BLASTX nr result
ID: Cocculus23_contig00031128
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cocculus23_contig00031128 (642 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containi... 225 8e-57 emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera] 223 4e-56 ref|XP_007216136.1| hypothetical protein PRUPE_ppa019108mg, part... 223 5e-56 ref|XP_004306008.1| PREDICTED: pentatricopeptide repeat-containi... 220 3e-55 gb|EXB62282.1| hypothetical protein L484_022170 [Morus notabilis] 213 3e-53 ref|XP_007043513.1| Pentatricopeptide repeat (PPR-like) superfam... 211 1e-52 ref|XP_006491628.1| PREDICTED: pentatricopeptide repeat-containi... 208 1e-51 ref|XP_006447316.1| hypothetical protein CICLE_v10014508mg [Citr... 208 1e-51 ref|XP_002319916.2| pentatricopeptide repeat-containing family p... 208 1e-51 ref|XP_002517972.1| pentatricopeptide repeat-containing protein,... 204 2e-50 ref|XP_006366001.1| PREDICTED: pentatricopeptide repeat-containi... 202 7e-50 ref|XP_006404782.1| hypothetical protein EUTSA_v10000094mg [Eutr... 198 1e-48 ref|XP_004248468.1| PREDICTED: pentatricopeptide repeat-containi... 198 1e-48 ref|XP_006305995.1| hypothetical protein CARUB_v10011274mg [Caps... 191 2e-46 ref|XP_002889462.1| pentatricopeptide repeat-containing protein ... 189 6e-46 ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containi... 189 8e-46 ref|NP_171853.1| pentatricopeptide repeat-containing protein [Ar... 183 4e-44 ref|XP_004488287.1| PREDICTED: pentatricopeptide repeat-containi... 182 8e-44 ref|XP_003595526.1| Pentatricopeptide repeat-containing protein ... 164 2e-38 ref|XP_003535018.1| PREDICTED: pentatricopeptide repeat-containi... 160 2e-37 >ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540-like [Vitis vinifera] Length = 633 Score = 225 bits (574), Expect = 8e-57 Identities = 118/184 (64%), Positives = 141/184 (76%) Frame = +1 Query: 73 HPLMRLFSKCHYSSISLPSSILQETQQNPSRESKILHLCKSGSLSQALQLLNFTGSQKLS 252 H + LF + Y S+ P ++ T NP SKIL LCKSG LS ALQLL ++S Sbjct: 3 HLMKPLFKR--YYSLLTPLNLSDNT--NPF--SKILQLCKSGELSGALQLLKSIDPGEIS 56 Query: 253 VKPVIFASLLQTCIKALSFTHGLQIHSYVIKSGLELDRYVGNSLLSMYFKLGPDFSDTQK 432 KPV++ASLLQTC K L+F HGLQIH++VIKSGLE DR+VGNSLL++YFKLG DF +T+K Sbjct: 57 AKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRK 116 Query: 433 VFDNLFEKDVISWTSMISGCIRAGKPKESLEIFWEMLGHDVEPNAFTLSAVIKACSEIGA 612 VFD LF KDVISWTSMISG +R GKP SLE+FW+ML + VEPNAFTLSAVIKACSE+G Sbjct: 117 VFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGD 176 Query: 613 LRLG 624 L+LG Sbjct: 177 LKLG 180 Score = 69.3 bits (168), Expect = 9e-10 Identities = 40/146 (27%), Positives = 77/146 (52%) Frame = +1 Query: 187 CKSGSLSQALQLLNFTGSQKLSVKPVIFASLLQTCIKALSFTHGLQIHSYVIKSGLELDR 366 C++G +Q+ F +K+ + F ++L+TC + G ++H I+ G D Sbjct: 340 CQNGDFKSVIQI--FRKMEKVDL--YCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDV 395 Query: 367 YVGNSLLSMYFKLGPDFSDTQKVFDNLFEKDVISWTSMISGCIRAGKPKESLEIFWEMLG 546 V ++L+ +Y K G Q +FD + +++I+W SMI G + G+ +E+L IF +M+ Sbjct: 396 IVESALVDLYAKCGC-IEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVK 454 Query: 547 HDVEPNAFTLSAVIKACSEIGALRLG 624 ++P+ + ++ ACS G + G Sbjct: 455 EGIKPDYISFIGILFACSHRGLVDEG 480 Score = 60.8 bits (146), Expect = 3e-07 Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 3/127 (2%) Frame = +1 Query: 253 VKPVIF--ASLLQTCIKALSFTHGLQIHSYVIKSGLELDRYVGNSLLSMYFKLGPDFSDT 426 V+P F +++++ C + G H V+ G + + + ++L+ M+ + D Sbjct: 157 VEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGR-NCALDDA 215 Query: 427 QKVFDNLFEKDVISWTSMISGCIRAGKPKESLEIFWEM-LGHDVEPNAFTLSAVIKACSE 603 +++FD L E D I WTS+IS R E+L F+ M H + P+ FT V+ AC Sbjct: 216 RQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGN 275 Query: 604 IGALRLG 624 +G L+ G Sbjct: 276 LGRLKQG 282 Score = 56.2 bits (134), Expect = 8e-06 Identities = 32/119 (26%), Positives = 64/119 (53%) Frame = +1 Query: 268 FASLLQTCIKALSFTHGLQIHSYVIKSGLELDRYVGNSLLSMYFKLGPDFSDTQKVFDNL 447 F ++L C G ++H+ VI +G + V +SL+ MY K G ++Q++FD + Sbjct: 266 FGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCG-SVGESQRIFDRM 324 Query: 448 FEKDVISWTSMISGCIRAGKPKESLEIFWEMLGHDVEPNAFTLSAVIKACSEIGALRLG 624 K+ +SW++++ G + G K ++IF +M D+ + +++ C+ + A+R G Sbjct: 325 PIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVDL----YCFGTILRTCAGLAAVRQG 379 >emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera] Length = 708 Score = 223 bits (568), Expect = 4e-56 Identities = 110/157 (70%), Positives = 129/157 (82%) Frame = +1 Query: 154 NPSRESKILHLCKSGSLSQALQLLNFTGSQKLSVKPVIFASLLQTCIKALSFTHGLQIHS 333 N + SKIL LCKSG LS ALQLL ++S KPV++ASLLQTC K L+F HGLQIH+ Sbjct: 83 NTNPFSKILQLCKSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHA 142 Query: 334 YVIKSGLELDRYVGNSLLSMYFKLGPDFSDTQKVFDNLFEKDVISWTSMISGCIRAGKPK 513 +VIKSGLE DR+VGNSLL++YFKLG DF +T+KVFD LF KDVISWTSMISG +R GKP Sbjct: 143 HVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPM 202 Query: 514 ESLEIFWEMLGHDVEPNAFTLSAVIKACSEIGALRLG 624 SLE+FW+ML + VEPNAFTLSAVIKACSE+G L+LG Sbjct: 203 NSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLG 