHKRNVLSLTSSLQRLLDTSNMGRG 297
N IL+ A+ LFNE+ ++NV+S S + + +G
Sbjct: 124 AYARMNRILE-AEMLFNEMPEKNVVSWNSLIDGYARNGRIDKG 165
>dbj|BAJ93228.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 101 bits (252), Expect(2) = 2e-27
Identities = 53/92 (57%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERN-SHHGIQWSGF 177
+G DEAR LFD MP+RNVVSWNAM++GYA+NLR++EAL LF MPER+ + I +GF
Sbjct: 208 SGSADEARALFDGMPERNVVSWNAMISGYARNLRIDEALDLFMNMPERDVASWNIMITGF 267
Query: 178 IHNGILKWAQKLFNELHKRNVLSLTSSLQRLL 273
I N LK AQ+LF+E+ KRNV+S T+ + L
Sbjct: 268 IQNKDLKKAQELFDEMPKRNVVSWTTMMNGCL 299
Score = 46.6 bits (109), Expect(2) = 2e-27
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3
Query: 330 DKVRPNQGTFVSVLSACSDLASLGEAKQIHQMISKTVYQ 446
D +RPNQ TF+ + A S+LA L E +Q+HQMI KT +Q
Sbjct: 317 DGIRPNQVTFLGAVDAGSNLAGLSEGQQVHQMICKTPFQ 355
Score = 72.8 bits (177), Expect = 5e-11
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Frame = +1
Query: 7 KIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNS-HHGIQWSGFIH 183
++DEAR LFD MP+RNVVSWN M+ YA R+ A LF+ MP R++ I + +
Sbjct: 117 RVDEARALFDRMPERNVVSWNTMLEAYASAGRMGAACALFDGMPVRDAGSWNILLAALVR 176
Query: 184 NGILKWAQKLFNELHKRNVLSLTSSLQRLLDTSNMGRGGTKD 309
+G + A++LF + +RNV+S T+ + S + R G+ D
Sbjct: 177 SGTMDEARRLFERMPERNVMSWTTMI------SGLARSGSAD 212
Score = 60.5 bits (145), Expect = 2e-07
Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Frame = +1
Query: 4 GKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQW----S 171
G++ +AR LFD P R+VVSW AMV YA+ +L EA L R R + + W S
Sbjct: 53 GRVPDARRLFDRTPDRDVVSWTAMVAAYARQGQLHEASALLHRPDAR--RNVVTWTALLS 110
Query: 172 GFIHNGILKWAQKLFNELHKRNVLSLTSSLQRLLDTSNMG 291
G+ + A+ LF+ + +RNV+S + L+ MG
Sbjct: 111 GYARARRVDEARALFDRMPERNVVSWNTMLEAYASAGRMG 150
>ref|XP_002881370.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297327209|gb|EFH57629.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 627
Score = 88.2 bits (217), Expect(2) = 1e-26
Identities = 43/88 (48%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERN-SHHGIQWSGF 177
NGK+DEAR LFD MP+RN++SWNAM+TGY N R++EA +LF+ MPER+ + +GF
Sbjct: 215 NGKVDEARRLFDCMPERNIISWNAMITGYTYNNRIDEADQLFQVMPERDFASWNTMITGF 274
Query: 178 IHNGILKWAQKLFNELHKRNVLSLTSSL 261
I N + A LF+ + ++NV+S T+ +
Sbjct: 275 IRNREINRACGLFDRMPQKNVISWTAMI 302
Score = 57.4 bits (137), Expect(2) = 1e-26
Identities = 26/37 (70%), Positives = 33/37 (89%)
Frame = +3
Query: 336 VRPNQGTFVSVLSACSDLASLGEAKQIHQMISKTVYQ 446
V+PN GT+VS+LSACSDLA L E +QIHQ+ISK+V+Q
Sbjct: 327 VKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQ 363
Score = 71.6 bits (174), Expect = 1e-10
Identities = 37/86 (43%), Positives = 57/86 (66%), Gaps = 4/86 (4%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQWS--- 171
+G+ID+A ELFD MP+RN VSWN M+ + R++EA+ LFERMP ++ I W+
Sbjct: 153 SGRIDKALELFDEMPERNTVSWNTMIKALVQRGRIDEAMNLFERMPIKDV---ISWTAMV 209
Query: 172 -GFIHNGILKWAQKLFNELHKRNVLS 246
G NG + A++LF+ + +RN++S
Sbjct: 210 DGLAKNGKVDEARRLFDCMPERNIIS 235
Score = 69.7 bits (169), Expect = 4e-10
Identities = 38/101 (37%), Positives = 60/101 (59%), Gaps = 4/101 (3%)
Frame = +1
Query: 4 GKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQW----S 171
G+IDEA LF+ MP ++V+SW AMV G AKN +++EA +LF+ MPERN I W +
Sbjct: 185 GRIDEAMNLFERMPIKDVISWTAMVDGLAKNGKVDEARRLFDCMPERNI---ISWNAMIT 241
Query: 172 GFIHNGILKWAQKLFNELHKRNVLSLTSSLQRLLDTSNMGR 294
G+ +N + A +LF + +R+ S + + + + R
Sbjct: 242 GYTYNNRIDEADQLFQVMPERDFASWNTMITGFIRNREINR 282
Score = 68.2 bits (165), Expect = 1e-09
Identities = 34/92 (36%), Positives = 57/92 (61%), Gaps = 4/92 (4%)
Frame = +1
Query: 7 KIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQWS----G 174
++ A LF MP+RN+VSWN M+ GYA++ R+++AL+LF+ MPERN+ + W+
Sbjct: 124 QLSVAETLFQEMPERNIVSWNTMIDGYAQSGRIDKALELFDEMPERNT---VSWNTMIKA 180
Query: 175 FIHNGILKWAQKLFNELHKRNVLSLTSSLQRL 270
+ G + A LF + ++V+S T+ + L
Sbjct: 181 LVQRGRIDEAMNLFERMPIKDVISWTAMVDGL 212
Score = 67.0 bits (162), Expect = 3e-09
Identities = 38/95 (40%), Positives = 60/95 (63%), Gaps = 5/95 (5%)
Frame = +1
