BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00031191
         (219 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...    90   4e-16
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]    89   8e-16
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...    89   8e-16
ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-li...    87   2e-15
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]      87   3e-15
emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]     87   3e-15
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu...    86   4e-15
dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]     86   5e-15
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu...    85   1e-14
gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot...    84   2e-14
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]      84   2e-14
ref|XP_007225440.1| hypothetical protein PRUPE_ppa000422mg [Prun...    84   2e-14
ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma ca...    83   4e-14
gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutu...    82   8e-14
gb|AHO49120.1| RNA-dependent RNA polymerase 6 [Carica papaya]          81   1e-13
ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lyco...    80   2e-13
ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-li...    80   3e-13
ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-li...    80   3e-13
ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-li...    80   4e-13
gb|AGU69384.1| RNA-dependendent RNA polymerase 6-like protein [L...    79   5e-13

>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 41/73 (56%), Positives = 52/73 (71%)
 Frame = +1

Query: 1   INKRRRNIKPFKFCKVHVQIGTLFSEHEYWVGWKAPASGVDMVVDPFDNTCRILFTEMTA 180
           +N+RRR   PFKF  V ++IG L S  EY+ GW+ P+SGVD +VDPFD TC+ LFT+ TA
Sbjct: 120 LNQRRRTTFPFKFPDVRLEIGILVSRDEYFAGWRGPSSGVDFLVDPFDGTCKFLFTKDTA 179

Query: 181 FSLNGKEESAVIK 219
           FS  G  + AVIK
Sbjct: 180 FSFKGMPKHAVIK 192


>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
          Length = 1197

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 38/73 (52%), Positives = 53/73 (72%)
 Frame = +1

Query: 1   INKRRRNIKPFKFCKVHVQIGTLFSEHEYWVGWKAPASGVDMVVDPFDNTCRILFTEMTA 180
           +N+RRR   PFKF  V V++G L S+H++ VGW+ P +GVD +VDPF+ TC+ILFT+ T 
Sbjct: 119 LNQRRRTTMPFKFSDVSVEMGVLVSKHDFVVGWRGPRTGVDFLVDPFNGTCKILFTKDTV 178

Query: 181 FSLNGKEESAVIK 219
           FS  G+   A+IK
Sbjct: 179 FSFRGEARHAIIK 191


>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
           gi|223545464|gb|EEF46969.1| RNA-dependent RNA
           polymerase, putative [Ricinus communis]
          Length = 1203

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 41/73 (56%), Positives = 49/73 (67%)
 Frame = +1

Query: 1   INKRRRNIKPFKFCKVHVQIGTLFSEHEYWVGWKAPASGVDMVVDPFDNTCRILFTEMTA 180
           +N+RRR   PFK   VHV+IGTL S  E+ VGW+ P SGVD +VDPFD  C+  FT  TA
Sbjct: 120 LNQRRRTTIPFKLSDVHVEIGTLVSRDEFLVGWRGPPSGVDFLVDPFDGKCKFCFTRDTA 179

Query: 181 FSLNGKEESAVIK 219
           FS  G  E AVI+
Sbjct: 180 FSFKGTTEHAVIR 192


>ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Solanum
           tuberosum] gi|565360032|ref|XP_006346785.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X2 [Solanum
           tuberosum]
          Length = 1198

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 41/73 (56%), Positives = 52/73 (71%)
 Frame = +1

Query: 1   INKRRRNIKPFKFCKVHVQIGTLFSEHEYWVGWKAPASGVDMVVDPFDNTCRILFTEMTA 180
           +NKRRR I PFKF  V V+IG L S  ++ VGW+ P SGV+ +VDPF+ TC+ILFT  TA
Sbjct: 119 MNKRRRTIMPFKFSDVGVEIGVLVSNDDFVVGWRGPHSGVNFLVDPFNGTCKILFTRDTA 178

Query: 181 FSLNGKEESAVIK 219
           F   G+ + AVIK
Sbjct: 179 FCFKGEGKHAVIK 191


>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 38/73 (52%), Positives = 53/73 (72%)
 Frame = +1