239 Score = 69.3 bits (168), Expect = 9e-10 Identities = 40/146 (27%), Positives = 77/146 (52%) Frame = +1 Query: 187 CKSGSLSQALQLLNFTGSQKLSVKPVIFASLLQTCIKALSFTHGLQIHSYVIKSGLELDR 366 C++G +Q+ F +K+ + F ++L+TC + G ++H I+ G D Sbjct: 399 CQNGDFKSVIQI--FRKMEKVDL--YCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDV 454 Query: 367 YVGNSLLSMYFKLGPDFSDTQKVFDNLFEKDVISWTSMISGCIRAGKPKESLEIFWEMLG 546 V ++L+ +Y K G Q +FD + +++I+W SMI G + G+ +E+L IF +M+ Sbjct: 455 IVESALVDLYAKCGC-IEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVK 513 Query: 547 HDVEPNAFTLSAVIKACSEIGALRLG 624 ++P+ + ++ ACS G + G Sbjct: 514 EGIKPDYISFIGILFACSHRGLVDEG 539 Score = 60.8 bits (146), Expect = 3e-07 Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 3/127 (2%) Frame = +1 Query: 253 VKPVIF--ASLLQTCIKALSFTHGLQIHSYVIKSGLELDRYVGNSLLSMYFKLGPDFSDT 426 V+P F +++++ C + G H V+ G + + + ++L+ M+ + D Sbjct: 216 VEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGR-NCALDDA 274 Query: 427 QKVFDNLFEKDVISWTSMISGCIRAGKPKESLEIFWEM-LGHDVEPNAFTLSAVIKACSE 603 +++FD L E D I WTS+IS R E+L F+ M H + P+ FT V+ AC Sbjct: 275 RQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGN 334 Query: 604 IGALRLG 624 +G L+ G Sbjct: 335 LGRLKQG 341 Score = 56.2 bits (134), Expect = 8e-06 Identities = 32/119 (26%), Positives = 64/119 (53%) Frame = +1 Query: 268 FASLLQTCIKALSFTHGLQIHSYVIKSGLELDRYVGNSLLSMYFKLGPDFSDTQKVFDNL 447 F ++L C G ++H+ VI +G + V +SL+ MY K G ++Q++FD + Sbjct: 325 FGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCG-SVGESQRIFDRM 383 Query: 448 FEKDVISWTSMISGCIRAGKPKESLEIFWEMLGHDVEPNAFTLSAVIKACSEIGALRLG 624 K+ +SW++++ G + G K ++IF +M D+ + +++ C+ + A+R G Sbjct: 384 PIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVDL----YCFGTILRTCAGLAAVRQG 438 >ref|XP_007216136.1| hypothetical protein PRUPE_ppa019108mg, partial [Prunus persica] gi|462412286|gb|EMJ17335.1| hypothetical protein PRUPE_ppa019108mg, partial [Prunus persica] Length = 608 Score = 223 bits (567), Expect = 5e-56 Identities = 111/182 (60%), Positives = 147/182 (80%) Frame = +1 Query: 82 MRLFSKCHYSSISLPSSILQETQQNPSRESKILHLCKSGSLSQALQLLNFTGSQKLSVKP 261 M+L K H SS++ S LQ T+ ++S+IL LCK G LS A+++LN S ++++KP Sbjct: 1 MKLVLKRHCSSLT--SLNLQSTKIPSPKQSQILRLCKLGLLSDAIRVLNSIDSGEITLKP 58 Query: 262 VIFASLLQTCIKALSFTHGLQIHSYVIKSGLELDRYVGNSLLSMYFKLGPDFSDTQKVFD 441 +++ASLLQTC KA+SF HGLQIH++V+KSGLE DR+VGNSLLS+YFKL P+ S+T++VFD Sbjct: 59 ILYASLLQTCTKAVSFNHGLQIHAHVVKSGLETDRFVGNSLLSLYFKLVPNMSETRRVFD 118 Query: 442 NLFEKDVISWTSMISGCIRAGKPKESLEIFWEMLGHDVEPNAFTLSAVIKACSEIGALRL 621 LF KDVISWTSMI+G +RAGKP S+E+F++ML +EPNAFTLSAV+KACSEIG LRL Sbjct: 119 GLFVKDVISWTSMITGYVRAGKPGNSIEVFYDMLKFGIEPNAFTLSAVVKACSEIGDLRL 178 Query: 622 GI 627 G+ Sbjct: 179 GL 180 Score = 63.9 bits (154), Expect = 4e-08 Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 5/157 (3%) Frame = +1 Query: 169 SKILHLCKSGSLSQALQLLNFTGSQKLSVKPVIF--ASLLQTCIKALSFTHGLQIHSYVI 342 S I ++G ++++ F K ++P F +++++ C + GL H V+ Sbjct: 130 SMITGYVRAGKPGNSIEV--FYDMLKFGIEPNAFTLSAVVKACSEIGDLRLGLCFHGVVV 187 Query: 343 KSGLELDRYVGNSLLSMYFKLGPDF--SDTQKVFDNLFEKDVISWTSMISGCIRAGKPKE 516 + G + + ++L++MY G ++ D + +FD L E I WTS+IS R+ +E Sbjct: 188 RRGFVSNHVIISALINMY---GRNYRSEDARLLFDELTEPGAICWTSIISALTRSDLFEE 244 Query: 517 SLEIFWEM-LGHDVEPNAFTLSAVIKACSEIGALRLG 624 +L F+ M H + P+ FT V+ AC +G LR G Sbjct: 245 ALGFFYLMHRYHGLSPDGFTFGTVLAACGNLGRLRQG 281 Score = 56.2 bits (134), Expect = 8e-06 Identities = 35/120 (29%), Positives = 63/120 (52%), Gaps = 1/120 (0%) Frame = +1 Query: 268 FASLLQTCIKALSFTHGLQIHSYVIKSGLELDRYVGNSLLSMYFKLGP-DFSDTQKVFDN 444 F ++L+ C + G ++H ++ D V ++L+ +Y K G DF+ ++VF Sbjct: 362 FGTVLRACAGLAAVQQGKEVHCQYVRRCGWRDVIVESALVHLYAKCGCIDFA--RRVFTQ 419 Query: 445 LFEKDVISWTSMISGCIRAGKPKESLEIFWEMLGHDVEPNAFTLSAVIKACSEIGALRLG 624 + +++I+W SMI G + G E+L IF M+ V+P+ + V+ ACS G + G Sbjct: 420 MPVRNLITWNSMICGFAQNGGGAEALRIFDRMIKEGVKPDYISFIGVLFACSHAGLVDQG 479 >ref|XP_004306008.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540-like [Fragaria vesca subsp. vesca] Length = 658 Score = 220 bits (560), Expect = 3e-55 Identities = 110/178 (61%), Positives = 143/178 (80%) Frame = +1 Query: 91 FSKCHYSSISLPSSILQETQQNPSRESKILHLCKSGSLSQALQLLNFTGSQKLSVKPVIF 270 F K +Y+S+ LPS+ L + Q P ++S+IL LCKSG L A+ LLN T KL++KP+++ Sbjct: 6 FFKRYYTSL-LPSN-LPKPQNPPPKQSQILRLCKSGLLLDAIHLLNSTNPSKLTLKPLLY 63 Query: 271 ASLLQTCIKALSFTHGLQIHSYVIKSGLELDRYVGNSLLSMYFKLGPDFSDTQKVFDNLF 450 ASLLQTC KA+S THGLQIHS+VIK+GLE DR+VGNSLLS+YFKL P+ + TQKVFD L+ Sbjct: 64 ASLLQTCTKAVSLTHGLQIHSHVIKTGLETDRFVGNSLLSLYFKLIPNMTQTQKVFDALY 123 Query: 451 EKDVISWTSMISGCIRAGKPKESLEIFWEMLGHDVEPNAFTLSAVIKACSEIGALRLG 624 KDVISWTSMI+G +RAGKP S+E+FWEM+ +EPN FT+SAV+KACS++G + LG Sbjct: 124 FKDVISWTSMITGYVRAGKPATSVELFWEMVRFGIEPNDFTVSAVVKACSQLGRVSLG 181 Score = 64.7 bits (156), Expect = 2e-08 Identities = 40/147 (27%), Positives = 79/147 (53%), Gaps = 1/147 (0%) Frame = +1 Query: 187 CKSGSLSQALQLLNFTGSQKLSVKPVIFASLLQTCIKALSFTHGLQIHSYVIKSGLELDR 366 C++G ++ NF ++ + F ++L+ C + HG ++H ++ D Sbjct: 341 