BLASTX nr result
ID: Cocculus23_contig00030853
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00030853
(382 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFJ64569.1| retinoblastoma-related protein 1 [Brassica rapa] 75 4e-23
gb|AFJ64577.1| retinoblastoma-related protein 1a [Brassica rapa] 75 4e-23
gb|AFJ64574.1| retinoblastoma-related protein 2 [Brassica juncea] 71 4e-22
ref|XP_007220909.1| hypothetical protein PRUPE_ppa000710mg [Prun... 80 3e-13
ref|XP_007201203.1| hypothetical protein PRUPE_ppa001995mg [Prun... 80 3e-13
ref|XP_006594366.1| PREDICTED: retinoblastoma-related protein 1-... 80 4e-13
ref|XP_004307078.1| PREDICTED: retinoblastoma-related protein-li... 80 4e-13
ref|XP_003522419.1| PREDICTED: retinoblastoma-related protein 1-... 80 4e-13
ref|XP_004511054.1| PREDICTED: retinoblastoma-related protein 1-... 79 7e-13
ref|XP_006296912.1| hypothetical protein CARUB_v10012904mg [Caps... 79 7e-13
gb|AEN81824.1| AT3G12280-like protein, partial [Neslia paniculata] 79 7e-13
gb|AEN81818.1| AT3G12280-like protein, partial [Capsella grandif... 79 7e-13
gb|AEN81815.1| AT3G12280-like protein, partial [Capsella grandif... 79 7e-13
gb|AEN81814.1| AT3G12280-like protein, partial [Capsella grandif... 79 7e-13
ref|XP_002884896.1| hypothetical protein ARALYDRAFT_478590 [Arab... 79 7e-13
ref|XP_002529988.1| conserved hypothetical protein [Ricinus comm... 79 7e-13
gb|EXB62676.1| Retinoblastoma-related protein [Morus notabilis] 79 9e-13
ref|XP_006598087.1| PREDICTED: retinoblastoma-related protein 1-... 78 1e-12
ref|XP_006465771.1| PREDICTED: retinoblastoma-related protein-li... 78 1e-12
ref|XP_006432412.1| hypothetical protein CICLE_v10000128mg [Citr... 78 1e-12
>gb|AFJ64569.1| retinoblastoma-related protein 1 [Brassica rapa]
Length = 1016
Score = 74.7 bits (182), Expect(3) = 4e-23
Identities = 41/61 (67%), Positives = 45/61 (73%)
Frame = +3
Query: 156 SLKLYDRFLEATCKAAGQILQASTLTSLLTNERFQHCMLASSAELVLATPRKMVTMLFPV 335
++KLY R LEA C A QIL A+ L SLLTNERF CMLA SAELVLAT K +TMLFP
Sbjct: 495 AVKLYYRVLEAMCIAEAQILHANNLNSLLTNERFHRCMLACSAELVLAT-HKSITMLFPA 553
Query: 336 V 338
V
Sbjct: 554 V 554
Score = 50.8 bits (120), Expect(3) = 4e-23
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = +2
Query: 5 CDRDISYDVTCSTHILLEAIFPRGALGDRHIAGSLQ 112
CDRDI+ DVT H++LEAIFP +LGDR GSLQ
Sbjct: 443 CDRDITTDVTRRAHVILEAIFPNSSLGDRCAGGSLQ 478
Score = 28.1 bits (61), Expect(3) = 4e-23
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +1
Query: 121 MDSIWAEQRRMEA 159