Query: 4 GKIDEARELFDLMPKR-NVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQWS--- 171
G + EARELFD + R NVV+W AMV+GY ++ +L A LF+ MPERN + W+
Sbjct: 91 GNMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSVAETLFQEMPERNI---VSWNTMI 147
Query: 172 -GFIHNGILKWAQKLFNELHKRNVLSLTSSLQRLL 273
G+ +G + A +LF+E+ +RN +S + ++ L+
Sbjct: 148 DGYAQSGRIDKALELFDEMPERNTVSWNTMIKALV 182
Score = 65.5 bits (158), Expect = 7e-09
Identities = 34/85 (40%), Positives = 56/85 (65%), Gaps = 4/85 (4%)
Frame = +1
Query: 4 GKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQW----S 171
GK+ EAR+LFD +P+R+VV+W ++TGY K + EA +LF+R+ R + + W S
Sbjct: 60 GKLAEARKLFDGLPERDVVTWTDVITGYIKLGNMREARELFDRVDSRK--NVVTWTAMVS 117
Query: 172 GFIHNGILKWAQKLFNELHKRNVLS 246
G++ + L A+ LF E+ +RN++S
Sbjct: 118 GYLRSKQLSVAETLFQEMPERNIVS 142
Score = 56.6 bits (135), Expect = 3e-06
Identities = 25/45 (55%), Positives = 34/45 (75%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERM 135
N +I+ A LFD MP++NV+SW AM+TGY +N EEALK+F +M
Sbjct: 277 NREINRACGLFDRMPQKNVISWTAMITGYVENKENEEALKVFSKM 321
>ref|XP_003561204.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Brachypodium distachyon]
Length = 618
Score = 87.0 bits (214), Expect(2) = 2e-24
Identities = 44/94 (46%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERN-SHHGIQWSGF 177
+G ++EAR LFD MP+RNVVSWNAM++GYA+N ++EA LF +MP R+ + I +GF
Sbjct: 204 SGSVNEARALFDGMPERNVVSWNAMISGYARNHMIDEAHDLFMKMPTRDIASWNIMITGF 263
Query: 178 IHNGILKWAQKLFNELHKRNVLSLTSSLQRLLDT 279
I N L+ AQ+LF+++ +RNV++ T+ + L +
Sbjct: 264 IQNKNLERAQELFDKMPRRNVVTWTTMMNGYLQS 297
Score = 51.2 bits (121), Expect(2) = 2e-24
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +3
Query: 330 DKVRPNQGTFVSVLSACSDLASLGEAKQIHQMISKTVYQ 446
D +RPNQ TF+ + ACS+LA L E +Q+HQMI KT +Q
Sbjct: 313 DGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTPFQ 351
Score = 67.0 bits (162), Expect = 3e-09
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = +1
Query: 4 GKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNS-HHGIQWSGFI 180
G++DEA LF MP+RNVVSWN M+ Y + R+ +A LF MP R++ I + +
Sbjct: 112 GRVDEAEALFGRMPERNVVSWNTMLEAYTSSGRVGDACTLFNGMPVRDAGSWNILLAALV 171
Query: 181 HNGILKWAQKLFNELHKRNVLSLTS 255
+G + A+KLF+ + +RNV++ T+
Sbjct: 172 RSGNIDKARKLFDRMPERNVMAWTT 196
Score = 60.8 bits (146), Expect = 2e-07
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Frame = +1
Query: 4 GKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQW----S 171
G++ +AR LFD P R+VVSW A+V YA L +A LF+R R + + W S
Sbjct: 49 GRVSDARRLFDRTPDRDVVSWTALVAAYACQGMLHDARALFDRPDAR--RNVVTWTALLS 106
Query: 172 GFIHNGILKWAQKLFNELHKRNVLSLTSSLQRLLDTSNMG 291
G+ G + A+ LF + +RNV+S + L+ + +G
Sbjct: 107 GYARAGRVDEAEALFGRMPERNVVSWNTMLEAYTSSGRVG 146
>ref|XP_002322628.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222867258|gb|EEF04389.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 559
Score = 115 bits (289), Expect = 5e-24
Identities = 59/107 (55%), Positives = 79/107 (73%), Gaps = 1/107 (0%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERN-SHHGIQWSGF 177
+G++DEAR++FD MP+RNVVSWNAMVTGYAKN+RL+EA LFERMPERN S +GF
Sbjct: 144 SGRVDEARKVFDRMPERNVVSWNAMVTGYAKNMRLDEAFDLFERMPERNLSSWNTMITGF 203
Query: 178 IHNGILKWAQKLFNELHKRNVLSLTSSLQRLLDTSNMGRGGTKDVLK 318
I NG L WA+K+FNE+ ++NV+S T+ + T + G ++ LK
Sbjct: 204 IQNGELAWARKVFNEMPEKNVVSWTTMI-----TGYVQEGESESALK 245
Score = 75.5 bits (184), Expect = 7e-12
Identities = 37/92 (40%), Positives = 62/92 (67%), Gaps = 4/92 (4%)
Frame = +1
Query: 7 KIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQW----SG 174
+I+EA LF++MP +NVVSWN M+ GY KN +++A+++FERM ERN + W +
Sbjct: 53 RIEEAERLFEVMPVKNVVSWNTMIDGYGKNREVDKAIEVFERMHERNM---VSWNAVIAA 109
Query: 175 FIHNGILKWAQKLFNELHKRNVLSLTSSLQRL 270
+ G ++ A++ F+E+ KR+V+S T+ + L
Sbjct: 110 LVQCGRVEEARRRFDEMPKRDVISWTTMVMGL 141
Score = 68.6 bits (166), Expect = 9e-10
Identities = 43/102 (42%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Frame = +3
Query: 147 LPSWNTMVRFHPQRNS*MGSKTV**VAQEKCFILDKFTTEVIGYLQHGQRRH*-RCSQEW 323
L SWNTM+ Q ++ V EK + +TT + GY+Q G+ + E