CQAGEFESVIK--NFREMEEADL--YCFGTVLRACAGLAAVQHGKEVHCQYVRRCGWRDV 396 Query: 367 YVGNSLLSMYFKLGP-DFSDTQKVFDNLFEKDVISWTSMISGCIRAGKPKESLEIFWEML 543 V ++L+++Y K G DF+ + VF + +++I+W SMI G + G+ +E+L+IF EM+ Sbjct: 397 IVESALVNLYAKCGCIDFASS--VFAQMLVRNLITWNSMICGFAQNGQGEEALKIFDEMI 454 Query: 544 GHDVEPNAFTLSAVIKACSEIGALRLG 624 ++P+ + V+ ACS G + G Sbjct: 455 KEGMKPDYISFIGVLFACSHAGLVDQG 481 Score = 57.0 bits (136), Expect = 5e-06 Identities = 32/119 (26%), Positives = 66/119 (55%) Frame = +1 Query: 268 FASLLQTCIKALSFTHGLQIHSYVIKSGLELDRYVGNSLLSMYFKLGPDFSDTQKVFDNL 447 F ++L C G ++H+ V+ G++ + V +SL+ MY K G D+++VFD + Sbjct: 267 FGTVLTACGNLERLRQGREVHAKVVTYGIKGNVVVESSLVDMYGKCG-SVDDSRRVFDRM 325 Query: 448 FEKDVISWTSMISGCIRAGKPKESLEIFWEMLGHDVEPNAFTLSAVIKACSEIGALRLG 624 K+ +SW++++ +AG+ + ++ F EM E + + V++AC+ + A++ G Sbjct: 326 AVKNSVSWSALLGVYCQAGEFESVIKNFREM----EEADLYCFGTVLRACAGLAAVQHG 380 >gb|EXB62282.1| hypothetical protein L484_022170 [Morus notabilis] Length = 633 Score = 213 bits (543), Expect = 3e-53 Identities = 109/181 (60%), Positives = 137/181 (75%) Frame = +1 Query: 82 MRLFSKCHYSSISLPSSILQETQQNPSRESKILHLCKSGSLSQALQLLNFTGSQKLSVKP 261 M+LF K H+ S SL SS L T+ +ES+I LCK G+LS A +LN +++VKP Sbjct: 1 MKLFFKRHHCS-SLSSSNLHNTKNQSHKESQIRQLCKFGALSDAFSVLNSIDPGEITVKP 59 Query: 262 VIFASLLQTCIKALSFTHGLQIHSYVIKSGLELDRYVGNSLLSMYFKLGPDFSDTQKVFD 441 ++ASLLQTC+KA+SF GLQIH++V+KSGLE DR+VGNSLL++YFKLG D S T++VFD Sbjct: 60 TLYASLLQTCVKAVSFKPGLQIHAHVVKSGLETDRFVGNSLLALYFKLGSDISQTRRVFD 119 Query: 442 NLFEKDVISWTSMISGCIRAGKPKESLEIFWEMLGHDVEPNAFTLSAVIKACSEIGALRL 621 NL KDVISWTSM+SG ++ GKP+ + +F EM G VEPN FTLSAVIKACSEI LRL Sbjct: 120 NLNFKDVISWTSMVSGYVKVGKPENGISLFREMYGFGVEPNGFTLSAVIKACSEIPDLRL 179 Query: 622 G 624 G Sbjct: 180 G 180 Score = 62.8 bits (151), Expect = 9e-08 Identities = 34/146 (23%), Positives = 73/146 (50%) Frame = +1 Query: 187 CKSGSLSQALQLLNFTGSQKLSVKPVIFASLLQTCIKALSFTHGLQIHSYVIKSGLELDR 366 C++G ++L L F ++++ C + HG ++H ++ G + Sbjct: 340 CQNGEFGYVIELFREMEKDDL----YCFGTVIRACAGLAAARHGKEVHCQYVRKGSSRNV 395 Query: 367 YVGNSLLSMYFKLGPDFSDTQKVFDNLFEKDVISWTSMISGCIRAGKPKESLEIFWEMLG 546 V ++L+ +Y K G + ++VF + +++I+W SMI G + G+ E++ +F +M+ Sbjct: 396 IVESALVDLYAKCGC-INFAERVFCRMPVRNLITWNSMICGFAQNGRGGEAIGVFDQMIK 454 Query: 547 HDVEPNAFTLSAVIKACSEIGALRLG 624 ++P+ + V+ ACS G + G Sbjct: 455 EGIKPDYISFVGVLFACSHSGLVERG 480 Score = 56.6 bits (135), Expect = 6e-06 Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 1/119 (0%) Frame = +1 Query: 271 ASLLQTCIKALSFTHGLQIHSYVIKSGLELDRYVGNSLLSMYFKLGPDFSDTQKVFDNLF 450 +++++ C + G H+ V+K G + + + +SL+ MY + D K+FD + Sbjct: 165 SAVIKACSEIPDLRLGRCFHTMVVKCGFDSNHVIVSSLIDMYGRNNVP-EDACKLFDEMI 223 Query: 451 EKDVISWTSMISGCIRAGKPKESLEIFWEMLGH-DVEPNAFTLSAVIKACSEIGALRLG 624 + D I WTS+IS R ++L +F+ M + +T V+ AC +G LR G Sbjct: 224 DPDAICWTSVISAMTRNDSFVKALGLFYSMQRKAGFFADGYTFGTVLTACGNLGRLRQG 282 >ref|XP_007043513.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma cacao] gi|508707448|gb|EOX99344.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma cacao] Length = 638 Score = 211 bits (538), Expect = 1e-52 Identities = 102/157 (64%), Positives = 125/157 (79%), Gaps = 3/157 (1%) Frame = +1 Query: 163 RESKILHLCKSGSLSQALQLLN---FTGSQKLSVKPVIFASLLQTCIKALSFTHGLQIHS 333 + S+ILH CKS L A+ LLN F S KP+++ASLLQTC SF+HGLQ H+ Sbjct: 30 KHSQILHFCKSAQLFPAIHLLNTLHFPSETTSSKKPLLYASLLQTCTNVQSFSHGLQFHA 89 Query: 334 YVIKSGLELDRYVGNSLLSMYFKLGPDFSDTQKVFDNLFEKDVISWTSMISGCIRAGKPK 513 +VIKSGL+ DR+VGNSLL++YFKLGPDF++T++VFD LF KDVISWTSM+SG I+AGKP+ Sbjct: 90 HVIKSGLQTDRFVGNSLLALYFKLGPDFTETRRVFDGLFVKDVISWTSMVSGYIKAGKPE 149 Query: 514 ESLEIFWEMLGHDVEPNAFTLSAVIKACSEIGALRLG 624 SL++FWEMLG VEPN FTLS VIKACSE+G LRLG Sbjct: 150 SSLQLFWEMLGFGVEPNGFTLSTVIKACSELGKLRLG 186 Score = 67.8 bits (164), Expect = 3e-09 Identities = 51/150 (34%), Positives = 73/150 (48%), Gaps = 5/150 (3%) Frame = +1 Query: 190 KSGSLSQALQLLNFTGSQKLSVKPVIFASLLQTCIKALSFTHGLQI----HSYVIKSGLE 357 K+G +LQL F V+P F L T IKA S L++ H VIK G Sbjct: 144 KAGKPESSLQL--FWEMLGFGVEPNGFT--LSTVIKACSELGKLRLGWCFHGVVIKRGFV 199 Query: 358 LDRYVGNSLLSMYFKLGPDFSDTQKVFDNLFEKDVISWTSMISGCIRAGKPKESLEIFWE 537 +R + ++L+ Y + + ++FD L E D I WTS+IS R +E+L F+ Sbjct: 200 SNRVISSALIDFYGR-NWQLKEACEIFDELPEPDAICWTSVISALTRNDLYEEALRFFYL 258 Query: 538 M-LGHDVEPNAFTLSAVIKACSEIGALRLG 624 M H + P+ FT V+ AC +G LR G Sbjct: 259 MHRNHGLSPDGFTFGTVLTACGNLGRLRQG 288 >ref|XP_006491628.