MD IWAEQRR+EA
Sbjct: 483 MDDIWAEQRRLEA 495
>gb|AFJ64577.1| retinoblastoma-related protein 1a [Brassica rapa]
Length = 992
Score = 74.7 bits (182), Expect(3) = 4e-23
Identities = 41/61 (67%), Positives = 45/61 (73%)
Frame = +3
Query: 156 SLKLYDRFLEATCKAAGQILQASTLTSLLTNERFQHCMLASSAELVLATPRKMVTMLFPV 335
++KLY R LEA C A QIL A+ L SLLTNERF CMLA SAELVLAT K +TMLFP
Sbjct: 495 AVKLYYRVLEAMCIAEAQILHANNLNSLLTNERFHRCMLACSAELVLAT-HKSITMLFPA 553
Query: 336 V 338
V
Sbjct: 554 V 554
Score = 50.8 bits (120), Expect(3) = 4e-23
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = +2
Query: 5 CDRDISYDVTCSTHILLEAIFPRGALGDRHIAGSLQ 112
CDRDI+ DVT H++LEAIFP +LGDR GSLQ
Sbjct: 443 CDRDITTDVTRRAHVILEAIFPNSSLGDRCAGGSLQ 478
Score = 28.1 bits (61), Expect(3) = 4e-23
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +1
Query: 121 MDSIWAEQRRMEA 159
MD IWAEQRR+EA
Sbjct: 483 MDDIWAEQRRLEA 495
>gb|AFJ64574.1| retinoblastoma-related protein 2 [Brassica juncea]
Length = 1016
Score = 71.2 bits (173), Expect(3) = 4e-22
Identities = 40/61 (65%), Positives = 44/61 (72%)
Frame = +3
Query: 156 SLKLYDRFLEATCKAAGQILQASTLTSLLTNERFQHCMLASSAELVLATPRKMVTMLFPV 335
++KL R LEA C A QIL A+ L SLLTNERF CMLA SAELVLAT K +TMLFP
Sbjct: 495 AVKLCYRVLEAMCIAEAQILHANNLNSLLTNERFHRCMLACSAELVLAT-HKSITMLFPA 553
Query: 336 V 338
V
Sbjct: 554 V 554
Score = 50.8 bits (120), Expect(3) = 4e-22
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = +2
Query: 5 CDRDISYDVTCSTHILLEAIFPRGALGDRHIAGSLQ 112
CDRDI+ DVT H++LEAIFP +LGDR GSLQ
Sbjct: 443 CDRDITTDVTRRAHVILEAIFPNSSLGDRCAGGSLQ 478
Score = 28.1 bits (61), Expect(3) = 4e-22
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +1
Query: 121 MDSIWAEQRRMEA 159
MD IWAEQRR+EA
Sbjct: 483 MDDIWAEQRRLEA 495
>ref|XP_007220909.1| hypothetical protein PRUPE_ppa000710mg [Prunus persica]
gi|462417371|gb|EMJ22108.1| hypothetical protein
PRUPE_ppa000710mg [Prunus persica]
Length = 1026
Score = 80.1 bits (196), Expect = 3e-13
Identities = 44/61 (72%), Positives = 47/61 (77%)
Frame = +3
Query: 156 SLKLYDRFLEATCKAAGQILQASTLTSLLTNERFQHCMLASSAELVLATPRKMVTMLFPV 335
+LKLY R LEA C+A QIL A+ LTSLLTNERF CMLA SAELVLAT K VTMLFP
Sbjct: 509 ALKLYYRVLEAMCRAEAQILHATNLTSLLTNERFHRCMLACSAELVLAT-HKTVTMLFPA 567
Query: 336 V 338
V
Sbjct: 568 V 568
>ref|XP_007201203.1| hypothetical protein PRUPE_ppa001995mg [Prunus persica]
gi|462396603|gb|EMJ02402.1| hypothetical protein
PRUPE_ppa001995mg [Prunus persica]
Length = 731
Score = 80.1 bits (196), Expect = 3e-13
Identities = 44/61 (72%), Positives = 47/61 (77%)