Sbjct: 193 LSSWNTMITGFIQNGELAWARKVFNEMPEKNVV--SWTTMITGYVQEGESESALKVFVEM 250
Query: 324 *ADK-VRPNQGTFVSVLSACSDLASLGEAKQIHQMISKTVYQ 446
D RPN+GTFV+VL ACSD+A LGE +Q+H +ISK+VYQ
Sbjct: 251 IKDGGARPNEGTFVNVLGACSDMAGLGEGQQVHLLISKSVYQ 292
Score = 57.0 bits (136), Expect = 3e-06
Identities = 34/95 (35%), Positives = 58/95 (61%), Gaps = 5/95 (5%)
Frame = +1
Query: 4 GKIDEARELFDLMPK-RNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQWS--- 171
G I +AR LFD + ++VV+W AM++GY + R+EEA +LFE MP +N + W+
Sbjct: 20 GLIVDARRLFDRVDAIKDVVTWTAMLSGYVRLKRIEEAERLFEVMPVKNV---VSWNTMI 76
Query: 172 -GFIHNGILKWAQKLFNELHKRNVLSLTSSLQRLL 273
G+ N + A ++F +H+RN++S + + L+
Sbjct: 77 DGYGKNREVDKAIEVFERMHERNMVSWNAVIAALV 111
>ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Vitis vinifera]
Length = 635
Score = 111 bits (277), Expect = 1e-22
Identities = 60/107 (56%), Positives = 78/107 (72%), Gaps = 1/107 (0%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERN-SHHGIQWSGF 177
NG+IDEAR LFD MP+RNVVSWNAM+TGYA+NLRL+EAL LFERMPER+ +G
Sbjct: 221 NGRIDEARLLFDRMPERNVVSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITGL 280
Query: 178 IHNGILKWAQKLFNELHKRNVLSLTSSLQRLLDTSNMGRGGTKDVLK 318
I NG L+ A+KLFNE+ K+NV+S T+ + T + G +++ LK
Sbjct: 281 IQNGDLRRARKLFNEMPKKNVISWTTMI-----TGCVQEGESEEALK 322
Score = 75.1 bits (183), Expect = 9e-12
Identities = 39/94 (41%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQW---- 168
+ KI +A +LF+ MP +NVVSWN M+ GYA+N R++ A+ LFE+MPERN + W
Sbjct: 128 SNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNV---VSWNTVM 184
Query: 169 SGFIHNGILKWAQKLFNELHKRNVLSLTSSLQRL 270
S G ++ A++LF+ + +R+V+S T+ + L
Sbjct: 185 SMLAQCGRIEEARRLFDRMPERDVISWTAMIAGL 218
Score = 71.2 bits (173), Expect = 1e-10
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Frame = +3
Query: 144 ELPSWNTMVRFHPQRNS*MGSKTV**VAQEKCFILDKFTTEVIGYLQHGQRRH*R--CSQ 317
+LPSWNTM+ Q ++ + +K I +TT + G +Q G+ S+
Sbjct: 269 DLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVI--SWTTMITGCVQEGESEEALKIFSR 326
Query: 318 EW*ADKVRPNQGTFVSVLSACSDLASLGEAKQIHQMISKTVYQ 446
+ +PNQGTFVSVL ACS+LA LGE +Q+HQ+ISKTVYQ
Sbjct: 327 MLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQ 369
Score = 62.0 bits (149), Expect = 8e-08
Identities = 32/86 (37%), Positives = 56/86 (65%), Gaps = 4/86 (4%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQWS--- 171
+G+I EAR LFD M + +V++W +++GY K +EEA +LF+R+ + + + W+
Sbjct: 65 DGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDAKK--NVVTWTAMV 122
Query: 172 -GFIHNGILKWAQKLFNELHKRNVLS 246
G+I + + A+KLFNE+ +NV+S
Sbjct: 123 GGYIRSNKISDAEKLFNEMPNKNVVS 148
>ref|XP_007028547.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
isoform 1 [Theobroma cacao]
gi|590635100|ref|XP_007028548.1| Pentatricopeptide
repeat (PPR) superfamily protein, putative isoform 1
[Theobroma cacao] gi|508717152|gb|EOY09049.1|
Pentatricopeptide repeat (PPR) superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|508717153|gb|EOY09050.1| Pentatricopeptide repeat
(PPR) superfamily protein, putative isoform 1 [Theobroma
cacao]
Length = 631
Score = 110 bits (274), Expect = 3e-22
Identities = 53/88 (60%), Positives = 72/88 (81%), Gaps = 1/88 (1%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERN-SHHGIQWSGF 177
NGKIDEAR +FD MP+RNVVSWNAM+TGY++N++L+EA +LFERMPERN S +GF
Sbjct: 217 NGKIDEARRVFDRMPERNVVSWNAMITGYSQNMKLDEAFELFERMPERNLSSWNAMITGF 276
Query: 178 IHNGILKWAQKLFNELHKRNVLSLTSSL 261
I NG LK A+KLF+++ ++NV+S T+ +
Sbjct: 277 IQNGELKRAEKLFDKVPRKNVVSWTTMI 304
Score = 70.9 bits (172), Expect = 2e-10
Identities = 39/94 (41%), Positives = 62/94 (65%), Gaps = 5/94 (5%)
Frame = +1
Query: 4 GKIDEARELFDLMP-KRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQWS--- 171
G I+EAR LFD + K+NVV+W AM++GY ++ R+ EA +LF+ MP +N + W+
Sbjct: 93 GLIEEARRLFDRVDSKKNVVTWTAMLSGYMRSNRILEAKRLFDEMPVKNV---VSWNTMV 149
Query: 172 -GFIHNGILKWAQKLFNELHKRNVLSLTSSLQRL 270
G++ NG++ A +LF E+ +RNV+S + L L
Sbjct: 150 DGYVQNGMVGKAFELFQEMPERNVVSWNTMLTAL 183
Score = 67.8 bits (164), Expect = 1e-09