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540-like [Citrus sinensis] Length = 612 Score = 208 bits (529), Expect = 1e-51 Identities = 115/183 (62%), Positives = 137/183 (74%), Gaps = 2/183 (1%) Frame = +1 Query: 82 MRLFSKCHYSSISLPSSILQETQQNPSRE-SKILHLCKSGSLSQALQLLNFTG-SQKLSV 255 M+LF K H SS++ +T QN S E ++IL+ CKSG+L A+ LLN T S Sbjct: 1 MKLFFKRHCSSLTT-----LKTLQNSSTEVAQILNYCKSGALCDAICLLNSTDLSTAFIK 55 Query: 256 KPVIFASLLQTCIKALSFTHGLQIHSYVIKSGLELDRYVGNSLLSMYFKLGPDFSDTQKV 435 KPV++ASLLQTCIK SF+ GLQIHS+VIKSGLE D ++GNSLLS Y KLGPDF +TQKV Sbjct: 56 KPVVYASLLQTCIKVFSFSQGLQIHSHVIKSGLENDPFIGNSLLSTYIKLGPDFDETQKV 115 Query: 436 FDNLFEKDVISWTSMISGCIRAGKPKESLEIFWEMLGHDVEPNAFTLSAVIKACSEIGAL 615 F+ F KDVISWTSMISG I+ GK K +LE+F EM G DVEPN FTLSAVIKACSE+G + Sbjct: 116 FNGHFIKDVISWTSMISGYIKIGKSKNALELFCEMSGLDVEPNGFTLSAVIKACSELGFI 175 Query: 616 RLG 624 RLG Sbjct: 176 RLG 178 Score = 60.5 bits (145), Expect = 4e-07 Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 3/155 (1%) Frame = +1 Query: 169 SKILHLCKSGSLSQALQLLNFTGSQKLSVKPVIF--ASLLQTCIKALSFTHGLQIHSYVI 342 S I K G AL+L F L V+P F +++++ C + G H VI Sbjct: 129 SMISGYIKIGKSKNALEL--FCEMSGLDVEPNGFTLSAVIKACSELGFIRLGKCFHGMVI 186 Query: 343 KSGLELDRYVGNSLLSMYFKLGPDFSDTQKVFDNLFEKDVISWTSMISGCIRAGKPKESL 522 K G + +SL+ +Y + + D +++FD L E D I WTS+IS ++ ++L Sbjct: 187 KRGFISSHVISSSLIDLYGR-NCESEDGRQLFDELPEPDAICWTSVISAFTKSDLYAKAL 245 Query: 523 EIFWEM-LGHDVEPNAFTLSAVIKACSEIGALRLG 624 F+ M H + + FT V+ AC +G L+ G Sbjct: 246 GFFYLMQREHGLVADGFTFGTVLTACGNLGRLKQG 280 Score = 58.9 bits (141), Expect = 1e-06 Identities = 37/119 (31%), Positives = 65/119 (54%) Frame = +1 Query: 268 FASLLQTCIKALSFTHGLQIHSYVIKSGLELDRYVGNSLLSMYFKLGPDFSDTQKVFDNL 447 F ++L C G ++H+ VI GL + V +SL+ MY K G ++ +VFD + Sbjct: 264 FGTVLTACGNLGRLKQGKEVHAKVITLGLCGNVVVESSLVDMYGKCGL-VDESHRVFDKM 322 Query: 448 FEKDVISWTSMISGCIRAGKPKESLEIFWEMLGHDVEPNAFTLSAVIKACSEIGALRLG 624 +K+ +S ++++ G + G + + IF EM E + F+ V++AC+ + ALRLG Sbjct: 323 LKKNSVSSSALLQGYCQTGDFESVIRIFREM----EEIDLFSFGIVLRACAGLAALRLG 377 Score = 58.5 bits (140), Expect = 2e-06 Identities = 38/148 (25%), Positives = 77/148 (52%), Gaps = 2/148 (1%) Frame = +1 Query: 187 CKSGSLSQALQLLNFTGSQKLSVKPVIFASLLQTCIKALSFTHGLQIH-SYVIKSGLELD 363 C++G +++ + + F +L+ C + G ++H Y+ +SG + D Sbjct: 338 CQTGDFESVIRIFR----EMEEIDLFSFGIVLRACAGLAALRLGKEVHCQYIRRSGCK-D 392 Query: 364 RYVGNSLLSMYFKLG-PDFSDTQKVFDNLFEKDVISWTSMISGCIRAGKPKESLEIFWEM 540 + ++L+ +Y K G DF+ ++F + +++I+W SMISG + G+ +E+L IF +M Sbjct: 393 VIIESALVDLYAKCGCVDFA--HQIFLQMPVRNLITWNSMISGFAQNGRGEEALRIFDDM 450 Query: 541 LGHDVEPNAFTLSAVIKACSEIGALRLG 624 +P+ + V+ ACS +G + G Sbjct: 451 TEGGTKPDHVSFIGVLSACSHMGLIDRG 478 >ref|XP_006447316.1| hypothetical protein CICLE_v10014508mg [Citrus clementina] gi|557549927|gb|ESR60556.1| hypothetical protein CICLE_v10014508mg [Citrus clementina] Length = 668 Score = 208 bits (529), Expect = 1e-51 Identities = 115/183 (62%), Positives = 137/183 (74%), Gaps = 2/183 (1%) Frame = +1 Query: 82 MRLFSKCHYSSISLPSSILQETQQNPSRE-SKILHLCKSGSLSQALQLLNFTG-SQKLSV 255 M+LF K H SS++ +T QN S E ++IL+ CKSG+L A+ LLN T S Sbjct: 1 MKLFFKRHCSSLTT-----LKTLQNSSTEVAQILNYCKSGALCDAICLLNSTDLSTAFIK 55 Query: 256 KPVIFASLLQTCIKALSFTHGLQIHSYVIKSGLELDRYVGNSLLSMYFKLGPDFSDTQKV 435 KPV++ASLLQTCIK SF+ GLQIHS+VIKSGLE D ++GNSLLS Y KLGPDF +TQKV Sbjct: 56 KPVVYASLLQTCIKVFSFSQGLQIHSHVIKSGLENDPFIGNSLLSTYIKLGPDFDETQKV 115 Query: 436 FDNLFEKDVISWTSMISGCIRAGKPKESLEIFWEMLGHDVEPNAFTLSAVIKACSEIGAL 615 F+ F KDVISWTSMISG I+ GK K +LE+F EM G DVEPN FTLSAVIKACSE+G + Sbjct: 116 FNGHFIKDVISWTSMISGYIKIGKSKNALELFCEMSGLDVEPNGFTLSAVIKACSELGFI 175 Query: 616 RLG 624 RLG Sbjct: 176 RLG 178 Score = 60.5 bits (145), Expect = 4e-07 Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 3/155 (1%) Frame = +1 Query: 169 SKILHLCKSGSLSQALQLLNFTGSQKLSVKPVIF--ASLLQTCIKALSFTHGLQIHSYVI 342 S I K G AL+L F L V+P F +++++ C + G H VI Sbjct: 129 SMISGYIKIGKSKNALEL--FCEMSGLDVEPNGFTLSAVIKACSELGFIRLGKCFHGMVI 186 Query: 343 KSGLELDRYVGNSLLSMYFKLGPDFSDTQKVFDNLFEKDVISWTSMISGCIRAGKPKESL 522 K G + +SL+ +Y + + D +++FD L E D I WTS+IS ++ ++L Sbjct: 187 KRGFISSHVISSSLIDLYGR-NCESEDGRQLFDELPEPDAICWTSVISAFTKSDLYAKAL 245 Query: 523 EIFWEM-LGHDVEPNAFTLSAVIKACSEIGALRLG 624 F+ M H + + FT V+ AC +G L+ G Sbjct: 246 GFFYLMQREHGLVADGFTFGTVLTACGNLGRLKQG 280 Score = 58.9 bits (141), Expect = 1e-06 Identities = 37/119 (31%), Positives = 65/119 (54%) Frame = +1 Query: 268 FASLLQTCIKALSFTHGLQIHSYVIKSGLELDRYVGNSLLSMYFKLGPDFSDTQKVFDNL 447 F ++L C G ++H+ VI GL + V +SL+ MY K G ++ +VFD + Sbjct: 264 FGTVLTACGNLGRLKQGKEVHAKVITLGLCGNVVVESSLVDMYGKCGL-VDESHRVFDKM 322 Query: 448 FEKDVISWTSMISGCIRAGKPKESLEIFWEMLGHDVEPNAFTLSAVIKACSEIGALRLG 624 +K+ +S ++++ G + G + + IF EM E + F+ V++AC+ + ALRLG Sbjct: 323 LKKNSVSSSALLQGYCQTGDFESVIRIFREM----EEIDLFSFGIVLRACAGLAALRLG 377 Score = 58.5 bits (140), Expect = 2e-06 Identities = 38/148 (25%), Positives = 77/148 (52%), Gaps = 2/148 (1%) Frame = +1 Query: 187 CKSGSLSQALQLLNFTGSQKLSVKPVIFASLLQTCIKALSFTHGLQIH-SYVIKSGLELD 363 C++G +++ + + F +L+ C + G ++H Y+ +SG + D Sbjct: 338 CQTGDFESVIRIFR----EMEEIDLFSFGIVLRACAGLAALRLGKEVHCQYIRRSGCK-D 392 Query: 364 RYVGNSLLSMYFKLG-PDFSDTQKVFDNLFEKDVISWTSMISGCIRAGKPKESLEIFWEM 540 + ++L+ +Y K G DF+ ++F + +++I+W SMISG + G+ +E+L IF +M Sbjct: 393 VIIESALVDLYAKCGCVDFA--HQIFLQMPVRNLITWNSMISGFAQNGRGEEALRIFDDM 450 Query: 541 LGHDVEPNAFTLSAVIKACSEIGALRLG 624 +P+ + V+ ACS +G + G Sbjct: 451 TEGGTKPDHVSFIGVLSACSHMGLIDRG 478 >ref|XP_002319916.2| pentatricopeptide repeat-containing family protein [Populus trichocarpa] gi|550325822|gb|EEE95839.2| pentatricopeptide repeat-containing family protein [Populus trichocarpa] Length = 606 Score = 208 bits (529), Expect = 1e-51 Identities = 106/180 (58%), Positives = 139/180 (77%), Gaps = 1/180 (0%) Frame = +1 Query: 88 