Query: 1   INKRRRNIKPFKFCKVHVQIGTLFSEHEYWVGWKAPASGVDMVVDPFDNTCRILFTEMTA 180
           +N+RRR   PFKF  V V++G L S+ ++ VGW+ P +GVD +VDPF+ TC+ILFT+ TA
Sbjct: 119 LNQRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGTCKILFTKDTA 178

Query: 181 FSLNGKEESAVIK 219
           FS  G+   A+IK
Sbjct: 179 FSFRGEARHAIIK 191


>emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 38/73 (52%), Positives = 53/73 (72%)
 Frame = +1

Query: 1   INKRRRNIKPFKFCKVHVQIGTLFSEHEYWVGWKAPASGVDMVVDPFDNTCRILFTEMTA 180
           +N+RRR   PFKF  V V++G L S+ ++ VGW+ P +GVD +VDPF+ TC+ILFT+ TA
Sbjct: 119 LNQRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGTCKILFTKDTA 178

Query: 181 FSLNGKEESAVIK 219
           FS  G+   A+IK
Sbjct: 179 FSFRGEARHAIIK 191


>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
           gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
           protein [Populus trichocarpa]
          Length = 1198

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 40/73 (54%), Positives = 49/73 (67%)
 Frame = +1

Query: 1   INKRRRNIKPFKFCKVHVQIGTLFSEHEYWVGWKAPASGVDMVVDPFDNTCRILFTEMTA 180
           +N+RRR   PFK   V V+IGTL S  E++VGW+ P +GVD +VDPFD TCR  F+  TA
Sbjct: 120 LNQRRRKTTPFKLSGVGVEIGTLVSRDEFFVGWRGPPTGVDFLVDPFDGTCRFCFSRNTA 179

Query: 181 FSLNGKEESAVIK 219
           FS     E AVIK
Sbjct: 180 FSFKSTAEHAVIK 192


>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 38/73 (52%), Positives = 52/73 (71%)
 Frame = +1

Query: 1   INKRRRNIKPFKFCKVHVQIGTLFSEHEYWVGWKAPASGVDMVVDPFDNTCRILFTEMTA 180
           +N+RRR   PFKF  V V++G L S+ ++ VGW+ P +GVD  VDPF+ TC+ILFT+ TA
Sbjct: 119 LNQRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFFVDPFNGTCKILFTKDTA 178

Query: 181 FSLNGKEESAVIK 219
           FS  G+   A+IK
Sbjct: 179 FSFRGEARHAIIK 191


>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
           gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
           protein [Populus trichocarpa]
          Length = 1200

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 39/73 (53%), Positives = 48/73 (65%)
 Frame = +1

Query: 1   INKRRRNIKPFKFCKVHVQIGTLFSEHEYWVGWKAPASGVDMVVDPFDNTCRILFTEMTA 180
           +N+RRR   PFK   V  +IG L S  E++VGW+ P SGVD +VDPFD TC+  F+  TA
Sbjct: 120 LNQRRRTTTPFKLSDVGFEIGNLVSRDEFFVGWRGPPSGVDFLVDPFDGTCKFCFSRNTA 179

Query: 181 FSLNGKEESAVIK 219
           FSL    E AVIK
Sbjct: 180 FSLKSTSEHAVIK 192


>gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
          Length = 1197

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 37/73 (50%), Positives = 52/73 (71%)
 Frame = +1

Query: 1   INKRRRNIKPFKFCKVHVQIGTLFSEHEYWVGWKAPASGVDMVVDPFDNTCRILFTEMTA 180
           +N+RRR   PFKF  V V++G L S+ ++ VGW+ P +GVD  VDPF+  C+ILFT+ TA
Sbjct: 119 LNQRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFFVDPFNGACKILFTKDTA 178

Query: 181 FSLNGKEESAVIK 219
           FS  G+ + A+IK
Sbjct: 179 FSFRGEAKHAIIK 191


>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
          Length = 1197

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 36/73 (49%), Positives = 52/73 (71%)
 Frame = +1