Identities = 38/94 (40%), Positives = 59/94 (62%), Gaps = 4/94 (4%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQWSGFI 180
+ +I EA+ LFD MP +NVVSWN MV GY +N + +A +LF+ MPERN + W+ +
Sbjct: 124 SNRILEAKRLFDEMPVKNVVSWNTMVDGYVQNGMVGKAFELFQEMPERNV---VSWNTML 180
Query: 181 ----HNGILKWAQKLFNELHKRNVLSLTSSLQRL 270
G ++ A+ LF+ + KR+V+S T+ + L
Sbjct: 181 TALAQCGRVEDARGLFDRMPKRDVISWTAMVAGL 214
Score = 66.2 bits (160), Expect = 4e-09
Identities = 43/114 (37%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Frame = +3
Query: 111 SFKAF*EDA*EELPSWNTMVRFHPQRNS*MGSKTV**VAQEKCFILDKFTTEVIGYLQHG 290
+F+ F L SWN M+ Q ++ + K + +TT + GY+Q
Sbjct: 254 AFELFERMPERNLSSWNAMITGFIQNGELKRAEKLFDKVPRKNVV--SWTTMITGYVQDE 311
Query: 291 QRRH*R--CSQEW*ADKVRPNQGTFVSVLSACSDLASLGEAKQIHQMISKTVYQ 446
Q S+ D V+PN+GTFVSVLSACSDLA L E +Q+HQ ++KT+YQ
Sbjct: 312 QSEEALKIFSKMMAEDGVKPNEGTFVSVLSACSDLAGLFEGQQVHQTLAKTIYQ 365
Score = 61.2 bits (147), Expect = 1e-07
Identities = 33/103 (32%), Positives = 63/103 (61%), Gaps = 6/103 (5%)
Frame = +1
Query: 4 GKIDEARELFDLMPKRN--VVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQW--- 168
GKI + R+LFD MP R+ V++W A+++GY K +EEA +LF+R+ + + + W
Sbjct: 60 GKISQVRKLFDQMPDRDKDVITWTALISGYIKLGLIEEARRLFDRVDSKK--NVVTWTAM 117
Query: 169 -SGFIHNGILKWAQKLFNELHKRNVLSLTSSLQRLLDTSNMGR 294
SG++ + + A++LF+E+ +NV+S + + + +G+
Sbjct: 118 LSGYMRSNRILEAKRLFDEMPVKNVVSWNTMVDGYVQNGMVGK 160
Score = 57.0 bits (136), Expect = 3e-06
Identities = 23/45 (51%), Positives = 35/45 (77%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERM 135
NG++ A +LFD +P++NVVSW M+TGY ++ + EEALK+F +M
Sbjct: 279 NGELKRAEKLFDKVPRKNVVSWTTMITGYVQDEQSEEALKIFSKM 323
>ref|XP_004498123.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35030, mitochondrial-like [Cicer arietinum]
Length = 665
Score = 109 bits (272), Expect = 4e-22
Identities = 59/107 (55%), Positives = 78/107 (72%), Gaps = 1/107 (0%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERN-SHHGIQWSGF 177
NG+ID+ARELFD MP RNVVSWNAM+TGYA+N RL+EALKLFERMPER+ +GF
Sbjct: 218 NGRIDDARELFDRMPVRNVVSWNAMITGYAQNGRLDEALKLFERMPERDMPSWNTMITGF 277
Query: 178 IHNGILKWAQKLFNELHKRNVLSLTSSLQRLLDTSNMGRGGTKDVLK 318
I NG L A+KLF+E+ ++NV++ TS + T + G +++ LK
Sbjct: 278 IQNGDLNRAEKLFDEMPQKNVITWTSMM-----TGYVQHGLSEEALK 319
Score = 79.7 bits (195), Expect(2) = 2e-13
Identities = 43/92 (46%), Positives = 61/92 (66%), Gaps = 4/92 (4%)
Frame = +1
Query: 7 KIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQWSGFI-- 180
+I+EA LF MP RNVVSWN M+ GYA+N R +EAL LF RMPERN + W+ I
Sbjct: 127 RIEEAERLFYEMPVRNVVSWNTMIDGYARNGRTQEALDLFRRMPERNV---VSWNTIITA 183
Query: 181 --HNGILKWAQKLFNELHKRNVLSLTSSLQRL 270
H+G + AQ +F+++ +R+V+S T+ + L
Sbjct: 184 LAHSGRIDDAQGIFSKMQERDVVSWTTMVAGL 215
Score = 21.6 bits (44), Expect(2) = 2e-13
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 293 EEALKMFSRVVSRQSPA 343
+EALK+F R+ R P+
Sbjct: 253 DEALKLFERMPERDMPS 269
Score = 66.6 bits (161), Expect = 3e-09
Identities = 43/103 (41%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Frame = +3
Query: 144 ELPSWNTMVRFHPQRNS*MGSKTV**VAQEKCFILDKFTTEVIGYLQHG-QRRH*RCSQE 320
++PSWNTM+ Q ++ + +K I +T+ + GY+QHG + +
Sbjct: 266 DMPSWNTMITGFIQNGDLNRAEKLFDEMPQKNVIT--WTSMMTGYVQHGLSEEALKIFNK 323
Query: 321 W*A-DKVRPNQGTFVSVLSACSDLASLGEAKQIHQMISKTVYQ 446
A D ++P GTFV+VL ACSDLA L E +QIHQMISKTV+Q
Sbjct: 324 MQANDGLKPTTGTFVTVLGACSDLAGLIEGQQIHQMISKTVFQ 366
Score = 63.5 bits (153), Expect = 3e-08
Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQW---- 168
NG+ EA +LF MP+RNVVSWN ++T A + R+++A +F +M ER+ + W
Sbjct: 156 NGRTQEALDLFRRMPERNVVSWNTIITALAHSGRIDDAQGIFSKMQERDV---VSWTTMV 212
Query: 169 SGFIHNGILKWAQKLFNELHKRNVLS 246
+G NG + A++LF+ + RNV+S
Sbjct: 213 AGLSKNGRIDDARELFDRMPVRNVVS 238
Score = 61.2 bits (147), Expect = 1e-07
Identities = 36/86 (41%), Positives = 55/86 (63%), Gaps = 5/86 (5%)
Frame = +1
Query: 4 GKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERM-PERNSHHGIQW---- 168
GKIDEAR++FD M +R++ W M++GY K ++EA KLF+R E+N I W
Sbjct: 63 GKIDEARKVFDEMSERDICLWTTMISGYIKCGMIKEARKLFDRSDAEKNV---IVWTAMV 119