LFSKCHYSSISLPSSILQETQQNP-SRESKILHLCKSGSLSQALQLLNFTGSQKLSVKPV 264 L S+ HYS+++ S+ +T +NP S+ KI+ CKSGSL +A+ +LN +LS KP Sbjct: 5 LSSQRHYSTLA---SLNLKTLENPQSKAYKIIQYCKSGSLFEAIHVLNSIDWTRLSNKPF 61 Query: 265 IFASLLQTCIKALSFTHGLQIHSYVIKSGLELDRYVGNSLLSMYFKLGPDFSDTQKVFDN 444 +ASLLQTC KA+SFTHG+Q HS+ IKSGL+ DR+VGNSLL++YFKLGP+ + ++VFD Sbjct: 62 FYASLLQTCTKAVSFTHGIQFHSHAIKSGLDTDRFVGNSLLALYFKLGPNLFEARRVFDG 121 Query: 445 LFEKDVISWTSMISGCIRAGKPKESLEIFWEMLGHDVEPNAFTLSAVIKACSEIGALRLG 624 LF KD+ISWTSMI+G ++ KPK+SLE+F EMLG +EPN FTLSAVIKACS +G LRLG Sbjct: 122 LFYKDLISWTSMITGYVKVEKPKKSLELFLEMLGLGIEPNGFTLSAVIKACSGLGDLRLG 181 Score = 60.1 bits (144), Expect = 6e-07 Identities = 39/126 (30%), Positives = 68/126 (53%) Frame = +1 Query: 247 LSVKPVIFASLLQTCIKALSFTHGLQIHSYVIKSGLELDRYVGNSLLSMYFKLGPDFSDT 426 LS F ++L C G ++H+ VI SGL + +V +SL+ MY K + + Sbjct: 260 LSPDGFTFGTVLTACGNLGRLKQGKEVHAKVITSGLSGNVFVESSLVDMYGKCRL-VNQS 318 Query: 427 QKVFDNLFEKDVISWTSMISGCIRAGKPKESLEIFWEMLGHDVEPNAFTLSAVIKACSEI 606 Q VFD + K+++SWT+++ G + G + + IF E G V+ ++ V++AC+ + Sbjct: 319 QCVFDRMSVKNLVSWTALLGGYCQNGDFESVIRIFRE--GKKVD--TYSFGTVLRACAGL 374 Query: 607 GALRLG 624 A+R G Sbjct: 375 AAVRQG 380 Score = 59.7 bits (143), Expect = 7e-07 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 1/147 (0%) Frame = +1 Query: 187 CKSGSLSQALQLLNFTGSQKLSVKPVIFASLLQTCIKALSFTHGLQIHSYVIKSGLELDR 366 C++G +++ + V F ++L+ C + G ++H +K D Sbjct: 341 CQNGDFESVIRIFR----EGKKVDTYSFGTVLRACAGLAAVRQGKEVHCQYVKRCCWRDV 396 Query: 367 YVGNSLLSMYFKLGP-DFSDTQKVFDNLFEKDVISWTSMISGCIRAGKPKESLEIFWEML 543 ++L+ +Y K G DF+D ++F + +++I+W SMI G + G+ E ++F EM+ Sbjct: 397 VTESALVDLYAKCGCIDFAD--RIFVRMSVRNLITWNSMIYGFAQNGRGGEVFQLFDEMI 454 Query: 544 GHDVEPNAFTLSAVIKACSEIGALRLG 624 + P+ + V+ ACS G + G Sbjct: 455 EEGIRPDYISFVGVLFACSHAGLVDQG 481 >ref|XP_002517972.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223542954|gb|EEF44490.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 483 Score = 204 bits (519), Expect = 2e-50 Identities = 105/181 (58%), Positives = 139/181 (76%) Frame = +1 Query: 82 MRLFSKCHYSSISLPSSILQETQQNPSRESKILHLCKSGSLSQALQLLNFTGSQKLSVKP 261 M LF + H SS LPS L+ ++E KI+ CKSG+L AL +LN S+++S KP Sbjct: 1 MNLFKR-HCSS--LPSFNLK------NKEIKIIGFCKSGALLHALDILNSIDSREISNKP 51 Query: 262 VIFASLLQTCIKALSFTHGLQIHSYVIKSGLELDRYVGNSLLSMYFKLGPDFSDTQKVFD 441 I+ASLLQTC K +SF HGLQIH++V+KSGLE DR+VGNSLL++YFKL DF +T++VFD Sbjct: 52 FIYASLLQTCTKVVSFNHGLQIHAHVVKSGLETDRFVGNSLLALYFKLSTDFFETRRVFD 111 Query: 442 NLFEKDVISWTSMISGCIRAGKPKESLEIFWEMLGHDVEPNAFTLSAVIKACSEIGALRL 621 L+ +DVISWTSMI+G ++ KPK++L++FWEML V+PNAFTLSAVIKAC+++G L L Sbjct: 112 GLYFRDVISWTSMITGYVKGEKPKKALDLFWEMLDVGVDPNAFTLSAVIKACTDLGTLML 171 Query: 622 G 624 G Sbjct: 172 G 172 Score = 61.6 bits (148), Expect = 2e-07 Identities = 38/130 (29%), Positives = 70/130 (53%), Gaps = 2/130 (1%) Frame = +1 Query: 241 QKLSVKP--VIFASLLQTCIKALSFTHGLQIHSYVIKSGLELDRYVGNSLLSMYFKLGPD 414 +KL + P F ++L C G ++H+ +I SG + V +SL+ MY K G Sbjct: 247 RKLGLAPDGFTFGTVLTACGNLRRLKQGKEVHAKLITSGFSGNVVVESSLVDMYGKCGL- 305 Query: 415 FSDTQKVFDNLFEKDVISWTSMISGCIRAGKPKESLEIFWEMLGHDVEPNAFTLSAVIKA 594 ++Q+VFD + K+ +SW++++ G + G + + IF EM D + ++ V++A Sbjct: 306 VDESQRVFDRMSVKNSVSWSALLGGFCQNGDFESVIRIFREMGEAD---DLYSFGTVLRA 362 Query: 595 CSEIGALRLG 624 C+ + A+R G Sbjct: 363 CAGLAAVRQG 372 Score = 60.1 bits (144), Expect = 6e-07 Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 1/175 (0%) Frame = +1 Query: 79 LMRLFSKCHYSSISLPSSILQETQQNPSRESKILHLCKSGSLSQALQLLNFTGSQKLSVK 258 L+ ++ KC S + + S + + C++G +++ G Sbjct: 296 LVDMYGKCGLVDESQRVFDRMSVKNSVSWSALLGGFCQNGDFESVIRIFREMGEADDLYS 355 Query: 259 PVIFASLLQTCIKALSFTHGLQIHSYVIKSGLELDRYVGNSLLSMYFKLGP-DFSDTQKV 435 F ++L+ C + G ++H ++ G D + ++L+ +Y K G DF+ ++ Sbjct: 356 ---FGTVLRACAGLAAVRQGKEVHCQYVRRGGWRDVIIESALVDLYAKCGCIDFA--HRI 410 Query: 436 FDNLFEKDVISWTSMISGCIRAGKPKESLEIFWEMLGHDVEPNAFTLSAVIKACS 600 F + +++I+W SMI G + G +E+L IF EM+ +P+ T V+ ACS Sbjct: 411 FTKMTVRNLITWNSMICGFAQNGWAEEALRIFDEMVKEGTKPDYITFIGVLFACS 465 >ref|XP_006366001.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540-like [Solanum tuberosum] Length = 597 Score = 202 bits (514), Expect = 7e-50 Identities = 99/181 (54%), Positives = 140/181 (77%) Frame = +1 Query: 82 MRLFSKCHYSSISLPSSILQETQQNPSRESKILHLCKSGSLSQALQLLNFTGSQKLSVKP 261 ++LF HYSS++ ++ PS+ES+I+HLC+SG LSQA++LL T +K+S KP Sbjct: 3 LKLFVHRHYSSVTFFTN-------PPSKESEIIHLCRSGLLSQAIKLLKTT--EKISSKP 53 Query: 262 VIFASLLQTCIKALSFTHGLQIHSYVIKSGLELDRYVGNSLLSMYFKLGPDFSDTQKVFD 441 +++A+L+QTC K+ SF HG+Q H++VIK+GLE DR+VGNSLL++YFKLG F +T++ F+ Sbjct: 54 IVYATLIQTCTKSHSFNHGVQFHTHVIKTGLETDRFVGNSLLALYFKLGSKFLETRRFFE 113 Query: 442 NLFEKDVISWTSMISGCIRAGKPKESLEIFWEMLGHDVEPNAFTLSAVIKACSEIGALRL 621 + KDV++W+SMI+G +R GKPK SLE++ EM+ EPN FTLSAVIKACSEIG L+L Sbjct: 114 GMVYKDVVAWSSMITGYVRIGKPKISLELYGEMIDLGFEPNGFTLSAVIKACSEIGKLKL 173 Query: 622 G 624 G Sbjct: 174 G 174 Score = 66.2 bits (160), Expect = 8e-09 Identities = 40/146 (27%), Positives = 72/146 (49%) Frame = +1 Query: 187 CKSGSLSQALQLLNFTGSQKLSVKPVIFASLLQTCIKALSFTHGLQIHSYVIKSGLELDR 366 C+ G ++L G L