Query: 1   INKRRRNIKPFKFCKVHVQIGTLFSEHEYWVGWKAPASGVDMVVDPFDNTCRILFTEMTA 180
           +N+RRR   PFKF  V +++G L S+ ++ VGW+ P +GVD +VDPF+  C+ILFT+ TA
Sbjct: 119 LNQRRRTTMPFKFSDVSIEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGACKILFTKDTA 178

Query: 181 FSLNGKEESAVIK 219
           FS  G+   A+IK
Sbjct: 179 FSFRGEARHAIIK 191


>ref|XP_007225440.1| hypothetical protein PRUPE_ppa000422mg [Prunus persica]
           gi|462422376|gb|EMJ26639.1| hypothetical protein
           PRUPE_ppa000422mg [Prunus persica]
          Length = 1196

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 37/73 (50%), Positives = 49/73 (67%)
 Frame = +1

Query: 1   INKRRRNIKPFKFCKVHVQIGTLFSEHEYWVGWKAPASGVDMVVDPFDNTCRILFTEMTA 180
           +N+RRR   PFK   VHV+IG+L  + E++  W+ P  GVD +VDPFD TC+  FT  TA
Sbjct: 119 LNRRRRTKTPFKLSDVHVEIGSLVRQDEFFASWRGPPYGVDFIVDPFDGTCKFCFTMDTA 178

Query: 181 FSLNGKEESAVIK 219
           FS  G ++ AVIK
Sbjct: 179 FSFKGTKKHAVIK 191


>ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
           gi|508782234|gb|EOY29490.1| RNA-dependent RNA polymerase
           6 [Theobroma cacao]
          Length = 1197

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 38/73 (52%), Positives = 48/73 (65%)
 Frame = +1

Query: 1   INKRRRNIKPFKFCKVHVQIGTLFSEHEYWVGWKAPASGVDMVVDPFDNTCRILFTEMTA 180
           +N+RRRN  PFK   V + IG + S  E++VGW+ P  GVD +VDPFD TC+  F+  TA
Sbjct: 120 LNRRRRNTTPFKLSDVCLDIGGMVSRDEFFVGWRGPPFGVDFLVDPFDGTCKFCFSRDTA 179

Query: 181 FSLNGKEESAVIK 219
           FS  G  E AVIK
Sbjct: 180 FSFKGTTEYAVIK 192


>gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum]
           gi|295885034|gb|ADG57592.1| RNA-dependent RNA polymerase
           6 [Gossypium hirsutum]
          Length = 1196

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 39/73 (53%), Positives = 50/73 (68%)
 Frame = +1

Query: 1   INKRRRNIKPFKFCKVHVQIGTLFSEHEYWVGWKAPASGVDMVVDPFDNTCRILFTEMTA 180
           +N+RRR+  PFK   V ++IGTL S  E+ VGW+ P SGV+ +VDPFD TC+  F+  TA
Sbjct: 120 LNRRRRDTTPFKLPDVSLEIGTLASCDEFIVGWRGPPSGVEFLVDPFDCTCKFCFSRDTA 179

Query: 181 FSLNGKEESAVIK 219
           FS  G  E AVIK
Sbjct: 180 FSFKGTNEHAVIK 192


>gb|AHO49120.1| RNA-dependent RNA polymerase 6 [Carica papaya]
          Length = 1195

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 37/73 (50%), Positives = 50/73 (68%)
 Frame = +1

Query: 1   INKRRRNIKPFKFCKVHVQIGTLFSEHEYWVGWKAPASGVDMVVDPFDNTCRILFTEMTA 180
           +N+RRR + PFK   V ++IGTL S  E+ VGW+ P+SG++ +VDPFD TC+  F+   A
Sbjct: 120 MNQRRRTMIPFKLVDVGLEIGTLVSPGEFIVGWRGPSSGIEFLVDPFDRTCKFCFSRDMA 179