Query: 169 SGFIHNGILKWAQKLFNELHKRNVLS 246
SG++ ++ A++LF E+ RNV+S
Sbjct: 120 SGYVKLNRIEEAERLFYEMPVRNVVS 145
>ref|XP_004308620.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 714
Score = 104 bits (260), Expect = 1e-20
Identities = 53/88 (60%), Positives = 70/88 (79%), Gaps = 1/88 (1%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERN-SHHGIQWSGF 177
NG++DEARE+FD MP+RNVVSWNAMVTGYA+N RLEEAL+LFERMPER+ +GF
Sbjct: 219 NGRVDEAREVFDRMPRRNVVSWNAMVTGYAQNGRLEEALELFERMPERDMPSWNTMVTGF 278
Query: 178 IHNGILKWAQKLFNELHKRNVLSLTSSL 261
I NG L+ A +LF ++ ++NV+S T+ +
Sbjct: 279 IQNGDLERAWELFVQMPQKNVISWTTMI 306
Score = 74.7 bits (182), Expect = 1e-11
Identities = 40/92 (43%), Positives = 61/92 (66%), Gaps = 4/92 (4%)
Frame = +1
Query: 7 KIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQW----SG 174
+++EA LF MP RNVVSWN M+ GYA++ R++EAL+LFERMPERN + W +
Sbjct: 128 RLEEAEMLFYQMPVRNVVSWNTMIDGYARSRRVDEALELFERMPERNV---VSWNTVLTA 184
Query: 175 FIHNGILKWAQKLFNELHKRNVLSLTSSLQRL 270
G ++ A++LF + +R+V+S T+ + L
Sbjct: 185 LAQCGRIEEARRLFGLMPERDVISWTAMVAGL 216
Score = 68.6 bits (166), Expect = 9e-10
Identities = 44/103 (42%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Frame = +3
Query: 144 ELPSWNTMVRFHPQRNS*MGSKTV**VAQEKCFILDKFTTEVIGYLQHGQRRH*RC--SQ 317
++PSWNTMV Q + + +K I +TT + GY+Q G+ S+
Sbjct: 267 DMPSWNTMVTGFIQNGDLERAWELFVQMPQKNVI--SWTTMITGYVQDGRNEEALMIFSK 324
Query: 318 EW*ADKVRPNQGTFVSVLSACSDLASLGEAKQIHQMISKTVYQ 446
+ RPN+GTFVS+LSACS+LA L E +Q+HQMI KTVYQ
Sbjct: 325 MVVDNGARPNEGTFVSILSACSNLAGLCEGRQMHQMIIKTVYQ 367
Score = 60.5 bits (145), Expect = 2e-07
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQWS--- 171
+G+I EAR++FD MP+R+VV+W ++T Y K+ LEEA LF+R + I W+
Sbjct: 63 DGRIREARQVFDEMPERDVVTWTTVITAYVKSGMLEEARSLFDRADA--VKNVITWTALV 120
Query: 172 -GFIHNGILKWAQKLFNELHKRNVLS 246
G+I L+ A+ LF ++ RNV+S
Sbjct: 121 GGYIRLRRLEEAEMLFYQMPVRNVVS 146
>ref|XP_007204422.1| hypothetical protein PRUPE_ppb002215mg [Prunus persica]
gi|462399953|gb|EMJ05621.1| hypothetical protein
PRUPE_ppb002215mg [Prunus persica]
Length = 634
Score = 104 bits (260), Expect = 1e-20
Identities = 53/88 (60%), Positives = 67/88 (76%), Gaps = 1/88 (1%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERN-SHHGIQWSGF 177
NG IDEARE FD MPKRNVVSWNAM+TGY +N+RL+EAL+LFERMP R+ +GF
Sbjct: 222 NGMIDEAREFFDRMPKRNVVSWNAMITGYTQNMRLDEALELFERMPGRDMPSWNTMITGF 281
Query: 178 IHNGILKWAQKLFNELHKRNVLSLTSSL 261
I NG LK AQ+LF + ++NV+S T+ +
Sbjct: 282 IQNGDLKRAQELFIRMPQKNVISWTTMI 309
Score = 72.4 bits (176), Expect = 6e-11
Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 4/87 (4%)
Frame = +1
Query: 7 KIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQW----SG 174
++ EA LF MP +NVVSWN M+ GYA+N +++ AL+LFERMPE+N + W +
Sbjct: 131 QMKEAERLFYQMPVKNVVSWNTMIDGYARNCQVDMALELFERMPEKNV---VSWNTVLTA 187
Query: 175 FIHNGILKWAQKLFNELHKRNVLSLTS 255
H+G ++ A+ FN + +R+V+S T+
Sbjct: 188 LAHSGRIEEARTRFNLMPERDVISWTA 214
Score = 72.0 bits (175), Expect = 8e-11
Identities = 45/102 (44%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Frame = +3
Query: 144 ELPSWNTMVRFHPQRNS*MGSKTV**VAQEKCFILDKFTTEVIGYLQHGQRRH*RC--SQ 317
++PSWNTM+ Q ++ + +K I +TT + GY+Q GQ S+
Sbjct: 270 DMPSWNTMITGFIQNGDLKRAQELFIRMPQKNVI--SWTTMITGYVQDGQNEKALMFFSK 327
Query: 318 EW*ADKVRPNQGTFVSVLSACSDLASLGEAKQIHQMISKTVY 443
+ V+PNQGTFVSVLSACS+LA E +QIHQMISKTV+
Sbjct: 328 MLVDNGVKPNQGTFVSVLSACSNLAGFSEGQQIHQMISKTVH 369
Score = 70.5 bits (171), Expect = 2e-10
Identities = 38/86 (44%), Positives = 56/86 (65%), Gaps = 4/86 (4%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQW---- 168
N ++D A ELF+ MP++NVVSWN ++T A + R+EEA F MPER+ I W
Sbjct: 160 NCQVDMALELFERMPEKNVVSWNTVLTALAHSGRIEEARTRFNLMPERDV---ISWTAMV 216
Query: 169 SGFIHNGILKWAQKLFNELHKRNVLS 246
+GF NG++ A++ F+ + KRNV+S
Sbjct: 217 AGFSRNGMIDEAREFFDRMPKRNVVS 242
Score = 60.5 bits (145), Expect = 2e-07
Identities = 33/86 (38%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQW---- 168
+GK EAR++FD MP ++VV+W ++TGY + +EEA LF+R+ + I W
Sbjct: 66 DGKFREARQVFDGMPDKDVVTWTTVITGYIRCGMMEEARSLFDRVDAKKD--VITWTALV 123