F ++L+ C + G ++H ++ G D Sbjct: 334 CQKGEFDIVIELFRTMGEVDL----YSFGTVLRACAGLAALKSGKEVHCQYLRRGGWSDV 389 Query: 367 YVGNSLLSMYFKLGPDFSDTQKVFDNLFEKDVISWTSMISGCIRAGKPKESLEIFWEMLG 546 V ++L+ +Y K G D + +F + ++ ++W SMISG + GK E++ +F EM+ Sbjct: 390 IVESALVDLYAKCGFD-NYAYVIFRQMNVRNSVTWNSMISGFAQNGKGAEAIAVFEEMIS 448 Query: 547 HDVEPNAFTLSAVIKACSEIGALRLG 624 V+P+ + AV+ ACS G + G Sbjct: 449 EGVKPDYISFIAVLFACSHSGMVDEG 474 >ref|XP_006404782.1| hypothetical protein EUTSA_v10000094mg [Eutrema salsugineum] gi|557105910|gb|ESQ46235.1| hypothetical protein EUTSA_v10000094mg [Eutrema salsugineum] Length = 611 Score = 198 bits (504), Expect = 1e-48 Identities = 99/181 (54%), Positives = 132/181 (72%) Frame = +1 Query: 82 MRLFSKCHYSSISLPSSILQETQQNPSRESKILHLCKSGSLSQALQLLNFTGSQKLSVKP 261 M L K H+S S L + + +++S+IL LCKSG L A+Q+LN T S +++ KP Sbjct: 4 MTLSWKRHFSQHSSHQLALSISSSSSTKQSRILELCKSGQLMDAIQILNSTESCEIAAKP 63 Query: 262 VIFASLLQTCIKALSFTHGLQIHSYVIKSGLELDRYVGNSLLSMYFKLGPDFSDTQKVFD 441 ++ASLLQTC K SF HGLQ H +V+KSGLE DRYVGNSLLS+YFKLGPD +T++VFD Sbjct: 64 NLYASLLQTCTKVRSFIHGLQFHGHVVKSGLETDRYVGNSLLSLYFKLGPDMRETRRVFD 123 Query: 442 NLFEKDVISWTSMISGCIRAGKPKESLEIFWEMLGHDVEPNAFTLSAVIKACSEIGALRL 621 +F KD ISWTSM+SG I + + ++LE+F EM+ +EPNA+TLS+ IKACSE+G + L Sbjct: 124 GMFIKDAISWTSMMSGYIGSKEHVKALEMFMEMVTFGLEPNAYTLSSAIKACSELGEVTL 183 Query: 622 G 624 G Sbjct: 184 G 184 Score = 69.3 bits (168), Expect = 9e-10 Identities = 38/119 (31%), Positives = 69/119 (57%) Frame = +1 Query: 268 FASLLQTCIKALSFTHGLQIHSYVIKSGLELDRYVGNSLLSMYFKLGPDFSDTQKVFDNL 447 F ++L C G +IH +I SG+ + VG+SLL MY K G + + ++VF+ + Sbjct: 270 FGTVLTACGNLRRLKQGKEIHGKLITSGIGSNVVVGSSLLDMYGKCGSVW-EARQVFNRM 328 Query: 448 FEKDVISWTSMISGCIRAGKPKESLEIFWEMLGHDVEPNAFTLSAVIKACSEIGALRLG 624 +K+++SW++++ G + G+ + EIF +M E + + V+KAC+ + A+RLG Sbjct: 329 SKKNIVSWSALLGGYCQNGEHDKVCEIFRKM----EEKDLYCFGTVLKACAGLAAVRLG 383 >ref|XP_004248468.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540-like [Solanum lycopersicum] Length = 597 Score = 198 bits (504), Expect = 1e-48 Identities = 96/181 (53%), Positives = 139/181 (76%) Frame = +1 Query: 82 MRLFSKCHYSSISLPSSILQETQQNPSRESKILHLCKSGSLSQALQLLNFTGSQKLSVKP 261 ++L HYSS++ ++ PS+ES+I+HLC+S LSQA++LL T +K+S KP Sbjct: 3 LKLLGHRHYSSVTFFTN-------PPSKESEIIHLCRSDLLSQAIKLLKST--EKISSKP 53 Query: 262 VIFASLLQTCIKALSFTHGLQIHSYVIKSGLELDRYVGNSLLSMYFKLGPDFSDTQKVFD 441 +++A+L+QTC K+ SF HG+Q H++VIK+G+E DR+VGNSLL++YFKLG +F +T++ FD Sbjct: 54 IVYATLIQTCTKSHSFNHGVQFHTHVIKTGIETDRFVGNSLLALYFKLGSNFLETRRFFD 113 Query: 442 NLFEKDVISWTSMISGCIRAGKPKESLEIFWEMLGHDVEPNAFTLSAVIKACSEIGALRL 621 + KDV++W+SMI+G +R GKPK SLE++ EM+ EPN FTLSAVIKACS+IG L+L Sbjct: 114 GMVYKDVVAWSSMITGYVRIGKPKISLELYGEMIDLGFEPNGFTLSAVIKACSDIGKLKL 173 Query: 622 G 624 G Sbjct: 174 G 174 Score = 66.2 bits (160), Expect = 8e-09 Identities = 45/182 (24%), Positives = 87/182 (47%) Frame = +1 Query: 79 LMRLFSKCHYSSISLPSSILQETQQNPSRESKILHLCKSGSLSQALQLLNFTGSQKLSVK 258 L+ +++KC +S + + + S + + C+ G ++L G L Sbjct: 298 LVDMYAKCGLVDVSQRVFDGMDKRNSVSWCALMGGYCQKGEFDIVIELFRTMGEVDL--- 354 Query: 259 PVIFASLLQTCIKALSFTHGLQIHSYVIKSGLELDRYVGNSLLSMYFKLGPDFSDTQKVF 438 F ++L+ C + G ++H ++ G D V ++L+ +Y K G D + +F Sbjct: 355 -YSFGTVLRACAGLAALKSGKEVHCQYLRRGGWSDVIVESALVDLYAKCGFD-NYAYVIF 412 Query: 439 DNLFEKDVISWTSMISGCIRAGKPKESLEIFWEMLGHDVEPNAFTLSAVIKACSEIGALR 618 + ++ ++W SMISG + GK E++ +F EM+ V+P+ + AV+ ACS G + Sbjct: 413 RQMNVRNSVTWNSMISGFAQNGKGAEAIAVFKEMISEGVKPDYISFIAVLFACSHNGMVD 472 Query: 619 LG 624 G Sbjct: 473 EG 474 >ref|XP_006305995.1| hypothetical protein CARUB_v10011274mg [Capsella rubella] gi|482574706|gb|EOA38893.1| hypothetical protein CARUB_v10011274mg [Capsella rubella] Length = 608 Score = 191 bits (485), Expect = 2e-46 Identities = 91/155 (58%), Positives = 120/155 (77%) Frame = +1 Query: 160 SRESKILHLCKSGSLSQALQLLNFTGSQKLSVKPVIFASLLQTCIKALSFTHGLQIHSYV 339 S +S+IL LCKSG L+ A+++LN T S +S KP ++A+LLQTC K SFTHGLQ H++V Sbjct: 27 STQSRILELCKSGRLTDAIRILNSTESSGISAKPNLYAALLQTCTKVFSFTHGLQFHAHV 86 Query: 340 IKSGLELDRYVGNSLLSMYFKLGPDFSDTQKVFDNLFEKDVISWTSMISGCIRAGKPKES 519 +K G+E DRYVGNSLLS+YFKLGPD T++ FD +F KD ISWTSM+SG + + ++ Sbjct: 87 VKLGIEADRYVGNSLLSLYFKLGPDMRHTRRAFDGMFVKDAISWTSMMSGYVGVEEHVKA 146 Query: 520 LEIFWEMLGHDVEPNAFTLSAVIKACSEIGALRLG 624 LE+F EM+ +EPNAFTLS+ IKACSE+G +RLG Sbjct: 147 LEVFVEMVTIGLEPNAFTLSSAIKACSELGEVRLG 181 Score = 66.6 bits (161), Expect = 6e-09 Identities = 35/119 (29%), Positives = 68/119 (57%) Frame = +1 Query: 268 FASLLQTCIKALSFTHGLQIHSYVIKSGLELDRYVGNSLLSMYFKLGPDFSDTQKVFDNL 447 F ++L C G +IH +I +G+ + V +SLL MY K G + ++VF+ + Sbjct: 267 FGTVLTACGNLRRLKQGKEIHGKLITTGIGCNVVVESSLLDMYGKCG-SVREARQVFNRI 325 Query: 448 FEKDVISWTSMISGCIRAGKPKESLEIFWEMLGHDVEPNAFTLSAVIKACSEIGALRLG 624 +K+ +SW++++ + G+ ++++E+F EM E + + V+KAC+ + A+RLG Sbjct: 326 SKKNTVSWSALLGAYCQNGEHEKAIEMFMEM----EEKDLYCFGTVLKACAGLAAVRLG 380 >ref|XP_002889462.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297335304|gb|EFH65721.