Frame = +3
Query: 156 SLKLYDRFLEATCKAAGQILQASTLTSLLTNERFQHCMLASSAELVLATPRKMVTMLFPV 335
+LKLY R LEA C+A QIL A+ LTSLLTNERF CMLA SAELVLAT K VTMLFP
Sbjct: 221 ALKLYYRVLEAICRAEAQILHATNLTSLLTNERFHRCMLACSAELVLAT-HKTVTMLFPA 279
Query: 336 V 338
V
Sbjct: 280 V 280
>ref|XP_006594366.1| PREDICTED: retinoblastoma-related protein 1-like [Glycine max]
Length = 1014
Score = 79.7 bits (195), Expect = 4e-13
Identities = 43/61 (70%), Positives = 47/61 (77%)
Frame = +3
Query: 156 SLKLYDRFLEATCKAAGQILQASTLTSLLTNERFQHCMLASSAELVLATPRKMVTMLFPV 335
+LKLY R LEA C+A Q+L A+ LTSLLTNERF CMLA SAELVLAT K VTMLFP
Sbjct: 500 ALKLYYRVLEAMCRAEAQVLHATNLTSLLTNERFHRCMLACSAELVLAT-HKTVTMLFPA 558
Query: 336 V 338
V
Sbjct: 559 V 559
>ref|XP_004307078.1| PREDICTED: retinoblastoma-related protein-like [Fragaria vesca
subsp. vesca]
Length = 1026
Score = 79.7 bits (195), Expect = 4e-13
Identities = 43/61 (70%), Positives = 47/61 (77%)
Frame = +3
Query: 156 SLKLYDRFLEATCKAAGQILQASTLTSLLTNERFQHCMLASSAELVLATPRKMVTMLFPV 335
+LKLY R LEA C+A Q+L A+ LTSLLTNERF CMLA SAELVLAT K VTMLFP
Sbjct: 508 ALKLYYRVLEAMCRAEAQVLHATNLTSLLTNERFHRCMLACSAELVLAT-HKTVTMLFPA 566
Query: 336 V 338
V
Sbjct: 567 V 567
>ref|XP_003522419.1| PREDICTED: retinoblastoma-related protein 1-like isoform X1
[Glycine max]
Length = 1014
Score = 79.7 bits (195), Expect = 4e-13
Identities = 43/61 (70%), Positives = 47/61 (77%)
Frame = +3
Query: 156 SLKLYDRFLEATCKAAGQILQASTLTSLLTNERFQHCMLASSAELVLATPRKMVTMLFPV 335
+LKLY R LEA C+A Q+L A+ LTSLLTNERF CMLA SAELVLAT K VTMLFP
Sbjct: 500 ALKLYYRVLEAMCRAEAQVLHATNLTSLLTNERFHRCMLACSAELVLAT-HKTVTMLFPA 558
Query: 336 V 338
V
Sbjct: 559 V 559
>ref|XP_004511054.1| PREDICTED: retinoblastoma-related protein 1-like [Cicer arietinum]
Length = 1028
Score = 79.0 bits (193), Expect = 7e-13
Identities = 43/61 (70%), Positives = 47/61 (77%)
Frame = +3
Query: 156 SLKLYDRFLEATCKAAGQILQASTLTSLLTNERFQHCMLASSAELVLATPRKMVTMLFPV 335
+LKLY R LEA C+A Q+L A+ LTSLLTNERF CMLA SAELVLAT K VTMLFP
Sbjct: 502 ALKLYYRVLEAMCRAEAQMLHATNLTSLLTNERFHRCMLACSAELVLAT-HKTVTMLFPA 560
Query: 336 V 338
V
Sbjct: 561 V 561
>ref|XP_006296912.1| hypothetical protein CARUB_v10012904mg [Capsella rubella]
gi|482565621|gb|EOA29810.1| hypothetical protein
CARUB_v10012904mg [Capsella rubella]
Length = 959
Score = 79.0 bits (193), Expect = 7e-13
Identities = 43/61 (70%), Positives = 46/61 (75%)
Frame = +3
Query: 156 SLKLYDRFLEATCKAAGQILQASTLTSLLTNERFQHCMLASSAELVLATPRKMVTMLFPV 335
+LKLY R LEA CKA QIL A+ L SLLTNERF CMLA SAELVLAT K +TMLFP