Query: 181 FSLNGKEESAVIK 219
           FS  G  E AVIK
Sbjct: 180 FSFRGSVEHAVIK 192


>ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lycopersicum]
           gi|397529811|gb|AFO53516.1| RNA-dependent RNA polymerase
           6 [Solanum lycopersicum]
          Length = 1197

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 37/73 (50%), Positives = 50/73 (68%)
 Frame = +1

Query: 1   INKRRRNIKPFKFCKVHVQIGTLFSEHEYWVGWKAPASGVDMVVDPFDNTCRILFTEMTA 180
           +N+RRR   P+KF  V V+IG L S  ++ VGW+ P SGV+ +VDPF+  C+ILFT  TA
Sbjct: 119 MNERRRTFMPYKFSDVGVEIGVLVSNDDFVVGWRGPHSGVNFLVDPFNGKCKILFTRDTA 178

Query: 181 FSLNGKEESAVIK 219
           F   G+ + AVIK
Sbjct: 179 FCFKGEGKHAVIK 191


>ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X3 [Citrus
           sinensis]
          Length = 1025

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 38/73 (52%), Positives = 47/73 (64%)
 Frame = +1

Query: 1   INKRRRNIKPFKFCKVHVQIGTLFSEHEYWVGWKAPASGVDMVVDPFDNTCRILFTEMTA 180
           +N+R R   PFK   V V+IGTL S  E++V W+ PASG D +VDPFD TC+  FT   A
Sbjct: 120 LNQRGRTSTPFKLPDVCVEIGTLVSRDEFFVAWRGPASGTDFLVDPFDGTCKFCFTRDIA 179

Query: 181 FSLNGKEESAVIK 219
           F+L    E AVIK
Sbjct: 180 FALKSSTEHAVIK 192


>ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus
           sinensis] gi|568859664|ref|XP_006483357.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X2 [Citrus
           sinensis]
          Length = 1197

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 38/73 (52%), Positives = 47/73 (64%)
 Frame = +1

Query: 1   INKRRRNIKPFKFCKVHVQIGTLFSEHEYWVGWKAPASGVDMVVDPFDNTCRILFTEMTA 180
           +N+R R   PFK   V V+IGTL S  E++V W+ PASG D +VDPFD TC+  FT   A
Sbjct: 120 LNQRGRTSTPFKLPDVCVEIGTLVSRDEFFVAWRGPASGTDFLVDPFDGTCKFCFTRDIA 179

Query: 181 FSLNGKEESAVIK 219
           F+L    E AVIK
Sbjct: 180 FALKSSTEHAVIK 192


>ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
           max] gi|571459266|ref|XP_006581359.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
           max]
          Length = 1204

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 38/73 (52%), Positives = 47/73 (64%)
 Frame = +1

Query: 1   INKRRRNIKPFKFCKVHVQIGTLFSEHEYWVGWKAPASGVDMVVDPFDNTCRILFTEMTA 180
           +N+RRR   PFK   V V+IGTL S  E++V W+ P  GV  +VDPFD  CR  F+  TA
Sbjct: 120 LNQRRRTTTPFKMSDVLVEIGTLVSPGEFFVSWRGPDKGVKFLVDPFDGMCRFCFSRDTA 179

Query: 181 FSLNGKEESAVIK 219
           FS  G E+ AVIK
Sbjct: 180 FSFKGIEKKAVIK 192


>gb|AGU69384.1| RNA-dependendent RNA polymerase 6-like protein [Lotus japonicus]
          Length = 1201

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 37/73 (50%), Positives = 49/73 (67%)
 Frame = +1

Query: 1   INKRRRNIKPFKFCKVHVQIGTLFSEHEYWVGWKAPASGVDMVVDPFDNTCRILFTEMTA 180
           +N+RRR   PFK   V V+IGTL S  E+ V W+ P  GV+++VDPFD  CR+ F+  TA
Sbjct: 120 LNQRRRKETPFKLSDVLVEIGTLVSPEEFVVAWRGPEKGVNLLVDPFDRMCRLRFSRDTA 179

Query: 181 FSLNGKEESAVIK 219
           FS+   E+ AVIK
Sbjct: 180 FSIKQNEKKAVIK 192