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 608 Score = 189 bits (480), Expect = 6e-46 Identities = 95/182 (52%), Positives = 132/182 (72%) Frame = +1 Query: 79 LMRLFSKCHYSSISLPSSILQETQQNPSRESKILHLCKSGSLSQALQLLNFTGSQKLSVK 258 L R FS+ H S PS+ + P+++S+IL LCK G L+ A+++LN T S ++S K Sbjct: 5 LKRQFSR-HASLCLTPSN----SSSAPTKQSRILELCKLGQLTDAIRILNSTHSSEISAK 59 Query: 259 PVIFASLLQTCIKALSFTHGLQIHSYVIKSGLELDRYVGNSLLSMYFKLGPDFSDTQKVF 438 ++ASLLQTC K SF HGLQ H++V+KSGLE DR VGNSLLS+YFKLGPD +T++VF Sbjct: 60 SNLYASLLQTCRKVFSFIHGLQFHAHVVKSGLETDRNVGNSLLSLYFKLGPDMRETRRVF 119 Query: 439 DNLFEKDVISWTSMISGCIRAGKPKESLEIFWEMLGHDVEPNAFTLSAVIKACSEIGALR 618 D +F KD ISWTSM+SG + + + ++LE+F EM+ ++PN FTLS+ +KAC E+G +R Sbjct: 120 DGMFVKDAISWTSMMSGYVASKEHVKALEVFVEMVSFGLQPNKFTLSSAVKACFELGEVR 179 Query: 619 LG 624 LG Sbjct: 180 LG 181 Score = 67.4 bits (163), Expect = 4e-09 Identities = 36/119 (30%), Positives = 69/119 (57%) Frame = +1 Query: 268 FASLLQTCIKALSFTHGLQIHSYVIKSGLELDRYVGNSLLSMYFKLGPDFSDTQKVFDNL 447 F ++L C G +IH +I +G+ + V +SLL MY K G + ++VF+ + Sbjct: 267 FGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKSG-SVREARQVFNGM 325 Query: 448 FEKDVISWTSMISGCIRAGKPKESLEIFWEMLGHDVEPNAFTLSAVIKACSEIGALRLG 624 K+++SW++++ G + G+ ++++E+F EM E + + V+KAC+ + A+RLG Sbjct: 326 PRKNIVSWSALLGGYCQNGEHEKAIEMFREM----EEKDLYCFGTVLKACAGLAAVRLG 380 >ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540-like [Cucumis sativus] gi|449493172|ref|XP_004159212.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540-like [Cucumis sativus] Length = 605 Score = 189 bits (479), Expect = 8e-46 Identities = 103/182 (56%), Positives = 127/182 (69%), Gaps = 1/182 (0%) Frame = +1 Query: 82 MRLFSKCHYSSISLPSSILQETQQNPSRESKILHLCKSGSLSQALQLLNFTGSQKLSV-K 258 M LF K H SS S S + + + S+IL CKSG L+ AL LLN + K Sbjct: 1 MMLFLKRHCSS-SFTSQNFKYSTHPSIKLSQILQFCKSGLLNDALHLLNSIDLYDSRINK 59 Query: 259 PVIFASLLQTCIKALSFTHGLQIHSYVIKSGLELDRYVGNSLLSMYFKLGPDFSDTQKVF 438 P+++ASLLQTCIK SFT G Q H++V+KSGLE DR+VGNSLLS+YFKLG D T++VF Sbjct: 60 PLLYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVF 119 Query: 439 DNLFEKDVISWTSMISGCIRAGKPKESLEIFWEMLGHDVEPNAFTLSAVIKACSEIGALR 618 D LF KDV+SW SMI+G +R GK ++E+FW+ML +EPN FTLSAVIKACSEIG L Sbjct: 120 DGLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLV 179 Query: 619 LG 624 LG Sbjct: 180 LG 181 Score = 62.0 bits (149), Expect = 1e-07 Identities = 42/177 (23%), Positives = 82/177 (46%) Frame = +1 Query: 79 LMRLFSKCHYSSISLPSSILQETQQNPSRESKILHLCKSGSLSQALQLLNFTGSQKLSVK 258 L+ ++ KC S + + S + + C +G +A+ L + V Sbjct: 305 LVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFR----EMKEVD 360 Query: 259 PVIFASLLQTCIKALSFTHGLQIHSYVIKSGLELDRYVGNSLLSMYFKLGPDFSDTQKVF 438 F ++++ C + T G +IH I+ G D V ++L+ +Y K G + +VF Sbjct: 361 LYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGC-INFAYRVF 419 Query: 439 DNLFEKDVISWTSMISGCIRAGKPKESLEIFWEMLGHDVEPNAFTLSAVIKACSEIG 609 D + +++I+W SMI G + G +++IF M+ ++P+ + ++ ACS G Sbjct: 420 DRMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTG 476 Score = 61.6 bits (148), Expect = 2e-07 Identities = 34/119 (28%), Positives = 65/119 (54%), Gaps = 1/119 (0%) Frame = +1 Query: 271 ASLLQTCIKALSFTHGLQIHSYVIKSGLELDRYVGNSLLSMYFKLGPDFSDTQKVFDNLF 450 +++++ C + + G H V++ G + + + +SL+ MY + SD +++FD L Sbjct: 166 SAVIKACSEIGNLVLGKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVS-SDARQLFDELL 224 Query: 451 EKDVISWTSMISGCIRAGKPKESLEIFW-EMLGHDVEPNAFTLSAVIKACSEIGALRLG 624 E D + WT++IS R +E+L F+ + H + P+ +T +V+ AC +G LR G Sbjct: 225 EPDPVCWTTVISAFTRNDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQG 283 >ref|NP_171853.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|75180299|sp|Q9LR69.1|PPR8_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g03540 gi|9280645|gb|AAF86514.1|AC002560_7 F21B7.16 [Arabidopsis thaliana] gi|91805735|gb|ABE65596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|332189463|gb|AEE27584.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 609 Score = 183 bits (464), Expect = 4e-44 Identities = 92/182 (50%), Positives = 131/182 (71%) Frame = +1 Query: 79 LMRLFSKCHYSSISLPSSILQETQQNPSRESKILHLCKSGSLSQALQLLNFTGSQKLSVK 258 L R FS+ ++S+ L SI + P+++S+IL LCK G L++A+++LN T S ++ Sbjct: 6 LKRHFSQ--HASLCLTPSI---SSSAPTKQSRILELCKLGQLTEAIRILNSTHSSEIPAT 60 Query: 259 PVIFASLLQTCIKALSFTHGLQIHSYVIKSGLELDRYVGNSLLSMYFKLGPDFSDTQKVF 438 P ++ASLLQTC K SF HG+Q H++V+KSGLE DR VGNSLLS+YFKLGP +T++VF Sbjct: 61 PKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVF 120 Query: 439 DNLFEKDVISWTSMISGCIRAGKPKESLEIFWEMLGHDVEPNAFTLSAVIKACSEIGALR 618 D F KD ISWTSM+SG + + ++LE+F EM+ ++ N FTLS+ +KACSE+G +R Sbjct: 121 DGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVR 180 Query: 619 LG 624 LG Sbjct: 181 LG 182 Score = 68.2 bits (165), Expect = 2e-09 Identities = 37/119 (31%), Positives = 69/119 (57%) Frame = +1 Query: 268 FASLLQTCIKALSFTHGLQIHSYVIKSGLELDRYVGNSLLSMYFKLGPDFSDTQKVFDNL 447 F ++L C G +IH +I +G+ + V +SLL MY K G + ++VF+ + Sbjct: 268 FGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCG-SVREARQVFNGM 326 Query: 448 FEKDVISWTSMISGCIRAGKPKESLEIFWEMLGHDVEPNAFTLSAVIKACSEIGALRLG 624 +K+ +SW++++ G + G+ ++++EIF EM E + + V+KAC+ + A+RLG Sbjct: 327 SKKNSVSWSALLGGYCQNGEHEKAIEIFREM----EEKDLYCFGTVLKACAGLAAVRLG 381 >ref|XP_004488287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540-like isoform X1 [Cicer arietinum] gi|502086668|ref|XP_004488288.