Query: 169 SGFIHNGILKWAQKLFNELHKRNVLS 246
SG+I +K A++LF ++ +NV+S
Sbjct: 124 SGYIRLKQMKEAERLFYQMPVKNVVS 149
>gb|EXB41187.1| hypothetical protein L484_005223 [Morus notabilis]
Length = 622
Score = 104 bits (259), Expect = 1e-20
Identities = 52/88 (59%), Positives = 67/88 (76%), Gaps = 1/88 (1%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERN-SHHGIQWSGF 177
NG+IDEAR +FD MP +NVVSWNAM+TGYA+N+RL EA +LFERMPERN S +GF
Sbjct: 212 NGRIDEARVVFDRMPVQNVVSWNAMITGYAQNMRLNEAFELFERMPERNLSSWNTMITGF 271
Query: 178 IHNGILKWAQKLFNELHKRNVLSLTSSL 261
I NG LK A LFN++ ++N +S T+ +
Sbjct: 272 IQNGELKRASNLFNKMPEKNSISWTTMI 299
Score = 75.9 bits (185), Expect = 6e-12
Identities = 48/113 (42%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Frame = +3
Query: 111 SFKAF*EDA*EELPSWNTMVRFHPQRNS*MGSKTV**VAQEKCFILDKFTTEVIGYLQHG 290
+F+ F L SWNTM+ Q + + EK I +TT + GY+Q G
Sbjct: 249 AFELFERMPERNLSSWNTMITGFIQNGELKRASNLFNKMPEKNSI--SWTTMISGYIQDG 306
Query: 291 QRRH*-RCSQEW*ADKVRPNQGTFVSVLSACSDLASLGEAKQIHQMISKTVYQ 446
Q + + D +RPN+ TF SVLSACS+LA LGE +QIHQMISKTV+Q
Sbjct: 307 QNEEALKMFTKMVVDGIRPNEATFASVLSACSNLAGLGEGQQIHQMISKTVFQ 359
Score = 72.8 bits (177), Expect = 5e-11
Identities = 38/86 (44%), Positives = 58/86 (67%), Gaps = 4/86 (4%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQW---- 168
NG+++ A LFD MP+RNVVSWN ++T A++ R+EEA +LF+ MPER+ I W
Sbjct: 150 NGRVNSALGLFDRMPERNVVSWNTIITALAQSGRMEEARRLFDMMPERDV---ISWTTMV 206
Query: 169 SGFIHNGILKWAQKLFNELHKRNVLS 246
+GF NG + A+ +F+ + +NV+S
Sbjct: 207 AGFSRNGRIDEARVVFDRMPVQNVVS 232
Score = 70.1 bits (170), Expect = 3e-10
Identities = 38/87 (43%), Positives = 57/87 (65%), Gaps = 4/87 (4%)
Frame = +1
Query: 7 KIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQWSGFI-- 180
+I EA LF MP +NVVSWN M+ GY +N R+ AL LF+RMPERN + W+ I
Sbjct: 121 RIKEAERLFFEMPVKNVVSWNTMIEGYFQNGRVNSALGLFDRMPERNV---VSWNTIITA 177
Query: 181 --HNGILKWAQKLFNELHKRNVLSLTS 255
+G ++ A++LF+ + +R+V+S T+
Sbjct: 178 LAQSGRMEEARRLFDMMPERDVISWTT 204
Score = 63.9 bits (154), Expect = 2e-08
Identities = 33/92 (35%), Positives = 59/92 (64%), Gaps = 4/92 (4%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQW---- 168
+G+I +AR++FD MP R+V++W ++TGYA+ +EEA KLF+R + I W
Sbjct: 56 SGRIGDARQVFDEMPDRDVITWTTVITGYARCGMIEEARKLFDRADAKKD--VITWTVMV 113
Query: 169 SGFIHNGILKWAQKLFNELHKRNVLSLTSSLQ 264
+G++ +K A++LF E+ +NV+S + ++
Sbjct: 114 NGYLRLRRIKEAERLFFEMPVKNVVSWNTMIE 145
Score = 62.4 bits (150), Expect = 6e-08
Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 5/100 (5%)
Frame = +1
Query: 4 GKIDEARELFDLMP-KRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQWS--- 171
G I+EAR+LFD K++V++W MV GY + R++EA +LF MP +N + W+
Sbjct: 88 GMIEEARKLFDRADAKKDVITWTVMVNGYLRLRRIKEAERLFFEMPVKNV---VSWNTMI 144
Query: 172 -GFIHNGILKWAQKLFNELHKRNVLSLTSSLQRLLDTSNM 288
G+ NG + A LF+ + +RNV+S + + L + M
Sbjct: 145 EGYFQNGRVNSALGLFDRMPERNVVSWNTIITALAQSGRM 184
>ref|XP_002529164.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223531388|gb|EEF33223.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 453
Score = 104 bits (259), Expect = 1e-20
Identities = 52/88 (59%), Positives = 69/88 (78%), Gaps = 1/88 (1%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERN-SHHGIQWSGF 177
NG+IDEAR++FD MP+RNVVSWNAM+TGYAKN+RL EA +LFERMPER+ +GF
Sbjct: 168 NGRIDEARKIFDKMPERNVVSWNAMITGYAKNMRLVEAFELFERMPERDLPSWNTMITGF 227
Query: 178 IHNGILKWAQKLFNELHKRNVLSLTSSL 261
I N LK A+KL +E+ ++NV+S T+ +
Sbjct: 228 IQNKELKLARKLLDEMPEKNVVSWTTMI 255
Score = 75.9 bits (185), Expect = 6e-12
Identities = 49/114 (42%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Frame = +3
Query: 111 SFKAF*EDA*EELPSWNTMVRFHPQRNS*MGSKTV**VAQEKCFILDKFTTEVIGYLQHG 290
+F+ F +LPSWNTM+ Q ++ + EK + +TT + GY+Q G
Sbjct: 205 AFELFERMPERDLPSWNTMITGFIQNKELKLARKLLDEMPEKNVV--SWTTMITGYVQEG 262
Query: 291 QRRH*-RCSQEW*ADK-VRPNQGTFVSVLSACSDLASLGEAKQIHQMISKTVYQ 446
+ E D V PN+GTFV+VL ACSDLA LGE +Q+HQMISKTVYQ
Sbjct: 263 ESEAALNIFMEMIRDGGVMPNEGTFVNVLGACSDLAGLGEGQQVHQMISKTVYQ 316
Score = 58.2 bits (139), Expect = 1e-06