Sbjct: 495 ALKLYYRVLEAMCKAEAQILHANNLNSLLTNERFHRCMLACSAELVLAT-HKTITMLFPA 553
Query: 336 V 338
V
Sbjct: 554 V 554
>gb|AEN81824.1| AT3G12280-like protein, partial [Neslia paniculata]
Length = 172
Score = 79.0 bits (193), Expect = 7e-13
Identities = 43/61 (70%), Positives = 46/61 (75%)
Frame = +3
Query: 156 SLKLYDRFLEATCKAAGQILQASTLTSLLTNERFQHCMLASSAELVLATPRKMVTMLFPV 335
+LKLY R LEA CKA QIL A+ L SLLTNERF CMLA SAELVLAT K +TMLFP
Sbjct: 81 ALKLYYRVLEAMCKAEAQILHANNLNSLLTNERFHRCMLACSAELVLAT-HKTITMLFPA 139
Query: 336 V 338
V
Sbjct: 140 V 140
>gb|AEN81818.1| AT3G12280-like protein, partial [Capsella grandiflora]
Length = 172
Score = 79.0 bits (193), Expect = 7e-13
Identities = 43/61 (70%), Positives = 46/61 (75%)
Frame = +3
Query: 156 SLKLYDRFLEATCKAAGQILQASTLTSLLTNERFQHCMLASSAELVLATPRKMVTMLFPV 335
+LKLY R LEA CKA QIL A+ L SLLTNERF CMLA SAELVLAT K +TMLFP
Sbjct: 81 ALKLYYRVLEAMCKAEAQILHANNLNSLLTNERFHRCMLACSAELVLAT-HKTITMLFPA 139
Query: 336 V 338
V
Sbjct: 140 V 140
>gb|AEN81815.1| AT3G12280-like protein, partial [Capsella grandiflora]
gi|345290649|gb|AEN81816.1| AT3G12280-like protein,
partial [Capsella grandiflora]
gi|345290651|gb|AEN81817.1| AT3G12280-like protein,
partial [Capsella grandiflora]
gi|345290655|gb|AEN81819.1| AT3G12280-like protein,
partial [Capsella grandiflora]
Length = 172
Score = 79.0 bits (193), Expect = 7e-13
Identities = 43/61 (70%), Positives = 46/61 (75%)
Frame = +3
Query: 156 SLKLYDRFLEATCKAAGQILQASTLTSLLTNERFQHCMLASSAELVLATPRKMVTMLFPV 335
+LKLY R LEA CKA QIL A+ L SLLTNERF CMLA SAELVLAT K +TMLFP
Sbjct: 81 ALKLYYRVLEAMCKAEAQILHANNLNSLLTNERFHRCMLACSAELVLAT-HKTITMLFPA 139
Query: 336 V 338
V
Sbjct: 140 V 140
>gb|AEN81814.1| AT3G12280-like protein, partial [Capsella grandiflora]
gi|345290657|gb|AEN81820.1| AT3G12280-like protein,
partial [Capsella rubella] gi|345290659|gb|AEN81821.1|
AT3G12280-like protein, partial [Capsella rubella]
gi|345290661|gb|AEN81822.1| AT3G12280-like protein,
partial [Capsella rubella] gi|345290663|gb|AEN81823.1|
AT3G12280-like protein, partial [Capsella rubella]
Length = 172
Score = 79.0 bits (193), Expect = 7e-13
Identities = 43/61 (70%), Positives = 46/61 (75%)
Frame = +3
Query: 156 SLKLYDRFLEATCKAAGQILQASTLTSLLTNERFQHCMLASSAELVLATPRKMVTMLFPV 335
+LKLY R LEA CKA QIL A+ L SLLTNERF CMLA SAELVLAT K +TMLFP
Sbjct: 81 ALKLYYRVLEAMCKAEAQILHANNLNSLLTNERFHRCMLACSAELVLAT-HKTITMLFPA 139
Query: 336 V 338
V
Sbjct: 140 V 140
>ref|XP_002884896.1| hypothetical protein ARALYDRAFT_478590 [Arabidopsis lyrata subsp.