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540-like isoform X2 [Cicer arietinum] gi|502086671|ref|XP_004488289.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540-like isoform X3 [Cicer arietinum] Length = 612 Score = 182 bits (462), Expect = 8e-44 Identities = 94/154 (61%), Positives = 118/154 (76%), Gaps = 2/154 (1%) Frame = +1 Query: 169 SKILHLCKSGSLSQALQLLNFTGSQKLSVKPVIFASLLQTCIKALSFTHGLQIHSYVIKS 348 S+IL L K+G LS+++ LLN T LS+KPVI+ASLLQTC+K SF HG +H++VIKS Sbjct: 23 SQILQLLKNGELSESIHLLN-TSQPPLSLKPVIYASLLQTCVKTSSFLHGTSVHAHVIKS 81 Query: 349 GLELDRYVGNSLLSMYFKL--GPDFSDTQKVFDNLFEKDVISWTSMISGCIRAGKPKESL 522 GL DR+VGNSLL++YFKL GP S +K+FD+L KDVISWTS+ISG RAG P+ SL Sbjct: 82 GLHSDRFVGNSLLTLYFKLSPGPHLSQARKLFDSLSIKDVISWTSLISGYTRAGLPRHSL 141 Query: 523 EIFWEMLGHDVEPNAFTLSAVIKACSEIGALRLG 624 +F +ML ++PNAFTLS+VIKACSE G L LG Sbjct: 142 SLFNQMLAFPIQPNAFTLSSVIKACSETGDLNLG 175 Score = 68.6 bits (166), Expect = 2e-09 Identities = 36/119 (30%), Positives = 67/119 (56%) Frame = +1 Query: 268 FASLLQTCIKALSFTHGLQIHSYVIKSGLELDRYVGNSLLSMYFKLGPDFSDTQKVFDNL 447 F +L+ C + HG ++H ++ G D + ++L+ +Y K G ++VF ++ Sbjct: 359 FGIILRACSGLAAVNHGKEVHCRYVRKGGWKDVIIESALVDLYAKCGT-VDLARRVFVSM 417 Query: 448 FEKDVISWTSMISGCIRAGKPKESLEIFWEMLGHDVEPNAFTLSAVIKACSEIGALRLG 624 +++I+W SMISG + G+ E+L +F +M+ ++P+ TL AV+ ACS G + G Sbjct: 418 EVRNLITWNSMISGFAQNGRGVEALALFEDMIKEGIKPDCITLVAVLFACSHAGLVDEG 476 Score = 63.5 bits (153), Expect = 5e-08 Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 4/149 (2%) Frame = +1 Query: 190 KSGSLSQALQLLNFTGSQKLSVKPVIFASLLQTCIKALSFTHGLQIHSYVIKSGLELDRY 369 ++G +L L N + + +S+++ C + G H+ VI G + + Sbjct: 133 RAGLPRHSLSLFNQMLAFPIQPNAFTLSSVIKACSETGDLNLGKTFHAIVISRGFDSNHV 192 Query: 370 VGNSLLSMYFKLGPDFSDTQKVFDNLFEKD-VISWTSMISGCIRAGKPKESLEIFWEMLG 546 V SL+ MY D +KVF+ + E+D V+ WTS+IS R KE+LE F M Sbjct: 193 VSCSLIDMY-GWNRAVEDARKVFEEMPERDDVVCWTSIISSFTRNDMFKEALESFLVM-- 249 Query: 547 HDV---EPNAFTLSAVIKACSEIGALRLG 624 H V P+ FT ++ AC+ +G LR G Sbjct: 250 HRVCGLIPDGFTFGTLLSACANLGLLRQG 278 >ref|XP_003595526.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355484574|gb|AES65777.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 229 Score = 164 bits (415), Expect = 2e-38 Identities = 86/154 (55%), Positives = 114/154 (74%), Gaps = 2/154 (1%) Frame = +1 Query: 136 LQETQQNPSRESKILHLCKSGSLSQALQLLNFTGSQKLSVKPVIFASLLQTCIKALSFTH 315 +++T S +S+ILH K+GSLS A+ LLN T LS+KPVI+ASLLQT +K SF H Sbjct: 10 VKQTHSFISTDSEILHHLKTGSLSHAIHLLN-TSQPTLSLKPVIYASLLQTSVKTNSFHH 68 Query: 316 GLQIHSYVIKSGLELDRYVGNSLLSMYFKL--GPDFSDTQKVFDNLFEKDVISWTSMISG 489 G +H++V+KSGL DR+VGNSLL++YFKL GP S + +FD+L KDVISWTS+ISG Sbjct: 69 GASVHAHVLKSGLHSDRFVGNSLLTLYFKLNPGPHLSHARHLFDSLHVKDVISWTSLISG 128 Query: 490 CIRAGKPKESLEIFWEMLGHDVEPNAFTLSAVIK 591 R+ P +S+ +F+EML V+PNAFTLS+VIK Sbjct: 129 YTRSDLPHQSISLFYEMLAFPVQPNAFTLSSVIK 162 >ref|XP_003535018.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540-like [Glycine max] Length = 611 Score = 160 bits (406), Expect = 2e-37 Identities = 84/157 (53%), Positives = 115/157 (73%), Gaps = 1/157 (0%) Frame = +1 Query: 157 PSR-ESKILHLCKSGSLSQALQLLNFTGSQKLSVKPVIFASLLQTCIKALSFTHGLQIHS 333 PSR ES+ILH CK G+L +AL LL +Q ++KPV++ASLLQ C KA SF G +H+ Sbjct: 19 PSRTESQILHHCKLGALPKALILLK-AQAQAQALKPVVYASLLQACRKAHSFPLGTHLHA 77 Query: 334 YVIKSGLELDRYVGNSLLSMYFKLGPDFSDTQKVFDNLFEKDVISWTSMISGCIRAGKPK 513 +V+KSG DR+V NSLLS+Y KL P FS + +FD L KDVI+WTS+ISG ++ +PK Sbjct: 78 HVLKSGFLADRFVANSLLSLYSKLSPHFSQARALFDALPFKDVIAWTSIISGHVQKAQPK 137 Query: 514 ESLEIFWEMLGHDVEPNAFTLSAVIKACSEIGALRLG 624 ++ +F +MLG +EPNAFTLS+++KACS++ L LG Sbjct: 138 TAVHLFLQMLGQAIEPNAFTLSSILKACSQLENLHLG 174 Score = 60.5 bits (145), Expect = 4e-07 Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 1/147 (0%) Frame = +1 Query: 187 CKSGSLSQALQLLNFTGSQKLSVKPVIFASLLQTCIKALSFTHGLQIHSYVIKSGLELDR 366 C +G L L+ S V F ++++ C + G ++H ++ G D Sbjct: 336 CHNGECGSVLGLVREWRSM---VDVYSFGTIIRACSGLAAVRQGNEVHCQYVRRGGWRDV 392 Query: 367 YVGNSLLSMYFKLGP-DFSDTQKVFDNLFEKDVISWTSMISGCIRAGKPKESLEIFWEML 543 V ++L+ +Y K G DF+ ++F + +++I+W +MI G + G+ +E +E+F EM+ Sbjct: 393 VVESALVDLYAKCGSVDFA--YRLFSRMEARNLITWNAMIGGFAQNGRGQEGVELFEEMV 450 Query: 544 GHDVEPNAFTLSAVIKACSEIGALRLG 624 V P+ + V+ ACS G + G Sbjct: 451 KEGVRPDWISFVNVLFACSHNGLVDQG 477 Score = 59.7 bits (143), Expect = 7e-07 Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 5/130 (3%) Frame = +1 Query: 250 SVKPVIF--ASLLQTCIKALSFTHGLQIHSYVIKSGLELDR-YVGNSLLSMYFKLGPDFS 420 +++P F +S+L+ C + + G +H+ V G + V +L+ MY + Sbjct: 150 AIEPNAFTLSSILKACSQLENLHLGKTLHAVVFIRGFHSNNNVVACALIDMYGR-SRVVD 208 Query: 421 DTQKVFDNLFEKDVISWTSMISGCIRAGKPKESLEIFWEML--GHDVEPNAFTLSAVIKA 594 D +KVFD L E D + WT++IS R + +E++ +F+ M G +E + FT ++ A Sbjct: 209 DARKVFDELPEPDYVCWTAVISTLARNDRFREAVRVFFAMHDGGLGLEVDGFTFGTLLNA 268 Query: 595 CSEIGALRLG 624 C +G LR+G Sbjct: 269 CGNLGWLRMG 278