Identities = 34/99 (34%), Positives = 60/99 (60%), Gaps = 10/99 (10%)
Frame = +1
Query: 4 GKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQWSGFIH 183
GKI+EAR++FD M +R+V++W ++TGY K + EA +LF+R + + W+ +
Sbjct: 69 GKINEARQVFDRMLERDVITWTTVITGYIKCRLIVEARRLFDRADAMK--NVVTWTAMVS 126
Query: 184 -----NGILK-----WAQKLFNELHKRNVLSLTSSLQRL 270
N +L+ A++LF+E+ KR+V+S T+ + L
Sbjct: 127 GYMRLNQVLEAERVDEARRLFDEMPKRDVISWTAMVAGL 165
>ref|XP_006663406.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Oryza brachyantha]
Length = 618
Score = 102 bits (253), Expect = 7e-20
Identities = 52/92 (56%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERN-SHHGIQWSGF 177
NG +DEAR LFD MPKRNVVSWNAM++GYA+N R+EEAL LF +MP R+ + I +GF
Sbjct: 206 NGSVDEARVLFDAMPKRNVVSWNAMISGYARNHRIEEALDLFTKMPVRDVASWNIMITGF 265
Query: 178 IHNGILKWAQKLFNELHKRNVLSLTSSLQRLL 273
I N LK A++LF+E+ KRNV++ T+ + L
Sbjct: 266 IQNKDLKSARELFDEMPKRNVITWTTMMNGYL 297
Score = 61.6 bits (148), Expect = 1e-07
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Frame = +1
Query: 10 IDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERN-SHHGIQWSGFIHN 186
+DEA LF+ MP+RN+VSWN M+ Y R+++A LF MP R+ I + + +
Sbjct: 116 VDEAEALFERMPERNIVSWNTMLEAYTTVGRVQDAYALFNSMPVRDCGSWNILLAALVRS 175
Query: 187 GILKWAQKLFNELHKRNVLSLTSSLQRLLDTSNMGRGGTKD 309
G L+ A ++F + R+V+S T+ + S + R G+ D
Sbjct: 176 GNLEKACQVFERMPARDVMSWTTMV------SGLARNGSVD 210
Score = 58.2 bits (139), Expect = 1e-06
Identities = 32/85 (37%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Frame = +1
Query: 4 GKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQW----S 171
G++ +A LF+ MP R+ SWN ++ ++ LE+A ++FERMP R+ + W S
Sbjct: 145 GRVQDAYALFNSMPVRDCGSWNILLAALVRSGNLEKACQVFERMPARDV---MSWTTMVS 201
Query: 172 GFIHNGILKWAQKLFNELHKRNVLS 246
G NG + A+ LF+ + KRNV+S
Sbjct: 202 GLARNGSVDEARVLFDAMPKRNVVS 226
Score = 57.0 bits (136), Expect = 3e-06
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Frame = +1
Query: 4 GKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQW----S 171
G+I +AR LFD P R+VVSW AMV Y + L EA LF+R R + + W S
Sbjct: 51 GRILDARRLFDGTPDRDVVSWTAMVAAYVRQGMLREARALFDRPDAR--RNVVTWTALMS 108
Query: 172 GFIHNGILKWAQKLFNELHKRNVLSLTSSLQ 264
G+ + A+ LF + +RN++S + L+
Sbjct: 109 GYARAHCVDEAEALFERMPERNIVSWNTMLE 139
>ref|XP_006587960.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like isoform X2 [Glycine max]
gi|571479769|ref|XP_006587961.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like isoform X3 [Glycine max]
gi|571479771|ref|XP_003533693.2| PREDICTED:
pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like isoform X1 [Glycine max]
Length = 618
Score = 102 bits (253), Expect = 7e-20
Identities = 49/88 (55%), Positives = 68/88 (77%), Gaps = 1/88 (1%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERN-SHHGIQWSGF 177
NG++++AR LFD MP RNVVSWNAM+TGYA+N RL+EAL+LF+RMPER+ +GF
Sbjct: 207 NGRVEDARALFDQMPVRNVVSWNAMITGYAQNRRLDEALQLFQRMPERDMPSWNTMITGF 266
Query: 178 IHNGILKWAQKLFNELHKRNVLSLTSSL 261
I NG L A+KLF E+ ++NV++ T+ +
Sbjct: 267 IQNGELNRAEKLFGEMQEKNVITWTAMM 294
Score = 72.4 bits (176), Expect = 6e-11
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 4/92 (4%)
Frame = +1
Query: 7 KIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQW----SG 174
++ EA LF MP RNVVSWN MV GYA+N ++AL LF RMPERN + W +
Sbjct: 116 QVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRRMPERNV---VSWNTIITA 172
Query: 175 FIHNGILKWAQKLFNELHKRNVLSLTSSLQRL 270
+ G ++ AQ+LF+++ R+V+S T+ + L
Sbjct: 173 LVQCGRIEDAQRLFDQMKDRDVVSWTTMVAGL 204
Score = 72.0 bits (175), Expect = 8e-11
Identities = 46/103 (44%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
Frame = +3
Query: 144 ELPSWNTMVRFHPQRNS*MGSKTV**VAQEKCFILDKFTTEVIGYLQHG-QRRH*RCSQE 320
++PSWNTM+ Q ++ + QEK I +T + GY+QHG R +
Sbjct: 255 DMPSWNTMITGFIQNGELNRAEKLFGEMQEKNVIT--WTAMMTGYVQHGLSEEALRVFIK 312
Query: 321 W*A-DKVRPNQGTFVSVLSACSDLASLGEAKQIHQMISKTVYQ 446
A ++++PN GTFV+VL ACSDLA L E +QIHQMISKTV+Q
Sbjct: 313 MLATNELKPNTGTFVTVLGACSDLAGLTEGQQIHQMISKTVFQ 355
Score = 64.7 bits (156), Expect = 1e-08
