BLASTX nr result

ID: Cocculus23_contig00031061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00031061
         (269 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282909.2| PREDICTED: glutamate receptor 2.7-like [Viti...    57   4e-06
emb|CAN64963.1| hypothetical protein VITISV_002891 [Vitis vinifera]    47   4e-06

>ref|XP_002282909.2| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera]
          Length = 1452

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 36/82 (43%), Positives = 44/82 (53%)
 Frame = -3

Query: 246 KKCTWYLLRVFLITLGKFASLRKYYVVSNRSTSAGNIFLLLYVXXXXXXXXXXXXIAELK 67
           KK    LL V L+   KF     +++VSN+    G I LLLYV            I ELK
Sbjct: 255 KKSICNLLLVSLLNQTKFVIFDVHFMVSNKPHVLGTILLLLYVDDMIITGDDLSGIQELK 314

Query: 66  LALTHRFEMKDLGLLHYFLGIE 1
             L+ +FEMKDLG L YFLG+E
Sbjct: 315 DFLSQQFEMKDLGHLSYFLGLE 336


>emb|CAN64963.1| hypothetical protein VITISV_002891 [Vitis vinifera]
          Length = 1318

 Score = 47.0 bits (110), Expect(2) = 4e-06
 Identities = 27/53 (50%), Positives = 31/53 (58%)
 Frame = -3

Query: 159  RSTSAGNIFLLLYVXXXXXXXXXXXXIAELKLALTHRFEMKDLGLLHYFLGIE 1
            R T  G I LLLYV            I ELK  L+ +FEMKDLG L+YFLG+E
Sbjct: 991  RRTDKGTILLLLYVDDMIITGDDLSGIQELKDFLSQQFEMKDLGHLNYFLGLE 1043



 Score = 29.3 bits (64), Expect(2) = 4e-06
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = -2

Query: 268 FLNGELKEEVYMVSPSGV 215
           FLNG+L EEVYM  P G+
Sbjct: 946 FLNGDLSEEVYMQPPPGL 963


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