lyrata] gi|297330736|gb|EFH61155.1| hypothetical protein
ARALYDRAFT_478590 [Arabidopsis lyrata subsp. lyrata]
Length = 1012
Score = 79.0 bits (193), Expect = 7e-13
Identities = 43/61 (70%), Positives = 46/61 (75%)
Frame = +3
Query: 156 SLKLYDRFLEATCKAAGQILQASTLTSLLTNERFQHCMLASSAELVLATPRKMVTMLFPV 335
+LKLY R LEA CKA QIL A+ L SLLTNERF CMLA SAELVLAT K +TMLFP
Sbjct: 492 ALKLYYRVLEAMCKAEAQILHANNLNSLLTNERFHRCMLACSAELVLAT-HKTITMLFPA 550
Query: 336 V 338
V
Sbjct: 551 V 551
>ref|XP_002529988.1| conserved hypothetical protein [Ricinus communis]
gi|254789790|sp|B9SVG9.1|RBR_RICCO RecName:
Full=Retinoblastoma-related protein
gi|223530511|gb|EEF32393.1| conserved hypothetical
protein [Ricinus communis]
Length = 1020
Score = 79.0 bits (193), Expect = 7e-13
Identities = 44/61 (72%), Positives = 46/61 (75%)
Frame = +3
Query: 156 SLKLYDRFLEATCKAAGQILQASTLTSLLTNERFQHCMLASSAELVLATPRKMVTMLFPV 335
+LKLY R LEA C A QIL A+ LTSLLTNERF CMLA SAELVLAT K VTMLFP
Sbjct: 501 ALKLYYRVLEAMCTAEAQILHATNLTSLLTNERFHRCMLACSAELVLAT-HKTVTMLFPA 559
Query: 336 V 338
V
Sbjct: 560 V 560
>gb|EXB62676.1| Retinoblastoma-related protein [Morus notabilis]
Length = 1037
Score = 78.6 bits (192), Expect = 9e-13
Identities = 43/61 (70%), Positives = 47/61 (77%)
Frame = +3
Query: 156 SLKLYDRFLEATCKAAGQILQASTLTSLLTNERFQHCMLASSAELVLATPRKMVTMLFPV 335
+LKLY R LEA C+A QIL A+ L+SLLTNERF CMLA SAELVLAT K VTMLFP
Sbjct: 506 ALKLYYRVLEAMCRAEAQILHATNLSSLLTNERFHRCMLACSAELVLAT-HKTVTMLFPA 564
Query: 336 V 338
V
Sbjct: 565 V 565
>ref|XP_006598087.1| PREDICTED: retinoblastoma-related protein 1-like [Glycine max]
Length = 1005
Score = 78.2 bits (191), Expect = 1e-12
Identities = 42/61 (68%), Positives = 46/61 (75%)
Frame = +3
Query: 156 SLKLYDRFLEATCKAAGQILQASTLTSLLTNERFQHCMLASSAELVLATPRKMVTMLFPV 335
+LKLY R LEA C+A Q+ A+ LTSLLTNERF CMLA SAELVLAT K VTMLFP
Sbjct: 490 ALKLYYRVLEAMCRAEAQVFHATNLTSLLTNERFHRCMLACSAELVLAT-HKTVTMLFPA 548
Query: 336 V 338
V
Sbjct: 549 V 549
>ref|XP_006465771.1| PREDICTED: retinoblastoma-related protein-like [Citrus sinensis]
Length = 1024
Score = 78.2 bits (191), Expect = 1e-12
Identities = 43/61 (70%), Positives = 45/61 (73%)
Frame = +3
Query: 156 SLKLYDRFLEATCKAAGQILQASTLTSLLTNERFQHCMLASSAELVLATPRKMVTMLFPV 335
+LKLY R LEA C A Q+L A LTSLLTNERF CMLA SAELVLAT K VTMLFP
Sbjct: 504 ALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLAT-HKTVTMLFPA 562
Query: 336 V 338
V
Sbjct: 563 V 563
>ref|XP_006432412.1| hypothetical protein CICLE_v10000128mg [Citrus clementina]
gi|557534534|gb|ESR45652.1| hypothetical protein
CICLE_v10000128mg [Citrus clementina]
Length = 957
Score = 78.2 bits (191), Expect = 1e-12
Identities = 43/61 (70%), Positives = 45/61 (73%)
Frame = +3
Query: 156 SLKLYDRFLEATCKAAGQILQASTLTSLLTNERFQHCMLASSAELVLATPRKMVTMLFPV 335
+LKLY R LEA C A Q+L A LTSLLTNERF CMLA SAELVLAT K VTMLFP
Sbjct: 437 ALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLAT-HKTVTMLFPA 495
Query: 336 V 338
V
Sbjct: 496 V 496