Identities = 39/95 (41%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Frame = +1
Query: 4 GKIDEARELFDLMP-KRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQWS--- 171
G I EAR+LFD K+NVV+W AMV GY K +++EA +LF MP RN + W+
Sbjct: 83 GMIREARKLFDRWDAKKNVVTWTAMVNGYIKFNQVKEAERLFYEMPLRNV---VSWNTMV 139
Query: 172 -GFIHNGILKWAQKLFNELHKRNVLSLTSSLQRLL 273
G+ NG+ + A LF + +RNV+S + + L+
Sbjct: 140 DGYARNGLTQQALDLFRRMPERNVVSWNTIITALV 174
Score = 62.0 bits (149), Expect = 8e-08
Identities = 33/86 (38%), Positives = 55/86 (63%), Gaps = 4/86 (4%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQW---- 168
NG +A +LF MP+RNVVSWN ++T + R+E+A +LF++M +R+ + W
Sbjct: 145 NGLTQQALDLFRRMPERNVVSWNTIITALVQCGRIEDAQRLFDQMKDRDV---VSWTTMV 201
Query: 169 SGFIHNGILKWAQKLFNELHKRNVLS 246
+G NG ++ A+ LF+++ RNV+S
Sbjct: 202 AGLAKNGRVEDARALFDQMPVRNVVS 227
Score = 59.7 bits (143), Expect = 4e-07
Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Frame = +1
Query: 4 GKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQW----S 171
G+ID AR++F+ MP+R++ W M+TGY K + EA KLF+R + + + W +
Sbjct: 52 GEIDYARKVFEEMPERDIGLWTTMITGYLKCGMIREARKLFDRWDAKK--NVVTWTAMVN 109
Query: 172 GFIHNGILKWAQKLFNELHKRNVLS 246
G+I +K A++LF E+ RNV+S
Sbjct: 110 GYIKFNQVKEAERLFYEMPLRNVVS 134
>ref|XP_007161435.1| hypothetical protein PHAVU_001G068400g [Phaseolus vulgaris]
gi|561034899|gb|ESW33429.1| hypothetical protein
PHAVU_001G068400g [Phaseolus vulgaris]
Length = 616
Score = 100 bits (249), Expect = 2e-19
Identities = 50/88 (56%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERN-SHHGIQWSGF 177
NG++++AR LFD MP RNVVSWN MVTGYA+N RL EAL+LF+RMPERN +GF
Sbjct: 204 NGRVEDARALFDQMPVRNVVSWNVMVTGYAQNGRLNEALELFQRMPERNMPSWNTMITGF 263
Query: 178 IHNGILKWAQKLFNELHKRNVLSLTSSL 261
I NG L A+KLF E+ +NV++ T+ +
Sbjct: 264 IQNGELNHAEKLFREMRVKNVITWTAMM 291
Score = 72.0 bits (175), Expect = 8e-11
Identities = 41/92 (44%), Positives = 58/92 (63%), Gaps = 4/92 (4%)
Frame = +1
Query: 7 KIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQWSGFIHN 186
++ EA LF MP RNVVSWN MV GYA+N ++AL LF RMPERN + W+ I
Sbjct: 113 QVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRRMPERNV---VSWNTIITT 169
Query: 187 ----GILKWAQKLFNELHKRNVLSLTSSLQRL 270
G + AQ+LF+++ +R+V+S T+ + L
Sbjct: 170 LVQCGKVDDAQRLFDQMKERDVVSWTTMVAGL 201
Score = 69.3 bits (168), Expect = 5e-10
Identities = 43/102 (42%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Frame = +3
Query: 147 LPSWNTMVRFHPQRNS*MGSKTV**VAQEKCFILDKFTTEVIGYLQHG--QRRH*RCSQE 320
+PSWNTM+ Q ++ + + K I +T + GY+QHG + ++
Sbjct: 253 MPSWNTMITGFIQNGELNHAEKLFREMRVKNVIT--WTAMMTGYVQHGLSEEAVKVFNKM 310
Query: 321 W*ADKVRPNQGTFVSVLSACSDLASLGEAKQIHQMISKTVYQ 446
AD ++PN GTFV+VL ACSDLA L E +QIHQMISKT++Q
Sbjct: 311 LAADGLKPNTGTFVTVLGACSDLAGLTEGQQIHQMISKTIFQ 352
Score = 64.3 bits (155), Expect = 2e-08
Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 5/95 (5%)
Frame = +1
Query: 4 GKIDEARELFD-LMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQWS--- 171
G I EAR+LFD L K+NVV+W AM+ GY + +++EA +LF MP RN + W+
Sbjct: 80 GMIREARKLFDRLDAKKNVVTWTAMIKGYIRLNQVKEAERLFYEMPLRNV---VSWNTMV 136
Query: 172 -GFIHNGILKWAQKLFNELHKRNVLSLTSSLQRLL 273
G+ NG+ + A LF + +RNV+S + + L+
Sbjct: 137 DGYARNGLTQQALDLFRRMPERNVVSWNTIITTLV 171
Score = 60.1 bits (144), Expect = 3e-07
Identities = 33/86 (38%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQWS--- 171
+GKID+AR++FD M R++ W M+ GY K + EA KLF+R+ + + + W+
Sbjct: 48 DGKIDDARKVFDKMLDRDIGLWTTMINGYLKCGMIREARKLFDRLDAKK--NVVTWTAMI 105
Query: 172 -GFIHNGILKWAQKLFNELHKRNVLS 246
G+I +K A++LF E+ RNV+S
Sbjct: 106 KGYIRLNQVKEAERLFYEMPLRNVVS 131
Score = 59.3 bits (142), Expect = 5e-07
Identities = 32/86 (37%), Positives = 55/86 (63%), Gaps = 4/86 (4%)
Frame = +1
Query: 1 NGKIDEARELFDLMPKRNVVSWNAMVTGYAKNLRLEEALKLFERMPERNSHHGIQW---- 168
NG +A +LF MP+RNVVSWN ++T + ++++A +LF++M ER+ + W
Sbjct: 142 NGLTQQALDLFRRMPERNVVSWNTIITTLVQCGKVDDAQRLFDQMKERDV---VSWTTMV 198
Query: 169 SGFIHNGILKWAQKLFNELHKRNVLS 246
+G NG ++ A+ LF+++ RNV+S
Sbjct: 199 AGLSKNGRVEDARALFDQMPVRNVVS 224